Metagenome / Metatranscriptome Family F073798

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073798
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	101 residues
Representative Sequence	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL
Number of Associated Samples	106
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.83 %
% of genes near scaffold ends (potentially truncated)	44.17 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.88% β-sheet: 4.38% Coil/Unstructured: 54.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13460	NAD_binding_10	9.17
PF01969	Ni_insertion	6.67
PF01145	Band_7	4.17
PF04055	Radical_SAM	4.17
PF01370	Epimerase	2.50
PF13624	SurA_N_3	0.83
PF01258	zf-dskA_traR	0.83
PF13394	Fer4_14	0.83
PF12627	PolyA_pol_RNAbd	0.83
PF00857	Isochorismatase	0.83
PF12802	MarR_2	0.83
PF09286	Pro-kuma_activ	0.83
PF12146	Hydrolase_4	0.83
PF06723	MreB_Mbl	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1641	CTP-dependent cyclometallase, nickel-pincer nucleotide (NPN) cofactor biosynthesis	Coenzyme transport and metabolism [H]	6.67
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.83
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.83
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.67 %
Unclassified	root	N/A	8.33 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	34.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.00 %
Unclassified	root	N/A	8.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	34.17 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	15.83 %
Unclassified	root	N/A	8.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	34.17 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	15.83 %
Unclassified	root	N/A	8.33 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	34.17 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	15.83 %
Unclassified	root	N/A	8.33 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	34.17 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	15.83 %
Unclassified	root	N/A	8.33 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	34.17 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	15.83 %
Unclassified	root	N/A	8.33 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10156906	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300002245\|JGIcombinedJ26739_100450408	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300002245\|JGIcombinedJ26739_100990297	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300004092\|Ga0062389_100686826	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300004479\|Ga0062595_101215944	Not Available	670	Open in IMG/M
3300005178\|Ga0066688_10599410	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	708	Open in IMG/M
3300005332\|Ga0066388_105343336	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	651	Open in IMG/M
3300005436\|Ga0070713_101114356	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	763	Open in IMG/M
3300005445\|Ga0070708_100662498	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005467\|Ga0070706_100599673	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300005471\|Ga0070698_101773255	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005529\|Ga0070741_10178131	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300005531\|Ga0070738_10292604	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	686	Open in IMG/M
3300005536\|Ga0070697_100415484	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005537\|Ga0070730_11074789	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005538\|Ga0070731_10103434	All Organisms → cellular organisms → Bacteria → Proteobacteria	1886	Open in IMG/M
3300005541\|Ga0070733_10139384	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300005541\|Ga0070733_11154386	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005542\|Ga0070732_10296942	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005563\|Ga0068855_101154391	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005764\|Ga0066903_100823153	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300006028\|Ga0070717_11767619	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	559	Open in IMG/M
3300006176\|Ga0070765_100804583	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300006176\|Ga0070765_101050140	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300006804\|Ga0079221_10079144	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1558	Open in IMG/M
3300006893\|Ga0073928_10002370	All Organisms → cellular organisms → Bacteria	32601	Open in IMG/M
3300006903\|Ga0075426_10160524	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300007982\|Ga0102924_1007510	All Organisms → cellular organisms → Bacteria	9978	Open in IMG/M
3300009038\|Ga0099829_10993844	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300009093\|Ga0105240_10139037	All Organisms → cellular organisms → Bacteria	2905	Open in IMG/M
3300009093\|Ga0105240_11573939	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	688	Open in IMG/M
3300009143\|Ga0099792_10767119	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	629	Open in IMG/M
3300009523\|Ga0116221_1541890	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010048\|Ga0126373_11115354	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	855	Open in IMG/M
3300010358\|Ga0126370_10656231	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	915	Open in IMG/M
3300010360\|Ga0126372_10594506	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300010361\|Ga0126378_12776824	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	559	Open in IMG/M
3300010373\|Ga0134128_10724048	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1104	Open in IMG/M
3300010379\|Ga0136449_100002320	All Organisms → cellular organisms → Bacteria	57484	Open in IMG/M
3300010396\|Ga0134126_10654498	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1197	Open in IMG/M
3300010396\|Ga0134126_10689099	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1162	Open in IMG/M
3300010396\|Ga0134126_10894371	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	999	Open in IMG/M
3300010401\|Ga0134121_10503186	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1116	Open in IMG/M
3300010880\|Ga0126350_11017025	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1017	Open in IMG/M
3300011269\|Ga0137392_10198186	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300011269\|Ga0137392_10725466	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	822	Open in IMG/M
3300011270\|Ga0137391_10063085	All Organisms → cellular organisms → Bacteria → Proteobacteria	3174	Open in IMG/M
3300011271\|Ga0137393_10109354	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2267	Open in IMG/M
3300012096\|Ga0137389_11376567	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	600	Open in IMG/M
3300012096\|Ga0137389_11667382	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	534	Open in IMG/M
3300012189\|Ga0137388_11495272	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	613	Open in IMG/M
3300012202\|Ga0137363_10234495	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1486	Open in IMG/M
3300012203\|Ga0137399_11182400	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	644	Open in IMG/M
3300012205\|Ga0137362_11283297	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	617	Open in IMG/M
3300012362\|Ga0137361_10586761	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1021	Open in IMG/M
3300012582\|Ga0137358_10729961	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	662	Open in IMG/M
3300012923\|Ga0137359_10755920	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	844	Open in IMG/M
3300012929\|Ga0137404_11169013	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	707	Open in IMG/M
3300012930\|Ga0137407_11310129	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	688	Open in IMG/M
3300012960\|Ga0164301_11308066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300013104\|Ga0157370_10501446	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1115	Open in IMG/M
3300014497\|Ga0182008_10616104	Not Available	611	Open in IMG/M
3300015264\|Ga0137403_10718866	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	858	Open in IMG/M
3300016371\|Ga0182034_10241050	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300016404\|Ga0182037_12038494	Not Available	515	Open in IMG/M
3300017822\|Ga0187802_10198845	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300017823\|Ga0187818_10349811	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	652	Open in IMG/M
3300017942\|Ga0187808_10332564	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	688	Open in IMG/M
3300017943\|Ga0187819_10245278	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1049	Open in IMG/M
3300017943\|Ga0187819_10861026	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	508	Open in IMG/M
3300017955\|Ga0187817_10364654	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	922	Open in IMG/M
3300017955\|Ga0187817_10862117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300017959\|Ga0187779_10230998	Not Available	1166	Open in IMG/M
3300017994\|Ga0187822_10281795	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	581	Open in IMG/M
3300018001\|Ga0187815_10064618	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1539	Open in IMG/M
3300018001\|Ga0187815_10439151	Not Available	557	Open in IMG/M
3300018090\|Ga0187770_11466259	Not Available	555	Open in IMG/M
3300020580\|Ga0210403_10621738	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	871	Open in IMG/M
3300020583\|Ga0210401_10323742	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300021088\|Ga0210404_10865966	Not Available	517	Open in IMG/M
3300021170\|Ga0210400_11611994	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300021171\|Ga0210405_11371464	Not Available	516	Open in IMG/M
3300021406\|Ga0210386_11410816	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	583	Open in IMG/M
3300021560\|Ga0126371_10893646	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1032	Open in IMG/M
3300022557\|Ga0212123_10003425	All Organisms → cellular organisms → Bacteria	33330	Open in IMG/M
3300024227\|Ga0228598_1081117	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	650	Open in IMG/M
3300025928\|Ga0207700_11264377	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	658	Open in IMG/M
3300027603\|Ga0209331_1041716	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1169	Open in IMG/M
3300027645\|Ga0209117_1008804	All Organisms → cellular organisms → Bacteria → Proteobacteria	3438	Open in IMG/M
3300027651\|Ga0209217_1052720	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1223	Open in IMG/M
3300027678\|Ga0209011_1127102	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	728	Open in IMG/M
3300027706\|Ga0209581_1003276	All Organisms → cellular organisms → Bacteria	14131	Open in IMG/M
3300027727\|Ga0209328_10155543	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	695	Open in IMG/M
3300027846\|Ga0209180_10473927	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300027869\|Ga0209579_10526488	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	642	Open in IMG/M
3300027889\|Ga0209380_10440769	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	762	Open in IMG/M
3300027905\|Ga0209415_10286067	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1439	Open in IMG/M
3300027915\|Ga0209069_10780168	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	569	Open in IMG/M
3300028536\|Ga0137415_10976083	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	658	Open in IMG/M
3300028792\|Ga0307504_10243102	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	656	Open in IMG/M
3300028906\|Ga0308309_10537592	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1012	Open in IMG/M
3300028906\|Ga0308309_10824508	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	806	Open in IMG/M
3300031090\|Ga0265760_10141484	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300031670\|Ga0307374_10013625	All Organisms → cellular organisms → Bacteria	11215	Open in IMG/M
3300031708\|Ga0310686_102623585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7066	Open in IMG/M
3300031708\|Ga0310686_111481086	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	518	Open in IMG/M
3300031753\|Ga0307477_10278484	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1157	Open in IMG/M
3300031796\|Ga0318576_10372111	Not Available	675	Open in IMG/M
3300031823\|Ga0307478_10128064	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
3300031945\|Ga0310913_10072219	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300031954\|Ga0306926_10442273	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300031962\|Ga0307479_10082067	All Organisms → cellular organisms → Bacteria → Proteobacteria	3120	Open in IMG/M
3300031962\|Ga0307479_10988643	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	811	Open in IMG/M
3300032180\|Ga0307471_104052592	Not Available	518	Open in IMG/M
3300032205\|Ga0307472_101872413	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	598	Open in IMG/M
3300032770\|Ga0335085_10005028	All Organisms → cellular organisms → Bacteria	21541	Open in IMG/M
3300032783\|Ga0335079_10296583	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300033158\|Ga0335077_10310592	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300033233\|Ga0334722_10504682	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300033480\|Ga0316620_10733960	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	942	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	5.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.83%
Aquatic	Environmental → Aquatic	13.33%
Plants	Host-Associated → Plants	5.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.83%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.50%
Sediment	Environmental → Aquatic → Sediment	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.67%
Loam	Environmental → Terrestrial → Soil → Loam	18.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.50%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Clay	Environmental → Terrestrial → Soil → Clay	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.33%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101569062	3300001593	Forest Soil	VAAPNPQAALSRIRQIRLGIMIFVGLFALWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIVWFLYQAWHVRCPQCGNPFFVNPGLAVGFHLSTQCPYCATRLNDLDEVIR*
JGIcombinedJ26739_1004504081	3300002245	Forest Soil	RTTAVAAPNPQAALSRIRQIRLGIMIFAGLLVLWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIGWFLYQAWHVRCPQCGNPFFVNSGLAVGFHLSTQCPYCATRLNDLDEVIR*
JGIcombinedJ26739_1009902971	3300002245	Forest Soil	VAAPNPQAALSRIRQIRLGIMIFVGLFALWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIVWFLYQAWHVXCPQCGNPFFVNPGLAVGFHLSTQCPYCATRLNDLDEVIR*
Ga0062389_1006868263	3300004092	Bog Forest Soil	MIFAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0062595_1012159442	3300004479	Soil	MAALDPKAPTSTSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRVRCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG*
Ga0066688_105994101	3300005178	Soil	VAKPDAKAAFSRIRQVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIAWLLYQAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELEEPRL*
Ga0066388_1053433361	3300005332	Tropical Forest Soil	IGLMIAAGAFVIWWIVEFVTYAGRTSGFDAFDLLLILIAIAIGVLLYQAWLSRCPQCANRFFINRGLPLGFHFSTQCPFCGARLSDFGERLR*
Ga0070713_1011143562	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRVRCPQCGNPFFTNSSLPAGVHFSTQCPYC
Ga0070708_1006624982	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVVAIGWLLYQAWQARCPHCGNPFFINPSLPSGFHFSTQCPYCGAHLNELEEPPL*
Ga0070706_1005996732	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVVAIGWLLYQAWQARCPHCGNPFFINPSLPSGFHFSTQCPYCGAHLNELDEPSL*
Ga0070698_1017732552	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVVAIGWLLYQAWQARCPHCGNPFFINPSLPSGFHFSTQCPYC
Ga0070741_101781312	3300005529	Surface Soil	VKTVTPRAQSELSRIRQVRVGLTIAAAAFVLWWIIEFATYGGRTSGFDAFDLLLILIAVAIGALLYQAWQARCPQCANRFFVNRGLPLGFHLSTQCPFCGARLSDFEERLR*
Ga0070738_102926042	3300005531	Surface Soil	SRIRQVRVGLTIAAAAFVLWWIIEFATYGGRTSGFDAFDLLLILIAVAIGALLYQAWQARCPQCANRFFVNRGLPLGFHLSTQCPFCGARLSDFEERLR*
Ga0070697_1004154843	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVVAIGWLLYQAWQARCPHCGNPFFINPSLPSGFHFSTQCPYCGAHLNELDEPPL*
Ga0070730_110747892	3300005537	Surface Soil	GRTSGFDAFDFLFVLLIGAAAWLLYQAWQARCPQCGNPFFVNSSLPAWVHFSTQCPYCGADLSDAQAGGG*
Ga0070731_101034344	3300005538	Surface Soil	RLNPMAALDANGPISKSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIAGALGWLLYQAWRARCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG*
Ga0070733_101393842	3300005541	Surface Soil	MAAAGGKSSASRIRQIRLGLAICAGLFALWWIVEFVTYAGRTSGFDAFDFLFVLLIGAAAWLLYQAWQARCPQCGNPFFVNSSLPAWVHFSTQCPYCGADLSDAQAGGG*
Ga0070733_111543861	3300005541	Surface Soil	LFALWWIIEFITYAGRTSGFDAFDFLFLLIAGALGWLLYQAWRARCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG*
Ga0070732_102969422	3300005542	Surface Soil	MISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0068855_1011543913	3300005563	Corn Rhizosphere	PTSTSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRARCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG*
Ga0066903_1008231531	3300005764	Tropical Forest Soil	MTPKVETELSRIRQVRIGLMIAAGAFVIWWIVEFVTYAGRTSGFDAFDLLLILIAIAIGVLLYQAWLSRCPQCANRFFINRGLPLGFHFSTQCPFCGARLSD
Ga0070717_117676191	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PDAKAAFSRIRRLRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELEEPPL*
Ga0070765_1008045832	3300006176	Soil	MVTADARAASSRIRQVRIGLMIATALFVLWWIVEFLTYAGRTSGFDAFDFLFILIGSAIGWLLYQAWQARCPHCGNSFFINPGLPLGFHFSTQCPYCAARSNELD*
Ga0070765_1010501401	3300006176	Soil	MIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVGVIGWFLYQAWRVRCPQCGNPFFVNPGLALGFHFSTQCPYCATRLHDLDEVIR*
Ga0079221_100791442	3300006804	Agricultural Soil	MATADAHAASVKIRRVRIGLIISIGLFALCWIVEFLTYAGRTGVLDAFDLLFVLIAAAIGWLLYQAWRSRCPFCGNPFFVNSGLPLGFHFSTRCPYCSALLNELDEVIR*
Ga0073928_1000237014	3300006893	Iron-Sulfur Acid Spring	MISAGLFAFWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0075426_101605243	3300006903	Populus Rhizosphere	MATADAHAASVKIRRVRIGLIISIGLFALCWIVEFLTYAGRTGALDAFDLLFVLIAAAIGWLLYQAWRSRCPFCGNPFFVNSGLPLGFHFSTRCPYCSALLNELDEVIR*
Ga0102924_10075103	3300007982	Iron-Sulfur Acid Spring	VAKPDAKAAFSRIRRVRIGLMISAGLFAFWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0099829_109938442	3300009038	Vadose Zone Soil	MIFAGLFVLWWIVEFLTYAGRTSRFDAFDLTFVPIVSVIGWFLYQAWHVRCPQCGNPFFINPGLPLGFHFSTQCPYCATRLHDLDEVIR*
Ga0105240_101390372	3300009093	Corn Rhizosphere	VAKPDAKAASSRIRQVRIGLMIAAALFALWWIIEFLTYAGRTSGFDAFDFLFLLIAGAIGWLLYQAWHARCPQCGNPFFINPGLPLGFHFSTQCPYCAASLNDLDEPSG*
Ga0105240_115739392	3300009093	Corn Rhizosphere	LDPKAPTSTSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRVRCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG*
Ga0099792_107671191	3300009143	Vadose Zone Soil	VRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRVRCPQCGNPFFINASLPAGVHFSTQCPYCGAHLSDLDEPGG*
Ga0116221_15418902	3300009523	Peatlands Soil	VAKPDAKAVFSRICQVRIGLMISAGLFTLWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINPGLPSGFH
Ga0126373_111153542	3300010048	Tropical Forest Soil	MMTPKVETELSRIRQVRIGLMIAAGAFVIWWIVEFVTYAGRTSGFDAFDLLLILIAIAIGVLLYQAWLSRCPQCANRFFINRGLPLGFHFSTQCPFCGARLSDFDERLR*
Ga0126370_106562312	3300010358	Tropical Forest Soil	MMTPKVETELSRIRQVRIGLMIAAGAFVIWWIVEFVTYAGRTSGFDAFDLLLILIAIAIGVLLYQAWLSRCPQCANRFFINRGLPLGFHFSTQCPFCGARLSDFGERLR*
Ga0126372_105945061	3300010360	Tropical Forest Soil	KVETELSRIRQVRIGLMIAAGAFVIWWIVEFVTYAGRTSGFDAFDLLLILIAIAIGVLLYQAWLSRCPQCANRFFINRGLPLGFHFSTQCPFCGARLSDFGERLR*
Ga0126378_127768242	3300010361	Tropical Forest Soil	ETELSRIRQVRIGLMIAAGAFVIWWIVEFVTYAGRTSGFDAFDLLLILIAIAIGVLLYQAWLSRCPQCANRFFINRGLPLGFHFSTQCPFCGARLSDFDERLR*
Ga0134128_107240482	3300010373	Terrestrial Soil	VAKPDAKAASSRIRQVRIGLMIAAALFALWWIIEFLTYAGRTSGFDAFDFLFLLIAGAIGWLLYQAWHARCPQCGNPFFINPGLPLGFHFSTQCPYCAASLNDLDEPRG*
Ga0136449_1000023208	3300010379	Peatlands Soil	VAKPDAKAVFSRICQVRIGLMISAGLFTLWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINPGLPSGFHFTTQCPYCGARPSDLDEPQL*
Ga0134126_106544983	3300010396	Terrestrial Soil	VAKPDAKAASSRIRQVRIGLMIAAALFALWWIIEFLTYAGRTSGFDAFDFLFLLIAGAIGWLLYQAWHARCPQCGNPFFINPGLPLGFHFSTQCPYCAASLNDLDEPSGQGW*
Ga0134126_106890991	3300010396	Terrestrial Soil	AARLQLSRIRQVRRGLIICAALLAAWFMIEFVTYAGRTSGFDVFDFLFLLIAIAIGWLLYEGWRAECPGCGSPFFHNSGLPLGFHLSSQCPYCGAHLRDLTEINESDGYRMR*
Ga0134126_108943713	3300010396	Terrestrial Soil	MAALDPKAPTSTSRQIRQVRLGLMICAGLFALWWIVEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRARCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG*
Ga0134121_105031862	3300010401	Terrestrial Soil	MAALDPKAPTSTSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRARCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG*
Ga0126350_110170251	3300010880	Boreal Forest Soil	MIVTALFVLWWIVEFLTYAGRTSGFDAFDFLFILIGGAIGWLLYQAWQARCPHCGNSFFINPGLPLGFHLSTQCPYCAARSNELD*
Ga0137392_101981861	3300011269	Vadose Zone Soil	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQTRCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137392_107254661	3300011269	Vadose Zone Soil	RRARRLKTKAVAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137391_100630853	3300011270	Vadose Zone Soil	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137393_101093542	3300011271	Vadose Zone Soil	MIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVSVIGWFLYQAWHVRCPQCGNPFFINPGLPLGFHFSTQCPYCATRLHDLDEVIR*
Ga0137389_113765671	3300012096	Vadose Zone Soil	VALSRIRQIRVGIMIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVGVIGWFLYQAWNVRCPQCGNPFFINPGLPLGFHFSTQCPYCATRLHDLDEVIR*
Ga0137389_116673821	3300012096	Vadose Zone Soil	GLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137388_114952722	3300012189	Vadose Zone Soil	MIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVSVIGWFLYQAWNVRCPQCGNPFFINPGLPLGFHFSTQCPYCATRLHDLDEVIR*
Ga0137363_102344952	3300012202	Vadose Zone Soil	MGARLARRLKTKAVAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137399_111824002	3300012203	Vadose Zone Soil	AAPNPQAALSRIRQIRLGIMIFVGLFALWWIVEFLTYAGRTRSFDAFDLTFVPIVGVIGWFLYQAWNVRCPQCGNPFFVNSGLALGFHFSTQCPYCATRLHDLDEVIR*
Ga0137362_112832972	3300012205	Vadose Zone Soil	LGGSSAGADATPDAQAHLGARRARRLSTTAVAGPSVQVALSRIRQIRVGIMIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVGVIGWFLYQAWNVRCPQCGNPFFINPGLPLGFHFSTQCPYCATRLHDLDEVIR*
Ga0137361_105867611	3300012362	Vadose Zone Soil	VWWIVEFITYAGRTSGFDAFDFLFLLIVGALAWLLYQAWRVQCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137358_107299612	3300012582	Vadose Zone Soil	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLKYAGRTSGFDAFDFLFVLIVLAIGWLLYQAWQARCAHCGNPFFINPSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137359_107559201	3300012923	Vadose Zone Soil	ATPDAQTHLGARRARRLKTKAVAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL*
Ga0137404_111690132	3300012929	Vadose Zone Soil	ATPDAQAYLGARRARRLRTTAVAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVVAIGWLLYQAWQARCPHCGNPFFINPSLPSGFHFSIQCPYCGAHLNELEEPPL*
Ga0137407_113101292	3300012930	Vadose Zone Soil	FALWWIVEFLTYAGRTSGFDAFDLLFVLIAGGIGWLLYQAWHARCPQCGNPFFINPSLPSGFHFSTQCPYCGASLNDLHEPGG*
Ga0164301_113080661	3300012960	Soil	MAALDAKAPTSKSRQIRQVRLGLMICAGLFAVWWIVEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRARCPQCGNPFFINSSLPAGVHFSTQCPYCGAHLSDLDEP
Ga0157370_105014463	3300013104	Corn Rhizosphere	MAALDPKAPTATSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIAGAIGWLLYQAWHARCPQCGNPFFINPGLPLGFHFSTQCPYCAASLNDLDEPRG*
Ga0182008_106161042	3300014497	Rhizosphere	VTSRAARLQLSRIRQVRRGLIICAALLAAWFMIEFVTYAGRTSGFDVFDFLFLLIAIAIGWLLYEGWRAECPGCGSPFFHNSGLPLGFHLSSQCPYCGAHLRDLTEINESDGYRMR*
Ga0137403_107188662	3300015264	Vadose Zone Soil	VAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVVAIGWLLYQAWQARCPHCGNPFFINPSLPSGFHFSIQCPYCGAHLNELEEPPL*
Ga0182034_102410501	3300016371	Soil	WWIIEFATYAGRTGGFDAFDFLFILLAGAVAWLLYEAWRARCSQCGNLFFVNSSLPAWVNFATQCPYCGANLIDMEDQDI
Ga0182037_120384941	3300016404	Soil	KPDARAAFSRIHRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYQAWLARCPQCGNPFFINRSLPSGFHFSTQCPYCGANLNEIDDPRL
Ga0187802_101988451	3300017822	Freshwater Sediment	MISAGLFALWWIVEFLTYAGRTSGFDAFDFLFLLIAGTTGWLLYQAWQARCPQCGNPFFINPSLPSGFHFSTQCPYCGA
Ga0187818_103498112	3300017823	Freshwater Sediment	MISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPHCGNPFFTNPSLPAGFHFSTRCPYCGAHLNELDEPRL
Ga0187808_103325642	3300017942	Freshwater Sediment	AGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPHCGNPFFTNPSLPAGFHFSTRCPYCGAHLNELDEPRL
Ga0187819_102452782	3300017943	Freshwater Sediment	MISAGLFALWWIIEFLTYAGRTSGFDAFDFLFILIAGAIGWLLYQAWQARCPHCGHPFFTNPGLPLGFHFSTQCPYCGANLNELDEPRL
Ga0187819_108610261	3300017943	Freshwater Sediment	EFLTYAGRTSGFDAFDFLFLLIAGTTGWLLYQAWQARCPQCGNPFFINPSLPSGFHFSTQCPYCGARLNDFDEPRL
Ga0187817_103646542	3300017955	Freshwater Sediment	MISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPHCGNPFFTNPGLPLGFHFSTQCPYCGANLNELDEPRL
Ga0187817_108621172	3300017955	Freshwater Sediment	MISAGLFTLWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINPGLPS
Ga0187779_102309981	3300017959	Tropical Peatland	MAAIGSKTAASRIRQIRLALGICAALFALWWIIEFGTYAGRTSGFDAFDFLFVLLAGAIVWLLYQAWQARCPQCGNPFFVNSSLPSWVHLSNQCPYCGAHLDDIEEHRR
Ga0187822_102817952	3300017994	Freshwater Sediment	AVAKPDAKAVFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFILIAGAIGWLLYQAWQARCPHCGNPFFTNPGLPLGFHFSTQCPYCGANLNELDEPRL
Ga0187815_100646182	3300018001	Freshwater Sediment	MISAGLFALWWIVEFLTYAGRTSGFDAFDFLFLLIAGTTGWLLYQAWQARCPQCGNPFFINPSLPSGFHFSTQCPYCGARLNDFDEPRL
Ga0187815_104391511	3300018001	Freshwater Sediment	VAKPDAKAAFSRIRQVRIGLMISAGLFALWWIIEFLTYAGRTSGFDAFDFLFLLIAGAIGWLLYQAWQARCPHCGNPFFTNPGLPLGFHFSTQCPYCGANLNELDEPRL
Ga0187770_114662591	3300018090	Tropical Peatland	IGRKTAASRIRQIRLALGICAALFALWWIIEFGTYAGRTSGFDAFDFLFVLLAGAIVWLLYQAWQARCPQCGNPFFVNSSLPSWVHLSNQCPYCGAHLDDIEEHRR
Ga0210403_106217382	3300020580	Soil	VAKPDARAASLRIRQVRIGLMISTGLFALWWIVEFFTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELDEPRL
Ga0210401_103237422	3300020583	Soil	VAKPDAKAAFSRIRRIRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYDAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL
Ga0210404_108659661	3300021088	Soil	MIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVGVIGWFLYQAWRVRCPQCGNPFFVNPGLALGFHFSTQCPYCATRLHDLDEVIR
Ga0210400_116119941	3300021170	Soil	MIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVGVIGWFLYQAWRVRCPQCGNPFFVNSGLPLGFHFSTQC
Ga0210405_113714641	3300021171	Soil	LKTKAVAKPDAKAAFSRIRRIRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFLLIVGAIGWLLYEAWQARCPHCGNRFFINPSLPSGFHFSTQCPYCGAHLDELDEPRL
Ga0210386_114108161	3300021406	Soil	AKPDAKAAFSRIRRIRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYDAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL
Ga0126371_108936462	3300021560	Tropical Forest Soil	MTPKVETELSRIRQVRIGLMIAAGAFVIWWIVEFVTYAGRTSGFDAFDLLLILIAIAIGVLLYQAWLSRCPQCANRFFINRGLLLGFHFSTQCPFCGARLSDFGERLR
Ga0212123_1000342513	3300022557	Iron-Sulfur Acid Spring	MISAGLFAFWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDEPRL
Ga0228598_10811172	3300024227	Rhizosphere	MISGGLFALWWIVEFLTYAGRTSAFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAH
Ga0207700_112643772	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAALDPKAPTSTSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQAWRVRCPQCGNPFFTNSSLPAGVHFSTQC
Ga0209331_10417163	3300027603	Forest Soil	LSRIRQIRLGIMIFAGLLVLWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIGWFLYQAWHVRCPQCGNPFFVNSGLAVGFHLSTQCPYCATRLNDLDEVIR
Ga0209117_10088045	3300027645	Forest Soil	VAAPNPQAALSRIRQIRLGIMIFVGLFALWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIVWFLYQAWHVRCPQCGNPFFVNPGLAVGFHLSTQCPYCATRLNDLDEVIR
Ga0209217_10527202	3300027651	Forest Soil	VAAPNPQAALSRIRQIRLGIMIFAGLLVLWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIGWFLYQAWHVRCPQCGNPFFVNSGLAVGFHLSTQCPYCATRLNDLDEVIR
Ga0209011_11271021	3300027678	Forest Soil	MIFVGLFALWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIVWFLYQAWHVRCPQCGNPFFVNPGLAVGFHLSTQCPYCATRLNDLDEVIR
Ga0209581_100327613	3300027706	Surface Soil	VKTVTPRAQSELSRIRQVRVGLTIAAAAFVLWWIIEFATYGGRTSGFDAFDLLLILIAVAIGALLYQAWQARCPQCANRFFVNRGLPLGFHLSTQCPFCGARLSDFEERLR
Ga0209328_101555432	3300027727	Forest Soil	VAAPNPQAALSRIRQIRLGIMIFVGLFALWWIVEFLTYAGRTRSFDAFDLTFVPIIGVIGWFLYQAWHVRCPQCGNPFFVNSGLAVGFHLSTQCPYCATRLNDLDEVIR
Ga0209180_104739272	3300027846	Vadose Zone Soil	MIFAGLFVLWWIVEFLTYAGRTSRFDAFDLTFVPIVSVIGWFLYQAWHVRCPQCGNPFFINPGLPLGFHFSTQCPYCATRLHDLDEVIR
Ga0209579_105264881	3300027869	Surface Soil	RLNPMAALDANGPISKSRQIRQVRLGLMICAGLFALWWIIEFITYAGRTSGFDAFDFLFLLIAGALGWLLYQAWRARCPQCGNPFFTNSSLPAGVHFSTQCPYCGAHLSDLDEPG
Ga0209380_104407692	3300027889	Soil	ARRLKTKAVAKPDAKAAFSRIRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELDEPRL
Ga0209415_102860673	3300027905	Peatlands Soil	MISAGLFTLWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINPGLPSGFHFTTQCPYCGARPSDLDEPQL
Ga0209069_107801682	3300027915	Watersheds	WWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLDELDETRL
Ga0137415_109760832	3300028536	Vadose Zone Soil	MISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYEAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCG
Ga0307504_102431021	3300028792	Soil	VAIPNARATLARIRQVRLGLMISAGLFALWWIIEILTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPHCGNPFFTNPGLPLGFHFSIQCPYCAASLNDLDESR
Ga0308309_105375922	3300028906	Soil	MVTADARAASSRIRQVRIGLMIATALFVLWWIVEFLTYAGRTSGFDAFDFLFILIGSAIGWLLYQAWQARCPHCGNSFFINPGLPLGFHFSTQCPYCAARSNELD
Ga0308309_108245081	3300028906	Soil	MAALDAKAPTSKSRQIRQVRLGLMICAGLFAVWWIVEFITYAGRTSGFDAFDFLFLLIVGALGWLLYQTWRARCPQCGNPFFINSSLPAGVHFSTQCPYCGAHLSDLDEPGG
Ga0265760_101414842	3300031090	Soil	MISAGLFALWWIVEFLTYAGRTSAFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELDEPRL
Ga0307374_1001362510	3300031670	Soil	VATPNARAAFARIRQVRLGLMISTALFALWWIVEFLTYAGRTSGFDAFDFLFVLIVGAIGWLLYQAWQARCPNCGNRFFINPGLPAGFHFSTRCPYCSAHLNDLDEVIR
Ga0310686_1026235853	3300031708	Soil	MISGGLFALWWIVEFLTYAGRTSAFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELDEPRL
Ga0310686_1114810861	3300031708	Soil	ARAASLRIRQVRIGLMISAGLFTLWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINPGLPSGFHFTTQCPYCGARPSDLDEPQL
Ga0307477_102784843	3300031753	Hardwood Forest Soil	VAAPSVQAALSRIRQIRVGIMIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVGVIGWFLYQAWRVRCPQCGNPFFVNPGLALGFHFSTQCPYCATRLHDLDEVIR
Ga0318576_103721112	3300031796	Soil	MAAAGGKSAASRIRQIRLGLAICAGLFALWWIIEFATYAGRTGGFDAFDFLFILLAGAVAWLLYEAWRARCSQCGNLFFVNSSLPAWVNFATQCPYCGANLIDMEDQDI
Ga0307478_101280643	3300031823	Hardwood Forest Soil	MISTGLFALWWIVEFLTYAGRTSAFDAFDFLFVLIAGAIGWLLHQAWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELDEPRL
Ga0310913_100722194	3300031945	Soil	MAAAGGKSAASRIRQIRLGLAICAGLFALWWIIEFATYAGRTGGFDAFDFLFILLAGAVAWLLYEAWRARCSQCGNLFFVNSSLPAWVNFSTQCPYCGANLIDMEDQDI
Ga0306926_104422731	3300031954	Soil	MAAAGGKSAASRIRQIRLGLAICAGLFALWWIIEFATYAGRTGGFDAFDFLFILLAGAVAWLLYEAWRARCSQCGNLFFVNSSLPAWVNFSTQCPYC
Ga0307479_100820672	3300031962	Hardwood Forest Soil	VAAPNLQVALSRIRQIRLGIMIFAGLFVLWWIVEFLTYAGRTSGFDAFDLTFVPIVGVIGWFLYQAWQVRCPQCGNPFFVNSGLPLGFHFSTQCPYCATRLNDLDEMIR
Ga0307479_109886431	3300031962	Hardwood Forest Soil	MISAGLFALWWIVEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQGWQARCPQCGNPFFINRSLPSGFHFSTQCPYCGAHLNELDEPRL
Ga0307471_1040525922	3300032180	Hardwood Forest Soil	EAQAYLGARRARRLRTTAVAKPDAKAAFSRNRRVRIGLMISAGLFALWWIVEFLTYAGRTSGFDDFDFLFVLIVVAIGWLLYQAWQARCPQCGNPFFINSSLPSGFHFSTQCPYCGANLSDLDEPRL
Ga0307472_1018724132	3300032205	Hardwood Forest Soil	VEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWQARCPQCGNPFFINRSLPSGFHFSTQWPYCGAHLNELDEPRL
Ga0335085_1000502822	3300032770	Soil	MAADGGKSAASRIRQVRLGLGICAGLFALWWIVEFATYAGRTGGFDAFDFLFLLLVAAVAWLLYEAWGARCPQCGNPFFVNSSLPAWVNFSTQCPYCGANLSDMEERGG
Ga0335079_102965832	3300032783	Soil	QVRLGLGICAGLFALWWIVEFATYAGRTGGFDAFDFLFLLLVAAVAWLLYEAWGARCPQCGNPFFVNSSLPAWVNFSTQCPYCGANLSDMEERGG
Ga0335077_103105922	3300033158	Soil	EFATYAGRTGGFDAFDFLFLLLVAAVAWLLYEAWGARCPQCGNPFFVNSSLPAWVNFSTQCPYCGANLSDMEERGG
Ga0334722_105046822	3300033233	Sediment	MISAALFALWWIVEFLTYAGRTSGFDAFDFLFVPIAGAIGWLVYQTWHARCPQCGNPFFINRALPLGFHFSTQCPYCAAHLNDLDEVQR
Ga0316620_107339601	3300033480	Soil	MATSDAQAVLSRIRKVRIGLMISAGLFALWWIIEFLTYAGRTSGFDAFDFLFVLIAGAIGWLLYQAWRARCPNCGNPFFINPGLPLGFHFSTQCPYCAASLNDPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073798

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences