Metagenome / Metatranscriptome Family F073796

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073796
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	123 residues
Representative Sequence	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Number of Associated Samples	100
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.08 %
% of genes near scaffold ends (potentially truncated)	45.83 %
% of genes from short scaffolds (< 2000 bps)	85.83 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.667 % of family members)
Environment Ontology (ENVO)	Unclassified (44.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.75% β-sheet: 18.03% Coil/Unstructured: 67.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02567	PhzC-PhzF	51.67
PF08543	Phos_pyr_kin	13.33
PF12172	DUF35_N	0.83
PF10431	ClpB_D2-small	0.83
PF00293	NUDIX	0.83
PF01979	Amidohydro_1	0.83
PF00083	Sugar_tr	0.83
PF00583	Acetyltransf_1	0.83
PF13365	Trypsin_2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	51.67
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	13.33
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	13.33
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	13.33
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	13.33

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.00 %
Unclassified	root	N/A	30.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.00 %
Unclassified	root	N/A	30.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.00 %
Unclassified	root	N/A	30.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.00 %
Unclassified	root	N/A	30.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	63.33 %
Unclassified	root	N/A	30.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.67 %
Unclassified	root	N/A	30.00 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	4.17 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.00 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	20.00 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4.17 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.50 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.83 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.00 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	20.00 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4.17 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	0.83 %
Hydrocarboniphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga	0.83 %
Rubritepida	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.00 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	20.00 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4.17 %
unclassified Rubritepida	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → unclassified Rubritepida	0.83 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.83 %
Hydrocarboniphaga daqingensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga daqingensis	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.00 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	20.00 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4.17 %
Rubritepida sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → unclassified Rubritepida → Rubritepida sp.	0.83 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.83 %
Hydrocarboniphaga daqingensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga daqingensis	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10151104	Not Available	600	Open in IMG/M
3300002245\|JGIcombinedJ26739_100013878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	6703	Open in IMG/M
3300002245\|JGIcombinedJ26739_100035592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4447	Open in IMG/M
3300002245\|JGIcombinedJ26739_100038472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4291	Open in IMG/M
3300002245\|JGIcombinedJ26739_100289565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1522	Open in IMG/M
3300002245\|JGIcombinedJ26739_100513271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1076	Open in IMG/M
3300002245\|JGIcombinedJ26739_101238936	Not Available	636	Open in IMG/M
3300003505\|JGIcombinedJ51221_10013281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2744	Open in IMG/M
3300003505\|JGIcombinedJ51221_10193169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300004121\|Ga0058882_1789142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga daqingensis	769	Open in IMG/M
3300005712\|Ga0070764_10945022	Not Available	542	Open in IMG/M
3300005921\|Ga0070766_10580106	Not Available	751	Open in IMG/M
3300006176\|Ga0070765_100992605	Not Available	794	Open in IMG/M
3300009826\|Ga0123355_10300849	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300010154\|Ga0127503_10143027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300010864\|Ga0126357_1009301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300010864\|Ga0126357_1283061	Not Available	517	Open in IMG/M
3300010865\|Ga0126346_1411027	Not Available	568	Open in IMG/M
3300010869\|Ga0126359_1346548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	919	Open in IMG/M
3300010880\|Ga0126350_10938356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300010880\|Ga0126350_11328625	Not Available	505	Open in IMG/M
3300011120\|Ga0150983_14618657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300011120\|Ga0150983_15519407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	750	Open in IMG/M
3300012176\|Ga0153952_1039641	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300012924\|Ga0137413_10991136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300014501\|Ga0182024_10967003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300015206\|Ga0167644_1161894	Not Available	537	Open in IMG/M
3300015242\|Ga0137412_10234340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1457	Open in IMG/M
3300019176\|Ga0184596_128641	Not Available	527	Open in IMG/M
3300020579\|Ga0210407_10021176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4828	Open in IMG/M
3300020580\|Ga0210403_10009548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7942	Open in IMG/M
3300020581\|Ga0210399_10111509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2243	Open in IMG/M
3300020582\|Ga0210395_10025677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4327	Open in IMG/M
3300021168\|Ga0210406_10002337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21843	Open in IMG/M
3300021170\|Ga0210400_10147728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1893	Open in IMG/M
3300021171\|Ga0210405_10164241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1759	Open in IMG/M
3300021178\|Ga0210408_10027050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4547	Open in IMG/M
3300021180\|Ga0210396_11171201	Not Available	644	Open in IMG/M
3300021181\|Ga0210388_10423689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → unclassified Rubritepida → Rubritepida sp.	1170	Open in IMG/M
3300021405\|Ga0210387_10297855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1418	Open in IMG/M
3300021406\|Ga0210386_10642791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300021407\|Ga0210383_10192219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1744	Open in IMG/M
3300021433\|Ga0210391_10189807	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300021474\|Ga0210390_10426283	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300021475\|Ga0210392_10453745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	940	Open in IMG/M
3300021559\|Ga0210409_11122631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	661	Open in IMG/M
3300022498\|Ga0242644_1024983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300022499\|Ga0242641_1037960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	551	Open in IMG/M
3300022507\|Ga0222729_1054152	Not Available	562	Open in IMG/M
3300022509\|Ga0242649_1018182	Not Available	817	Open in IMG/M
3300022511\|Ga0242651_1052309	Not Available	508	Open in IMG/M
3300022523\|Ga0242663_1020959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	983	Open in IMG/M
3300022527\|Ga0242664_1063137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300022527\|Ga0242664_1109835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300022529\|Ga0242668_1086943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	616	Open in IMG/M
3300022530\|Ga0242658_1177337	Not Available	566	Open in IMG/M
3300022531\|Ga0242660_1089977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736	Open in IMG/M
3300022709\|Ga0222756_1047346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300022709\|Ga0222756_1067101	Not Available	566	Open in IMG/M
3300022715\|Ga0242678_1081728	Not Available	515	Open in IMG/M
3300022718\|Ga0242675_1111054	Not Available	538	Open in IMG/M
3300022720\|Ga0242672_1070088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300022722\|Ga0242657_1218055	Not Available	534	Open in IMG/M
3300022724\|Ga0242665_10114403	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300025909\|Ga0207705_11551243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300027109\|Ga0208603_1044345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	682	Open in IMG/M
3300027117\|Ga0209732_1011446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1486	Open in IMG/M
3300027117\|Ga0209732_1093075	Not Available	524	Open in IMG/M
3300027164\|Ga0208994_1063092	Not Available	556	Open in IMG/M
3300027505\|Ga0209218_1043693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	895	Open in IMG/M
3300027567\|Ga0209115_1154231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	513	Open in IMG/M
3300027619\|Ga0209330_1035941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1128	Open in IMG/M
3300027648\|Ga0209420_1015243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2589	Open in IMG/M
3300027855\|Ga0209693_10062970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1826	Open in IMG/M
3300027889\|Ga0209380_10018753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3918	Open in IMG/M
3300027895\|Ga0209624_10449906	Not Available	858	Open in IMG/M
3300027908\|Ga0209006_10046105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3923	Open in IMG/M
3300027908\|Ga0209006_10424138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1117	Open in IMG/M
3300028906\|Ga0308309_11746698	Not Available	527	Open in IMG/M
3300029636\|Ga0222749_10119031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1259	Open in IMG/M
3300029701\|Ga0222748_1090451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	583	Open in IMG/M
3300029943\|Ga0311340_11324252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	573	Open in IMG/M
3300030586\|Ga0265393_1230601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	502	Open in IMG/M
3300030597\|Ga0210286_1295671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	528	Open in IMG/M
3300030623\|Ga0265392_1119208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	639	Open in IMG/M
3300030632\|Ga0210250_10008203	Not Available	504	Open in IMG/M
3300030730\|Ga0307482_1155662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	669	Open in IMG/M
3300030730\|Ga0307482_1200971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300030730\|Ga0307482_1203298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	603	Open in IMG/M
3300030743\|Ga0265461_12805181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	582	Open in IMG/M
3300030743\|Ga0265461_13294174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	545	Open in IMG/M
3300030805\|Ga0265756_110814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300030815\|Ga0265746_1034017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300030862\|Ga0265753_1108181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	570	Open in IMG/M
3300030886\|Ga0265772_107883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	506	Open in IMG/M
3300030937\|Ga0138302_1396047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	668	Open in IMG/M
3300031057\|Ga0170834_107381933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	501	Open in IMG/M
3300031057\|Ga0170834_110782986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1062	Open in IMG/M
3300031122\|Ga0170822_13324856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	585	Open in IMG/M
3300031231\|Ga0170824_113628846	Not Available	565	Open in IMG/M
3300031469\|Ga0170819_15602334	Not Available	534	Open in IMG/M
3300031561\|Ga0318528_10259194	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300031708\|Ga0310686_100874161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7443	Open in IMG/M
3300031715\|Ga0307476_10777007	Not Available	709	Open in IMG/M
3300031715\|Ga0307476_10947798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300031718\|Ga0307474_10637352	Not Available	841	Open in IMG/M
3300031719\|Ga0306917_10965940	Not Available	666	Open in IMG/M
3300031753\|Ga0307477_10703688	Not Available	676	Open in IMG/M
3300031779\|Ga0318566_10668684	Not Available	504	Open in IMG/M
3300031795\|Ga0318557_10567741	Not Available	521	Open in IMG/M
3300031823\|Ga0307478_10730570	Not Available	829	Open in IMG/M
3300031954\|Ga0306926_12440660	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300032059\|Ga0318533_10574392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	827	Open in IMG/M
3300032121\|Ga0316040_121484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300032515\|Ga0348332_11465831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	747	Open in IMG/M
3300032515\|Ga0348332_13311171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	582	Open in IMG/M
3300032515\|Ga0348332_13866483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	508	Open in IMG/M
3300032739\|Ga0315741_11632446	Not Available	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.50%
Host-Associated	Host-Associated	2.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.67%
Aquatic	Environmental → Aquatic	0.83%
Arthropoda	Host-Associated → Arthropoda	0.83%
Plants	Host-Associated → Plants	0.83%
Fungi	Host-Associated → Fungi	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.33%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.50%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Peat	Environmental → Terrestrial → Peat	0.83%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%
Mycelium	Host-Associated → Fungi → Mycelium	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.33%
Loam	Environmental → Terrestrial → Soil → Loam	24.17%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	24.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.33%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	19.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.00%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	5.00%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019176	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030586	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030597	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030623	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030632	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR004SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030805	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030886	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032121	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101511042	3300001471	Forest Soil	MAHPVSLVGAATLGILLATSCAEAQTVHHRTHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGLDRLPNDVSLPEANRPLITVSAPGLSGP
JGIcombinedJ26739_1000138782	3300002245	Forest Soil	MTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFSGPLFDWY*
JGIcombinedJ26739_1000355925	3300002245	Forest Soil	MAHPVSLVGAATLGILLATSCAEAQTVHHRTHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGLDRLPNDVSLPEANRPLITVSAPGLSGPWLQMY*
JGIcombinedJ26739_1000384722	3300002245	Forest Soil	MAHPVSLVGAAALGILLATSCADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLNQPQAWRTANQETIQGVRGLDRLPNDVSLPEANRPLITVSAPGLSGPWLQMY*
JGIcombinedJ26739_1002895651	3300002245	Forest Soil	CADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETFQGVRGIDRLPNDISLPEANRPLIIVSSPGLSGPWLQLY*
JGIcombinedJ26739_1005132712	3300002245	Forest Soil	MTHPVSLLGAAALGIIFATSYADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
JGIcombinedJ26739_1012389362	3300002245	Forest Soil	MTHPISLLGAAALGIVLASSCAQAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEAN
JGIcombinedJ51221_100132814	3300003505	Forest Soil	MTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY*
JGIcombinedJ51221_101931692	3300003505	Forest Soil	MTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY*
Ga0058882_17891422	3300004121	Forest Soil	MTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY*
Ga0070764_109450221	3300005712	Soil	AHRRMSEQRLVYNRAGERGALMIHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0070766_105801062	3300005921	Soil	MNLLTRRNFSSRKPFDQLNRTFTFFAHRRMSEQRSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0070765_1009926051	3300006176	Soil	MTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLI
Ga0123355_103008493	3300009826	Termite Gut	MMRQFGLLGAAALGIVLASSSADAQTVHHRTKHPAPAGRQIIVREAVEPWLTLGTWAPVGSRQAYAIDTLRPPLQRNSVQGTFVGMRGNDRLPNEIRLPEANRPLITVSSPGLSGPLFDWY*
Ga0127503_101430272	3300010154	Soil	MTHPVSLLGAAALGIIFATSCAGAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNEVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0126357_10093011	3300010864	Boreal Forest Soil	MTHPVSLLGAAALGIIFATSCADAQTVHHRAHHPAATGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNEVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0126357_12830611	3300010864	Boreal Forest Soil	FTFFAHRRMNEPYSAYDRAGQRGAFMTHPVSLLGAAALGIILATSCAAAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0126346_14110271	3300010865	Boreal Forest Soil	MTRPISLLGAAALGIVLASSCAQAQTVHHRTHHSAAAAGRQIIVREGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGIDRLPNEVSLPEANRPLLTVSAPGLSGPWLDLY*
Ga0126359_13465481	3300010869	Boreal Forest Soil	MTHPVSLLGAAALGIIFATSCADAQTVHHRAHHPAATGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0126350_109383562	3300010880	Boreal Forest Soil	MTHPISLLGAAALGIVFASSCAQAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0126350_113286252	3300010880	Boreal Forest Soil	MSEQRSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDIS
Ga0150983_146186572	3300011120	Forest Soil	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY*
Ga0150983_155194072	3300011120	Forest Soil	GEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY*
Ga0153952_10396411	3300012176	Attine Ant Fungus Gardens	LGAVALGIVLASTCADAAQTVHHRAKHPAPAGRQIIVRHGVEPWLTLGTWAPVGSRNGYVLDTLRPPQAQRTANQETIQGVRGIDRLPNDIHLPEANRPLITVA
Ga0137413_109911361	3300012924	Vadose Zone Soil	SLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0182024_109670032	3300014501	Permafrost	MSSADAQTVHHWAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDASLPEANRPLLIVSSPGLSGPWLQLY*
Ga0167644_11618942	3300015206	Glacier Forefield Soil	MSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY*
Ga0137412_102343402	3300015242	Vadose Zone Soil	MTHPVSLLGAAALGIVLASSCAQAQAVHHRAHHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY*
Ga0184596_1286412	3300019176	Soil	MTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNEVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210407_100211761	3300020579	Soil	MTHPVSLLGAATLGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0210403_1000954810	3300020580	Soil	MTHPVSLLGAATLGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210399_101115092	3300020581	Soil	MNLLTRRNFSSRKPFDPLNRTFTFFAHRRMSEQRSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210395_100256772	3300020582	Soil	MTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDW
Ga0210406_100023372	3300021168	Soil	MTEQRSVYTGAGERGAFMTHPVSLLGAATLGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0210400_101477283	3300021170	Soil	SSRKPFDPLNRTFTFFAHRRMSEQRSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210405_101642411	3300021171	Soil	MTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPG
Ga0210408_100270503	3300021178	Soil	MTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210396_111712012	3300021180	Soil	MIHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210388_104236891	3300021181	Soil	MTHPVSLLGAAALGIIFATSYADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPG
Ga0210387_102978552	3300021405	Soil	AFMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0210386_106427911	3300021406	Soil	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210383_101922193	3300021407	Soil	MTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFSGPLLDW
Ga0210391_101898073	3300021433	Soil	MTHPVSLFGTVALGIVLASSCAEAQTVHHPTHHRAAVGRQITVRKGVEPWLTLGTWAPVGSRQAYVLDTFRPAQRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0210390_104262832	3300021474	Soil	MAHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0210392_104537451	3300021475	Soil	LGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0210409_111226311	3300021559	Soil	TFTFFAHRRMSEQRSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0242644_10249831	3300022498	Soil	AGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0242641_10379602	3300022499	Soil	MTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0222729_10541522	3300022507	Soil	MTHPVSLVGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0242649_10181821	3300022509	Soil	MTHPVSLVGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0242651_10523091	3300022511	Soil	TGAGERGAFMTHPVSLLGAATLGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0242663_10209592	3300022523	Soil	VAFRVQKAGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0242664_10631371	3300022527	Soil	AFRVQKAGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0242664_11098351	3300022527	Soil	DAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0242668_10869432	3300022529	Soil	SCTKGWGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0242658_11773371	3300022530	Soil	LNQRFIYFCCTPAQWLVAFRVQKAGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0242660_10899771	3300022531	Soil	THPVSLLGAATLGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQM
Ga0222756_10473462	3300022709	Soil	LVAFRVQKAGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0222756_10671012	3300022709	Soil	MIHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVAPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETFQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY
Ga0242678_10817281	3300022715	Soil	AGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0242675_11110541	3300022718	Soil	AQWLVAFRVQKAGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0242672_10700882	3300022720	Soil	MTHPVSLLGAATLGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNEVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0242657_12180551	3300022722	Soil	TPAQWLVAFRVQKAGEREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0242665_101144032	3300022724	Soil	FFAHRRMSEQGSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0207705_115512431	3300025909	Corn Rhizosphere	FASTCADAQPVHHRAKHPAPAGRQIIVRQGVEPWLTLGTWAPVGSRQAYALDTLNPPQRTASEGTFVGMRGADRLPNDVSLPEAKRPLITVSSPGLSGPWFEWY
Ga0208603_10443452	3300027109	Forest Soil	MIHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDISLPEANRPLIIVSSPGLSGPWLQLY
Ga0209732_10114462	3300027117	Forest Soil	MTHPVSLLGAAALGIVLAASWADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETFQGVRGIDRLPNDISLPEANRPLIIVSSPGLSGPWLQLY
Ga0209732_10930752	3300027117	Forest Soil	MAHPVSLVGAATLGILLATSCAEAQTVHHRTHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGLDRLPNDVSLPEA
Ga0208994_10630922	3300027164	Forest Soil	MTHPVSLLGAAALGIIFATSCADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVS
Ga0209218_10436932	3300027505	Forest Soil	MTHPVSLLGAAALGIVLAASWADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0209115_11542311	3300027567	Forest Soil	MAHPVSLVGAATLGILLATSCAEAQTVHHRTHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGIDRLPNDISLPEANRPLLIVSSPGLSGP
Ga0209330_10359412	3300027619	Forest Soil	MTHPVSLVGAAALGIVLATWCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLITVSAPGLSGPWLQMY
Ga0209420_10152432	3300027648	Forest Soil	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY
Ga0209693_100629701	3300027855	Soil	MTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPE
Ga0209380_100187533	3300027889	Soil	MSEQRSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDISLPEANRPLIIVSSPGLSGPWLQLY
Ga0209624_104499062	3300027895	Forest Soil	MNLPARRNFLPQKPFDYTKGSFTFFAHRRMSEPCSVYSGTGEGGALMAHPVSLVGAAALGILLATSCADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLNQPQAWRTANQETIQGVRGLDRLPNDVSLPEANRPLITVSAPGLSGPWLQMY
Ga0209006_100461053	3300027908	Forest Soil	MAHPVSLVGAATLGILLATSCAEAQTVHHRTHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGLDRLPNDVSLPEANRPLITVSAPGLSGPWLQMY
Ga0209006_104241382	3300027908	Forest Soil	MAHPVSLVGAAALGILLATSCADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLNQPQAWRTANQETIQGVRGLDRLPNDVSLPEANRPLITVSAPGLSGPWLQMY
Ga0308309_117466982	3300028906	Soil	MAHPVSFVGAATLGILLATSCAEAQTVHHRTHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGLDRLPNDVSLPEA
Ga0222749_101190312	3300029636	Soil	MNLLTRRNFSSRKPFDQLNRTFTFFAHRRMSEQRSVYNGAGERGALMTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0222748_10904512	3300029701	Soil	EREAFMTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGFNGPLFDWY
Ga0311340_113242522	3300029943	Palsa	MAHPVSLVGAATLGVLLATSYAEAQTVHHRTHHPAAAGRQIIVRESVEPWLTLGTWAPVGSRQGYVLDTLSQPQSQRTANQQTIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0265393_12306012	3300030586	Soil	QTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETFQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY
Ga0210286_12956711	3300030597	Soil	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIERLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0265392_11192081	3300030623	Soil	MTHPVSLLGAAALGIILATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY
Ga0210250_100082031	3300030632	Soil	GAFMTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY
Ga0307482_11556622	3300030730	Hardwood Forest Soil	MTHPVSLLGAAALGIVLATSCAEAQTVHHRAHHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNEVSLPEANRPLIIASSPGLSGPWLQLY
Ga0307482_12009711	3300030730	Hardwood Forest Soil	YKRACEREAFMTHPVSLFGAVALGIVVASSCAEAQTVHHRAHHPTAAGRQITVHEGVAPWLTAGTGASVGSRNAYVLDTLRPPLRNTVQGTFVGMRGNDRLPNQYSLPQSNRPLIIVSWPGSNEPLFSWY
Ga0307482_12032982	3300030730	Hardwood Forest Soil	LGAAALGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRDSYVLDTLRPPQYQRTANQGSFSGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0265461_128051812	3300030743	Soil	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGIARLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0265461_132941741	3300030743	Soil	MTYPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY
Ga0265756_1108142	3300030805	Soil	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRDSYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0265746_10340172	3300030815	Soil	MIHPVSLLGAAALGIVLATSCADAQTVHHRAHHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETFQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0265753_11081812	3300030862	Soil	ERAAFMTHPVSLLGAAALGIIFATSCADAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNEVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0265772_1078831	3300030886	Soil	MTHPVSLLGAAALGIVFAMSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0138302_13960472	3300030937	Soil	MTHPVSLLGAAALGIVLATSSADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLRPPQSQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLDLY
Ga0170834_1073819331	3300031057	Forest Soil	SSERGAFMTYPVNLLRVVTLAIALASTSAEAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0170834_1107829861	3300031057	Forest Soil	MTHPVSLLGAAALGIVFAMSSADAQTVHHPAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0170822_133248561	3300031122	Forest Soil	MTYPVNLLRVVTLAIALASTSAEAQTVHHRAHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0170824_1136288461	3300031231	Forest Soil	MTHAVSLLGAAALGIALASSCAEAQEVHHRAHHPAVAGAAGRQIIVREGVEPWLTLGTWAPVGSRQAYAIDTFRPAQRTSNEGTFIGMRGLDRLPNDISLPQANRPLIIVSSPGLSGPLFDLY
Ga0170819_156023342	3300031469	Forest Soil	MAHPVSLLGAAALGILLATSCAQAQTAHHRVHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0318528_102591942	3300031561	Soil	MAHPVSLFGAVALGIVLASSLADAQTVRHHARQPAADGRQITVRKGVEPWLTLGTWAPVGSLNSYAIDTLRPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQSNRPLIIVSSPGLSDPLFSWY
Ga0310686_1008741619	3300031708	Soil	MTHTVSLLGAAALGIVLATSCADAQTVHHRAHHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLRPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0307476_107770072	3300031715	Hardwood Forest Soil	MTHPVSLFGAVALGIVVASSCAEAQTVHHRAHHPTAAGRQITVHEGVAPWLTAGTGASVGSRNAYVLDTLRPPLRNTIQGTFVGMRGNDRLPNQYSLPQSNRPL
Ga0307476_109477982	3300031715	Hardwood Forest Soil	MTHPVSLLGAAALGIVLATSCADAQTVHHGAKHPAATGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQ
Ga0307474_106373522	3300031718	Hardwood Forest Soil	MTHPVSLLGAAALGIVLATTCAEAQTVHHRAHHPAAAGRQITVHEGVAPWLTAGTGASVGSRNAYVLDTLRPPLRNTVQGTFVGMRGNDRLPNQYSLPQSNRPLIIVSWPGSNEPLFSWY
Ga0306917_109659402	3300031719	Soil	MAHPVSLFGAAALGIVLASSLADAQTVRHHARQPAADGRQITVRKGVEPWLTLGTWAPVGSLNSYAIDTLRPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQSNRPLIIVSSPGLS
Ga0307477_107036882	3300031753	Hardwood Forest Soil	MTHPVSLFGAVALGIVVASSCAEAQTVHHRAHHPTAAGRQITVHEGVAPWLTAGTGASVGSRNAYVLDTLRPPLRNTVQGTFVGMRGNDRLPNQYSLPQSNRPLIIVSWPGTNEPLFSWY
Ga0318566_106686841	3300031779	Soil	MAHPVSLFGAVALGIVLASSLADAQTVRHHARQPAADGRQITVRKGVEPWLTLGTWAPVGSLNSYALDTLRPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQANRPLIIVSSPGLSD
Ga0318557_105677411	3300031795	Soil	MAHPVSLFGAAALGIVLASSLADAQTVRHHARQPAADGRQITVRKGVEPWLTLGTWAPVGSLNSYAIDTLRPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQSNRPLIIVSS
Ga0318567_107111401	3300031821	Soil	ADAQTVRHHARQPAADGRQITVRKGVEPWLTLGTWAPVGSLNSYAIDTLRPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQSNRPLIIVSSPGLSDPLFSWY
Ga0307478_107305702	3300031823	Hardwood Forest Soil	MTHPVSLFGTVALGIVLASSCAAAQTVHHPAKHPVAGRQITVRKGVEPWLTLGTWAPVGSRQGYVLDTLRPPIQPRNSVQGTFVEMRGNDRLPNDIRLPEANRPLITVAWPGYN
Ga0306926_124406602	3300031954	Soil	MAHPVSLFGAVALGIVLASSSADAQTVRHHVLHPAADGRQITVRKGVEPWLTLGTWAPVGSRNSYALDTLNPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQSNRPLIIVSSPGLSDPLFSWY
Ga0318563_101794362	3300032009	Soil	SLADAQTVRHHARQPAADGRQITVRKGVEPWLTLGTWAPVGSLNSYAIDTLRPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQSNRPLIIVSSPGLSDPLFSWY
Ga0318533_105743922	3300032059	Soil	AQFSVEVASERGAFMAHPVSLFGAVALGIVLASSLADAQTVRHHARQPAADGRQITVRKGVEPWLTLGTWAPVGSLNSYAIDTLRPPQRNVIQGTFDAGRGWNSNRLPNDRTLPQSNRPLIIVSSPGLSDPLFSWY
Ga0316040_1214841	3300032121	Soil	LLGAAALGIVLATSCADAQTVHHRAHHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLRPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQMY
Ga0348332_114658311	3300032515	Plant Litter	TFFAHRRMSEPCSVYSGTGEGGALMAHPVSLVGAAALGILLATSCAEAQTVRHRTHHPAAAGRQIIVRQGVEPWLTLGTWAPVGSRQGYVLDTLSQPQAWRTANQETIQGVRGLDRLPNDVSLPEANRPLITVSAPGLSGPWLQMY
Ga0348332_133111712	3300032515	Plant Litter	MTHPVSLLGAAALGIVLATSCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLRPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLIIVSSPGLSGPWLQLY
Ga0348332_138664831	3300032515	Plant Litter	MSGPGFGVQYGAVRGALMTHPISLLGAAALGLALATSGAEAQTVHHKIHHPAAAGRQIIIREGVEPWLTLGTWAPVGSRQGYVLDTLSPPQAQRTANQETIQGVRGIDRLPNDVSLPEANRPLLIVSSPGLSGPWLQLY
Ga0315741_116324461	3300032739	Forest Soil	SDYTKGSFTFFAHRRMTEPCSVYNGTHERGALMAHPVSLLGAAALGIVLAASCADAQTVHHRAKHPAAAGRQITVSKGVEPWLTLGTWAPVGSRQGYVLDTLSPPQSQRTANQETFQGVRGIDRLPNEGSLPEANRPLLIVSSPGLSGPWLQLY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073796

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences