 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F073717 |
| Family Type | Metagenome |
| Number of Sequences | 120 |
| Average Sequence Length | 47 residues |
| Representative Sequence | ALKQEYTKKVAKALPPKKALRYAQLETRIENMVRRDVYSLIPLAN |
| Number of Associated Samples | 84 |
| Number of Associated Scaffolds | 120 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 2.50 % |
| % of genes near scaffold ends (potentially truncated) | 98.33 % |
| % of genes from short scaffolds (< 2000 bps) | 90.00 % |
| Associated GOLD sequencing projects | 79 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.43 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (50.833 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (24.167 % of family members) |
| Environment Ontology (ENVO) | Unclassified (38.333 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Unclassified (37.500 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 56.16% β-sheet: 0.00% Coil/Unstructured: 43.84% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
| Powered by PDBe Molstar | |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 120 Family Scaffolds |
|---|---|---|
| PF13590 | DUF4136 | 25.00 |
| PF01624 | MutS_I | 2.50 |
| PF08299 | Bac_DnaA_C | 1.67 |
| PF05188 | MutS_II | 0.83 |
| PF00290 | Trp_syntA | 0.83 |
| PF01545 | Cation_efflux | 0.83 |
| PF05192 | MutS_III | 0.83 |
| PF00571 | CBS | 0.83 |
| PF01389 | OmpA_membrane | 0.83 |
| PF12806 | Acyl-CoA_dh_C | 0.83 |
| PF00702 | Hydrolase | 0.83 |
| COG ID | Name | Functional Category | % Frequency in 120 Family Scaffolds |
|---|---|---|---|
| COG0249 | DNA mismatch repair ATPase MutS | Replication, recombination and repair [L] | 4.17 |
| COG0593 | Chromosomal replication initiation ATPase DnaA | Replication, recombination and repair [L] | 1.67 |
| COG0053 | Divalent metal cation (Fe/Co/Zn/Cd) efflux pump | Inorganic ion transport and metabolism [P] | 0.83 |
| COG0159 | Tryptophan synthase alpha chain | Amino acid transport and metabolism [E] | 0.83 |
| COG1230 | Co/Zn/Cd efflux system component | Inorganic ion transport and metabolism [P] | 0.83 |
| COG2885 | Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins | Cell wall/membrane/envelope biogenesis [M] | 0.83 |
| COG3637 | Opacity protein LomR and related surface antigens | Cell wall/membrane/envelope biogenesis [M] | 0.83 |
| COG3965 | Predicted Co/Zn/Cd cation transporter, cation efflux family | Inorganic ion transport and metabolism [P] | 0.83 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 50.83 % |
| Unclassified | root | N/A | 49.17 % |
| Visualization |
|---|
| Powered by ApexCharts |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 24.17% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 14.17% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 7.50% |
| Wetland | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland | 6.67% |
| Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 5.83% |
| Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 4.17% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 3.33% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.33% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 3.33% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.33% |
| Sediment | Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment | 2.50% |
| Mangrove Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment | 2.50% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.50% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.67% |
| Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 1.67% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.67% |
| Sediment Slurry | Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry | 1.67% |
| Wetland Sediment | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment | 0.83% |
| Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 0.83% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.83% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.83% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.83% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.83% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.83% |
| Deep Subsurface | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface | 0.83% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.83% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.83% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
| 3300003858 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI | Environmental | Open in IMG/M |
| 3300003859 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006224 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG | Environmental | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006930 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC | Environmental | Open in IMG/M |
| 3300009009 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 | Environmental | Open in IMG/M |
| 3300009075 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 | Environmental | Open in IMG/M |
| 3300009078 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
| 3300009081 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 | Environmental | Open in IMG/M |
| 3300009085 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
| 3300009091 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300009111 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 | Environmental | Open in IMG/M |
| 3300009131 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 | Environmental | Open in IMG/M |
| 3300009157 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 | Environmental | Open in IMG/M |
| 3300009166 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
| 3300009167 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2) | Environmental | Open in IMG/M |
| 3300009169 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
| 3300009509 | Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11 | Environmental | Open in IMG/M |
| 3300009609 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 | Environmental | Open in IMG/M |
| 3300010412 | Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10 | Environmental | Open in IMG/M |
| 3300010413 | Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9 | Environmental | Open in IMG/M |
| 3300011422 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2 | Environmental | Open in IMG/M |
| 3300012038 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2 | Environmental | Open in IMG/M |
| 3300012175 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2 | Environmental | Open in IMG/M |
| 3300014257 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1 | Environmental | Open in IMG/M |
| 3300014268 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1 | Environmental | Open in IMG/M |
| 3300014306 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1 | Environmental | Open in IMG/M |
| 3300014313 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1 | Environmental | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300022204 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_8_1 | Environmental | Open in IMG/M |
| 3300022208 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1 | Environmental | Open in IMG/M |
| 3300022214 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1 | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025561 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025968 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027617 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027695 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027762 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027831 | Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes) | Environmental | Open in IMG/M |
| 3300027871 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
| 3300027890 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027899 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes) | Environmental | Open in IMG/M |
| 3300027956 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027975 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300031746 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20 | Environmental | Open in IMG/M |
| 3300031772 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20 | Environmental | Open in IMG/M |
| 3300031834 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0 | Environmental | Open in IMG/M |
| 3300031873 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0 | Environmental | Open in IMG/M |
| 3300031913 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4 | Environmental | Open in IMG/M |
| 3300031997 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0 | Environmental | Open in IMG/M |
| 3300032017 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032092 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121 | Environmental | Open in IMG/M |
| 3300032143 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0 | Environmental | Open in IMG/M |
| 3300032342 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0 | Environmental | Open in IMG/M |
| 3300032397 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0 | Environmental | Open in IMG/M |
| 3300033408 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT | Environmental | Open in IMG/M |
| 3300033413 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT | Environmental | Open in IMG/M |
| 3300033414 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B | Environmental | Open in IMG/M |
| 3300033416 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C | Environmental | Open in IMG/M |
| 3300033481 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT | Environmental | Open in IMG/M |
| 3300033483 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A | Environmental | Open in IMG/M |
| 3300033485 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A | Environmental | Open in IMG/M |
| 3300033487 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A | Environmental | Open in IMG/M |
| 3300033488 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C | Environmental | Open in IMG/M |
| 3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
| 3300033521 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300034080 | Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1 | Engineered | Open in IMG/M |
| 3300034420 | Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.1 | Engineered | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI10214J12806_120798752 | 3300000891 | Soil | LKQKYTKKIAKILSPKKALRYAQLETRIEIAVRSQVYSLIPLAH* |
| JGIcombinedJ13530_1065539021 | 3300001213 | Wetland | IEKERAALKQTYTSKVAKVLPPKKALRYAQIETRVETTIRSNVYSLIPLAN* |
| JGIcombinedJ13530_1094674541 | 3300001213 | Wetland | KQEYTKKIERVLPAKKALRYSQLETRIEILVRRNVYGLIPLAR* |
| Ga0031656_101696082 | 3300003858 | Freshwater Lake Sediment | ALKQTYTKKVAKALPPVKALRYAQIETRLDNMIRRDVYGLIPLAQ* |
| Ga0031656_101926512 | 3300003858 | Freshwater Lake Sediment | SAALKQAYTKKIEKVLPPKKALRYAQLETRLEILMRRNAYSLIPLAR* |
| Ga0031653_100677152 | 3300003859 | Freshwater Lake Sediment | VKYTDRIAKVLPGKKALRYAQLESRIENLTQRNIYTLIPLAR* |
| Ga0062593_1022427021 | 3300004114 | Soil | RMALKQSYTHRIAKAIPAKKALRYAQVETRIENMIRRDVYGLIPLAH* |
| Ga0063356_1038522732 | 3300004463 | Arabidopsis Thaliana Rhizosphere | LKEKMAIESERADLKQKYTRKIAKILSPKKALRFAQLETRIEIAVRSQVYSLIPLAH* |
| Ga0070703_105269252 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | EKDRMALKQSYTHRIAKAIPAKKALRYAQVETRIENMIRRDVYGLIPLAH* |
| Ga0068861_1010875963 | 3300005719 | Switchgrass Rhizosphere | DLKQKYTKKIAKILSPKKALRYAQLETRIEIAVRSQVYSLIPLAH* |
| Ga0068858_1012598941 | 3300005842 | Switchgrass Rhizosphere | QRLDLKQSYTKKFAKVLSPKKALRYAQLESRIETMIRRDVYSAIPLAK* |
| Ga0068860_1011914611 | 3300005843 | Switchgrass Rhizosphere | DTLTDAEATAGLKEKMAIESERADLKQKYTKKIAKILSPKKALRFAQLETRIELAVRSQVYSLIPLAH* |
| Ga0079037_1019012422 | 3300006224 | Freshwater Wetlands | KEREALKQTYTKKVAKVLPAKKALRYAQLETRIAILAQRNIYSLIPLAR* |
| Ga0075420_1000910885 | 3300006853 | Populus Rhizosphere | EKMAIEKERMALKQTYTRRVAKALPAKKALRYAQVETRIENMIRRDVYALIPLAI* |
| Ga0079303_104970542 | 3300006930 | Deep Subsurface | KYTAKVAKVLPPKKALRYAQIETRVETIVRSNVYTLIPLAN* |
| Ga0105105_101975151 | 3300009009 | Freshwater Sediment | KKMALEKQREDLKQAYTKKVAKVLPPIKALRYAQVETRVNNAIRNDVYSLIPIAQ* |
| Ga0105090_100261471 | 3300009075 | Freshwater Sediment | AKVLPPKKALRYAQIETRVDNMLRRDVYGLIPLAN* |
| Ga0105090_100400971 | 3300009075 | Freshwater Sediment | REALKQTYTKKVAKALPPIKALRYAQVETRVNNAIRNDVYTLIPIAQ* |
| Ga0105090_100681841 | 3300009075 | Freshwater Sediment | KTKMQIEKDREALKQTYTKKVAKVLPPVKALRYAQIETRLDNMLRREVYGLIPLAQ* |
| Ga0105090_100766591 | 3300009075 | Freshwater Sediment | KMAIEKEGAALKQKYTAKIAKELPPKKALRYAQLETRVQNLVTRNVYSLIPLAR* |
| Ga0105106_102633393 | 3300009078 | Freshwater Sediment | LKQQYTSKVAKVLPPKKALRYAQIETRVDNMLRRDVYGLIPLAN* |
| Ga0105106_110554301 | 3300009078 | Freshwater Sediment | QAYTRKVAKALPANKALRYAQLETRIDQMVRREVYGLIPLAK* |
| Ga0105098_101986181 | 3300009081 | Freshwater Sediment | IEKEREDLKQAYTKKIAKALPPVKALRYAQIETRLDNMLRREVYGMIPLAQ* |
| Ga0105103_105545862 | 3300009085 | Freshwater Sediment | ALKQEYTKKVAKALPPKKALRYAQLETRIENMVRRDVYSLIPLAN* |
| Ga0105103_105676971 | 3300009085 | Freshwater Sediment | AILKEKMAIEKEREALKQKYTTKIAKALPEKKALRYAQLETRIQLMLGRDIYNMIPLAR* |
| Ga0102851_102302711 | 3300009091 | Freshwater Wetlands | KEREALKQKYTAKIAKELPAKKALRYAQLETRIQTMIARDLYSIIPLAR* |
| Ga0102851_103678784 | 3300009091 | Freshwater Wetlands | GAALRQTYTKKIAKELPPKKALRYAQLETRIQNMIQRDVYSLIPLAR* |
| Ga0102851_108721951 | 3300009091 | Freshwater Wetlands | TYTKKVAKVLPPVKALRYAQIETRLDNMIRRDVYGLIPLAQ* |
| Ga0115026_100433294 | 3300009111 | Wetland | IEKDREALKQKYTAKIAKELPPKKALRYAQLETRIQTLIARDVYSMIPLAR* |
| Ga0115026_104795031 | 3300009111 | Wetland | ALKQKYTAKIAKVLPAKKALRYAQLETRVQNLIQRNVYSLIPLAR* |
| Ga0115026_109258621 | 3300009111 | Wetland | KVAKVLPPKKALRYAQIETRVDNMLRRDVYSLIPLAN* |
| Ga0115027_112911081 | 3300009131 | Wetland | KQREALKQEYTRKVAKVLPPKKALRYAQIETRVDNMLRRDVYSLIPLAN* |
| Ga0105092_104061411 | 3300009157 | Freshwater Sediment | MLKEKMDIEKERMALKQSYTRRIAKEIPTKKALRYAQVEKRFENIVRRDVYSLIPLAH* |
| Ga0105100_107186271 | 3300009166 | Freshwater Sediment | EGAALKQVYTKKIAKELPPKKALRYAQLETRIQNMIQRDVYSLIPLAR* |
| Ga0113563_101259621 | 3300009167 | Freshwater Wetlands | KEGAALKQKYTAKIAKELPPKKALRYAQLETRVQNLVTRNVYSLIPLAR* |
| Ga0113563_110256541 | 3300009167 | Freshwater Wetlands | REALKQEYTRKVAKVLPPKKALRYAQIETRVDNMLRRDVYSLIPLAN* |
| Ga0113563_127089511 | 3300009167 | Freshwater Wetlands | GEALKQKYTAKIAKELPAKKALRYAQLETRIQNLVARDVYSLIPLAR* |
| Ga0105097_102984963 | 3300009169 | Freshwater Sediment | ALKQVYTKKIAKELPPKKALRYAQLETRIQNMIQRDVYSLIPLAR* |
| Ga0105097_105044011 | 3300009169 | Freshwater Sediment | KIAKALPPVKALRYAQIETRLDNMLRREVYGMIPLAQ* |
| Ga0123573_103588823 | 3300009509 | Mangrove Sediment | MAIEKQRDALRQQYTKKIAKVLPGKKALRYAQLETRISVLLARNVYTLIPLAR* |
| Ga0105347_15109381 | 3300009609 | Soil | LKQKYTKKIAQILSPKKALRFAQLETRIEIAVRSQVYSLIPLAH* |
| Ga0136852_112116541 | 3300010412 | Mangrove Sediment | RMKLKQAYTKKVAKVLPAKKALRYAQIETRIDNMLRRDVYGLIPLAR* |
| Ga0136851_104777191 | 3300010413 | Mangrove Sediment | EKVLPAKKALRYAQIETRVDNMLRRDVYALIPLAR* |
| Ga0137425_11823021 | 3300011422 | Soil | EKMDIEKERMALKQSYTHRIAKAIPPKKALRYAQVETRIENIVRRDVYSLIPLAH* |
| Ga0137431_11126151 | 3300012038 | Soil | KQSYTRRIAKAIPPKKALRYAQVETRIENIVRRDVYSLIPLAH* |
| Ga0137321_10398963 | 3300012175 | Soil | ALKQSYTHRIAKAIPPKKALRYAQVETRIENIVRRDVYSLIPLAH* |
| Ga0075319_10707502 | 3300014257 | Natural And Restored Wetlands | MTLEKQREDLKQTYTKKVAKVLPPIKALRYAQVETRVNNMIRNDVYTLIPIAQ* |
| Ga0075309_10956253 | 3300014268 | Natural And Restored Wetlands | VAKALPANKALRYAQLETRIDQMVRREVYGLIPLAK* |
| Ga0075346_11864931 | 3300014306 | Natural And Restored Wetlands | IEKERAALKQTYTKKFAKALPAKKALRYAQLETRIDLMVQRNVYGLIPLAR* |
| Ga0075347_11584321 | 3300014313 | Natural And Restored Wetlands | LKQTYTKKVAKVLPAKKALRYAQLETRIQNMIERDVYSLIPLAR* |
| Ga0157380_107681301 | 3300014326 | Switchgrass Rhizosphere | KEKMAIESERADLKQKYTKKIAKILSPKKALRYAQLETRIEIAVRSQVYSLIPLAH* |
| Ga0132255_1005915491 | 3300015374 | Arabidopsis Rhizosphere | KIAKILSPKKALRYAQLETRIEIAVRSQVYSLIPLAH* |
| Ga0224496_101924971 | 3300022204 | Sediment | EKVLPPKKALRYAQIETRVDNMLRRDVYGLIPLAR |
| Ga0224495_100807931 | 3300022208 | Sediment | TYTRKVAKVLPPVKALRYAQIETRLDNMIRREVYGLIPLAQ |
| Ga0224505_102215342 | 3300022214 | Sediment | LKQKYTAKIAKELPPKKALRYAQLETRVQLLLGRDLYSLIPLAR |
| Ga0222622_108811761 | 3300022756 | Groundwater Sediment | YTKKIAKILSPKKALRFAQLETRIELAVRSQVYSLIPLAH |
| Ga0210119_10094451 | 3300025561 | Natural And Restored Wetlands | KKVEKVLPPKKALRYAQIETRVDNMLRRDVYGLIPLAR |
| Ga0207681_101207201 | 3300025923 | Switchgrass Rhizosphere | ESERADLKQKYTKKIAKILSPKKALRYAQLETRIEIAVRSQVYSLIPLAH |
| Ga0210103_10435261 | 3300025968 | Natural And Restored Wetlands | KEKMAIEKERDALKQEYTRKVANALPPKKALRYAQIETRVDNMLRRDVYSLIPLVN |
| Ga0207658_110033861 | 3300025986 | Switchgrass Rhizosphere | LCSPIHQKKFAKVLSPKKALRYAQLESRIETMIRRDVYSAIPLA |
| Ga0207641_118371461 | 3300026088 | Switchgrass Rhizosphere | TQKYTKKIAKILSPKKALRFAQLETRIELAVRSQVYSLIPLAH |
| Ga0207698_114686431 | 3300026142 | Corn Rhizosphere | KKIAKVLPAVKALRYAQVETRIENMLRRNVYGLIPLAR |
| Ga0210002_10085711 | 3300027617 | Arabidopsis Thaliana Rhizosphere | LKEKMAIEKDRMALKQSYTHRIAKAIPAKKALRYAQVETRIENMIRRDVYGLIPLAH |
| Ga0209966_10015405 | 3300027695 | Arabidopsis Thaliana Rhizosphere | MALKQSYTHRIAKAIPAKKALRYAQVETRIENMIRRDVYGLIPLAH |
| Ga0209288_101588282 | 3300027762 | Freshwater Sediment | YTDKVAKVLPPKKALRYAQIETRVDNMLRRDVYSLIPLAN |
| Ga0209797_103494842 | 3300027831 | Wetland Sediment | MLKRKMALEKERDALKQVYTKKVARVLPPIKALRYAQVETRVNNMIRNDVYSLIPIAQ |
| Ga0209397_100568071 | 3300027871 | Wetland | KQREALKQEYTRKVAKVLPPKKALRYAQIETRVDNMLRRDVYSLIPLAN |
| Ga0209397_101908693 | 3300027871 | Wetland | IEKDGAALKQKYTAKIAKVLPAKKALRYAQLETRVQNLIQRNVYSLIPLAR |
| Ga0209397_104100862 | 3300027871 | Wetland | LKEKMAIEKDREALKQKYTAKIAKELPPKKALRYAQLETRIQTLIARDVYSMIPLAR |
| Ga0209486_103809641 | 3300027886 | Agricultural Soil | YTHRIAKAIPPKKALRYAQVETRIENIIRRDVYGLIPLAH |
| Ga0209496_107495112 | 3300027890 | Wetland | TKKIAKVLPGKKALRYAQIESRITNLLRRNLYSVIPLAR |
| Ga0209668_106435372 | 3300027899 | Freshwater Lake Sediment | KQAYTAKVAKVLPPVKALRYAQVETRIETMIRRDVYSLIPLAQ |
| Ga0209668_107042041 | 3300027899 | Freshwater Lake Sediment | FALKQEYTKKVAKVLPGKKALRYAQIESRIETILRSQMLSLIPLAT |
| Ga0209820_11413891 | 3300027956 | Freshwater Sediment | AILKEKMAIEKEREALKQKYTTKIAKALPEKKALRYAQLETRIQLMLGRDIYNMIPLAR |
| Ga0209391_103655342 | 3300027975 | Freshwater Sediment | YTKKIAKELPPKKALRYAQLETRIQNMIQRDVYSLIPLAR |
| Ga0315293_112712541 | 3300031746 | Sediment | AKALPPVKALRYAQIETRLDNMIRREVYGLIPLAQ |
| Ga0315288_113304741 | 3300031772 | Sediment | QIYTKKVAKVLPAKKALRYAQIETRVETLLRSQLYSIIPLAN |
| Ga0315290_106878011 | 3300031834 | Sediment | IALKQAYTKKIATALPAKKALRYAQIETRIETMMRSQIYGLIPLAQ |
| Ga0315297_109043182 | 3300031873 | Sediment | REALKQTYTKKVAKALPPVKALRYAQIETRLDNMIRREVYGLIPLAQ |
| Ga0310891_102960652 | 3300031913 | Soil | MAIEKDRMALKQSYTHRIAKAIPAKKALRYAQVETRIENMIRRDVYGLIPLAH |
| Ga0315278_120483972 | 3300031997 | Sediment | KQAYTKKIATALPAKKALRYAQIETRIETMMRSQIYGLIPLAQ |
| Ga0310899_106976592 | 3300032017 | Soil | IESERADLKQKYTKKIAKILSPKKALRYAQLETRIEIAVRSQVYSLIPLAH |
| Ga0310890_102414321 | 3300032075 | Soil | SERADLKQKYTKKIAKILSPKKALRYAQLETRIEIAVRSQVYSLIPLAH |
| Ga0315905_109466952 | 3300032092 | Freshwater | EEARAALKQTYTKKIEKVLPPKKALRYAQLETRIDLINQRNVYGLLPLAR |
| Ga0315292_102702584 | 3300032143 | Sediment | YTKKVAKVLPAKKALRYAQIETRVETLLRSQLYSIIPLAN |
| Ga0315286_112559692 | 3300032342 | Sediment | MQIEKDREALKQTYTKKVAKALPPVKALRYAQIETRLDNMIRREVYGLIPLAQ |
| Ga0315287_101032981 | 3300032397 | Sediment | LKQTYTGKVAKVLPPVKALRYAQIETRLDNMIRREVYSLIPLAQ |
| Ga0315287_110454501 | 3300032397 | Sediment | TKMQIEKDREALKQTYTKKVAKVLPPVKALRYAQIETRLDNMIRREVYSLIPLAQ |
| Ga0316605_106870093 | 3300033408 | Soil | TAKIAKELPPKKALRYAQLETRVQNLVTRNVYSLIPLAR |
| Ga0316605_108302101 | 3300033408 | Soil | EKEREALKQQYTKKVEKALPGKKALRYAQLETRIQILIARDVYGLLPLAR |
| Ga0316605_110772663 | 3300033408 | Soil | IAKVLPGKKALRYAQIESRITNLLRRNLYSVIPLAR |
| Ga0316605_113698591 | 3300033408 | Soil | KMAIEKEGEALKQKYTAKIAKELPPKKALRYAQLESRVQNLVSRNVYTLIPLAR |
| Ga0316605_116761301 | 3300033408 | Soil | AIDKEREALKQTYTHKVAKALPANKALRYAQLETRIDQMVRRDVYGLIPLAK |
| Ga0316605_121656402 | 3300033408 | Soil | SAALKQAYTRKIAKALPPKKALRYAQLETRLEILMRRNAYSLIPLAR |
| Ga0316605_124304682 | 3300033408 | Soil | AKIAKELPAKKALRYAQLETRIQNLVARDVYSLIPLAR |
| Ga0316603_108539191 | 3300033413 | Soil | AKVLPGKKALRYAQIESRITNLLRRNLYSVIPLAR |
| Ga0316603_114225062 | 3300033413 | Soil | YTHKVAKALPANKALRYAQLETRIDQMVRRDVYGLIPLAK |
| Ga0316619_100589784 | 3300033414 | Soil | LKAKYTDRIAKVLPGLKALRYAQIESRIENLTQRNLYTLIPLAR |
| Ga0316619_112132392 | 3300033414 | Soil | LKEKMAIEKDREALKQKYTAKIAKELPAKKALRYAQLETRIQNMLARDLYSIIPLAR |
| Ga0316622_1000317001 | 3300033416 | Soil | AVKQKYTAKVAKVLPPKKALRYAQLETRIQLINATNLYSLIPLAR |
| Ga0316622_1005675821 | 3300033416 | Soil | ALLKEKMAIEKEGEALKQKYTAKIAKELPAKKALRYAQLETRIQNLVARDVYSLIPLAR |
| Ga0316622_1014411441 | 3300033416 | Soil | ALKQKYTAKIAKVLPAKKALRYAQLETRVQNLIQRNVYSLIPLAR |
| Ga0316622_1017365281 | 3300033416 | Soil | LKTKMRIEKDREALKQAYTKKVAKVLPPVKALRYAQIETRLENMLRREVYGLIPLAQ |
| Ga0316600_102773243 | 3300033481 | Soil | EALKQEYTRKVAKVLPPKKALRYAQIETRVDNMLRRDVYSLIPLAN |
| Ga0316600_105695203 | 3300033481 | Soil | LKQKYTAKIAKELPPKKALRYAQLETRIQTLIARDVYSMIPLAR |
| Ga0316600_111768711 | 3300033481 | Soil | KMAIEKEREALKQTYTHKVAKALPANKALRYAQLETRIDQMVRRDVYGLIPLAK |
| Ga0316629_103079131 | 3300033483 | Soil | TAKVAKVLPPKKALRYAQLETRIQLINATNLYSLIPLAR |
| Ga0316626_104010411 | 3300033485 | Soil | DREALKQTYTKKIAKVLPPVKALRYAQIETRLDNMIRRDVYGLIPLAQ |
| Ga0316630_101869214 | 3300033487 | Soil | EALKQAYTKKFAKVLPPKKALRYAQLETRISILAQRNLYSLIPLAR |
| Ga0316630_114156391 | 3300033487 | Soil | KDRSALKQTYTRKVAKVLPAKKALRYSQIETRVDMMVQRDVYTLIPLAN |
| Ga0316621_116132371 | 3300033488 | Soil | YTKKIAKVLPGKKALRYAQIESRITNLLRRNLYSVIPLAR |
| Ga0316628_1002807691 | 3300033513 | Soil | TKKIAKVLPGKKALRFAQIESRITNLLRRNLYSVIPLAR |
| Ga0316628_1027093311 | 3300033513 | Soil | AYTRKVAKALPANKALRYAQLETRIDQMVRRDVYGLIPLAK |
| Ga0316616_1008865233 | 3300033521 | Soil | IEKEREALKQTYTRKVAKALPANKALRYAQLETRIDQMVRRDVYGLIPLAK |
| Ga0316616_1010288121 | 3300033521 | Soil | KEGAALKQKYTAKIAKVLPAKKALRYAQLETRVQNLIQRNVYSLIPLAR |
| Ga0316616_1010997873 | 3300033521 | Soil | KVEKALPGKKALRYAQLETRIQILIARDVYGLLPLAR |
| Ga0316616_1030157711 | 3300033521 | Soil | EREALKQKYTAKIAKTLPEKKALRYAQLETRIQIMLARDLYSIIPLAR |
| Ga0247829_115049941 | 3300033550 | Soil | IAKILSPKKALRFAQLETRIEIAVRSQVYSLIPLAH |
| Ga0373897_102781_416_568 | 3300034080 | Sediment Slurry | EKEREALKQAYTRKVAKALPANKALRYAQLETRIDQMVRRDVYGLIPLAK |
| Ga0373918_0025678_3_131 | 3300034420 | Sediment Slurry | QAYTGKVAKALPPVKALRYAQIETRLDNMIRRDVYSLIPLAQ |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |