Metagenome / Metatranscriptome Family F073797

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F073797
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	59 residues
Representative Sequence	MTPRFKGKPNFDFSLPCPLCGYKIQPNELMRLASHIIQCPKCGGVFDEMSGRKPISTS
Number of Associated Samples	77
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.50 %
% of genes near scaffold ends (potentially truncated)	30.83 %
% of genes from short scaffolds (< 2000 bps)	88.33 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (25.833 % of family members)
Environment Ontology (ENVO)	Unclassified (36.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 13.95% Coil/Unstructured: 86.05%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01068	DNA_ligase_A_M	14.17
PF01828	Peptidase_A4	2.50
PF01872	RibD_C	2.50
PF12704	MacB_PCD	2.50
PF03807	F420_oxidored	2.50
PF00072	Response_reg	1.67
PF09130	DUF1932	1.67
PF04679	DNA_ligase_A_C	1.67
PF13419	HAD_2	0.83
PF01797	Y1_Tnp	0.83
PF00884	Sulfatase	0.83
PF00171	Aldedh	0.83
PF13751	DDE_Tnp_1_6	0.83
PF07676	PD40	0.83
PF07494	Reg_prop	0.83
PF01895	PhoU	0.83
PF09699	Paired_CXXCH_1	0.83
PF07992	Pyr_redox_2	0.83
PF13545	HTH_Crp_2	0.83
PF00571	CBS	0.83
PF09557	DUF2382	0.83
PF00873	ACR_tran	0.83
PF06210	DUF1003	0.83
PF00891	Methyltransf_2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	15.83
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	14.17
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.50
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.50
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	1.67
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.83
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.83
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.83
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.83
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.83
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.50 %
Unclassified	root	N/A	15.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	65.83 %
Unclassified	root	N/A	15.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.67 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	65.00 %
Unclassified	root	N/A	15.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	64.17 %
Unclassified	root	N/A	15.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.00 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	12.50 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.83 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.00 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	12.50 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	8.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.83 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10101586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2062	Open in IMG/M
3300001867\|JGI12627J18819_10483682	Not Available	508	Open in IMG/M
3300002245\|JGIcombinedJ26739_101075534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	691	Open in IMG/M
3300004080\|Ga0062385_10205717	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300004080\|Ga0062385_10809949	Not Available	614	Open in IMG/M
3300004082\|Ga0062384_100380921	Not Available	903	Open in IMG/M
3300004091\|Ga0062387_100441903	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300004091\|Ga0062387_100738141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	726	Open in IMG/M
3300004092\|Ga0062389_100396696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1496	Open in IMG/M
3300004092\|Ga0062389_100737670	Not Available	1161	Open in IMG/M
3300004092\|Ga0062389_101011931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1016	Open in IMG/M
3300004092\|Ga0062389_101725148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	807	Open in IMG/M
3300004635\|Ga0062388_100605450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1005	Open in IMG/M
3300005541\|Ga0070733_10563591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	763	Open in IMG/M
3300005591\|Ga0070761_10085369	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300005591\|Ga0070761_10436064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	803	Open in IMG/M
3300005591\|Ga0070761_10516641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	738	Open in IMG/M
3300005602\|Ga0070762_11154607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	535	Open in IMG/M
3300005712\|Ga0070764_10088845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1636	Open in IMG/M
3300005994\|Ga0066789_10096505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1271	Open in IMG/M
3300006176\|Ga0070765_100809355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	885	Open in IMG/M
3300006176\|Ga0070765_101643357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	604	Open in IMG/M
3300006893\|Ga0073928_10511045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	860	Open in IMG/M
3300009633\|Ga0116129_1184547	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300009697\|Ga0116231_10262304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	963	Open in IMG/M
3300010343\|Ga0074044_10999602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	548	Open in IMG/M
3300010865\|Ga0126346_1207831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	807	Open in IMG/M
3300012930\|Ga0137407_12321735	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300014169\|Ga0181531_10134780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1488	Open in IMG/M
3300014201\|Ga0181537_10482971	Not Available	848	Open in IMG/M
3300014495\|Ga0182015_10018678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5759	Open in IMG/M
3300014495\|Ga0182015_10045700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3238	Open in IMG/M
3300014499\|Ga0182012_10880899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	565	Open in IMG/M
3300014654\|Ga0181525_10538138	Not Available	648	Open in IMG/M
3300020582\|Ga0210395_10314719	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300020582\|Ga0210395_11152961	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300020583\|Ga0210401_11030488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	682	Open in IMG/M
3300021171\|Ga0210405_10897815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	674	Open in IMG/M
3300021181\|Ga0210388_10972600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	729	Open in IMG/M
3300021181\|Ga0210388_11772855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	509	Open in IMG/M
3300021401\|Ga0210393_10814925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	759	Open in IMG/M
3300021401\|Ga0210393_11105727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	640	Open in IMG/M
3300021401\|Ga0210393_11507072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	535	Open in IMG/M
3300021402\|Ga0210385_11085147	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	615	Open in IMG/M
3300021402\|Ga0210385_11260130	Not Available	567	Open in IMG/M
3300021404\|Ga0210389_11168005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	593	Open in IMG/M
3300021405\|Ga0210387_10859443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	800	Open in IMG/M
3300021406\|Ga0210386_11053150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	692	Open in IMG/M
3300021406\|Ga0210386_11257584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	624	Open in IMG/M
3300021406\|Ga0210386_11748488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	513	Open in IMG/M
3300021407\|Ga0210383_10783599	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300021407\|Ga0210383_11039196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	694	Open in IMG/M
3300021420\|Ga0210394_10459685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1120	Open in IMG/M
3300021433\|Ga0210391_10186942	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300021433\|Ga0210391_10646113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	830	Open in IMG/M
3300021474\|Ga0210390_10975928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	693	Open in IMG/M
3300024227\|Ga0228598_1045264	Not Available	870	Open in IMG/M
3300025494\|Ga0207928_1007899	Not Available	2040	Open in IMG/M
3300027058\|Ga0209111_1046210	Not Available	561	Open in IMG/M
3300027609\|Ga0209221_1113633	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300027692\|Ga0209530_1027695	All Organisms → cellular organisms → Bacteria → Acidobacteria	1698	Open in IMG/M
3300027692\|Ga0209530_1134998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	693	Open in IMG/M
3300027817\|Ga0209112_10011227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2503	Open in IMG/M
3300027829\|Ga0209773_10250793	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300027853\|Ga0209274_10298307	Not Available	828	Open in IMG/M
3300027867\|Ga0209167_10381998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	767	Open in IMG/M
3300027884\|Ga0209275_10628421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	617	Open in IMG/M
3300027895\|Ga0209624_10363169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	965	Open in IMG/M
3300027895\|Ga0209624_10922838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	569	Open in IMG/M
3300027908\|Ga0209006_10189696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1790	Open in IMG/M
3300027908\|Ga0209006_10282812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1420	Open in IMG/M
3300027908\|Ga0209006_10902337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	709	Open in IMG/M
3300028746\|Ga0302233_10046949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1780	Open in IMG/M
3300028746\|Ga0302233_10180516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	810	Open in IMG/M
3300028759\|Ga0302224_10431390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	537	Open in IMG/M
3300028798\|Ga0302222_10044852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1799	Open in IMG/M
3300028798\|Ga0302222_10445784	Not Available	507	Open in IMG/M
3300028863\|Ga0302218_10195731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	645	Open in IMG/M
3300028871\|Ga0302230_10401228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	534	Open in IMG/M
3300029882\|Ga0311368_10770817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	658	Open in IMG/M
3300029943\|Ga0311340_10666001	Not Available	898	Open in IMG/M
3300029951\|Ga0311371_10777680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1184	Open in IMG/M
3300029999\|Ga0311339_10427088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1373	Open in IMG/M
3300029999\|Ga0311339_10702756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	989	Open in IMG/M
3300029999\|Ga0311339_10863004	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300029999\|Ga0311339_11009429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300030007\|Ga0311338_10200729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2300	Open in IMG/M
3300030007\|Ga0311338_10491897	Not Available	1289	Open in IMG/M
3300030007\|Ga0311338_11330903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	673	Open in IMG/M
3300030057\|Ga0302176_10416311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	542	Open in IMG/M
3300030058\|Ga0302179_10201849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	878	Open in IMG/M
3300030058\|Ga0302179_10533354	Not Available	515	Open in IMG/M
3300030399\|Ga0311353_10068010	All Organisms → cellular organisms → Bacteria → Acidobacteria	3542	Open in IMG/M
3300030503\|Ga0311370_10495219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1500	Open in IMG/M
3300030503\|Ga0311370_10899222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1003	Open in IMG/M
3300030580\|Ga0311355_10053602	All Organisms → cellular organisms → Bacteria	4724	Open in IMG/M
3300030617\|Ga0311356_10594760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300030617\|Ga0311356_11533263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	602	Open in IMG/M
3300030618\|Ga0311354_11879020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	518	Open in IMG/M
3300030646\|Ga0302316_10125404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1079	Open in IMG/M
3300031231\|Ga0170824_104039077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	550	Open in IMG/M
3300031231\|Ga0170824_116992459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	572	Open in IMG/M
3300031231\|Ga0170824_127323786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	559	Open in IMG/M
3300031234\|Ga0302325_12700308	Not Available	585	Open in IMG/M
3300031234\|Ga0302325_12734152	Not Available	581	Open in IMG/M
3300031236\|Ga0302324_102110752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	702	Open in IMG/M
3300031708\|Ga0310686_105978963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2094	Open in IMG/M
3300031708\|Ga0310686_106378333	All Organisms → cellular organisms → Bacteria → Acidobacteria	1972	Open in IMG/M
3300031708\|Ga0310686_107069336	All Organisms → cellular organisms → Bacteria → Acidobacteria	2814	Open in IMG/M
3300031708\|Ga0310686_107284338	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300031708\|Ga0310686_109215315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	803	Open in IMG/M
3300031708\|Ga0310686_113397238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	905	Open in IMG/M
3300031708\|Ga0310686_114699302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5157	Open in IMG/M
3300031708\|Ga0310686_115711482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4470	Open in IMG/M
3300031708\|Ga0310686_116763859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1190	Open in IMG/M
3300031715\|Ga0307476_10500368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	900	Open in IMG/M
3300031718\|Ga0307474_11453548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540	Open in IMG/M
3300031754\|Ga0307475_11574608	Not Available	503	Open in IMG/M
3300032515\|Ga0348332_14222617	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300032896\|Ga0335075_10170865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.33%
Host-Associated	Host-Associated	1.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.00%
Aquatic	Environmental → Aquatic	13.33%
Plants	Host-Associated → Plants	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.33%
Peat	Environmental → Terrestrial → Peat	25.83%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%
Peat Moss	Host-Associated → Plants → Peat Moss	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	25.83%
Loam	Environmental → Terrestrial → Soil → Loam	18.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.00%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	25.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	25.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101015862	3300001593	Forest Soil	MTPRFKGKPNFDFSLPCPLCGYKIQPSELMRVASHIIQCPKCSGTFDEMAGRRPISTS*
JGI12627J18819_104836822	3300001867	Forest Soil	VTLRFKGKPNFDFSLSCPLCGYKIQPNELMRLGSHIIQCPKCSETFDEMAGRRPISTS*
JGIcombinedJ26739_1010755342	3300002245	Forest Soil	MMAPRFKGKPNFVFSLPCPLCTYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS*
Ga0062385_102057172	3300004080	Bog Forest Soil	MAPRFKGTPNFVFSLPCPLCSYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS*
Ga0062385_108099491	3300004080	Bog Forest Soil	KPNFDLSQPCPMCGYKIQPNELVRLASHVIKCPKCGDAFKEICNRKPLSTS*
Ga0062384_1003809211	3300004082	Bog Forest Soil	DLSQPCPMCGYKIQPNELVRLASHVIKCPKCGDAFKEICNRKPLSTS*
Ga0062387_1004419032	3300004091	Bog Forest Soil	MMTPRFKGKPNFVFSLPCPLCSHQIQPNELIRLASHIIKCPKCGGVFDEMDGRKPISTS*
Ga0062387_1007381412	3300004091	Bog Forest Soil	MTPRFKGKPNFDFSLPCPLCGYKIQPNELMRLASHILKCPKCGGVFDETGGRKPISTS*
Ga0062389_1003966962	3300004092	Bog Forest Soil	MTPRFKGVPRFDLSLPCPVCGYKIQPNELVRLASHIIKCPHCGDVFNELAGKKPLSTS*
Ga0062389_1007376704	3300004092	Bog Forest Soil	MMAPRFKGKPNFVFAVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS*
Ga0062389_1010119311	3300004092	Bog Forest Soil	MAPQFKRKPNFDFSVPCPLCGYKIQPNELMHLASHIVKCPKCGGVFDDKGPSKVIKET*
Ga0062389_1017251482	3300004092	Bog Forest Soil	MMAPRFKGTPRFDFSLPCPACGHKIQPNELVRLASHMIKCPKCGGVFDEMGGRKPLSTS*
Ga0062388_1006054501	3300004635	Bog Forest Soil	MMAPRFKGTPNFVFSLPCPLCSYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS*
Ga0070733_105635912	3300005541	Surface Soil	MTPRFKGKPNFDFSLPCPLCGYKIQPNELMRLASHIIQCPKCGGVFDEMSGRKPISTS*
Ga0070761_100853692	3300005591	Soil	MMAPRFKGKPNFDFSLPCPLCSYKIQPKELMRLASHIVKCPKCGGVFDETGGRKPISTS*
Ga0070761_104360642	3300005591	Soil	LMTPRFKGKPEFDLSLPCPMCGYKIQPNELVRLGSHVIKCPKCGDVFNEMGNRKPLSTS*
Ga0070761_105166412	3300005591	Soil	FKGKPNFDFSVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS*
Ga0070762_111546072	3300005602	Soil	MMTPRFKGKPNFDFSLPCPLCSYKIQPKELMRLASHIVKCPKCGGVFDETGGRKPIS
Ga0070764_100888453	3300005712	Soil	MMAPRFKGKPNFDFSVPCPLCGYKIQPNELMLLESHIIKCPKCGGVFDGRGGRKPISTS*
Ga0066789_100965052	3300005994	Soil	MMAARFKGKPNFDFSLPCPLCGYKIQPNELMRLASHIIQCPKCGGVFDEMGGRKPISTS*
Ga0070765_1008093552	3300006176	Soil	WAATMMAPRFKGKPNFDFSVPCPLCGYKIQPNELMLLESHIIKCPKCGGIFDGMGGRKPISTS*
Ga0070765_1016433572	3300006176	Soil	MMAPRFKGKPNFGFGVPCPLCGYQIEPNELMRLASHVIKCPKCGGAFDEMDGRKPISTS*
Ga0073928_105110452	3300006893	Iron-Sulfur Acid Spring	MTPRFKGKPNFDFSLPCPFCGYKIQPNELMRLASHIIQCPKCGRTFDEMGGRRPVSTS*
Ga0116129_11845471	3300009633	Peatland	MMTPRFKGKPNFDFAVPCPLCDYQIQPKELMRLASHIIKCPKCGGVFDEMDGRKPISTS*
Ga0116231_102623042	3300009697	Host-Associated	MTPRFKGKPHFDFSLLCPHCGYRILPNELLRLASRIIQCPACRVSFDETRGKKPVSTS*
Ga0074044_109996022	3300010343	Bog Forest Soil	MTPRFKGKPNFDFSLPCPLCGYRIQPNELMRLASHIIQCPKCGGVFDEMGGRKPVST
Ga0126346_12078313	3300010865	Boreal Forest Soil	MTPRFKGKPNFDFSLPCPFCGYKIQPNELMRLAAHIIRCPKCGGVFDEVGDRK
Ga0137407_123217351	3300012930	Vadose Zone Soil	FKGKPNFDLSQPCPMCGYKVQPNELVRLASHVIKCPKCGDVFNEMGNRKPLSTS*
Ga0181531_101347802	3300014169	Bog	MTPRFKGVPRFDLSLPCPLCGYKIQPSELVRLAAHLIRCPQCSGIFDQLGKKKPQSTS*
Ga0181537_104829711	3300014201	Bog	MTPRFKGVPRFDLSLPCPLCAYKIQPNELVRLAAHIIRCPQCNGAFDELGKKKPLSTS*
Ga0182015_100186785	3300014495	Palsa	MTPRFKGKPNFDFSLPCPLCGYKIQPKELMRLASHIIQCPECSGVFDETRGRKPISTS*
Ga0182015_100457003	3300014495	Palsa	MMTPRFKGKPNFDFSLPCPMCGYKIQPNELMRLASHIIQCPQCGGSFDELGGRRPVSTS*
Ga0182012_108808992	3300014499	Bog	MTPRFKGKPNFDLSVPCPACGLKIQPNELMRLGSHLIKCPRCAEVFDEMAGRKPLS
Ga0181525_105381381	3300014654	Bog	RRREGQRMTPRFKGVPRFDLSLPCPLCGYKIQPSELVRLAAHLIRCPQCSGIFDQLGKKKPQSTS*
Ga0210395_103147193	3300020582	Soil	MMAPRFKGKPNFVLSVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMNGRKPMSTS
Ga0210395_111529612	3300020582	Soil	EARAPGRWTGGMMAPRFKGKPNFDFSQPCPLCGYKIQPNELMRLASHIIQCPKCSGTFDEMAGRKPISTS
Ga0210401_110304882	3300020583	Soil	MAPRFKGKPNFVFAVPCPLCGYQIQPSELMRLASHIIKCPKCGGVFDEMDGRKPVSTS
Ga0210405_108978151	3300021171	Soil	MMTPRFKGKPNFDFSLPCPLCGFKIQPNELMRLASHIIQCPKCGGVFDEMSGRKPIST
Ga0210388_109726001	3300021181	Soil	GEGMTPRFKGKPNFDLSQLCPLCAYKIQPNELVRLASHLIKCPKCGGSFNEMGNRKPLGT
Ga0210388_117728551	3300021181	Soil	MIAPRFKGKPNFDFSLPCPFCGYKIQPNELMRLASHIIQCPKCGGAFDEMGGRKPVSTS
Ga0210393_108149252	3300021401	Soil	MMAPRFKGKPNFDFSVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0210393_111057272	3300021401	Soil	MMAPRFKGKPNFVFSLPCPLCTYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0210393_115070721	3300021401	Soil	MMAPRFKGKPNFDFSLPCPFCGYKIQPNELMRLASHIIQCPKCGGAFDEMGGRKPVSTS
Ga0210385_110851472	3300021402	Soil	MAPRFKGKPNFDFSVPCPLCGYKIQPNELMLLESHIIKCPKCGGVFDGMGGRKPISTS
Ga0210385_112601301	3300021402	Soil	MTPRFKGKPNFDLSQPCPMCGYKIQPNELVRLGSHVIKCPKCGDSFNEMGNRKPLSTS
Ga0210389_111680052	3300021404	Soil	MMAPRFKGKPNFDFSQPCPLCGYKIQPNELMRLASHIIQCPKCGGVFDEMNGRKPISTS
Ga0210387_108594431	3300021405	Soil	TPRFKGKPNFDLSLPCPLCGHKIQPSELMRLRSHIIQCPKCSGIFDEMAGVKPISTS
Ga0210386_110531502	3300021406	Soil	MMAPRFKGKPNFVLSVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMNGRKPISTS
Ga0210386_112575841	3300021406	Soil	KPNFDFSLPCPLCGYKIQPNELSRPASHIIQCPKCSGTFDEMAGRKPISTS
Ga0210386_117484881	3300021406	Soil	MMTPRFKGKPNFDFSVPCPLCGYKIQPNELMRLASHIIRCPKCSGVFDEMGGGKPI
Ga0210383_107835991	3300021407	Soil	KGVPKFDFSLPCPACEYKIQPKGLLRLASHTVKCPRCGQVFDEMGGAKPLSTS
Ga0210383_110391962	3300021407	Soil	MMAPRFKGKPNFVFAVPCPLCGYQIQPSELMRLASHIIKCPKCGGVFDEMNGRKPISTS
Ga0210394_104596852	3300021420	Soil	MMTPRFKGKPNFDFSLPCPLCGFKIQPNELMRLASHIIQCPKCGGVFDEMSGRKPISTS
Ga0210391_101869422	3300021433	Soil	MAPRFKGKPNFVFSLPCPLCSYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0210391_106461132	3300021433	Soil	MMAPRFKGKPNFVLSVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0210390_109759282	3300021474	Soil	MMAPRFKGKPNFVFAVPCPLCGYQIQPSELMRLASHIIKCPKCGGVFDEMDGRKPIGTS
Ga0228598_10452642	3300024227	Rhizosphere	MTPRFKGKPNFDFSLPCPLCDYKIQPNELMRLASHIIQCPKCSGAFDEMGDRKPPTTS
Ga0207928_10078992	3300025494	Arctic Peat Soil	MMAARFKGKPNFDFSLPCPLCGYKIQPNELMRLASHIIQCPKCGGVFDEMGGRKPISTS
Ga0209111_10462101	3300027058	Forest Soil	VTLRFKGKPNFDFSLSCPLCGYKIQPNELMRLGSHIIQCPKCSETFDEMAGRRPISTS
Ga0209221_11136331	3300027609	Forest Soil	MMAPRFKGKPNFDFSLPCPLCGYKIQPNELTRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0209530_10276953	3300027692	Forest Soil	MMTPRFKGKPNFVFALPCPLCGYQIQPKELMRLASHIIKCPKCGGVFDEMEGRKPISTS
Ga0209530_11349981	3300027692	Forest Soil	MTPRFKGKPNFDFSLPCPLCGYKIQPSELMRVASHIIQCPKCSGTFDEMAGRRPISTS
Ga0209112_100112272	3300027817	Forest Soil	MTPRFKGKPNFDFSLPCPLCGYKIQPNELMRLRSHIIQCPKCNGIFDEMGGRKPLSTS
Ga0209773_102507932	3300027829	Bog Forest Soil	MAPRFKGKPNFDFSLPCPLCGYKIQPNELMRLASHILKCPKCGGVFDETGGRKPISTS
Ga0209274_102983072	3300027853	Soil	MTPRFKGKPEFDLSLPCPMCGYKIQPNELVRLGSHVIKCPKCGDVFNEMGNRKPLSTS
Ga0209167_103819982	3300027867	Surface Soil	MTPRFKGKPNFDFSLPCPLCGYKIQPNELMRLASHIIQCPKCGGVFDEMSGRKPISTS
Ga0209275_106284212	3300027884	Soil	MMTPRFKGKPNFDFSLPCPLCSYKIQPKELMRLASHIVKCPKCGGVFDETGGRKPISTS
Ga0209624_103631692	3300027895	Forest Soil	MAPRFKGKPNFVLSVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0209624_109228382	3300027895	Forest Soil	PEAGAHGRWAGRMMAPRFKGKPNFDFSLPCPLCGYKIQPNELTRLASHIIKCPKCSGVFDEMSGRKPISTS
Ga0209006_101896963	3300027908	Forest Soil	MTPRFKGKPNFDLSLPCPLCGHKIQPRELMRLRSHIIQCPKCSGIFDEMAGVKPISTS
Ga0209006_102828122	3300027908	Forest Soil	MMAPRFKGKPNFDFSVPCPLCGYKIQPNELMLLESHIIKCPKCGGVFDGMGGRKPISTS
Ga0209006_109023372	3300027908	Forest Soil	MTPRFKGKPNFDFSLPCPLCGHQIQPNELMRLGSHIIQCPKCSGTFDEMAGRKSISTS
Ga0302233_100469492	3300028746	Palsa	MTPRFKGKPNFDFSLPCPLCGYKIQPKELMRLASHIIQCPECSGVFDETRGRKPISTS
Ga0302233_101805162	3300028746	Palsa	MTPRFKGKPNFDLSVPCQSCGYKIQPHELVRLASHMVKCPSCGVVFDEMAGKRPLSTS
Ga0302224_104313901	3300028759	Palsa	MTPRFKGKPNFDLSLPCPLCSYKIQPNELRRLTSHIIQCPKCSGTFDEMAGQKPISTS
Ga0302222_100448523	3300028798	Palsa	MTPRFKGKPNFDFSLPCPLCGYKIQPKELMRLASHIVQCPECSGVFDETRGRKPISTS
Ga0302222_104457842	3300028798	Palsa	GGVPRPALAPNNPEAGPDGGWAGWMMAPRFKGKPNFVFYLPCPLCTYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0302218_101957312	3300028863	Palsa	MTPRFKGKPNFDFAVPCPLCDYQIQPKELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0302230_104012281	3300028871	Palsa	REHGRRAGSTMTPRFKGKPNFDFSLPCPLCGYKIQPKELMRLASHIIQCPECSGVFDETRGRKPISTS
Ga0311368_107708172	3300029882	Palsa	MTPRFKGKPNFDLSVPCQSCGYKIQPHELVRLASHMVKCPSCGAVFDEMAGKKPLSTS
Ga0311340_106660012	3300029943	Palsa	MTPRFKGKPNFDLSMPCPSCDYKIQPHELMRLASHMVKCPSCGAVFDEMAGKKPLSTS
Ga0311371_107776802	3300029951	Palsa	MMAPRFKGRPNFVFSLPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0311339_104270882	3300029999	Palsa	MMTPRFKGKPNFDFAVPCPLCDYQIQPKELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0311339_107027561	3300029999	Palsa	MAPRFKGVPNFDFSLPCPWCGYKIQPNELVRLASHIIKCPGCGGVFNELGGKKPLSTS
Ga0311339_108630042	3300029999	Palsa	MMAPRFKGKPNFVFYLPCPLCTYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0311339_110094291	3300029999	Palsa	PKAREHGRWAGGTMTPRFKGKPNFDFSLPCPLCGYKIQPRELMRLASHIIQCPKCSGVFDETRGRKPISTS
Ga0311338_102007295	3300030007	Palsa	WEDHMTPRFKGKPNFDLSVPCQSCGYKIQPHELVRLASHMVKCPSCGVVFDEMAGKRPLSTS
Ga0311338_104918972	3300030007	Palsa	MTPRFKGKPNFDLSVPCQSCGYKIQPHELVRLASHMVRCPSCGVVFDEMA
Ga0311338_113309031	3300030007	Palsa	MTPRFKGKPNFDLSQPCPLCAYKIQANELVRLASHLIKCPKCGGAFNEMGNRKPLSTS
Ga0302176_104163111	3300030057	Palsa	APRFKGKPNFVFYLPCPLCTYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0302179_102018492	3300030058	Palsa	MMAPRFKGKPNFVLSLPCPLCGYQIQPNELVRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0302179_105333541	3300030058	Palsa	GVSRPALAPDDPQTCAYGRWAVGMMTPRFKGKPNFDFAVPCPLCDYQIQPKELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0311353_100680103	3300030399	Palsa	MAPRFKGVPKFDFSLPCPACGYKIQPNELLRLASHTVKCPRCGQVFDELGGAKPLSTS
Ga0311370_104952192	3300030503	Palsa	MTPRFKGKPNFDFSLPCPLCGYKIQPSELMRVASHIIHCPKCSGTFDEMAGRRPISTS
Ga0311370_108992222	3300030503	Palsa	MAPRFKGKPNFDFSLPCPLCGYKIQPSELMRLAARITQCPKCGGKFDEMGGRESISAS
Ga0311355_100536025	3300030580	Palsa	MTPRFRGVPTFDFSLSCPACGYKIQPNELLRLASHTVKCPRCGQVFDDAVT
Ga0311356_105947602	3300030617	Palsa	MTPRFKGKPNFDFTLPCPLCGYKIQPSELMRVASHIIHCPKCSGTFDEMAGRRPISTS
Ga0311356_115332631	3300030617	Palsa	MMAPRFKGKPNFVFAVPCPLCGYQIQPNALMRLASHIIKCPKCGGVFDEM
Ga0311354_118790201	3300030618	Palsa	MAPRFKGKPNFVLSLPCPLCGYQIQPNELVRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0302316_101254042	3300030646	Palsa	PDDPETREHGRRAGSTMTPRFKGKPNFDFSLPCPLCGYKIQPKELMRLASHIIQCPECSGVFDETRGRKPISTS
Ga0170824_1040390772	3300031231	Forest Soil	MMTPRFKGKPNFDFSQPCPLCGYKIQPNELMRLAAHIIRCPKCGGVFDEMGGRKPISTS
Ga0170824_1169924592	3300031231	Forest Soil	MAPRFKGKPNFDFSQPCPLCGYKIHPNELMRLAAHIIQCPKCGGVFDEMGGRKPISTS
Ga0170824_1273237861	3300031231	Forest Soil	MTPRFKGKPNFDFSLPCPHCGYKIQPNELMRLASHIIQCPKCGGAFDEMAGRIPVTTS
Ga0302325_127003081	3300031234	Palsa	FDLSLLCPVCEYKIQPNELLRVASHMIKCPTCGGIFDEMGGKKPLSTS
Ga0302325_127341521	3300031234	Palsa	MTPRFKGKPNFDLSQPCPMCGYKIQPNELVRLASHVIKCPKYGDAFNEMGN
Ga0302324_1021107521	3300031236	Palsa	MMAPRFKGKPNFVLSLPCPLCGYQIQPNELVRLASHIIKCPKCGGVFDEMDGRKPIST
Ga0310686_1059789632	3300031708	Soil	MTPRFKGKPNFDFSLPCPLCGYKIQPNELRRLASHIIQCPKCSGTFDEMAGQRPISTS
Ga0310686_1063783332	3300031708	Soil	MMARFKGKPNFVFAVPCPLCGYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0310686_1070693363	3300031708	Soil	MMTPRFKGKPNFDFSLPCPHCGYKIQPNELMRLASHIIQCPKCGGVFDETGGRKTISTS
Ga0310686_1072843382	3300031708	Soil	MAPRFKGKPNFVFYLPCPLCTYQIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0310686_1092153152	3300031708	Soil	DGGWAGWMMAPRFKGKPNFVFSLPCPLCSYEIQPNELMRLASHIIKCPKCGGVFDEMDGRKPISTS
Ga0310686_1133972382	3300031708	Soil	MMTPRFKGKPNFVFALPCPHCGYQIQPNELMRLASHIIKCPKCGGVFDEMNGRKPISTS
Ga0310686_1146993026	3300031708	Soil	MTPRFKGKPNFDFSLRCPLCGYKIQPNELKRLASHILKCPKCGGVFDETGGRKPISTS
Ga0310686_1157114824	3300031708	Soil	MTLRFKGKPNFDFSLPCPLCGYKIQPSELMRVASHIIQCPKCSGTFDEMAGRRPISTS
Ga0310686_1167638591	3300031708	Soil	KPNFDFSQPCPLCGYKIQPNELMRLASHIIQCPKCGGVFDEMGRRKPISTS
Ga0307476_105003682	3300031715	Hardwood Forest Soil	MAPRFKGVPNFDFSLPCPACGYKIQPNELLRLASHTVKCPRCGQVFDEMGGAKPLSTS
Ga0307474_114535482	3300031718	Hardwood Forest Soil	MMTPRFKGKPNFDFSQPCPFCGYKIQPNELMRLASHIIQCPKCGGVFDEMGGRKPISTS
Ga0307475_115746081	3300031754	Hardwood Forest Soil	MMTPRFKGKPNFDLSQPCPLCGYKIQPNERMPLASHIIQCPKCGGVFDEMGGRKPITLG
Ga0348332_142226172	3300032515	Plant Litter	APDDPEAGAYGRWAGRMMTPRFKGKPNFDFSVPCPLCGYKIQPNELMRLASHIIRCPKCSGVFDEMSGRKPISTS
Ga0335075_101708652	3300032896	Soil	MRPRFKGKPNFDLSQPCPMCGYKIQPNELARLASHVIKCPKCGDAFDEMGNRKPQSTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073797

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences