Metagenome / Metatranscriptome Family F073806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	92 residues
Representative Sequence	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Number of Associated Samples	111
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.00 %
% of genes near scaffold ends (potentially truncated)	38.33 %
% of genes from short scaffolds (< 2000 bps)	76.67 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (29.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.65% β-sheet: 8.70% Coil/Unstructured: 55.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00313	CSD	10.83
PF07726	AAA_3	2.50
PF02900	LigB	2.50
PF01882	DUF58	1.67
PF11638	DnaA_N	1.67
PF13559	DUF4129	1.67
PF08299	Bac_DnaA_C	1.67
PF07883	Cupin_2	0.83
PF01068	DNA_ligase_A_M	0.83
PF08592	Anthrone_oxy	0.83
PF01425	Amidase	0.83
PF00528	BPD_transp_1	0.83
PF00892	EamA	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	1.67
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	1.67
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.83
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.83
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	82.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	82.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	82.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	71.67 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	71.67 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102895290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	872	Open in IMG/M
3300001661\|JGI12053J15887_10261326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	857	Open in IMG/M
3300003994\|Ga0055435_10026713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1269	Open in IMG/M
3300004137\|Ga0058883_1123890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300004145\|Ga0055489_10095842	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300004463\|Ga0063356_100134861	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2775	Open in IMG/M
3300004479\|Ga0062595_100907113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	743	Open in IMG/M
3300005204\|Ga0068997_10014256	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1216	Open in IMG/M
3300005294\|Ga0065705_10515588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300005294\|Ga0065705_11069346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300005295\|Ga0065707_10227578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1201	Open in IMG/M
3300005530\|Ga0070679_101223520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300005536\|Ga0070697_101608710	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300005545\|Ga0070695_100311278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1167	Open in IMG/M
3300005549\|Ga0070704_100021760	All Organisms → cellular organisms → Bacteria	4163	Open in IMG/M
3300005937\|Ga0081455_10297038	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1160	Open in IMG/M
3300006047\|Ga0075024_100433584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300006176\|Ga0070765_100547578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1089	Open in IMG/M
3300006845\|Ga0075421_100122598	All Organisms → cellular organisms → Bacteria	3262	Open in IMG/M
3300006847\|Ga0075431_100787285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	925	Open in IMG/M
3300007255\|Ga0099791_10348046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300009038\|Ga0099829_10000147	All Organisms → cellular organisms → Bacteria	34884	Open in IMG/M
3300009078\|Ga0105106_11174717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300009089\|Ga0099828_10164678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1966	Open in IMG/M
3300009090\|Ga0099827_10102967	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2273	Open in IMG/M
3300009090\|Ga0099827_10287556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1388	Open in IMG/M
3300009090\|Ga0099827_10641265	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	917	Open in IMG/M
3300009147\|Ga0114129_10083366	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4441	Open in IMG/M
3300009153\|Ga0105094_10348434	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	855	Open in IMG/M
3300009166\|Ga0105100_10629899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300010048\|Ga0126373_11491100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	742	Open in IMG/M
3300010360\|Ga0126372_10152724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1848	Open in IMG/M
3300010360\|Ga0126372_12977241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300010400\|Ga0134122_10056317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3029	Open in IMG/M
3300011270\|Ga0137391_10000144	All Organisms → cellular organisms → Bacteria	46260	Open in IMG/M
3300011406\|Ga0137454_1024454	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	840	Open in IMG/M
3300011419\|Ga0137446_1057104	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300011436\|Ga0137458_1199524	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300012174\|Ga0137338_1028141	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1132	Open in IMG/M
3300012355\|Ga0137369_10312656	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1161	Open in IMG/M
3300012360\|Ga0137375_10410388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1180	Open in IMG/M
3300012929\|Ga0137404_11838437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300012930\|Ga0137407_10566996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1064	Open in IMG/M
3300014308\|Ga0075354_1003014	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2059	Open in IMG/M
3300014318\|Ga0075351_1098354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300014873\|Ga0180066_1009010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1677	Open in IMG/M
3300014882\|Ga0180069_1118911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300014884\|Ga0180104_1003037	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300015053\|Ga0137405_1070729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1144	Open in IMG/M
3300015241\|Ga0137418_10877087	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300015264\|Ga0137403_10002380	All Organisms → cellular organisms → Bacteria	23054	Open in IMG/M
3300018000\|Ga0184604_10069828	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1022	Open in IMG/M
3300018028\|Ga0184608_10099208	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1215	Open in IMG/M
3300018031\|Ga0184634_10011004	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3220	Open in IMG/M
3300018061\|Ga0184619_10071820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1530	Open in IMG/M
3300018063\|Ga0184637_10003191	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	10306	Open in IMG/M
3300018068\|Ga0184636_1078540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1110	Open in IMG/M
3300018074\|Ga0184640_10025263	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2311	Open in IMG/M
3300018082\|Ga0184639_10293834	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	854	Open in IMG/M
3300018422\|Ga0190265_10010192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7011	Open in IMG/M
3300018422\|Ga0190265_10016686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5730	Open in IMG/M
3300018429\|Ga0190272_10152389	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1594	Open in IMG/M
3300019249\|Ga0184648_1514272	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300019360\|Ga0187894_10132195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1290	Open in IMG/M
3300019458\|Ga0187892_10260773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	885	Open in IMG/M
3300019789\|Ga0137408_1233152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5828	Open in IMG/M
3300019789\|Ga0137408_1262243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2009	Open in IMG/M
3300019881\|Ga0193707_1003560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5575	Open in IMG/M
3300019882\|Ga0193713_1014326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2382	Open in IMG/M
3300020004\|Ga0193755_1003755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4833	Open in IMG/M
3300020067\|Ga0180109_1027532	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300020068\|Ga0184649_1061472	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300020580\|Ga0210403_10115972	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300020581\|Ga0210399_10008570	All Organisms → cellular organisms → Bacteria	7996	Open in IMG/M
3300021090\|Ga0210377_10062483	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300021178\|Ga0210408_10487662	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300021951\|Ga0222624_1558578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300022534\|Ga0224452_1041073	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300022694\|Ga0222623_10105688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1095	Open in IMG/M
3300025324\|Ga0209640_10933345	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300025535\|Ga0207423_1021927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1053	Open in IMG/M
3300025917\|Ga0207660_10213667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1511	Open in IMG/M
3300025959\|Ga0210116_1057914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	746	Open in IMG/M
3300026102\|Ga0208914_1052465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300026285\|Ga0209438_1039575	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1560	Open in IMG/M
3300026354\|Ga0257180_1013798	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300026358\|Ga0257166_1014647	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300026507\|Ga0257165_1024262	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300026535\|Ga0256867_10004907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5844	Open in IMG/M
3300027650\|Ga0256866_1129061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300027875\|Ga0209283_10004561	All Organisms → cellular organisms → Bacteria	7918	Open in IMG/M
3300027882\|Ga0209590_10300800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1030	Open in IMG/M
3300027909\|Ga0209382_10106398	All Organisms → cellular organisms → Bacteria	3282	Open in IMG/M
3300027915\|Ga0209069_10480460	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300027979\|Ga0209705_10270520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	872	Open in IMG/M
3300028047\|Ga0209526_10491688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	801	Open in IMG/M
3300028722\|Ga0307319_10222128	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300028792\|Ga0307504_10201399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	706	Open in IMG/M
3300028803\|Ga0307281_10049402	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1318	Open in IMG/M
3300028812\|Ga0247825_11434078	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300028828\|Ga0307312_10367192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	943	Open in IMG/M
3300028878\|Ga0307278_10409114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300028906\|Ga0308309_10466337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1089	Open in IMG/M
3300030006\|Ga0299907_10301627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1306	Open in IMG/M
3300030006\|Ga0299907_10800750	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300030619\|Ga0268386_10781699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	612	Open in IMG/M
3300030990\|Ga0308178_1024755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	982	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1010682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1844	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10012657	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
(restricted) 3300031237\|Ga0255334_1007101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1775	Open in IMG/M
(restricted) 3300031237\|Ga0255334_1007736	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300031422\|Ga0308186_1034117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300031455\|Ga0307505_10568402	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	550	Open in IMG/M
3300031720\|Ga0307469_10129361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1845	Open in IMG/M
3300031740\|Ga0307468_100717920	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300031740\|Ga0307468_101862451	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300031820\|Ga0307473_11090337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300031949\|Ga0214473_11231248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	773	Open in IMG/M
3300033233\|Ga0334722_10851512	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300034643\|Ga0370545_003499	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.00%
Host-Associated	Host-Associated	5.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	28.33%
Plants	Host-Associated → Plants	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.00%
Sediment	Environmental → Aquatic → Sediment	15.83%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Marine	Environmental → Aquatic → Marine	4.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.33%
Cave	Environmental → Terrestrial → Cave	1.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.83%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.17%
Sand	Environmental → Terrestrial → Soil → Sand	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.50%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.17%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.17%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.33%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.50%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.83%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.83%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026102	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031237 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_35cm_T3_129	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1028952902	3300000956	Soil	MTYTTEEFVRRAILGILRKDKYRGRFVCLTCLVTMTLESLHPGWRKSEIARARDKVYAAPGIPMESRASFLCAHCRKTMPCLRAPYL*
JGI12053J15887_102613262	3300001661	Forest Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRHVKPGLGSPYL*
Ga0055435_100267132	3300003994	Natural And Restored Wetlands	MTYTTEEFVRRSLHRILRGVKYRNSFLCLPCLVTLTRESLHPGWRPSEITRAMDKVYSSPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0058883_11238902	3300004137	Forest Soil	MTATTYTTEELVRHSLNRILRGAKYKNRFLCLTCLVAMTLEDLHPGWRKSEIGRALEKVHAAPGIPMESRAAFLCAHCRNVKPCLGSPYL*
Ga0055489_100958421	3300004145	Natural And Restored Wetlands	MTYTTEEFVRRAIVGILRKDKYRGRFVCLTCLVTMTLESLHPGWRKSEIARAMDKVYAAPGIPMESRASFLCAHCRKTMPCLGAPYL*
Ga0063356_1001348611	3300004463	Arabidopsis Thaliana Rhizosphere	MTYTTEEFVRHSLRRTLRSVRYRNSFLCLPCLVTMTLGSLHPGWRPSEITRALDRIYAAPGVPMESRPAFRCAHCRSVKPCLGSPYL*
Ga0062595_1009071131	3300004479	Soil	FVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRSSEIARALDKVYAAPGVPMESRAAVRCAACRTVKPGLGSPYL*
Ga0068997_100142562	3300005204	Natural And Restored Wetlands	MTYTTEEFVRRSLHRTLRSVKYRNSFLCLPCLVTLTLESLHPGWRPSEITRAVDKIYSAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0065705_105155882	3300005294	Switchgrass Rhizosphere	MTYTTEEFVRHSLQRILRGVKYRNRFLCLPCLVTMTLERLHPGWRPTEIARALDRVYAAPGVPIESRAAFRCAACRAVKPCLGSPYL*
Ga0065705_110693461	3300005294	Switchgrass Rhizosphere	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRSSEIARALEKVYAAPGVPMESRAAVRCAACRNVKPGLGSPYL*
Ga0065707_102275781	3300005295	Switchgrass Rhizosphere	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRSSEIARALDKVYAAPGVPMESRAAVRCAACRNVKPGLGSPYL*
Ga0070679_1012235201	3300005530	Corn Rhizosphere	FRAMTYTTEEFVRHSLRRILRSVRYRNSFLCLPCLVTMTLGSLHAGWRPSEITRALDRIYAAPGVPMESRPAFRCAHCRSVKPCLGSPYL*
Ga0070697_1016087102	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRSSEIARALDKVYAAPGVPMESRAAFRCAACRNVKPCLGSPYL*
Ga0070695_1003112781	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PHARATQRSRAPRSSRALGEGEEGAMTYATEDFVRRAILGIFRRRNYRGRFVCLTCLVTMTLESLHRGWRKSEIARAMDKVYAAPGIPMESRTSSLCAHCRKTMPCLGAPNL*
Ga0070704_1000217607	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAFRCAACRTVKPCLGSPYL*
Ga0081455_102970384	3300005937	Tabebuia Heterophylla Rhizosphere	MTYKTEDFVRRAIVGILRRNNYRGRFVCLTCLVTMTLESLHRGWRKSEIALAMDKVYLAPGVPVESRASSLCAHCQK
Ga0075024_1004335842	3300006047	Watersheds	MTYTTGGFVRRALLGILRRKIYRNRFVCLTCLVAMTLESLHPGWRTSEIARALDEVHGAPGMPMESRALFECAHCHKTQPCLGAPVPSL*
Ga0070765_1005475783	3300006176	Soil	MTYTTEEFARRAVVGILRKDKYRGRVVCLTCLVTMTLESLHSGWRKSEIARAVDKVYAAPGIPMESRASFLCAHCRKTMPCLGAPYL*
Ga0075421_1001225981	3300006845	Populus Rhizosphere	LHRTLRSVKYRNSFLCLPCLVTMTLENLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0075431_1007872851	3300006847	Populus Rhizosphere	MTYTTEEFVRHSLHRTLRSVKYRNSFLCLPCLVTMTLENLHPGWRPSEITRALDRIYAAPAVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0099791_103480461	3300007255	Vadose Zone Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALEKVYAAPGVPMESRAAVRCAACRNVKPCLGSPYL*
Ga0099829_1000014722	3300009038	Vadose Zone Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0105106_111747171	3300009078	Freshwater Sediment	MKCRRAITRFLPPMIVPLARLTLASPLRGGAYSVDGQASDSCAMTYTTEEFVRHSLQRILRSVKYRNTFVCLPCLVAMTLERLHPGWRPSEITRAMERVYAAPGVPMESRVAFRCAACRSVKPCLGSPYL*
Ga0099828_101646783	3300009089	Vadose Zone Soil	MTYTTEEFVRRAILGILRRDNYRGRFVCLTCLVTKTLESLHRGWRKSEITRAMDKVYAAPGIPLESRASFLCAHCRKTIPCLGAPYR*
Ga0099827_101029671	3300009090	Vadose Zone Soil	MTYTTEDFVRRAILGILCRGNYRGRFVCLTCLVRMTLESLHRGWRKSEITQAMDKVYAAPGIPLESRASFLCAHCRKTMPCLGAAYR*
Ga0099827_102875562	3300009090	Vadose Zone Soil	MTYTTEDFIRRAILGILHRDNYRGRFLCLTCLVTMSLESLHRGWRKSEITRAMDKVYAAPSIPMESRASFLCAHCGKTRPCLGAPYL*
Ga0099827_106412651	3300009090	Vadose Zone Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHRGWRPSEIARALDKVYAAPGVPMESRAAFRCAACRNVKPCLGSPYL*
Ga0114129_100833667	3300009147	Populus Rhizosphere	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRNVKPGLGSPYL*
Ga0105094_103484342	3300009153	Freshwater Sediment	MIVPLARLTLASPLRGGAYSVDGQASDSCAMTYTTEEFVRHSLQRILRSVKYRNTFVCLPCLVAMTLERLHPGWRPSEITRAMERVYAAPGVPMESRVAFRCAACRSVKPCLGSPYL*
Ga0105100_106298992	3300009166	Freshwater Sediment	MIVSLARLTLASPPRGGAYFVEMAYTTEEFVRHSLQRILRSVRYRNTFVCLPCLVAMTLESLHPGWRPSEITRAMDRVYATPGVPMESRPAFRCAACRTVKPCLGSPYL*
Ga0126373_114911001	3300010048	Tropical Forest Soil	TVEGPMTTEDFVRRALVGILRRSSHLDRFVCLTCLVTMTLESLHRGWRKSEISRAMDRVYETPGVLMESRASSSCAHCRKMMPCLGNRHSAGL*
Ga0126372_101527242	3300010360	Tropical Forest Soil	VGEEEGAMTYTTEEFVRRAILGILRKDKYRGRFVCLTCLVTITLESLHPGWRKSEIARAMDKVYAAPGIPIESTASFLCAHCRKTMPCIGAPYL*
Ga0126372_129772412	3300010360	Tropical Forest Soil	MTYTTEEFVRRALHGILRRDRYRNRFLCLTCLVTMTQESLHPGWRRSEIVRAMDKIYAAPGIPMESRAASLCAHCRKMKPCLGAPYL*
Ga0134122_100563175	3300010400	Terrestrial Soil	MTYTTEEFVRHSLRRILRSVRYRNSFLCLPCLVTMTLGSLHAGWRPSEITRALDRIYAAPGVPMESRPAFRCAHCRNVKPCLGSPYL*
Ga0137391_1000014428	3300011270	Vadose Zone Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAVDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0137454_10244542	3300011406	Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0137446_10571042	3300011419	Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPY
Ga0137458_11995242	3300011436	Soil	MIVPLARLTLASPPRGGAYFVRMTYTTEEFVRHSLQRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0137338_10281413	3300012174	Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPAVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0137369_103126562	3300012355	Vadose Zone Soil	MTYTTEDFVRHSLPRILRSVKYRNTFLCLPCLVTMTHERLHPGWRPSEIARALDKVYAAPGVPMESRAAFRCAACRTVKPCLVSPYL*
Ga0137375_104103883	3300012360	Vadose Zone Soil	MTYTTEDFVRHSLPRILRSVKYRNTFLCLPCLVTMTRERLHPGWRPSEIARALDKVYAAPGVPMESRAAFRCAACRTVKPCLGSPYL*
Ga0137404_118384371	3300012929	Vadose Zone Soil	EDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRSSEIARALDKVYAAPGVPMESRAAVRCAACRTVKPGLGSPYL*
Ga0137407_105669961	3300012930	Vadose Zone Soil	DFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRHVKPGLGSPYL*
Ga0075354_10030145	3300014308	Natural And Restored Wetlands	FESRAMTYTTEEFVRRSLHRTLRSVKYRNSFLCLPCLVTLTLESLHPGWRPSEITRAVDKIYSAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0075351_10983541	3300014318	Natural And Restored Wetlands	MIAPRTRLPGLPRPCALASPPRRSAYSINGRAFESRAMTYTTEEFVRRSLHRTLRSVKYRNSFLCLPCLVTLTLESLHPGWRPSEITRAVDKIYSAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0180066_10090102	3300014873	Soil	LRRGILAPPRRGGAYSIDGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0180069_11189111	3300014882	Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPAEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0180104_10030374	3300014884	Soil	MTYTTEEFVRHSLHHILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPAVPMESRAAFRCAHCRNVKPCLGSPYL*
Ga0137405_10707293	3300015053	Vadose Zone Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCA
Ga0137418_108770872	3300015241	Vadose Zone Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRHVK
Ga0137403_1000238018	3300015264	Vadose Zone Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRTVKPGLGSPYL*
Ga0184604_100698282	3300018000	Groundwater Sediment	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGIPMESRAAVRCAACRNVKPGLGSPYL
Ga0184608_100992083	3300018028	Groundwater Sediment	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRSSEIARALDKVYAAPGIPMESRAAVRCAACRNVKPGLGSPYL
Ga0184634_100110045	3300018031	Groundwater Sediment	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0184619_100718204	3300018061	Groundwater Sediment	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAFRCAACRNVKPCLGSPYL
Ga0184637_1000319111	3300018063	Groundwater Sediment	MTYTTEEFVRHSLHRILRGVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0184636_10785403	3300018068	Groundwater Sediment	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPAEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0184640_100252634	3300018074	Groundwater Sediment	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0184639_102938341	3300018082	Groundwater Sediment	LRRGILAPPPRGGAYSINGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAMARVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0190265_100101925	3300018422	Soil	MTYTTEAFVRHSLHRILRSVKYRNSFVCLPCLVTMTLESLHRGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0190265_100166864	3300018422	Soil	MTYSTEDFVRHSLPRILHSVKYRNTFVCLSCLVTMTLERLHPGWRPAEIARALDRVYAAPGVPMESRPAFRCAACRTVKPCLGSPYL
Ga0190272_101523894	3300018429	Soil	MSYTTEEFVRRSLPRILRSVKYRNTFVCLPCLVAMTLESLHPGWRSSEITRAMDRVYAAPRVPMESRAAFRCAACRSVKPCLGSPYL
Ga0184648_15142721	3300019249	Groundwater Sediment	ARVSLRRGILASPPRGGAYSINGHAAESRAMTYTTEEFVRHSLHRILRGVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0187894_101321951	3300019360	Microbial Mat On Rocks	IDGHASGSRTMTYTTEEFVRHSLHRTLRSVKYRNSFLCLPCLVTMTLENLHPGWRPSEVSRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0187892_102607732	3300019458	Bio-Ooze	MTYTTEEFVRHSLHRTLRSVKYRNSFLCLPCLVTMTLENLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0137408_12331527	3300019789	Vadose Zone Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRHVKPGLGSPYL
Ga0137408_12622431	3300019789	Vadose Zone Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRAAVRCAACRHVKPG
Ga0193707_10035603	3300019881	Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGAPMESRAAVRCAACRNVKPCLGSPYL
Ga0193713_10143264	3300019882	Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRNVKPCLGSPYL
Ga0193755_10037555	3300020004	Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRNVKPGLGSPYL
Ga0180109_10275321	3300020067	Groundwater Sediment	RAMTYTTEEFVRHSLHHILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPAVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0184649_10614723	3300020068	Groundwater Sediment	VSLRRGILAPPRRGGAYSTNGHAAESRAMTYTTEEFVRHSLHRILRGVKYRNSFLCLPCLVAMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0210403_101159725	3300020580	Soil	MTATTYTTEELVRHSLNRILRGAKYKNRFLCLTCLVAMTLEDLHPGWRKSEIGRALEKVHAAPGIPMESRAAFLCAHCRNVKPCL
Ga0210399_1000857014	3300020581	Soil	MTATTYTTEELVRHSLNRILRGAKYKNRFLCLTCLVAMTLEDLHPGWRKSEIGRALEKVHAAPGIPMESRAAFLCAHCRNVKPCLGSPYL
Ga0210377_100624834	3300021090	Groundwater Sediment	MTYTTEEFVRHSLHRILRGVKYRNSFLCLPCLVAMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0210408_104876621	3300021178	Soil	EELVRHSLNRILRGAKYKNRFLCLTCLVAMTLEDLHPGWRKSEIGRALEKVHAAPGIPMESRAAFLCAHCRNVKPCLGSPYL
Ga0222624_15585782	3300021951	Groundwater Sediment	YVRFPMKWRRAITRFLPPMIVPLARLTVASPSRGGAYSVNGRASPTCAMTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGIPMESRAAVRCAACRNVKPGLGSPYL
Ga0224452_10410731	3300022534	Groundwater Sediment	AVSLRRRRAVAHTPPNGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0222623_101056883	3300022694	Groundwater Sediment	YSTNGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0209640_109333452	3300025324	Soil	MTYTTEEFVRHSLHRILRGVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0207423_10219271	3300025535	Natural And Restored Wetlands	MTYTTEEFVRRSLHRILRGVKYRNSFLCLPCLVTLTRESLHPGWRPSEITRAMDKVYSSPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0207660_102136673	3300025917	Corn Rhizosphere	MTYTTEEFVRHSLRRTLRSVRYRNSFLCLPCLVTMTLGSLHPGWRPSEITRALDRIYAAPGVPMESRPAFRCAHCRSVKPCLGSPYL
Ga0210116_10579142	3300025959	Natural And Restored Wetlands	VDEEEGAMTYTTEEFVRRAIVGILRKDKYRGRFVCLTCLVTMTLESLHPGWRKSEIARAMDKVYAAPGIPMESRASFLCAHCRKTMPCLGAPYL
Ga0208914_10524651	3300026102	Natural And Restored Wetlands	APRTRLPGLPRPCALAPPPRRSAYSINGRAFESRAMTYTTEEFVRRSLHRTLRSVKYRNSFLCLPCLVTLTLESLHPGWRPSEITRAVDKIYSAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0209438_10395756	3300026285	Grasslands Soil	TTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALEKVYAAPGVPMESRAAVRCAACRNVKPCLGSPYL
Ga0257180_10137981	3300026354	Soil	VAHTRPNGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0257166_10146471	3300026358	Soil	RPNGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0257165_10242621	3300026507	Soil	AAQPAPPVYPGAALSLRRRRAVAHTRPNGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0256867_100049076	3300026535	Soil	MTYTTEEFVRHSLHRILRSVKYRNTFLCLPCLVTMTLEGLHPGWRQSEIARAMDKVYAAPGVPMESRSASRCAHCRSVKPCLGSPYL
Ga0256866_11290611	3300027650	Soil	EFVRHSLHRILRSVKYRNTFLCLPCLVTMTLEGLHRGWRQSEIARAMDKVYAAPGVPMESRSASRCAHCRSVKPCLGSPYL
Ga0209283_100045617	3300027875	Vadose Zone Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAVDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0209590_103008001	3300027882	Vadose Zone Soil	MTYTTEDFVRRAILGILCRGNYRGRFVCLTCLVRMTLESLHRGWRKSEITQAMDKVYAAPGIPLESRASFLCAHCRKTMPCLGAA
Ga0209382_101063981	3300027909	Populus Rhizosphere	LHRTLRSVKYRNSFLCLPCLVTMTLENLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0209069_104804602	3300027915	Watersheds	MTYTTGGFVRRALLGILRRKIYRNRFVCLTCLVAMTLESLHPGWRTSEIARALDEVHGAPGMPMESRALFECAHCHKTQPCLGAPVPSL
Ga0209705_102705202	3300027979	Freshwater Sediment	MTYTTEEFVRHSLQRILRSVKYRNTFVCLPCLVAMTLERLHPGWRPSEITRAMERVYAAPGVPMESRVAFRCAACRSVKPCLGSPYL
Ga0209526_104916881	3300028047	Forest Soil	RAMTATTYTTEELVRHSLNRILRGAKYKNRFLCLTCLVAMTLEDLHPGWRKSEIGRALEKVHAAPGIPMESRAAFLCAHCRNVKPCLGSPYL
Ga0307319_102221281	3300028722	Soil	PHDVPLARLTVASPSRGGAYSVNGRASPTCAMTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGIPMESRAAVRCAACRNVKPGLGSPYL
Ga0307504_102013991	3300028792	Soil	SQSCAMTYTTEEFVRHSLQRILRSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARAMERVYAAPGAPMESRAAFRCAACRTVKPCLGSPYL
Ga0307281_100494022	3300028803	Soil	LRRGILASPPRGGAYSINGHAAESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAMDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0247825_114340782	3300028812	Soil	MTYTTEEFVRHSLQRILRGVKYRNRFLCLPCLVTMTLERLHPGWRPTEIARALDRVYAAPGVPIESRAAFRCAACRAVKPCLGSPYL
Ga0307312_103671923	3300028828	Soil	AVAHTPPNGHAAESRAMTYTTEEFVRHSLHRILRGVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0307278_104091142	3300028878	Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRSSEIARALDKVYAAPGVPMESRAAVRCAACRTVKPGLGSPYL
Ga0308309_104663373	3300028906	Soil	MTYTTEEFVRRAVVGILRKDKYRGRVVCLTCLVTMTLESLHSGWRKSEIARAVDKVYAAPGIPMESRASFLCAHCRKTMPCLGAPYL
Ga0299907_103016274	3300030006	Soil	MTYTTEEFVRHSLHRILRSVKYRNTFLCLPCLVTMTLEGLHPGWRQSEIARAMDKVYAAPGVPMESRSASRCAHC
Ga0299907_108007503	3300030006	Soil	AMTYTTEEFVRHSLHRILRSVKYRNTFLCLPCLVTMTLEGLHPGWRQSEIARAMDKVYAAPGVPMESRSASRCAHCRSVKPCLGSPYL
Ga0268386_107816991	3300030619	Soil	QASASRAMTYTTEEFVRHSLHRILHSVKYRNTFLCLPCLVTMTIEGLHPGWRQSEITRAMDKVYAAPGAPMESRSASRCAHCRNVKPCLGSPYL
Ga0308178_10247553	3300030990	Soil	LYVRFPMKWRRAITRFLPPMIVPLARLTVASPSRGGAYSVNGRASPTCTMTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGVPMESRAAVRCAACRNVKPCLGSPYL
(restricted) Ga0255311_10106825	3300031150	Sandy Soil	MTYTTEEFVRHSLQRILRGVKYRNSFVCLPCLVTMTLERLHPGWRPTEIARALDRVYAAPGVPIESRAACRCAACRTVKPCLGSPYL
(restricted) Ga0255310_100126572	3300031197	Sandy Soil	MTYTTEEFVRHSLQRILRSVKYRNTFVCLPCLVAMTLERLHPGWRPSEITRAMERVYAAPGVPMESRVAFRCAACRNVKPCLGSPYL
(restricted) Ga0255334_10071014	3300031237	Sandy Soil	MTYTTEEFVRHSLQRILRGVKYRNSFVCLPCLVTMTLERLHPGWRPTEIARALDRVYAAPGVPIESRAAFRCAACRTVKPCLGSPYL
(restricted) Ga0255334_10077366	3300031237	Sandy Soil	RILRSVKYRNTFVCLPCLVAMTLERLHPGWRPSEITRAMERVYAAPGVPMESRVAFRCAACRNVKPCLGSPYL
Ga0308186_10341172	3300031422	Soil	MTYTTEDFVRHSLPRILHSAKYRNTFLCLPCLVTMTLERLHPGWRPSEIARALDKVYAAPGIPMESRAAVRCA
Ga0307505_105684022	3300031455	Soil	MTYTTEEFVRHSLQRILRSVKYRNTFVCLPCLVAMTLESLHPGWRPAEITRAMDRVYATPGIPMESRAAFRCAACRNVKPCLGSPYL
Ga0307469_101293612	3300031720	Hardwood Forest Soil	MTYTTEEFVRHSLRRILRGVKYRNTFVCLPCLVAMTLESLHPGWRPAEIARAMDRVYATPGVPMESRPAFRCAACRNVKPCLGSPYL
Ga0307468_1007179202	3300031740	Hardwood Forest Soil	MTYTTEEFVRHSLHRILRSVRYRNSFLCLPCLVTMTLESLHAGWRPSEITRALDRIYAAPGVPMESRPAFRCAHCRNVKPCLGSPYL
Ga0307468_1018624512	3300031740	Hardwood Forest Soil	LARPALASPPRGGAYFAEMTYTTEEFVRHSLRRILRGVKYRNTFVCLPCLVAMTLESLHPGWRPAEIARAMDRVYATPGVPMESRPAFRCAACRNVKPCLGSPYL
Ga0307473_110903372	3300031820	Hardwood Forest Soil	TYTTEELVRHSLNRILRGAKYKNRFLCLTCLVAMTLEDLHPGWRKSEIGRALEKVHAAPGIPMESRAAFLCAHCRNVKPCLGSPYL
Ga0214473_112312481	3300031949	Soil	LGGAACPASVSLRRGILASPPRGGAYSANGHASESRAMTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVTMTLESLHPGWRPSEITRALDRIYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL
Ga0334722_108515122	3300033233	Sediment	MTYTTEEFVRHSLPRILRGAKYRNTFLCLPCLVTMTLERLHPGWRPSEITRAMERVYAAPGAPMESRAAFRCAACRTVKPCLGSPYL
Ga0370545_003499_1047_1310	3300034643	Soil	MTYTTEEFVRHSLHRILRSVKYRNSFLCLPCLVAMTLESLHPGWRPSEITRAIDKVYAAPGVPMESRAAFRCAHCRNVKPCLGSPYL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters