Metagenome / Metatranscriptome Family F073738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073738
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	64 residues
Representative Sequence	MKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Number of Associated Samples	96
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	34.17 %
% of genes from short scaffolds (< 2000 bps)	80.83 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.167 % of family members)
Environment Ontology (ENVO)	Unclassified (40.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 39.13% β-sheet: 0.00% Coil/Unstructured: 60.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00155	Aminotran_1_2	20.83
PF00126	HTH_1	12.50
PF03466	LysR_substrate	11.67
PF00392	GntR	5.00
PF00487	FA_desaturase	0.83
PF12833	HTH_18	0.83
PF01258	zf-dskA_traR	0.83
PF04773	FecR	0.83
PF08281	Sigma70_r4_2	0.83
PF01323	DSBA	0.83
PF02678	Pirin	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.83
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.83
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.83
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.17 %
Unclassified	root	N/A	15.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.17 %
Unclassified	root	N/A	15.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.17 %
Unclassified	root	N/A	15.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.67 %
Unclassified	root	N/A	15.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.50 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	27.50 %
Unclassified	root	N/A	15.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.50 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.83 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	12.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1.67 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.83 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	12.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	1.67 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.83 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	12.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	1.67 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.83 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.83 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	12.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1.67 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.83 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9002064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2616	Open in IMG/M
2088090015\|GPICI_9003149	All Organisms → cellular organisms → Bacteria → Proteobacteria	3213	Open in IMG/M
2088090015\|GPICI_9231033	Not Available	1202	Open in IMG/M
2228664021\|ICCgaii200_c0529423	Not Available	584	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104814523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	644	Open in IMG/M
3300000890\|JGI11643J12802_10919649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300003319\|soilL2_10007716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1695	Open in IMG/M
3300003321\|soilH1_10058534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1670	Open in IMG/M
3300003322\|rootL2_10288590	All Organisms → cellular organisms → Bacteria → Proteobacteria	1211	Open in IMG/M
3300004479\|Ga0062595_100173309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300005332\|Ga0066388_100896504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1466	Open in IMG/M
3300005332\|Ga0066388_101178926	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300005332\|Ga0066388_102547308	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005332\|Ga0066388_107439495	Not Available	550	Open in IMG/M
3300005334\|Ga0068869_101223807	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005336\|Ga0070680_101018786	Not Available	715	Open in IMG/M
3300005339\|Ga0070660_100784797	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300005343\|Ga0070687_100017283	All Organisms → cellular organisms → Bacteria → Proteobacteria	3312	Open in IMG/M
3300005353\|Ga0070669_100099145	All Organisms → cellular organisms → Bacteria → Proteobacteria	2195	Open in IMG/M
3300005355\|Ga0070671_100032479	All Organisms → cellular organisms → Bacteria	4315	Open in IMG/M
3300005356\|Ga0070674_100362625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300005545\|Ga0070695_100834379	Not Available	741	Open in IMG/M
3300005577\|Ga0068857_101847066	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300005719\|Ga0068861_100130719	All Organisms → cellular organisms → Bacteria → Proteobacteria	2038	Open in IMG/M
3300005840\|Ga0068870_10040829	All Organisms → cellular organisms → Bacteria → Proteobacteria	2408	Open in IMG/M
3300005844\|Ga0068862_100203830	All Organisms → cellular organisms → Bacteria → Proteobacteria	1785	Open in IMG/M
3300006049\|Ga0075417_10005446	All Organisms → cellular organisms → Bacteria → Proteobacteria	4339	Open in IMG/M
3300006049\|Ga0075417_10322268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	753	Open in IMG/M
3300006196\|Ga0075422_10085115	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300006358\|Ga0068871_100033986	All Organisms → cellular organisms → Bacteria → Proteobacteria	4042	Open in IMG/M
3300006844\|Ga0075428_101294728	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300006847\|Ga0075431_101087105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	765	Open in IMG/M
3300006847\|Ga0075431_101937243	Not Available	545	Open in IMG/M
3300006854\|Ga0075425_101495797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	763	Open in IMG/M
3300006876\|Ga0079217_10804449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	653	Open in IMG/M
3300006876\|Ga0079217_11409256	Not Available	545	Open in IMG/M
3300006880\|Ga0075429_100023811	All Organisms → cellular organisms → Bacteria → Proteobacteria	5313	Open in IMG/M
3300006894\|Ga0079215_10211263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	992	Open in IMG/M
3300006894\|Ga0079215_11203357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	577	Open in IMG/M
3300006904\|Ga0075424_100316886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300007004\|Ga0079218_10659663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	971	Open in IMG/M
3300007004\|Ga0079218_10850721	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300009094\|Ga0111539_10093472	All Organisms → cellular organisms → Bacteria → Proteobacteria	3533	Open in IMG/M
3300009098\|Ga0105245_10670551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1068	Open in IMG/M
3300009100\|Ga0075418_12548151	Not Available	558	Open in IMG/M
3300009156\|Ga0111538_12421979	Not Available	659	Open in IMG/M
3300010166\|Ga0126306_11453248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	568	Open in IMG/M
3300010371\|Ga0134125_11621175	Not Available	704	Open in IMG/M
3300010371\|Ga0134125_11998061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	630	Open in IMG/M
3300010397\|Ga0134124_10003519	All Organisms → cellular organisms → Bacteria → Proteobacteria	12606	Open in IMG/M
3300011333\|Ga0127502_10741535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	678	Open in IMG/M
3300012469\|Ga0150984_117015246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	645	Open in IMG/M
3300012891\|Ga0157305_10129076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	657	Open in IMG/M
3300012901\|Ga0157288_10016051	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300012902\|Ga0157291_10133213	Not Available	719	Open in IMG/M
3300013308\|Ga0157375_10022302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5826	Open in IMG/M
3300014326\|Ga0157380_10731761	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300015200\|Ga0173480_10726970	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300015373\|Ga0132257_100532929	All Organisms → cellular organisms → Bacteria → Proteobacteria	1444	Open in IMG/M
3300018422\|Ga0190265_10435741	All Organisms → cellular organisms → Bacteria → Proteobacteria	1415	Open in IMG/M
3300018429\|Ga0190272_11338454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	715	Open in IMG/M
3300018466\|Ga0190268_10228322	All Organisms → cellular organisms → Bacteria → Proteobacteria	1047	Open in IMG/M
3300018476\|Ga0190274_10539089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1178	Open in IMG/M
3300018476\|Ga0190274_11134409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	863	Open in IMG/M
3300019254\|Ga0184641_1085832	Not Available	891	Open in IMG/M
3300019259\|Ga0184646_1061773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	587	Open in IMG/M
3300019259\|Ga0184646_1180428	Not Available	525	Open in IMG/M
3300019279\|Ga0184642_1335473	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300019356\|Ga0173481_10570673	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	590	Open in IMG/M
3300019361\|Ga0173482_10582788	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300019377\|Ga0190264_10418089	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300023263\|Ga0247800_1115251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	556	Open in IMG/M
3300025893\|Ga0207682_10530322	Not Available	557	Open in IMG/M
3300025917\|Ga0207660_10590488	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300025918\|Ga0207662_10011952	All Organisms → cellular organisms → Bacteria → Proteobacteria	4829	Open in IMG/M
3300025923\|Ga0207681_10102088	All Organisms → cellular organisms → Bacteria → Proteobacteria	2070	Open in IMG/M
3300025937\|Ga0207669_10083220	All Organisms → cellular organisms → Bacteria → Proteobacteria	2057	Open in IMG/M
3300025942\|Ga0207689_11310141	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300025981\|Ga0207640_11512657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	603	Open in IMG/M
3300026023\|Ga0207677_10030698	All Organisms → cellular organisms → Bacteria → Proteobacteria	3434	Open in IMG/M
3300026067\|Ga0207678_10548120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300026078\|Ga0207702_10730718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	977	Open in IMG/M
3300026142\|Ga0207698_10384914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1336	Open in IMG/M
3300027873\|Ga0209814_10094331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1267	Open in IMG/M
3300027873\|Ga0209814_10260124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	753	Open in IMG/M
3300027880\|Ga0209481_10760216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	504	Open in IMG/M
3300027886\|Ga0209486_10554582	Not Available	722	Open in IMG/M
3300027907\|Ga0207428_10006988	All Organisms → cellular organisms → Bacteria → Proteobacteria	10337	Open in IMG/M
3300027909\|Ga0209382_10006306	All Organisms → cellular organisms → Bacteria → Proteobacteria	15292	Open in IMG/M
3300028379\|Ga0268266_11677202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	611	Open in IMG/M
3300028380\|Ga0268265_10031910	All Organisms → cellular organisms → Bacteria → Proteobacteria	3809	Open in IMG/M
3300028381\|Ga0268264_10058897	All Organisms → cellular organisms → Bacteria	3217	Open in IMG/M
3300028381\|Ga0268264_11244458	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031228\|Ga0299914_10800643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	786	Open in IMG/M
3300031547\|Ga0310887_10067400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1670	Open in IMG/M
3300031548\|Ga0307408_100011214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5919	Open in IMG/M
3300031548\|Ga0307408_100211833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1575	Open in IMG/M
3300031548\|Ga0307408_100292398	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300031548\|Ga0307408_100354361	All Organisms → cellular organisms → Bacteria → Proteobacteria	1246	Open in IMG/M
3300031562\|Ga0310886_10666849	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300031731\|Ga0307405_12058393	Not Available	512	Open in IMG/M
3300031847\|Ga0310907_10566663	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300031852\|Ga0307410_10310943	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300031854\|Ga0310904_10527855	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300031854\|Ga0310904_11020184	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300031854\|Ga0310904_11033274	Not Available	586	Open in IMG/M
3300031901\|Ga0307406_10553805	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300031901\|Ga0307406_10940750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	738	Open in IMG/M
3300031903\|Ga0307407_10994508	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031903\|Ga0307407_11204490	Not Available	592	Open in IMG/M
3300031911\|Ga0307412_11477859	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	617	Open in IMG/M
3300032002\|Ga0307416_101492996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	782	Open in IMG/M
3300032002\|Ga0307416_103589878	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300032005\|Ga0307411_10478397	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300032005\|Ga0307411_11751039	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300034666\|Ga0314788_015235	All Organisms → cellular organisms → Bacteria → Proteobacteria	1216	Open in IMG/M
3300034667\|Ga0314792_047926	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300034670\|Ga0314795_079659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	628	Open in IMG/M
3300034817\|Ga0373948_0102069	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.67%
Environmental	Environmental	48.33%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.67%
Terrestrial	Environmental → Terrestrial	44.17%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.67%
Freshwater	Environmental → Aquatic → Freshwater	4.17%
Roots	Host-Associated → Plants → Roots	0.83%
Rhizome	Host-Associated → Plants → Rhizome	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.17%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.50%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034670	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00141890	2088090015	Soil	MKTFIAVFASFLVNGGLLGGLAYSVQQLQAPPLGEVLIVQLPDDASLPTLADAHQVGPSAARAL
GPICI_03334830	2088090015	Soil	MKTFIAVVASLLVNGGVLGGLAYSVEQLQAPPFGEVLIVQLPDGATLPTLADAHQVGPSAARAL
GPICI_03173070	2088090015	Soil	MKTFIAVVASLVVNGGVLGGLAYSVDQLQAPPFGEVLIVQLPDGATLPTLADAQQVGPSAARAL
ICCgaii200_05294232	2228664021	Soil	AVMKTFIAVVASVLVNAGALGGLAYSTHEAQVPPLGEVLVVQLPDESALPAIADVRNVGPSAARAL
INPhiseqgaiiFebDRAFT_1048145232	3300000364	Soil	MKTFIGIVASLLVNAGVIGGLAWSAXXQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
JGI11643J12802_109196493	3300000890	Soil	MKTFIAVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL*
soilL2_100077163	3300003319	Sugarcane Root And Bulk Soil	MKTFIGIVASLLVNLGVIGGLAWSAYQQQLPPLGEVLVVQLPDDSSVPAVADARSVGPSAARAL*
soilH1_100585342	3300003321	Sugarcane Root And Bulk Soil	MKTFIAVVASLVVNGGVLGGLAYSVDELQTPPFGEVLIVQLPDGVTLPTLADAHQVGPSAARAL*
rootL2_102885903	3300003322	Sugarcane Root And Bulk Soil	MKTFIAVVASLVVNGGFLGGLAYSVDELQTPPFGEVLIVQLPDGVTLPTLADAHQVGPSAARAL*
Ga0062595_1001733092	3300004479	Soil	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL*
Ga0066388_1008965043	3300005332	Tropical Forest Soil	MKTIFGVVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSVPQIAAVRSVGPSAARAL*
Ga0066388_1011789262	3300005332	Tropical Forest Soil	MKTFIAVVASLVVNGGLLGGLAYSVQQLQAPPLGEVLVVQLPDGAALQLADAHQVGPSAARAL*
Ga0066388_1025473082	3300005332	Tropical Forest Soil	MKTFIGIVASIVVNIGVIGGLAWSAYQQQLPPLGEVLIVQLPDDASLPQVADTRSVGPSAARAL*
Ga0066388_1074394951	3300005332	Tropical Forest Soil	MKTFIGVVASLLVNGGVLGGLVYSVDQLQTPPFGEVLIVQLPDGASLPTLAAAHQVGPSAARAL*
Ga0068869_1012238072	3300005334	Miscanthus Rhizosphere	FFLEQAVMKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL*
Ga0070680_1010187861	3300005336	Corn Rhizosphere	MKTFIAVFASFLVNGGLLGGLAYSVQQLQAPPLGEVLIVQLPDDASLPTLADAHQVGPSAARAL*
Ga0070660_1007847972	3300005339	Corn Rhizosphere	MKTFIGIVASLLVNAGLIGGLAWSAYQQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL*
Ga0070687_1000172835	3300005343	Switchgrass Rhizosphere	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
Ga0070669_1000991455	3300005353	Switchgrass Rhizosphere	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL*
Ga0070671_1000324794	3300005355	Switchgrass Rhizosphere	MKTFIGIVASLLVNAGLIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL*
Ga0070674_1003626252	3300005356	Miscanthus Rhizosphere	MKTFFGIVASLLVNAGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
Ga0070695_1008343791	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	FFLEQAVMKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL*
Ga0068857_1018470661	3300005577	Corn Rhizosphere	VVASLLVNGGALGGLTYSVQSLQAPPLGEVLIVQLPEGATLPTLANAQQVGPSAARAL*
Ga0068861_1001307192	3300005719	Switchgrass Rhizosphere	MKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL*
Ga0068870_100408294	3300005840	Miscanthus Rhizosphere	MKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL*
Ga0068862_1002038302	3300005844	Switchgrass Rhizosphere	MKTFIAVVASLLVNGGVLGGLVYSVNQLQTPPLGEVLIVQLPDGVTLPTLADAHQVGPSAARAL*
Ga0075417_100054463	3300006049	Populus Rhizosphere	MKTFIGVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL*
Ga0075417_103222681	3300006049	Populus Rhizosphere	MKTFIAVAASLLVNGGLLGGLAYSVQELQAPPLGEVLVVQLPDGASLPTLADASQVGPSAARAL*
Ga0075422_100851151	3300006196	Populus Rhizosphere	MKTFIAVVASLVVNGGVLGGLAYSVDQLQAPPFGEVLIVQLPDGATLPTLADAHQVGPSAARAL*
Ga0068871_1000339861	3300006358	Miscanthus Rhizosphere	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVR
Ga0075428_1012947282	3300006844	Populus Rhizosphere	MKTFLGVLASLLVNLGVIGGLAWSAYEQQLPPLGEVLIVQLPDDASVPAIADARSVGPSAARAL*
Ga0075431_1010871052	3300006847	Populus Rhizosphere	MKTFLGIVASLLVNVGVIGGLAWSAYEQQLPPLGEVLIVQLPDDASVPAIADARSVGPSAARAL*
Ga0075431_1019372432	3300006847	Populus Rhizosphere	MKTFIAVVASLLVNGGVLGGLAYSVEQLQAPPFGEVLIVQLPDGATLPTLADAHQVGPSAARAL*
Ga0075425_1014957972	3300006854	Populus Rhizosphere	MKTFIGIVASLLVNAGLIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
Ga0079217_108044492	3300006876	Agricultural Soil	MKTFIAVVASVLVNAGALAGLAWSVHEAQAPPLGEVLIVQLPDESAVPVIADARPVGPSAARAL*
Ga0079217_114092562	3300006876	Agricultural Soil	MKTFIAVVASVLVNAGALGGLAWSVHDAQVPPLGEVLIVQLPDDSAVPVIADARPVGPSAARAL*
Ga0075429_1000238111	3300006880	Populus Rhizosphere	VMKTFIGIVASLLVNAGLIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
Ga0079215_102112631	3300006894	Agricultural Soil	MKTFIAVVASLVINGGLIGGLAWSAHEAQLPPLGEVLVVQLPDEAFPAIADARQVGPSAARAL*
Ga0079215_112033571	3300006894	Agricultural Soil	MKTFIAVVASVLVNAGALGGLAWSVHEAQVPPLGEVLIVQLPDESALPAIADARP
Ga0075424_1003168863	3300006904	Populus Rhizosphere	MKTFFGIVASLLVNLGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
Ga0079218_106596633	3300007004	Agricultural Soil	MKTFIAVVASVLVNAGALGGLAWSVHEAQVPPLGEVLIVQLPDESAVSAMADARPVGPSAARAL*
Ga0079218_108507212	3300007004	Agricultural Soil	VVRQRVEQAVMKTFIAVVASLVINGGLIGGLAWSAHEAQLPPLGEVLVVQLPDEAFPAIADARQVGPSAARAL*
Ga0111539_100934721	3300009094	Populus Rhizosphere	APAVVHHSFFLEQAVMKTFIGVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL*
Ga0105245_106705511	3300009098	Miscanthus Rhizosphere	MKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVR
Ga0075418_125481512	3300009100	Populus Rhizosphere	MKTFLGVLASLLVNLGVIGGLAWSAYEQQLPPLGEVLIVQLPDDASVPAIADARSVGPS
Ga0111538_124219791	3300009156	Populus Rhizosphere	MKTFIGVVASLLVNGGVLGGRRYIVIKLQTPPFGEVLIVQLHDDATLPTLAAAHQVGPSAARAL*
Ga0126306_114532481	3300010166	Serpentine Soil	VVASVLVNAGALGGLAWSVHEAQVPPLGEVLIVQLPDESALPAIADSRPVGPSAARAL*
Ga0134125_116211752	3300010371	Terrestrial Soil	EQAVMKTFIGIVASLLVNAGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
Ga0134125_119980611	3300010371	Terrestrial Soil	MKTFIAVFASFLVNGGLLGGLAYSVQQLQAPPLGEVLIVQLPDDASLPTLADEHQVG
Ga0134124_1000351911	3300010397	Terrestrial Soil	MKTFIGIVASLLVNAGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL*
Ga0127502_107415352	3300011333	Soil	VKTFIAVVASVLVNAGALGGLAYSTHEAQVPPLGEVLIVQLPDESALPAIADVRNVGPSAARAL*
Ga0150984_1170152462	3300012469	Avena Fatua Rhizosphere	MKTLIGIVASLLVNAGVIGGLVWSAYEQQLPPLGEVLIVQLPDDASLPQVADTRSVGPSAARAL*
Ga0157305_101290761	3300012891	Soil	MKTFIAVVASLLVNGGVLGGLTYSVQSLQAPPLGEVLIVQLPDGATLPTLADAQQVGPSAARAL*
Ga0157288_100160512	3300012901	Soil	KTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL*
Ga0157291_101332131	3300012902	Soil	KTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL*
Ga0157310_100478752	3300012916	Soil	NAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL*
Ga0157375_100223027	3300013308	Miscanthus Rhizosphere	VVHHFFFLEQGVMKTFFGIVASLLVNVGVIGGLACSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL*
Ga0157380_107317612	3300014326	Switchgrass Rhizosphere	HHFYFLEQAVMKTFFGIVASLLVNLGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL*
Ga0173480_107269701	3300015200	Soil	SLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL*
Ga0132257_1005329292	3300015373	Arabidopsis Rhizosphere	RQRMEQTVMKTFIGVVASLLVNGGVLGGLAYSVVQLQTPPFGEVLIVQLPDGATLPTLAAAHQVGPSAARAL*
Ga0190265_104357412	3300018422	Soil	MKTFIAVVASVLVNAGALGGLAWSVHEAQVPPLGEVLIVQLPDESAVPVIADARPVGPSAARAL
Ga0190272_113384541	3300018429	Soil	MKTFIAVVASVLVNAAALGGLAWSVHDAQVPPLGEVLIVQLPDESAVPAIADARPVGPSAARAL
Ga0190268_102283222	3300018466	Soil	MKTFIAVVASVLVNAGALGGLAYSTHEAQVPPLGEVLIVQLPDESALPAIADARPVGPSAARAL
Ga0190274_105390893	3300018476	Soil	MKTFIAVVASLLVNGGVLGGLTYSVQALQAPPLGEVLIVQLPDGATLPTLANAQQVGPSAARAL
Ga0190274_111344092	3300018476	Soil	MKTFISVVASVLVNAGALGGLACSVHEAQVPPLGEVLIVQLPDESAVAAVAAARPVGPSAARAL
Ga0184641_10858322	3300019254	Groundwater Sediment	MKTFIAVFASVLVNGGLLGGLAYSVQQLQAPPLGEVLIVQLPDDASLPTLADARQVGPSAARAL
Ga0184646_10617732	3300019259	Groundwater Sediment	MKTFIAVVASLLVNAGVLGGLAWSAYETQLPPLGEVLIVQLPDDSAVPAIADARQVGPSAARAL
Ga0184646_11804282	3300019259	Groundwater Sediment	MKTFIAVVASLLVNGGLLGGLAYSVQQLQAPPLGEVLIVQLPDDASLPTLADTHQVGPSAARAL
Ga0184642_13354731	3300019279	Groundwater Sediment	FASLLVNGGLLGGLAYSVQQLQAPPLGEVLIVQLPDDASLPTLADARQVGPSAARAL
Ga0173481_105706732	3300019356	Soil	MKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0173482_105827882	3300019361	Soil	IVASLLVNASVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL
Ga0190264_104180892	3300019377	Soil	MKTFIAVVASVLVNAGALGGLAWSVHEAQVPPLGEVLIVQLPDESALPAIADARPVGPSAARAL
Ga0247800_11152512	3300023263	Soil	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL
Ga0207682_105303221	3300025893	Miscanthus Rhizosphere	MKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL
Ga0207660_105904882	3300025917	Corn Rhizosphere	SAVVCKRVEQAVMKTFIAVFASFLVNGGLLGGLAYSVQQLQAPPLGEVLIVQLPDDASLPTLADAHQVGPSAARAL
Ga0207662_100119523	3300025918	Switchgrass Rhizosphere	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL
Ga0207681_101020885	3300025923	Switchgrass Rhizosphere	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPS
Ga0207669_100832201	3300025937	Miscanthus Rhizosphere	MKTFFGIVASLLVNAGLIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0207689_113101412	3300025942	Miscanthus Rhizosphere	ASLLVNGGVLGGLVYSVNQLQTPPLGEVLIVQLPDGVTLPTLADAHQVGPSAARAL
Ga0207640_115126571	3300025981	Corn Rhizosphere	AVVHHSFFLEQAVMKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL
Ga0207677_100306986	3300026023	Miscanthus Rhizosphere	MKTFFGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL
Ga0207678_105481202	3300026067	Corn Rhizosphere	LVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL
Ga0207702_107307182	3300026078	Corn Rhizosphere	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0207698_103849141	3300026142	Corn Rhizosphere	MKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSV
Ga0209814_100943311	3300027873	Populus Rhizosphere	MKTFIGVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL
Ga0209814_102601243	3300027873	Populus Rhizosphere	MKTFIAVAASLLVNGGLLGGLAYSVQELQAPPLGEVLVVQLPDGASLPTLADASQVGPSAARAL
Ga0209481_107602162	3300027880	Populus Rhizosphere	FLEQAVMKTFIGIVASLLVNAGVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSFPQIADVRSVGPSAARAL
Ga0209486_105545822	3300027886	Agricultural Soil	KTFFAVVASVLVNAGALGGLAYSTHEAQVPPLGEVLIVQLPDESALPAIAEVRNVGPSAARAL
Ga0207428_100069889	3300027907	Populus Rhizosphere	MKTFIAVVASLVVNGGVLGGLAYSVDQLQAPPFGEVLIVQLPDGATLPTLADAHQVGPSAARAL
Ga0209382_100063068	3300027909	Populus Rhizosphere	MKTFLGVLASLLVNLGVIGGLAWSAYEQQLPPLGEVLIVQLPDDASVPAIADARSVGPSAARAL
Ga0268266_116772022	3300028379	Switchgrass Rhizosphere	MKTFIAVVASLLVNGGVLGGLVYSVNQLQTPPLGEVLIVQLPDGVTLPTLADAHQVGPSAARAL
Ga0268265_100319104	3300028380	Switchgrass Rhizosphere	SPVVHHFFFLEQAVMKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL
Ga0268264_100588974	3300028381	Switchgrass Rhizosphere	MKTFIGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL
Ga0268264_112444582	3300028381	Switchgrass Rhizosphere	MKTFFGIVASLLVNAGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0299914_108006433	3300031228	Soil	MKTFIAVVASVLVNAGALGGLAWSVHEAQVPPLGEVLIVQLPDDSAVPVIADARPVGPSAARAL
Ga0310887_100674002	3300031547	Soil	MKTFIAVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL
Ga0307408_1000112148	3300031548	Rhizosphere	MKTFIAVVASLLVNGGLLGGLGYSVQQLQAPPLGEVLIVQLPDDASLPTLADAHQVGPSAAR
Ga0307408_1002118332	3300031548	Rhizosphere	MKTFIAVVASVLVNAGALAGLAWSVHEAQAPPLGEVLIVQLPDDSAVPVIADARPVGPSAARAL
Ga0307408_1002923982	3300031548	Rhizosphere	MKTFIGIVASLLVNAAVIGGLAWSAYEQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0307408_1003543612	3300031548	Rhizosphere	MKTLLGIVASLLVNAGVIGGLAWSAYQQQLPPLGEVLIVQLPDDASLPQIADARSVGPSAARAL
Ga0310886_106668492	3300031562	Soil	AVMKTFIGVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL
Ga0307405_120583932	3300031731	Rhizosphere	MKTFIAVVASLLVNGGLLGGLGYSVQQLQAPPLGEVLIVQLPDDASLPTLADAHQVGPSAARAL
Ga0310907_105666632	3300031847	Soil	KTFIGVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL
Ga0307410_103109432	3300031852	Rhizosphere	MKTFIAVVSSLLVNGGVLGGLVYSVDQLQTPPFGEVLIVQLPDGATLPTLADAHQVGPSAARAL
Ga0310904_105278552	3300031854	Soil	QAVMKTFIGVVASLLVNAGILGGLAWSAYEKQLPPLGEVLIVQLPDNSTLPAIADVRSVGPSAARAL
Ga0310904_110201842	3300031854	Soil	TFIAVVSSLLVNGGVLGGLVYSVNQLQTPPLGEVLIVQLPDGVTLPTLADAHQVGPSAARAL
Ga0310904_110332742	3300031854	Soil	MRTFFGIVASMLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0307406_105538051	3300031901	Rhizosphere	AVVCKRVEQAVMKTFIAVVASLLVNGGLLGGLGYSVQQLQAPPLGEVLIVQLPDDASLPTLADAHQVGPSAARAL
Ga0307406_109407502	3300031901	Rhizosphere	MKTFIAVVASVLVNVGALGGLAWSVHDAQVPPLGEVLIVQLPDESALPAIADSRPVGPSAARAL
Ga0307407_109945081	3300031903	Rhizosphere	VRQRVEQAVMKTFIAVVASLLVNGGVLGGLAYSVEQLQAPPFGEVLIVQLPDGATLPTLADAHQVGPSAARAL
Ga0307407_112044902	3300031903	Rhizosphere	MKTFIGVVASLLVNAGLIGGLVLSAYEQQLPPLGEVLIVQLPDDASLPAIADARSVGPSAARAL
Ga0307412_114778592	3300031911	Rhizosphere	MRTFIGVVASLLVNVGVIGALAWSAYEQQLPPLGEVLVVQLPDDSSVPAIADVRSVGPSAARAL
Ga0307416_1014929962	3300032002	Rhizosphere	MKTFIAVVASLLVNGGVLGGLTYSVQALQAPPLGEVLIVQLPDGATLPTLANAQRVGPSAARAL
Ga0307416_1035898782	3300032002	Rhizosphere	MKTFIGIVASLLVNGAVLGGLAWSAYEQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0307411_104783972	3300032005	Rhizosphere	MKTFIAVVASVLVNAGALGGLAWSVHEAQVPPLGEVLIVQLPDESALPAIADSRPVGPSAARAL
Ga0307411_117510392	3300032005	Rhizosphere	ASLLVNAGVIGGLAWSAYQQQLPPLGEVLIVQLPDDASLPQIADARSVGPSAARAL
Ga0314788_015235_53_283	3300034666	Soil	VVHHFFFLEQAVMKTFFGIVASLLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL
Ga0314792_047926_129_323	3300034667	Soil	MKTFIGIVASLLVNAGVIGGLAWSAYQQQLPPLGEVLIVQLPDDSSLPQIAAVRSVGPSAARAL
Ga0314795_079659_234_428	3300034670	Soil	MRNFFGIVASMLVNVGVIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARAL
Ga0373948_0102069_2_187	3300034817	Rhizosphere Soil	LIGIVASLLVNAGLIGGLAWSAYQQQLPPLGEVLIVQLPDDGSLPQIADVRSVGPSAARA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073738

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences