Metagenome / Metatranscriptome Family F073769

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073769
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	119 residues
Representative Sequence	FDDKLDGYIGQVLELVDEHPEAMAFLSDSARVLWPRSGPAVRRQTMIGLARSLMSQAPQPRGKSAVSPDIVAASLQGTLAEFARMLQVGVIPGPAVRWKADLVRLFRRVAA
Number of Associated Samples	98
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.83 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere (7.500 % of family members)
Environment Ontology (ENVO)	Unclassified (45.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.15% β-sheet: 0.00% Coil/Unstructured: 38.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d1vi0a2	1vi0	0.70221
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d1zk8a2	1zk8	0.68814
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d1t33a2	1t33	0.67837
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d4jyka2	4jyk	0.67796
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d2gena2	2gen	0.67461

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13460	NAD_binding_10	15.83
PF03435	Sacchrp_dh_NADP	7.50
PF12697	Abhydrolase_6	5.00
PF12146	Hydrolase_4	3.33
PF00743	FMO-like	0.83
PF01300	Sua5_yciO_yrdC	0.83
PF13540	RCC1_2	0.83
PF00440	TetR_N	0.83
PF00753	Lactamase_B	0.83
PF12704	MacB_PCD	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	89.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	89.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	89.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	89.17 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	89.17 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	89.17 %
unclassified Polaromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	89.17 %
Polaromonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10308539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300001686\|C688J18823_10704315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300003987\|Ga0055471_10154110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300003996\|Ga0055467_10115838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300004156\|Ga0062589_102779991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300004157\|Ga0062590_102308712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300004480\|Ga0062592_100943000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300005093\|Ga0062594_100508388	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005328\|Ga0070676_11439094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005330\|Ga0070690_101773391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300005332\|Ga0066388_100373620	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300005332\|Ga0066388_100487745	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300005332\|Ga0066388_104674333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300005332\|Ga0066388_107240886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005337\|Ga0070682_101285925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005339\|Ga0070660_101587572	Not Available	557	Open in IMG/M
3300005340\|Ga0070689_102212874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005354\|Ga0070675_102249086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005355\|Ga0070671_100905584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300005444\|Ga0070694_101546489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005455\|Ga0070663_101496820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005471\|Ga0070698_100592602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300005546\|Ga0070696_100496333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300005554\|Ga0066661_10559404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300005578\|Ga0068854_101735695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005616\|Ga0068852_100588425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300005618\|Ga0068864_101451623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300005764\|Ga0066903_102743721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300005764\|Ga0066903_104951414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300005764\|Ga0066903_107962979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005764\|Ga0066903_108982351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005841\|Ga0068863_102719833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.	503	Open in IMG/M
3300005843\|Ga0068860_100443892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300005843\|Ga0068860_102492012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300006178\|Ga0075367_10243223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300006237\|Ga0097621_100463312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300006577\|Ga0074050_11944130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300006581\|Ga0074048_12737645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300006606\|Ga0074062_12865647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300006755\|Ga0079222_10784041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300006871\|Ga0075434_101427854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300006871\|Ga0075434_101542771	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300006881\|Ga0068865_100469668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300006881\|Ga0068865_100733390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300006881\|Ga0068865_101848901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300007076\|Ga0075435_101281609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300009090\|Ga0099827_10128524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2049	Open in IMG/M
3300009100\|Ga0075418_12748789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009101\|Ga0105247_11005505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300009177\|Ga0105248_10052543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4572	Open in IMG/M
3300009177\|Ga0105248_10452230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300009177\|Ga0105248_11228451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300009177\|Ga0105248_12329491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009553\|Ga0105249_10573248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300010358\|Ga0126370_11213165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300010359\|Ga0126376_12540273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300010364\|Ga0134066_10148006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300010366\|Ga0126379_11755293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300010396\|Ga0134126_11427935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300010398\|Ga0126383_12531898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300010401\|Ga0134121_11416734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300011444\|Ga0137463_1236041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300011444\|Ga0137463_1236363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012210\|Ga0137378_10595836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300012469\|Ga0150984_110862669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300012517\|Ga0157354_1050726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012922\|Ga0137394_11048672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300012948\|Ga0126375_10731013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300012972\|Ga0134077_10159991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300012985\|Ga0164308_11815463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300012986\|Ga0164304_11780290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300013297\|Ga0157378_12913268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300013308\|Ga0157375_10203011	All Organisms → cellular organisms → Bacteria → Proteobacteria	2138	Open in IMG/M
3300013308\|Ga0157375_11361554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300014311\|Ga0075322_1164299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300014745\|Ga0157377_10586354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300014745\|Ga0157377_10635257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300015201\|Ga0173478_10827035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300015373\|Ga0132257_104152003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300016371\|Ga0182034_11585453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300017939\|Ga0187775_10207162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300017966\|Ga0187776_11035041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300018089\|Ga0187774_10424184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300019356\|Ga0173481_10860202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300019361\|Ga0173482_10059145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300022886\|Ga0247746_1079155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300022899\|Ga0247795_1052464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300023066\|Ga0247793_1084438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300024055\|Ga0247794_10004051	All Organisms → cellular organisms → Bacteria → Proteobacteria	3083	Open in IMG/M
3300025907\|Ga0207645_11118625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300025917\|Ga0207660_11552682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300025920\|Ga0207649_11410259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300025931\|Ga0207644_10751902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300025932\|Ga0207690_10639260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300025934\|Ga0207686_10677137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300025936\|Ga0207670_11564180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300025937\|Ga0207669_11262900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300025938\|Ga0207704_10283124	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300025938\|Ga0207704_10336646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170	Open in IMG/M
3300025938\|Ga0207704_11362590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300025941\|Ga0207711_10065754	All Organisms → cellular organisms → Bacteria → Proteobacteria	3135	Open in IMG/M
3300025941\|Ga0207711_11247871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300025941\|Ga0207711_11631485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300025960\|Ga0207651_10862249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300026035\|Ga0207703_11583456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300026088\|Ga0207641_12306088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300026095\|Ga0207676_11396408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300031716\|Ga0310813_11026237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300031716\|Ga0310813_11647252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300031744\|Ga0306918_10659856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300031765\|Ga0318554_10330288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300031903\|Ga0307407_11079337	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031938\|Ga0308175_100405669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1425	Open in IMG/M
3300031946\|Ga0310910_10643406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300031954\|Ga0306926_11907889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300032001\|Ga0306922_11538241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300032074\|Ga0308173_11753389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300032179\|Ga0310889_10176357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300033433\|Ga0326726_10056209	All Organisms → cellular organisms → Bacteria	3449	Open in IMG/M
3300034115\|Ga0364945_0190806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.33%
Host-Associated	Host-Associated	41.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.00%
Plants	Host-Associated → Plants	41.67%
Aquatic	Environmental → Aquatic	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.33%
Marine	Environmental → Aquatic → Marine	1.67%
Sediment	Environmental → Aquatic → Sediment	1.67%
Roots	Host-Associated → Plants → Roots	1.67%
Peat	Environmental → Terrestrial → Peat	0.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.33%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	7.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_103085392	3300001686	Soil	ERYIGAILELVDEHPDAMAFLSDSARVLWPKSGAKVRRHTMIGLARDLMSLAPRSGRGGRIVNPDIAAASLQGTLAELARMLQVGAIPGPATRWKADLVALFRRMSA*
C688J18823_107043151	3300001686	Soil	FDAKLEGYIGEILELVDEHPEAMAFLSDSARVLWPKAGATVRRHTMIGLARDLMSLAPRSARGGRPVNPDIAAASLQGTLAELARMLQVGAIPGPATRWKADLVALFRRVSA*
Ga0055471_101541101	3300003987	Natural And Restored Wetlands	FEAKLENYIGEVLALVDEHPEAMAFLSENARVLWPKSGAAVRRQTIIALARSLMSAAPHAGKRSAIHPDIAAASLQGTLAELTRMIQVGAVRGPAISWKSELVKLFRNILTA*
Ga0055467_101158381	3300003996	Natural And Restored Wetlands	GAVLLLVDEQPEAMAFLSENARVLWPKAGPAVRRQTMIGLARSLMSAAPRTAKGAAVHPDIAAASLQGTLAELARMIQVGAVRGPARSWKAELVKFFRKTAA*
Ga0062589_1027799911	3300004156	Soil	AVVSAKTFDEKLEGYVGRWLELVDEHPEVVAFLSDSARVLWPKAGPIVRRHTMIGLARSLVLEAPRFRRGARPVNPDLAAASLQGTLAELTRMLQVGVVDGPAVRWKGELVTLFRRLVG*
Ga0062590_1023087122	3300004157	Soil	DKLEAHIGQVLELVDEHPDAMAFLSESARVLWPKAGPSVRRHTMIGLARELMSHAPRPRRGQAALNLDLAAASLQGTLAELARMLEVGVVPGPAVRWKADLVALFSRVSA*
Ga0062592_1009430001	3300004480	Soil	DSFEDKLEGYIGQFLQLVDEHPETVAFLSDSARVLWPKAGPAVRRQTMIGLARSLMIKAPRSRRGRSGFNPDVAAASLQGTLAELARMLQVGVVPGPAVRWKSELVRFFLRLAG*
Ga0062594_1005083882	3300005093	Soil	SATDFDGKLENYIGEVLALVDEHPEAMAFLSENARVLWPKAGPAVRRHTMIALAGSLMSTAPHAGKASAVHPDIAAAALQGTLAELARMIQVGAVRGPALRWKADLVKFFRKSAA*
Ga0070676_114390941	3300005328	Miscanthus Rhizosphere	SHRRLWSRCHAAIESATDFEGRLDNYIGEVLSLVDEHPEAMAFLSENARVLWPKAGPAVRRQTMIALARSLMSAAPRTGKGSAVHPDIAAASLQGTLAELARMIQVGAVRGPARSWKAELVKLFRKTAAA*
Ga0070690_1017733911	3300005330	Switchgrass Rhizosphere	RRMWTRCHAAVASADGFDDKLEGYIGQWLELVDEHPEVVAFLSDSARVLWPKAGPAVRQQTMIGLARSLMIKAQTRRGTSAVNPDVAAASLQGTLAELTRMLQVGVLAGPAVRWKDELVTLFRRLAV*
Ga0066388_1003736201	3300005332	Tropical Forest Soil	AAKGFDAKLEGYIGQVLALVDEHPEAMAFLSDSARVLWPQAGPAVRRQTMIDLARSLMSAAPRPRRGKSAVNLDVAAASLQGTLAELARMIQVGAVAGPAVRWKTELVALFRKIAGV*
Ga0066388_1004877453	3300005332	Tropical Forest Soil	DAYIGEVLELVDENPEAMAFLSDSARVLWPKAGPTVRRQTMIDLARSLMSLAPRSHRGRGPVNRDVAAASLQGTLAELARMLQVGAVPGPAIRWKKDLVEFFLKIAG*
Ga0066388_1046743331	3300005332	Tropical Forest Soil	LYLFENCHRRLWTKCNAAILAAKSFDDKLEGYIGQVLELVDEHPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQPRRGTSTVNSDVLAASLQGTLAEIARMLQVGVIPGPAVRWKADLVGLFRRAVA*
Ga0066388_1072408861	3300005332	Tropical Forest Soil	ETCHRRLWTRCSAAVEAAKGFDAKLDGYIGEILELVDEHPEAMAFLSDSARVLWPKARPTVRRHTMIGLARDLMSLASRSRHGRPAVNPDVAAASLQGTLAELARMLQVGVVPGPAVRWKKDLVSLFKRVGG*
Ga0070682_1012859252	3300005337	Corn Rhizosphere	CHRRLWAKCNAAILAAESFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQVRRGKSTISVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVKLFRRVGS*
Ga0070660_1015875721	3300005339	Corn Rhizosphere	IYLFEICHRRLWTRCHAALNAAKSFDAKLEGYISQVLELVDEDPEAMAFLSDSARVLRPLAGPAVRRQTMIDLARSLMSAAPRGRGRRSSVDVAAASLQGTLAELARMIQIGDAPGPAVRWKAELVGLFRKIATA*
Ga0070689_1022128741	3300005340	Switchgrass Rhizosphere	KCHAAVTAAGSFDAKLDGYIGQVLELVDEHPDAMAFLSENARVLWPKSGVAVRRHTMIGLARSLMGTAPRSRGAGRRIQADVAAASLQGTLAEIARMLQVGVIPGPAVLWKPELVALFRKIAA*
Ga0070675_1022490861	3300005354	Miscanthus Rhizosphere	SFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQARRGKSTVSVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG*
Ga0070671_1009055842	3300005355	Switchgrass Rhizosphere	DKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQVRRGKSTISVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVKLFRRVGS*
Ga0070694_1015464892	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NAAVASAEGFGDKLEGYIGQWLELVDEHPEVVAFLSDSARVLWPKAGPAVRQQTMIGLARSLMIKAQTRRGTSAVNPDVAAASLQGTLAELTRMLQVGVLAGPAVRWKDELVTLFRRLAV
Ga0070663_1014968202	3300005455	Corn Rhizosphere	TRCNAAVVSAEGFGDKLEGYIGQWLELVDEHPEVVAFLSDSARVLWPKAGAVVRQQTMIGLARSLMIKAPTRRGVPAVNADVGAASLQGTLAELTRMLQVGVLAGPAVRWKDELVTLFRKLVV*
Ga0070698_1005926021	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ALHLFETCHRRLWAKCHAAIGSANSFQGKLEGYIGQYLELVDEHPEAMAFLSDSARVLWPKAGPAIQRQTMIGLARSLMMRAPQLRRGRSALNPDVAAASLQGTLAELTRMLQVKVISGPAVRWKGELVTFFRRLAG*
Ga0070696_1004963332	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DAAKSFDGKLEAYIDQVLALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGLARSLMSLAPRPPRSRSAVHPDVVAASLQGTLAELARMLQVGVIAGPAIRWKADLVSLFRKVGA*
Ga0066661_105594041	3300005554	Soil	ELMDEDPEALAFLSDSARVLWPKASKAVRQQTMIGLARSLMTAAPQRRGRKPAVNPDVAAATLQGTLAELARMLQVGVIAGPAVRWKGELVGLFRKVVA*
Ga0068854_1017356951	3300005578	Corn Rhizosphere	ETCHRRLWTKCHAAIVAANSFDAKLEGYISQILELFDEDPEAMAFLSDSARVLWPLAGPAVRRHTMIDLARSLMTSAPRRRGSKSSVDVAAASLQGTLAELARMIQVGDVPGPAVRWKAELVGLFRKIATP*
Ga0068852_1005884251	3300005616	Corn Rhizosphere	VHLFETCHRRVWTKCKDAIDAAEGPDGKLAAYVGQILELVDEHPEVIAFLSENGRVLWPKTGPAARRHTMIGLARSLMTLGRRPRRGARLDPDVMAASLQGTLAELMRMVHVGVIPGPAVRWKTKLVALFRRVAA*
Ga0068864_1014516232	3300005618	Switchgrass Rhizosphere	GQWLELVDEHPEVVAFLSDSARVLWPKAGPAVRQQTMIGLARSLMIKAQTRRGTSAVNPDVAAASLQGTLAELTRMLQVGVLAGPAVRWKDELVTLFRRLAV*
Ga0066903_1027437211	3300005764	Tropical Forest Soil	AMAFLSDSARVLWPLAGPVVRRHTMIGLARTLMSGMPRSKRRTSGAALDVAAASLQGTLAELARMIHVGAAQGPAARWKPELVALFRKIGAS*
Ga0066903_1049514142	3300005764	Tropical Forest Soil	FASKEELAVHLFETCHQRLWTRCNAAVEAATSFDAKLEGYIGQSLQLVDEHPEAMAFLSDSARVLWPKAGSSVRRHTMIGLARDLMTLAPRSRGGARPINSDVAAASLQGTLAELARMLQLGVVPGPAMRWKADLVALFKRVSA*
Ga0066903_1079629791	3300005764	Tropical Forest Soil	KDFDGKLEHYIGEVLSLVDEHPEAMAFLSENARVLWPKAGPDVRRHTMIALARSLMNSAPRVARGRAVHPDVAAASLQGTLAELARMIQVGVVRGPALGWKAELVKFFQKAATA*
Ga0066903_1089823512	3300005764	Tropical Forest Soil	IGQVLELVDEQPEAMAFLSDSARVLWPKAGPKVRRHTMIGLARSLMILAPKPRRGHPALNPDVAAASLQGTLGELARMLQVGVVTGPAVRWKPDLVALFRRIAAQS*
Ga0068863_1027198331	3300005841	Switchgrass Rhizosphere	IESATDFDGKLENYIGEVLALVDEHPEAMAFLSENARVLWPKAGPAVRRHTMIALAGSLMSTAPHAGKASAVHPDIAAAALQGTLAELARMIQVGAVRGPALRWKADLVKFFRKSAA*
Ga0068860_1004438923	3300005843	Switchgrass Rhizosphere	LEGYIGQFLQLVDEHPETVAFLSDSARVLWPKAGPAVRRQTMIGLARSLMIKAPRSCRGRSGFNPDVAAASLQGTLAELARMLQVGVVPGPAVRWKSELVRFFLRLAG*
Ga0068860_1024920122	3300005843	Switchgrass Rhizosphere	GRWLELVDEHPEVVAFLSDSARVLWPKAGPIVRRHTMIGLARSLVLEAPRFRRGARPVNPDLAAASLQGTLAELTRMLQVGVVDGPAVRWKGELVTLFRRLV*
Ga0075367_102432231	3300006178	Populus Endosphere	TCHRAIENSTGFDAKLEAYVGQVLELFDQHPDVMAFLSDSARVLWPLAGTAVKRHTMIDLARSLMETDVAAASLQGTLAELARMIQVGAVKGPATRWKPELVALFRKIAAA*
Ga0097621_1004633122	3300006237	Miscanthus Rhizosphere	LALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGMARSLMSLAPRAPGAGPAVHPDVVAASLQGTLAELGRMLQVGVVAGPAMRWKADLVALFRRVGA*
Ga0074050_119441301	3300006577	Soil	GKEELALYLFENCHRRLWTKCNAAILAATSFDDKLDAYIGQVLELVDEHPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPRPRRGKSTISPDVVAASLQGTLAELARMLQVGVIPGPAVRWKAHLVGLFRKVAA*
Ga0074048_127376452	3300006581	Soil	AKSFDDKLDAYIGQVLALVDEHPDAMAFLSDSARVLWPKSGPAIRRQTMIGLARSLMSQAPQPSRGKSTISPDVVAASLQGTLAEVARMLQVGVIPGPAVRWKAHLVGLFRKVAA*
Ga0074062_128656472	3300006606	Soil	HRRLWTKCNAAILAATSFDDKLDAYIGQVLELVDEHPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPRPRRGKSTISPDVVAASLQGTLAEVARMLQVGVIPGPAVRWKAHLVGLFRKVAA*
Ga0079222_107840412	3300006755	Agricultural Soil	QHPDVMAFLSDSARVLWPLAGTAVKRHTMIDLARSLMQTDVAAASLQGTLAELARMIQVGAVKGPATRWKPELVALFRKIHGA*
Ga0075434_1014278541	3300006871	Populus Rhizosphere	FETCHRRLWTKCHAAIVGAKTFEAKLEGYIGQVLELVDEDPDAMAFLSDSARVLWPKAGPLVRRQTMIGLAQSLMSAAPRARGGRPAVDVTVAAASLQGTLAELARMIQVGAVSGPASRWTGHVVTFFQRIAAA*
Ga0075434_1015427712	3300006871	Populus Rhizosphere	LFETCHQRLWSRCHAAIEAGTTFDAKLEGYIGQVLELVDEHPEAMAFLSDSARVLWPKAGAAVRRHTMIGLARDLMSLAPRSRRGEPAVNPEVAAASVQGTLAELARMLQVGVVPGPAARWKSDLVAVFRRVAG*
Ga0068865_1004696681	3300006881	Miscanthus Rhizosphere	EGYIGQFLELMDEDPEALAFLSDSARVLWPKAGKAVRQQTMIGLARSLMTMAPQRRGRKAAVNPDVAAASLQGTLAELARMLQVGVIAGPAVRWKAELVTLFRKIVA*
Ga0068865_1007333901	3300006881	Miscanthus Rhizosphere	AKCNAAILAAGSFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQARRGKSTVSVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG*
Ga0068865_1018489011	3300006881	Miscanthus Rhizosphere	SKEELALQLFDICHRRLWARCNAAIASANNFDDKLDGYVGQFLELMDEDPEALAFLSDSARVLWPKAGKAVRQQTMIGLARSLMTTAPRRRGKSAVNPDVAAASLQGTLAELARMLQVGVIAGPAIRWKGDLVTCFRKLVA*
Ga0075435_1012816091	3300007076	Populus Rhizosphere	ETCHRRLWTKCHAAIVRAKSFDAKLEGYIGQVLELVDEDPDAMAFLSDSARVRWPKAGPVVRRQTMIGLAQSLMSVVPRTHGSRPVDATVAAASLQGTLAELARMIQVGAVSGPAMQWKDHLVRFFRRIVAA*
Ga0099827_101285244	3300009090	Vadose Zone Soil	VGALQRVIGLRERFDEKLERYVGQWLELVDTHPDVVAFLSDSARVLWPKASPTVRRQSLIGLAHSLVLETPKRRRGPSAVSPDLTAASLQGTLGEVARMIQVGVLDGPAVRWKAGLVALFQRLAA*
Ga0075418_127487891	3300009100	Populus Rhizosphere	VDEHPEAMAFLSENARVLWPKAGPAVQRQTMIALARSLMRAAPRATKRSAIHPVIAAATLQGTLAELARMIQVGAVSGPAISWKAELVKLFRKIVA*
Ga0105247_110055052	3300009101	Switchgrass Rhizosphere	VDQHPDVMAFLSDSARQLWPLAGPAVKRHTMIDLARSLMSAAPRPRGGGSAVNIDVAAASVQGTLAELARMIQVGAVPGPAMRWKPELVALFRKIATGAA*
Ga0105248_100525439	3300009177	Switchgrass Rhizosphere	EAYIGQVLALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGMARSLMSLAPRAPGAGPAVHPDVVAASLQGTLAELGRMLQVGVVAGPAMRWKADLVALFRRVGA*
Ga0105248_104522303	3300009177	Switchgrass Rhizosphere	AAKGFDDKLDGYIGQVLELVDEHPEAMAFLSDSARVLWPRSGPAVRRHTMIGLARSLMSQAPQPRGKSAVSPDIVAASLQGTLAEFARMLHVGVIPGPAVRWKADLVRLFRRVAA*
Ga0105248_112284511	3300009177	Switchgrass Rhizosphere	SAIVAAGTFDEKLEAYIGQWLELVDEHPDVVAFLSDSARVLWPKAGPAVRRRTMIGLARSLMTRAPRRRRGTSPVSADVAAASLQGTLAELARMLQLGVVAGPAVRWKGELVRLFQRVVA
Ga0105248_123294912	3300009177	Switchgrass Rhizosphere	FETCHRRLWAKCNAAILAAESFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQARRGKSTVSVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG*
Ga0105249_105732481	3300009553	Switchgrass Rhizosphere	VPEVVSARESGHDVRGGCDAAGERRQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPRTPRATSAVHPDVVAASLQGTLAELGRMLQVGVVAGPAMRWKAELVALFRRIGA*
Ga0126370_112131652	3300010358	Tropical Forest Soil	LVDEHPEAMAFLSENARVLWPKSSAAVRRHTMIGLARSLMDAAPRSHRRRVQADVAAASLQGTLAELMRMLEVGVIAGPAIRWKFELVALFSKTAA*
Ga0126376_125402732	3300010359	Tropical Forest Soil	WAACNAAIASAKGFDDKLGGYIGQWLALVDEHPEVMAFLSDSARVLWPKASPAVRRQTMIGLARSLMIKAPQLRRETPAVNPDVAAASLQGTLGELTRMLQVGVVRGPAVRWKGEVVTLLLRLVG*
Ga0134066_101480061	3300010364	Grasslands Soil	DFDGKLENYIGEVLSLVDEHPEPMAFLSENARVLWPKAGPTVQRHTMIALARSLMNAAPRARKAAMVHPDIAAASLQGTLAELARMIQVGAVPGPALRWKPELVKFFRKSAV*
Ga0126379_117552931	3300010366	Tropical Forest Soil	EDFGGKLGNYIGEVLSLVDEHPEAMAFLSENARVLWPKAGPAVRRHTMIALARSLVDSAPRAAKGRAVHPDVAAASLQGTLAELARMIQVGAVRGPALTWKPELIALFRNTLAT*
Ga0134126_114279351	3300010396	Terrestrial Soil	KLENYIGEVLALVDEHPEAMAFLSENARVLWPKSGAAVRRHTIIALARSLMSAAPHAGKRSAIHPDIAAASLQGTLAELTRMIQVGAVRGPAVSWQSELVKLFRNIATT*
Ga0126383_125318982	3300010398	Tropical Forest Soil	TSFEAKLEGYIGQVLELVDQHPDAMAFLSDSARVLWPQAGPAVRRHTMIGLARSLMTATPRARSGRSAINPDVAAASLQGTLAELARMIQVGAVPGPAVRWQAELVALFRKIAAA*
Ga0134121_114167342	3300010401	Terrestrial Soil	LALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGMARSLMSLAPRPPGAGPAVHPDVAAASLQGTLAELARMLQVGVVPGPATRWKADLVALFRRVGA*
Ga0137463_12360411	3300011444	Soil	FDDKLAAYIGQVLALVDEHPDVMAFLSDSARVLWPKASPAVRRQTMIGLARSLMSLAPRPRRAKSAVHPDVAAASLQGTLAELARMLQVGVVAGPAMRWKADLVVLFRKLVA*
Ga0137463_12363631	3300011444	Soil	RRMWARCNAAITSAKGFDEKLEGYIGGWLELVDEHPEVVAFLSDSARVLWPKAGPTVRRQSMIGLARSLVLEAPRRRRGASAVNPDVAAASLQGTLGELARMLQVGVVDGPAARWKGDLVRLFRRLVG*
Ga0137378_105958362	3300012210	Vadose Zone Soil	WAACNAAVASAKGFDNKLEGYIGQWLALVDEHPEVMAFLSDSARVLWPKASPAVRRQTMIGLARSLLIKAPQRGRGTSAVNPDVAAASLQGTLGELTRMLQVGVVPGPAVRWKGEVVTLLLRLVG*
Ga0150984_1108626692	3300012469	Avena Fatua Rhizosphere	FETSHRRLWSRCHAAIERATDFDGKLENYIGEVLSLVDEHPEPMAFLSENARVLWPKAGPTVQRHTMIALARSLMTAAPRARKDTMVHPDIAAASLQGTLAELARMIQVGAAPGPALRWKPELVKFFRKSAA*
Ga0157354_10507261	3300012517	Unplanted Soil	SKDELALYLFENCHRRVWTKCNAAILAAGSFEDKLEAYIGQMLELVDEHPEAMAFLSDSARALWPRSGPMVRRQTLIGLARSLMSQAPQVRRGKSTIGVDVVAASLQGTLAEIARMLGGERISASAVTHARELLGSAARAR*
Ga0137394_110486722	3300012922	Vadose Zone Soil	SGKTFDQKLQGYIGRWLELADEHPQVIAFLSDSARVLWPKASAAVRRQTMIGLARSLMLGAPRLRRGGSAVSPDVAAASLQGTLAELTRMLQVGVVDGPAVRWKGRLVTLFRRLAA*
Ga0126375_107310131	3300012948	Tropical Forest Soil	LHPHNTKATSFDAKLDAYVGQVLELVDEYPEAMGFLSDSARVLWPKAGPAVRQHTMIGLARSLMTLAPRRRHSRSAVNPDIAAASLQGTLAELARMIQVGAAAGPTIRWKPDLVALFRRVASD*
Ga0134077_101599912	3300012972	Grasslands Soil	EAYVAQWLELVDEYPEVMGFLSDSARVLWPKARGSVRRQTMIGLARSLVLDAPRWRRASRSNVDVAAAAVQGTLAEVARMIQVGVVEGPAIRWKQALVALLKRLSA*
Ga0164308_118154631	3300012985	Soil	RCHAAITAGASFDDKLNGFIAQVLELVDKHPEAMAFLSENARVLWPKSGAAVRRHTMIGLARSLMGAAPRSSRGGQQIQADVAAASLQGTLAELTRMLQVGVISGPAIQWKPELVALFRKIVA*
Ga0164304_117802902	3300012986	Soil	AQVLELVDKHPEAMAFLSENARVLWPKSGAAVRRHTMIGLARSLMGAAPRSSRGGQQIQADVAAASLQGTLAELTRMLQVGVISGPAIQWKPELVALFRKIVA*
Ga0157378_129132682	3300013297	Miscanthus Rhizosphere	FDDKLDGYIGQVLELVDEHPEAMAFLSDSARVLWPRSGPAVRRQTMIGLARSLMSQAPQPRGKSAVSPDIVAASLQGTLAEFARMLQVGVIPGPAVRWKADLVRLFRRVAA*
Ga0157375_102030111	3300013308	Miscanthus Rhizosphere	LELVDEHPEAMAFLSDSARVLWPRSGPAVRRHTMIGLARSLMSEAPQPRGKSAVSPDIVAASLQGTLAEFARMLHVGVIPGPAVRWKADLVRLFRRVAA*
Ga0157375_113615541	3300013308	Miscanthus Rhizosphere	RLWAKCNAAILAAESFDDKLDTYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQVRRGKSTISVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVKLFRRVGS*
Ga0075322_11642992	3300014311	Natural And Restored Wetlands	ALYLFETSHRRLWSRCHAAIESAADFDGKLENYIGEVLLLVDEQPEAMAFLSENARVLWPKAGPAVRRQTMIGLARSLMSAAPRTAKGAAVHPDIAAASLQGTLAELARMIQVGAVRGPARSWKAELVKFFRKTAA*
Ga0157377_105863542	3300014745	Miscanthus Rhizosphere	KSFDDQLDGYIGQYLELVDEHPEAMAFLSDSARVLWPKADSTVRRQTMIGLARSLMMKAPQMRRGKSALHPDVAAASLQGTLAELTRMLQVGVISGPAVRWKSELVRCFGRLAG*
Ga0157377_106352572	3300014745	Miscanthus Rhizosphere	ALELVDEDPEAMAFLSDSARVLWPRSGPAVRRQTMIGLARSLMSQAPQVRRGKSTISVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG*
Ga0173478_108270351	3300015201	Soil	WARCNAAIVSSKSFDNQLDGYIGQFLELVDEHPEAMAFLSDSARVLWPKANSTVRRQTMIGLARSLMLKAPHMRRGKPAVHPDVAAASLQGTLAELTRMLQVGVISGPAVRWKSELVRCFGRLAG*
Ga0132257_1041520031	3300015373	Arabidopsis Rhizosphere	VLSLVDEHPEAMAFLSENARVLWPKAGPAVRRQTMIALARSLMNAAPHPRKGSRVHPDIAAASLQGTLAELARMIQVGAVGGPAISWKSELVNFFRKSAT*
Ga0182034_115854532	3300016371	Soil	FEACHHRVWTACHAAIEAKTGFDAKLDAYIDRVLDLVDEDPQAMAFLSDSARVLWPLAGPVVRRHTMIGLARTLMSGMPRSRRRASGAALDIAAASLQGTLAELARMIHVGAAPGPAARWKPELVALFRRIAAP
Ga0187775_102071621	3300017939	Tropical Peatland	LAQHLFDVCHRRVWGRLNTAVVSAKSFDDKLDGYIGRWLELVDEHPDVMAFLSDSARVLWPKASPAVKRQTVIGLARSLALAAPRRRNGAHAIDPDLAAASLQGTLAELARMLQVGVVEGPAARWKARVVALIRMLFA
Ga0187776_110350411	3300017966	Tropical Peatland	WGRLNAAIVSAKSFDDKLDGYIGRWLELVDEHPDVMAFLSDSARVLWPKASPAVKRQTVIGLARSLALAAPRRRNGAHAIDPDLAAASLQGTLAELARMLQVGVVEGPAARWKARVVALIRMLFA
Ga0187774_104241842	3300018089	Tropical Peatland	VVSAKSFNDKLDGYIGGWLELVDEHPDVMAFLSDSARVLWPKASPAVKRQTVIGLARSLALAAPRRSNGARAIDPDLAAASLQGTLAELARMLQVGVVEGPAARWKVRVIALIRMLFA
Ga0173481_108602021	3300019356	Soil	IEAAKSFDDKLEAHIGQVLELVDEHPDAMAFLSESARVLWPKAGPSVRRHTMIGLARELMSHAPRPRRGQAALNLDLAAASLQGTLAELARMLEVGVVPGPAVRWKADLVALFSRVSA
Ga0173482_100591451	3300019361	Soil	NAAILAADSFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPRSGPAVRRETMIGLARSLMSQAPQVRRGKSTISVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVKLFRRVG
Ga0247746_10791551	3300022886	Soil	HFASKDELALYLFETCHRRLWAKCNAAILAAGSFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQARRGRSTVSVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG
Ga0247795_10524642	3300022899	Soil	KHFASKDELALYLFETCHRRLWAKCNAAILAAGSFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQARRGKSTVSVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG
Ga0247793_10844381	3300023066	Soil	LWAKCHAAIDAAKSFDDKLEAHIGQVLELVDEHPDAMAFLSESARVLWPKAGPSVRRHTMIGLARELMSHAPRPRRGQAALNLDLAAASLQGTLAELARMLEVGVVAGPAVRWKADLVALFSRVSA
Ga0247794_100040514	3300024055	Soil	ETCHRRLWAKCNAAILAADSFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPRSGPAVRRETMIGLARSLMSQAPQVRRGKSTISVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG
Ga0207645_111186251	3300025907	Miscanthus Rhizosphere	SHRRLWSRCHAAIESATDFEGRLDNYIGEVLSLVDEHPEAMAFLSENARVLWPKAGPAVRRQTMIALARSLMSAAPRTGKGSAVHPDIAAASLQGTLAELARMIQVGAVRGPARSWKAELVKLFRKTAAA
Ga0207660_115526821	3300025917	Corn Rhizosphere	AKSFDAKLEGYISQVLELVDEDPEAMAFLSDSARVLRPLAGPAVRRQTMIDLARSLMSAAPRGRGRRSSVDVAAASLQGTLAELARMIQIGDVPGPAVRWKAELVGLFRKIATA
Ga0207649_114102592	3300025920	Corn Rhizosphere	TGFDDKLEAYIGQVLELVDEHPETMAFLSDSARVLWPKAAPAIRRQTMIGLARSLMSLASRPRRGRPAVNPDVAAASLQGTLAEMARMVQVGVIPGPATRWKADLVALFRSVAS
Ga0207644_107519022	3300025931	Switchgrass Rhizosphere	KCNAAILAAESFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQVRRGKSTISVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVKLFRRVGS
Ga0207690_106392601	3300025932	Corn Rhizosphere	YISQVLELVDEDPEAMAFLSDSARVLRPLAGPAVRRQTMIDLARSLMSAAPRGRGRRSSVDVAAASLQGTLAELARMIQIGDVPGPAVRWKAELVGLFRKIATA
Ga0207686_106771371	3300025934	Miscanthus Rhizosphere	IGQVLALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGMARSLMSLAPRAPGAGPAVHPDVVAASLQGTLAELGRMLQVGVVAGPAMRWKADLVALFRRVGA
Ga0207670_115641801	3300025936	Switchgrass Rhizosphere	LFETCHRRMWTRCNAAVVSAEGFGDKLEGYIGQWLELVDEHPEVVAFLSDSARVLWPKAGAVVRQQTMIGLARSLMIKAPTRRGVPAVNADVAAASLQGTLAELTRMLQVGVLAGPAVRWKDELVTLFRKLVV
Ga0207669_112629001	3300025937	Miscanthus Rhizosphere	EGYVGRWLELVDEHPEVVAFLSDSARVLWPKAGPIVRRHTMIGLARSLVLEAPRFRRGARPVNPDLAAASLQGTLAELTRMLQVGVVDGPAVRWKGELVTLFRRLV
Ga0207704_102831241	3300025938	Miscanthus Rhizosphere	EGYIGQFLELMDEDPEALAFLSDSARVLWPKAGKAVRQQTMIGLARSLMTMAPQRRGRKAAVNPDVAAASLQGTLAELARMLQVGVIAGPAVRWKAELVTLFRKIVA
Ga0207704_103366461	3300025938	Miscanthus Rhizosphere	RLWAKCNAAILAAGSFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQARRGKSTVSVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG
Ga0207704_113625901	3300025938	Miscanthus Rhizosphere	SKEELALQLFDICHRRLWARCNAAIASANNFDDKLDGYVGQFLELMDEDPEALAFLSDSARVLWPKAGKAVRQQTMIGLARSLMTTAPRRRGKSAVNPDVAAASLQGTLAELARMLQVGVIAGPAIRWKGDLVTCFRKLVA
Ga0207711_100657541	3300025941	Switchgrass Rhizosphere	RRLWTKCNAAILAAKGFDDKLDGYIGQVLELVDEHPEAMAFLSDSARVLWPRSGPAVRRHTMIGLARSLMSEAPQPRAKSAVSPDLVAASLQGTLAEFARMLHVGVIPGPAVRWKADLVRLFRRVAA
Ga0207711_112478711	3300025941	Switchgrass Rhizosphere	WAKCNAAILAAGSFDDKLDAYIGQALELVDEDPEAMAFLSDSARVLWPKSGPAVRRQTMIGLARSLMSQAPQARRGKSTVSVDVVAASLQGTLAEIARMLQVGVIPGPALRWKADLVNLFRRVGG
Ga0207711_116314851	3300025941	Switchgrass Rhizosphere	HGAIEAATGFDDKLEAYIGQVLELVDEHPETMAFLSDSARVLWPKAAPAVRRQTMIGLARSLMSLASRPRRGRPAVNPDVAAASLQGTLAEMARMVQVGVIPGPATRWKADLVALFRSVA
Ga0207651_108622491	3300025960	Switchgrass Rhizosphere	QVLALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGMARSLMSLAPRAPGAGPAVHPDVVAASLQGTLAELGRMLQVGVVAGPAMRWKADLVALFRRVGA
Ga0207703_115834561	3300026035	Switchgrass Rhizosphere	DAAKSFDDKLEAYIGQVLALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGLARSLMSLAPRPPRSRSAVHPDVVAASLQGTLAELARMLQVGVIAGPAIRWKADLVSLFRKVGA
Ga0207641_123060881	3300026088	Switchgrass Rhizosphere	YIGQVLELVDEHPETMAFLSDSARVLWPKAAPAIRRQTMIGLARSLMSLASRPRRGRPAVNPDVAAASLQGTLAEMARMVQVGVIPGPATRWKADLVALFRSVAS
Ga0207676_113964082	3300026095	Switchgrass Rhizosphere	AIDAAKSFDDKLEAYIGQVLALVDEHPDAMAFLSDSARVLWPKAGPAVRQQTMIGLARSLMIKAQTRRGTSAVNPDVAAASLQGTLAELTRMLQVGVLAGPAVRWKDELVTLFRRLAV
Ga0310813_110262371	3300031716	Soil	FDAKLANYIGEVLSLVDEQPEAMMFLSENARVLWPKSGSAVRRHTMIALARSLMSTARRTGKGSAVHPDVAAASLQGTLAELARMIQVGAVRGPAGTWKAELVKLFRKTAAV
Ga0310813_116472521	3300031716	Soil	AIASGKSFDDKLEGYIGQFLELIDEHPEALAFISDSARVLWPKAAPAVRRQTMIGLARSLMSLASRPRRGRPAVNPDVAAASLQGTLAEMARMVQVGVIPGPATRWKADLVALFRSVAS
Ga0306918_106598562	3300031744	Soil	KEEMALYLFEACHRRLWTKCHTAIEEATSFEAKLEGYIGQVLELVDQHPDAMAFLSDSARVLWPQAGPAVRRQTMIGLARSLMTAAPRPRSGRSGINPDVAAASLQGTLAELARMIQVGAVPGPAVRWRPELVALFRKIAAA
Ga0318554_103302881	3300031765	Soil	EEATSFEAKLEGYIGQVLELVDQHPDAMAFLSDSARVLWPQAGPAVRRQTMIGLARSLMTAAPRPRSGRSGINPDVAAASLQGTLAELARMIQVGAVPGPAVRWRPELVALFRKIAAA
Ga0307407_110793371	3300031903	Rhizosphere	DFDAKLSAYVGEWLDLVDEHPTVMAFLSDSARALWPKASPPVTRQTMVGLARSLVREARKHRRGTSVINADIAAASLQGTLGEVARMVQVGVLAAPAGRWKSDLVALFQRILA
Ga0308175_1004056692	3300031938	Soil	ETSHRRLWSRCQAAIERGGDFHAKLENYIGEVLTLVDEHPEAMAFLSENARVLWPKSGAAVRRQTIIGQARSLMNAAPHAGKRSAIHPDIAAASLQGTLAELTRMIQVGAVRGPATHWKPELVKLFRNISTD
Ga0310910_106434062	3300031946	Soil	EMALYLFEACHRRLWTKCHTAIEEATSFEAKLEGYIGQVLELVDQHPDAMAFLSDSARVLWPQAGPAVRRQTMIGLARSLMTAAPRPRSGRSGINPDVAAASLQGTLAELARMIQVGAVPGPAVRWRPELVALFRKIAAA
Ga0306926_119078891	3300031954	Soil	HAAIVNAKSFDVKLDRYIAQVLELVDEEPHAMAFLSDSARILWPLAGPVVRRQTMIELARSLMSAAPRRRGDKSAVNADLAAASLQGTLAELARMIQVGAVPGPAMRWKADLIVLFRRIAAV
Ga0306922_115382412	3300032001	Soil	SFDVKLDRYIAQVLELVDEEPHAMAFLSDSARILWPLAGPVVRRQTMIELARSLMSAAPRRRGDKSAVNADLAAASLQGTLAELARMIQVGAVPGPAMRWKADLIVLFRRIAAV
Ga0308173_117533892	3300032074	Soil	KTFDAKLDGYIGRVLELVDEDPEAIAFLSDSGRVLWPKSGATVRRQTMIGLARSVMNEAPRPRGTKPSAVSINADVAAASLQGTLAELARMIQVGAVPGPAMRWKPELVALFRRVSGA
Ga0310889_101763571	3300032179	Soil	QFLQLVDEHPEAMAFLSDSARVLWPKAGSTVRRQTMIGLARSLMMKAPQMRRGKSALHPDVAAASLQGTLAELTRMLQVGVVSGPAVRWKGELVRCFGRLAG
Ga0326726_100562091	3300033433	Peat Soil	WLELVDEDPEVVAFLSDSARVLWPKASPTVRRRTMIGLARSLALEAPRSSRGRAAAVHPDLAAASLQGSLNELARMLQVGVLDGPAARWKEGLVALFERLVT
Ga0364945_0190806_270_623	3300034115	Sediment	DAAKTFDDKLEAYIGQVLALVDEHPDAMAFLSDSARVLWPKAAPAVRRQTMIGMARSLMSLAPRPPGATSALNPDVVAASLQGTLAELARMLQVGVVAGPATRLKADLVALFRRVGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073769

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences