Metagenome / Metatranscriptome Family F073794

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F073794
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	114 residues
Representative Sequence	MADKQESVGRSVVSDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Number of Associated Samples	97
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.83 %
% of genes near scaffold ends (potentially truncated)	36.67 %
% of genes from short scaffolds (< 2000 bps)	88.33 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.833 % of family members)
Environment Ontology (ENVO)	Unclassified (27.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.24% β-sheet: 0.00% Coil/Unstructured: 32.76%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF06508	QueC	61.67
PF01138	RNase_PH	2.50
PF01053	Cys_Met_Meta_PP	2.50
PF03725	RNase_PH_C	1.67
PF02826	2-Hacid_dh_C	1.67
PF01725	Ham1p_like	0.83
PF00266	Aminotran_5	0.83
PF00924	MS_channel	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	61.67
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	61.67
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	61.67
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	61.67
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	61.67
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	61.67
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	61.67
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	61.67
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	61.67
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	4.17
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	4.17
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	4.17
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	2.50
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	2.50
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	2.50
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	2.50
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	2.50
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	2.50
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	2.50
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	2.50
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	2.50
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	2.50
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	2.50
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	0.83
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	90.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	58.33 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	58.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.00 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	58.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.00 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100247631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1670	Open in IMG/M
3300003308\|Ga0006777J48905_1109585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300003505\|JGIcombinedJ51221_10181034	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300004080\|Ga0062385_11027046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300004082\|Ga0062384_100139417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1359	Open in IMG/M
3300004082\|Ga0062384_100930997	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300004092\|Ga0062389_103483174	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300004631\|Ga0058899_12073183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300004631\|Ga0058899_12229613	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300005167\|Ga0066672_10229335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300005175\|Ga0066673_10487514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300005177\|Ga0066690_10256093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1175	Open in IMG/M
3300005332\|Ga0066388_101695696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1118	Open in IMG/M
3300005435\|Ga0070714_102458091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	506	Open in IMG/M
3300005436\|Ga0070713_100055053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3303	Open in IMG/M
3300005437\|Ga0070710_10485037	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300005437\|Ga0070710_10525127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300005437\|Ga0070710_11126797	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300005437\|Ga0070710_11244546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300005439\|Ga0070711_100864187	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300005560\|Ga0066670_10590873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300005561\|Ga0066699_10258610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1231	Open in IMG/M
3300005921\|Ga0070766_10153083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1414	Open in IMG/M
3300006031\|Ga0066651_10338385	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300006176\|Ga0070765_101087201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300006797\|Ga0066659_10821017	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006804\|Ga0079221_11551856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300006806\|Ga0079220_11768773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300006893\|Ga0073928_10294780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1221	Open in IMG/M
3300006914\|Ga0075436_100567366	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300007788\|Ga0099795_10429468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300009792\|Ga0126374_10601139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300010081\|Ga0127457_1073469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300010152\|Ga0126318_10038755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300010152\|Ga0126318_10126202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300010152\|Ga0126318_10130374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300010364\|Ga0134066_10162305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300010376\|Ga0126381_100230999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2494	Open in IMG/M
3300011120\|Ga0150983_14999180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300012202\|Ga0137363_11286390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300012212\|Ga0150985_112615998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	776	Open in IMG/M
3300012399\|Ga0134061_1130679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300016319\|Ga0182033_11997887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300018431\|Ga0066655_10260438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1112	Open in IMG/M
3300018431\|Ga0066655_10588862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300018433\|Ga0066667_10992162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300018468\|Ga0066662_11205957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300018482\|Ga0066669_10980373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300019361\|Ga0173482_10337812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300020579\|Ga0210407_10549387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300020580\|Ga0210403_10012385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6901	Open in IMG/M
3300020580\|Ga0210403_11436321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300020581\|Ga0210399_10091592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2477	Open in IMG/M
3300020581\|Ga0210399_11575452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300020582\|Ga0210395_10748905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300020583\|Ga0210401_10016003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7249	Open in IMG/M
3300020583\|Ga0210401_10028110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5365	Open in IMG/M
3300020583\|Ga0210401_10051348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3891	Open in IMG/M
3300020583\|Ga0210401_10583006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	980	Open in IMG/M
3300021151\|Ga0179584_1020077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300021151\|Ga0179584_1083288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300021170\|Ga0210400_10353649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1210	Open in IMG/M
3300021170\|Ga0210400_10361136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1196	Open in IMG/M
3300021171\|Ga0210405_10229621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1469	Open in IMG/M
3300021171\|Ga0210405_10294697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1282	Open in IMG/M
3300021178\|Ga0210408_10130702	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300021178\|Ga0210408_10369011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300021180\|Ga0210396_10114489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2435	Open in IMG/M
3300021180\|Ga0210396_10721783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300021180\|Ga0210396_11412733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300021181\|Ga0210388_10274580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1480	Open in IMG/M
3300021358\|Ga0213873_10052296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1085	Open in IMG/M
3300021374\|Ga0213881_10004081	All Organisms → cellular organisms → Bacteria → Proteobacteria	6094	Open in IMG/M
3300021377\|Ga0213874_10035279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1469	Open in IMG/M
3300021384\|Ga0213876_10592437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300021404\|Ga0210389_10270613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1330	Open in IMG/M
3300021406\|Ga0210386_10098076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2398	Open in IMG/M
3300021432\|Ga0210384_10469136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1133	Open in IMG/M
3300021432\|Ga0210384_10970113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300021441\|Ga0213871_10116291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300021474\|Ga0210390_10664619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300021478\|Ga0210402_10111147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2469	Open in IMG/M
3300021478\|Ga0210402_10598075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300021559\|Ga0210409_10240998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1639	Open in IMG/M
3300021559\|Ga0210409_10708372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300021560\|Ga0126371_10322947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1674	Open in IMG/M
3300022529\|Ga0242668_1024722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	937	Open in IMG/M
3300022532\|Ga0242655_10097125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300022533\|Ga0242662_10006536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2168	Open in IMG/M
3300022712\|Ga0242653_1006185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1358	Open in IMG/M
3300022718\|Ga0242675_1107011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300022726\|Ga0242654_10108176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300025320\|Ga0209171_10259998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	944	Open in IMG/M
3300025898\|Ga0207692_10228370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1106	Open in IMG/M
3300026547\|Ga0209156_10468006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300026998\|Ga0208369_1009573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300027069\|Ga0208859_1022929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300027070\|Ga0208365_1005994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300027073\|Ga0208366_1004195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1384	Open in IMG/M
3300027537\|Ga0209419_1023860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1129	Open in IMG/M
3300027583\|Ga0209527_1012753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1802	Open in IMG/M
3300027605\|Ga0209329_1002959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2773	Open in IMG/M
3300027610\|Ga0209528_1026060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1290	Open in IMG/M
3300027737\|Ga0209038_10041565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1372	Open in IMG/M
3300027783\|Ga0209448_10156192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300027812\|Ga0209656_10389911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300027824\|Ga0209040_10008479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7317	Open in IMG/M
3300028906\|Ga0308309_10140751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1929	Open in IMG/M
3300030905\|Ga0308200_1145058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031058\|Ga0308189_10325018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300031091\|Ga0308201_10100970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300031091\|Ga0308201_10252153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300031092\|Ga0308204_10207602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300031231\|Ga0170824_110392067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1189	Open in IMG/M
3300031469\|Ga0170819_16643066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300031474\|Ga0170818_103464848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300031564\|Ga0318573_10490366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300031723\|Ga0318493_10279846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300031753\|Ga0307477_10579778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300032261\|Ga0306920_104415774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	5.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Aquatic	Environmental → Aquatic	10.83%
Plants	Host-Associated → Plants	5.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.50%
Freshwater	Environmental → Aquatic → Freshwater	9.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.67%
Roots	Host-Associated → Plants → Roots	1.67%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.83%
Loam	Environmental → Terrestrial → Soil → Loam	21.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.50%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002476312	3300002245	Forest Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR*
Ga0006777J48905_11095851	3300003308	Avena Fatua Rhizosphere	MADKQESSGRSVVSDPNANRRNGDDSSGTALGQQASQALEGLRSVVEQASQVLRELTQAGSQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
JGIcombinedJ51221_101810342	3300003505	Forest Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGXWVQNTDRAREMAQGLRTQGEXAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR*
Ga0062385_110270462	3300004080	Bog Forest Soil	MADKQESVGRSVVGDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNSDRAREMAQGLRVQGEQAVGTLSRQVEQNPMMSLAIAFAMGYLLATMTRR*
Ga0062384_1001394172	3300004082	Bog Forest Soil	MAADKQESGVRSLVSDPNPGRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNSDRAREMAQGLRVQGEQAVGTLSRQVEQNPMMSLAIAFAMGYLLATMTRR*
Ga0062384_1009309971	3300004082	Bog Forest Soil	MAADKQESGARSLVSDPNAGRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQSGGQWVQNNDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0062389_1034831742	3300004092	Bog Forest Soil	MAADKQESGGRSVVSDPNAGRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNNDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYL
Ga0058899_120731832	3300004631	Forest Soil	MPAEKQESGARSVVSDPNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0058899_122296132	3300004631	Forest Soil	ADKQESVGRSVASDPNANRTNGGNSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR*
Ga0066672_102293352	3300005167	Soil	VADKQESVGRSVVSDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0066673_104875142	3300005175	Soil	VADKQEGVGRSVVSDPNANRTNGGDSGGAALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0066690_102560931	3300005177	Soil	VADKQESVGRSVVSDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0066388_1016956962	3300005332	Tropical Forest Soil	MPAEKHESGGRDPDAGRTNGGDGGTTALSQQASQALEGLRSVIERATQVLRDLTQAGGQWIQRGDRAQEMAQGLRVQGEEAVGTVSRQVEQNPMMSVAAAFAMGYLSATLTRR*
Ga0070714_1024580911	3300005435	Agricultural Soil	EAKAMAADKQETSGRSVVSDPNANRRNGDDSSGTALGQQASQALEGLRSVVEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0070713_1000550532	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAADKQESGSRSVVSDPNANRRNGDDSSGTALGQQASQALEGLRSVVEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0070710_104850372	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAADKQESSGRSVVSDPNANRRNGDDSSGTALGQQASQALEGLRSVVEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0070710_105251272	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPAEKQESGARSAVSDPNAGRTNSGDNAGGALGQQANQAIEGLRSVIEEASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATITRR*
Ga0070710_111267972	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPTEKQESGGRSVAGDPNAGRTNGGDNAGSALAQQANQAIEGLRSVIEQASQVLRDMTQAGSQWTQSSDRAREVAQGLRTQGEQYVGTVSQQVEQNPMISIGVAFAMGYLLATLTRR*
Ga0070710_112445462	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	NRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFAIGYLLATMTRR*
Ga0070711_1008641872	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TEKQESGGRSVAGDPNAGRTNGGDNAGSALAQQANQAIEGLRSVIEQASQVLRDMTQAGSQWTQSSDRAREVAQGLRTQGEQYVGTVSRQVEQNPMISIGVAFAMGYLLATLTRR*
Ga0066670_105908732	3300005560	Soil	MPAEKQESGARPVVSDPNADRTNGGDSAGTALGQQASQAIEGLRSVIEQASQVLRDLTQAGSQWVQNNDRAREIAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0066699_102586101	3300005561	Soil	MADKQESVGRSVVSDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0070766_101530831	3300005921	Soil	MPAEKQESGARSVVSDPNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMGQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFTMGYLLATMTRR*
Ga0066651_103383852	3300006031	Soil	MADKQESVGRSVVSDPNANRTNGGDSGGAALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0070765_1010872012	3300006176	Soil	MADKQESVGRSIVGDPNANRTNGGDGSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNGDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFTMGYLLATMTRR*
Ga0066659_108210171	3300006797	Soil	VADKQESVGRSVVSDPNAGRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNGDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0079221_115518562	3300006804	Agricultural Soil	AMPAEMQESGGRSVVNDPNVARTNGGDSGTTTLGQQASQAIEGLRAVIEQASQVLRDLTQAGNQWVQNSDRAREVAQGLRIQGEQYVGTVSRQVEQNPMASIAVAFAMGYLLATLTRR*
Ga0079220_117687731	3300006806	Agricultural Soil	MADKQETVGRSVVSDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNSDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0073928_102947803	3300006893	Iron-Sulfur Acid Spring	RTNGGDSGETALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQDSDRAREMAQGLRVQGEQAAGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR*
Ga0075436_1005673661	3300006914	Populus Rhizosphere	MAADKQESGSRSVVSDPNANRRNGDDSSGTALGQQASQALEGLRSVVEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIIFAMGYLLATMTRR*
Ga0099795_104294681	3300007788	Vadose Zone Soil	MADKQESIGRSVVSDPNANRTNGGDNSGTALGQQASQALEGLRSVIEQTSQVLRDLTQAGGQWVQNTDRAREMAQGLRTHGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR*
Ga0126374_106011392	3300009792	Tropical Forest Soil	MAREKESGGRSVIGDANAGRAIGGDIGGTVLGQQASQALEGFRSVIEQASQVLRELTQGGTQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSFAIAFAMGYLLATLTRR*
Ga0127457_10734692	3300010081	Grasslands Soil	SVADKQESVGRSVVSDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0126318_100387551	3300010152	Soil	AMPAEKQESGARSVASDPNANKTNGGDSTGTALGQQASQAIEGLRSVIEQASQVLRDLTQAGTQWVQNTDRAREVAQGLRTQGEQYVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0126318_101262021	3300010152	Soil	AKAMPADKQESGARSVVSDPNANKTNGGDSTGTALGQQASQAIEGLRSVIEQASQVVRDLTQAGNQWVQNNDRAREVAQGLRTQGEQYVGTVSRQVEQNPMLSIAVAFAMGYLLATMTRR
Ga0126318_101303742	3300010152	Soil	VVSDPNAARTNGGESGTNTLGQQASQTIEGLRSVIEQASQVLRDLTQAGNQWVQNSDRAREVAQGIRNQGEQYVGTVSRQVEQNPMISIGVAFAMGYLLATLTRR*
Ga0134066_101623051	3300010364	Grasslands Soil	VADKQESVDRWGVSDPHANSTPGGDSGRTALGQQASQPLEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0126381_1002309992	3300010376	Tropical Forest Soil	MPAEKHESGGRDPDAGRTNCGDGGTTALSQQASQALEGLRSVIERATQVLRDLTQAGGQWIQRGDRAQEMAQGLRVQGEEAVGTVSRQVEQNPMMSVAAAFAMGYLSATLTRR*
Ga0150983_149991802	3300011120	Forest Soil	MPAEKQESGARSVVSDPNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMGQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0137363_112863901	3300012202	Vadose Zone Soil	MAADKQESGGRSVVSDPNANRRNGDDSSGTALGQQASQALEGLRSVVEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0150985_1126159981	3300012212	Avena Fatua Rhizosphere	MADKQESVGRSVVSDPNANKTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNNDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0134061_11306792	3300012399	Grasslands Soil	AVADKQESVGRSVVSDPNANRTNSGDSSETGLGQQASQALEGLRSVIEQASQVLRDLTQTGSQWVQNNDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR*
Ga0182033_119978871	3300016319	Soil	VQRRECREPNRAARCWPKAIPAEKHESGGRGPDAGRTNCGDGGTTALSQQASQALEGLRSVIERATQVLRDLTQAGGQWIQRGDRAQEMAQGLRVQGEEAVGTVSRQVEQNPMMSVAAAFAMGYLSATLTRR
Ga0066655_102604381	3300018431	Grasslands Soil	AEKQESGARTVVSDPNAGRTNGGGDSAGTALGEQASQAIEGLRSVIEQASQVLRDMTQAGSQWVQNNDRAREMAQGLRTQSEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0066655_105888621	3300018431	Grasslands Soil	VADKQESVGRSVVSDPNANRTNGGDSGGAALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0066667_109921621	3300018433	Grasslands Soil	MADKQESVGRSVVSDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASHVLRDLTQAGGQWVQNNDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0066662_112059571	3300018468	Grasslands Soil	VADKQESVGRSVVSDPNTNRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0066669_109803732	3300018482	Grasslands Soil	VADKQESVGRSVVSDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0173482_103378121	3300019361	Soil	MPAEKQESGGRSVAGDPNAGRTNGGDNAGSALAQQANQAIEGLRSVIEQASQVLRDMTQAGSQWTQSSDRAREVAQGLRTQGEQYVGTVSRQVEQNPMISIGVAFAMGYLLATLTRR
Ga0210407_105493871	3300020579	Soil	GDGSGIALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVPNNDRAREMAQGLRVQGEQAVGTVSRQIEQNPMVSLGIAFAMGYLLATMTRR
Ga0210403_100123859	3300020580	Soil	MPAEKQESGARSVVGDPNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210403_114363211	3300020580	Soil	MADKQESVGRSVASDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAF
Ga0210399_100915924	3300020581	Soil	MADEQESVGRSVAGEPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210399_115754521	3300020581	Soil	MADKQESVGRSVASDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210395_107489052	3300020582	Soil	MADEQESVGRSVAGEPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRMQGEQAVGTVSRHVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210401_100160032	3300020583	Soil	MADKQESVGRAVVSDPNPNRTNGGDGSGIALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVPNNDRAREMAQGLRVQGEQAVGTVSRQIEQNPMVSLGIAFAMGYLLATMTRR
Ga0210401_100281107	3300020583	Soil	MADEQEESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210401_100513486	3300020583	Soil	MPAEKQESGARSAVSDPNAGRTNSGDNAGGALGQQANQAIEGLRSVIEQTSQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210401_105830062	3300020583	Soil	MADKQESVGRSIVGDPNANRTNGGDGSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNGDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFTMGYLLATMTRR
Ga0179584_10200771	3300021151	Vadose Zone Soil	AMADKQESVGRSVVSDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0179584_10832881	3300021151	Vadose Zone Soil	VEEAKAMAADKQESGGRSVVSDPNANRRNGDDSSGTALGPPASQALEGLRSVVEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210400_103536491	3300021170	Soil	MPAEKQESGARSVVSDPNAGRTNSGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210400_103611363	3300021170	Soil	THGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210405_102296213	3300021171	Soil	THGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210405_102946973	3300021171	Soil	GGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRARGMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210408_101307021	3300021178	Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210408_103690112	3300021178	Soil	RSAVSDPNAGRTNSGDNAGGALGQQANQAIEGLRSVIEQTSQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210396_101144894	3300021180	Soil	MPAEKQESGARSVVSDPNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREVAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210396_107217832	3300021180	Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTAAERRV
Ga0210396_114127331	3300021180	Soil	MADKQESVGRSIVGDPNANRTNGGDGSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNGDRAREMAQGLRVQGEQAVGTVSRQVEQNPVMSLAIAFTMGYLLATMTRR
Ga0210388_102745801	3300021181	Soil	MADEQESVGRSVAGAPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0213873_100522962	3300021358	Rhizosphere	MAAEKQETESRPETGPARTDGGDSGGAALGRQATETLERLRSVVDQASQSLREFGQATGQWMQSSDRARDMAQGLRTQGEQYVGTVSRQVEQNPMISVAIAFALGYLLASMTRR
Ga0213881_100040815	3300021374	Exposed Rock	MPAEKQETSGRSVISDPNAGRADGGEGGAAALGHQATQALEGLRSVIDQATQVLRDLTQAGGQWMQNGDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSVAVAFAMGYLLATLTRR
Ga0213874_100352792	3300021377	Plant Roots	MPAEKQETSGRSVISDPNAGRADGGEGGAAALGHQATQALEGLRSVIDQATQVLRDLTQAGGQWMQNGDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSVAVAFAMGYLLATLTRR
Ga0213876_105924371	3300021384	Plant Roots	MPAEKQESGARSVVSDPKANKTNGGDDSGTALGQQASQALEGLRSVIEQASQVLQDLTQAGTQWVQNSDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATITRR
Ga0210389_102706132	3300021404	Soil	MADEQESVGRSVAGEPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMPRR
Ga0210386_100980764	3300021406	Soil	SIVGDPNANRTNGGDGSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNGDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFTMGYLLATMTRR
Ga0210384_104691362	3300021432	Soil	MADEQESVGRSVAGEPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210384_109701132	3300021432	Soil	MADKQESVGRAVVSDPNPNRTNGGDGSGIALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVPNNDRAREMAQGLRVQGEQAVGTVSRQIEQNPMVSLGIAFAMGY
Ga0213871_101162912	3300021441	Rhizosphere	MAAEKQESAARSETSPARTDGGQSGGAALGQQATETLERLRSVVDQASQSLREFGQATGQWMQSSDRARDMAQGLRTQGEQYVGTVSRQVEQNPMISVAIAFALGYLLASMTRR
Ga0210390_106646191	3300021474	Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210402_101111473	3300021478	Soil	MADKQESVGRSVVSDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRARGMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210402_105980751	3300021478	Soil	GGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0210409_102409983	3300021559	Soil	MPAEKQESGARSVVSDPNAGRTNSGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0210409_107083721	3300021559	Soil	NANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0126371_103229472	3300021560	Tropical Forest Soil	MPAEKQESGGRAVVGDATAARTNGGDSGGTALGQQATQALEGLRSVIEQASQALRDLTQASGQWAQSADRAKEMAQGLRTQGEQYVGTVTRQVEQNPMMSVVIAFGLGYLLATLTRR
Ga0242668_10247221	3300022529	Soil	DKQESVGRSIVGDPNANRTNGGAGSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNDDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFTMGYLLATMTRR
Ga0242655_100971251	3300022532	Soil	MADKQESVGRSVASDPNANRTNGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0242662_100065362	3300022533	Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQASQALEGLRSVIEQASQVMRDLTQAGGQWVQKTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0242653_10061851	3300022712	Soil	RSVVSDPNAGRTNSGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREVAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0242675_11070112	3300022718	Soil	ADKQESVGRAVVSDPNPNRTNGGDGSGIALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVPNNDRAREMAQGLRVQGEQAVGTVSRQIEQNPMVSLGIAFAMGYLLATMTRR
Ga0242654_101081762	3300022726	Soil	MADKQESVGRSIVGDPNANRTNGGDGSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0209171_102599982	3300025320	Iron-Sulfur Acid Spring	RTNGGDSGETALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQDSDRAREMAQGLRVQGEQAAGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0207692_102283702	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAADKQESSGRSVVSDPNANRRNGDDSSGTALGQQASQALEGLRSVVEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0209156_104680062	3300026547	Soil	GQAVADKQESVGRSVVSDPNANRTNGGDSGGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0208369_10095732	3300026998	Forest Soil	MPAEKQESGARSVVSDPNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0208859_10229291	3300027069	Forest Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMT
Ga0208365_10059942	3300027070	Forest Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0208366_10041953	3300027073	Forest Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQANQALEGLRSVIEQAAQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0209419_10238602	3300027537	Forest Soil	MADKQESVGRSVASDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFTMGYLLATMTRR
Ga0209527_10127531	3300027583	Forest Soil	MADEQESVGRSVAGDPNANRTHGGDSSGTALGQQASQALEGLRSVVEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEHAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0209329_10029592	3300027605	Forest Soil	MADEQESVGRSVVSDPNANRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRARGMAQGLRVQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0209528_10260601	3300027610	Forest Soil	PNANRTNGGDSSGTALGPQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0209038_100415653	3300027737	Bog Forest Soil	MAADKQESGARSLVSDPNAGRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQSGGQWVQNNDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMTFSWI
Ga0209448_101561922	3300027783	Bog Forest Soil	MAADKQESGGRSVVSDPNAGRTNGGDSSGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNNDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLL
Ga0209656_103899111	3300027812	Bog Forest Soil	GGDTNGNALGRQATEALEGLRSVIEQASQVLRDVVQAGGQWTQGADRTREVAQGLRVQGEQAVGTVSRQVEHNPMMSLAIAFGMGYLLATITRR
Ga0209040_100084796	3300027824	Bog Forest Soil	MAAEKQESGARSLVSDASGNRTGGGDSNGNPLGRQATEALEGLRSVIEQASQVLRDVVQAGGQWTQGADRAREVAQGLRVQGEQAVGTVSRQVEHNPMMSLAIAFGMGYLLATITRR
Ga0308309_101407513	3300028906	Soil	MPAEKQESGARSVVSDPNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQTGSQWVQNTDRAREMGQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFVMGYLLATMTRR
Ga0308200_11450581	3300030905	Soil	MADKQESVGRSVVSDPNANRTNGGDSSGAALGQQASQALEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0308189_103250181	3300031058	Soil	EAKAMADKQESVGRSVVSDPNANRTNGGDSAGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNSDRAREMAQGLRTQGEQAVGTMSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0308201_101009702	3300031091	Soil	MADKQESVGRSVVSDPNANRTNGGDSAGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNSDRTREMAQGLRTQGEQAVGTMSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0308201_102521532	3300031091	Soil	AQAMADKQESVGRSVVSDPNANRTNGGDSSGAALGQQASQALEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0308204_102076022	3300031092	Soil	EEAKAMADKQESVGRSVVSDPNANRTNGGDSAGTALGQQASQALEGLRSVIEQASQVLRDLTQAGGQWVQNNDRTREMAQGLRVQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTR
Ga0170824_1103920672	3300031231	Forest Soil	MPAEKQESGARSVVSDPIANKTNGGDSSGNVLGQQASQAIEGLRSVIEQASQVLRDLTQTGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0170819_166430661	3300031469	Forest Soil	PAEKQESGARSVVSDPIANKTNGGDSSGSVLGQQATQAIEGLRSVIEQASQVLRDLTQTGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0170818_1034648482	3300031474	Forest Soil	ANKTNGGDSSGSVLGQQATQAIEGLRSVIEQASQVLRDLTQTGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0318573_104903662	3300031564	Soil	MPAEKQESGAHSAVTDLNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTRR
Ga0318493_102798461	3300031723	Soil	MPAEKQESGAHSAVTDLNAGRTNGGDNAGGALGQQANQAIEGLRSVIEQASQVLRDLTQAGSQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAVAFAMGYLLATMTR
Ga0307477_105797781	3300031753	Hardwood Forest Soil	DPNANRTHGGDSSGTALGQQANQALEGLRSVIEQASQVLRDLTQAGGQWVQNTDRAREMAQGLRTQGEQAVGTVSRQVEQNPMMSLAIAFAMGYLLATMTRR
Ga0306920_1044157741	3300032261	Soil	MPAEKQESSGRAVVGDPNAGRTNGGDSGATVLGQQATQALEGLRSVIDQATQVLRDLTQAGGQWMQNGDRAREMAHGLRVQGEQAVGTVSRQVEQNPMISVAVAFAMGYLLATLTRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073794

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences