NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F073708

Metagenome Family F073708

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073708
Family Type Metagenome
Number of Sequences 120
Average Sequence Length 117 residues
Representative Sequence MYVVFVEELDGPEDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHYDLMSQAVDGRMKGHVALHVDAYQRARVMRNAQGARVQVAAEV
Number of Associated Samples 86
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.50 %
% of genes near scaffold ends (potentially truncated) 30.00 %
% of genes from short scaffolds (< 2000 bps) 85.00 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(11.667 % of family members)
Environment Ontology (ENVO) Unclassified
(80.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(85.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.29%    β-sheet: 29.45%    Coil/Unstructured: 47.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF07589PEP-CTERM 3.33
PF02586SRAP 2.50
PF136402OG-FeII_Oxy_3 2.50
PF11843DUF3363 1.67
PF01541GIY-YIG 1.67
PF03358FMN_red 0.83
PF02687FtsX 0.83
PF02518HATPase_c 0.83
PF04828GFA 0.83
PF00593TonB_dep_Rec 0.83
PF01381HTH_3 0.83
PF02566OsmC 0.83
PF03544TonB_C 0.83
PF11175DUF2961 0.83
PF05170AsmA 0.83
PF069833-dmu-9_3-mt 0.83
PF02674Colicin_V 0.83
PF05593RHS_repeat 0.83
PF06210DUF1003 0.83
PF00072Response_reg 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 2.50
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.83
COG1286Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formationCell wall/membrane/envelope biogenesis [M] 0.83
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.83
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.83
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.83
COG2982Uncharacterized conserved protein AsmA involved in outer membrane biogenesisCell wall/membrane/envelope biogenesis [M] 0.83
COG3209Uncharacterized conserved protein RhaS, contains 28 RHS repeatsGeneral function prediction only [R] 0.83
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.83
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.83
COG4420Uncharacterized membrane proteinFunction unknown [S] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_103303626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium507Open in IMG/M
3300000789|JGI1027J11758_10415970All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium507Open in IMG/M
3300003320|rootH2_10198308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3231Open in IMG/M
3300003322|rootL2_10104511All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2395Open in IMG/M
3300003322|rootL2_10346619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1101Open in IMG/M
3300003323|rootH1_10090901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1947Open in IMG/M
3300005327|Ga0070658_10202337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1676Open in IMG/M
3300005327|Ga0070658_10529360All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1019Open in IMG/M
3300005334|Ga0068869_101781433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium550Open in IMG/M
3300005335|Ga0070666_10155292All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1598Open in IMG/M
3300005335|Ga0070666_10206727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1382Open in IMG/M
3300005344|Ga0070661_100127775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1908Open in IMG/M
3300005344|Ga0070661_101763065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium525Open in IMG/M
3300005347|Ga0070668_101060105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium730Open in IMG/M
3300005354|Ga0070675_100889337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium816Open in IMG/M
3300005356|Ga0070674_100738780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium845Open in IMG/M
3300005364|Ga0070673_101083644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium748Open in IMG/M
3300005367|Ga0070667_101182290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium716Open in IMG/M
3300005455|Ga0070663_101588231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium583Open in IMG/M
3300005456|Ga0070678_100640054All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium953Open in IMG/M
3300005458|Ga0070681_11842424All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium532Open in IMG/M
3300005511|Ga0077121_10187702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1683Open in IMG/M
3300005511|Ga0077121_10654761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium670Open in IMG/M
3300005513|Ga0077120_1193565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium672Open in IMG/M
3300005547|Ga0070693_101371382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium549Open in IMG/M
3300005548|Ga0070665_100126679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2556Open in IMG/M
3300005548|Ga0070665_100156505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2280Open in IMG/M
3300005548|Ga0070665_100731596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1002Open in IMG/M
3300005548|Ga0070665_101650456All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium648Open in IMG/M
3300005618|Ga0068864_102317827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium543Open in IMG/M
3300005834|Ga0068851_10478427All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium744Open in IMG/M
3300005842|Ga0068858_100598010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1070Open in IMG/M
3300006028|Ga0070717_10829785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium841Open in IMG/M
3300006237|Ga0097621_100000068All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria53385Open in IMG/M
3300006237|Ga0097621_100000103All Organisms → cellular organisms → Bacteria → Proteobacteria47664Open in IMG/M
3300006237|Ga0097621_100044971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3564Open in IMG/M
3300006237|Ga0097621_100175505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1849Open in IMG/M
3300006358|Ga0068871_100074481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2801Open in IMG/M
3300006358|Ga0068871_102192246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium526Open in IMG/M
3300006804|Ga0079221_11789352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium503Open in IMG/M
3300006806|Ga0079220_12018554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium515Open in IMG/M
3300009093|Ga0105240_10145215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2832Open in IMG/M
3300009093|Ga0105240_10443566All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1454Open in IMG/M
3300009148|Ga0105243_12231177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium584Open in IMG/M
3300009156|Ga0111538_14073247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium505Open in IMG/M
3300009174|Ga0105241_10398187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1207Open in IMG/M
3300009174|Ga0105241_10581858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1009Open in IMG/M
3300009176|Ga0105242_10019021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium5381Open in IMG/M
3300009177|Ga0105248_10208597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2201Open in IMG/M
3300009551|Ga0105238_10315941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1548Open in IMG/M
3300009551|Ga0105238_10883188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium912Open in IMG/M
3300009551|Ga0105238_11824364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium640Open in IMG/M
3300009553|Ga0105249_10562039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1192Open in IMG/M
3300009553|Ga0105249_10712937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1064Open in IMG/M
3300009553|Ga0105249_12060718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium643Open in IMG/M
3300009688|Ga0116176_10463519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium616Open in IMG/M
3300010375|Ga0105239_10244636All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2014Open in IMG/M
3300010375|Ga0105239_10541730All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1325Open in IMG/M
3300010375|Ga0105239_10809786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1073Open in IMG/M
3300012900|Ga0157292_10339901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium551Open in IMG/M
3300012924|Ga0137413_11126080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium622Open in IMG/M
3300012930|Ga0137407_10923622All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium826Open in IMG/M
3300012956|Ga0154020_10620045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium882Open in IMG/M
3300013105|Ga0157369_10630033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1106Open in IMG/M
3300013296|Ga0157374_10252967All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1734Open in IMG/M
3300013296|Ga0157374_10305783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1574Open in IMG/M
3300013296|Ga0157374_10538839All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1174Open in IMG/M
3300013306|Ga0163162_10055439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3990Open in IMG/M
3300014325|Ga0163163_10000177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria66222Open in IMG/M
3300014325|Ga0163163_12829953All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium541Open in IMG/M
3300014326|Ga0157380_10341582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1397Open in IMG/M
3300014968|Ga0157379_10070077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3137Open in IMG/M
3300014968|Ga0157379_10288523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1494Open in IMG/M
3300014969|Ga0157376_10236325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1700Open in IMG/M
3300014969|Ga0157376_10662762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1045Open in IMG/M
3300014969|Ga0157376_11088667All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium825Open in IMG/M
3300015189|Ga0167667_1018303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1966Open in IMG/M
3300015201|Ga0173478_10742547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium531Open in IMG/M
3300015242|Ga0137412_10501583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium929Open in IMG/M
3300015374|Ga0132255_104038305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium623Open in IMG/M
3300017965|Ga0190266_10301374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium836Open in IMG/M
3300018476|Ga0190274_11009826All Organisms → cellular organisms → Bacteria → Proteobacteria907Open in IMG/M
3300019890|Ga0193728_1125958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1155Open in IMG/M
3300020027|Ga0193752_1125804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1026Open in IMG/M
3300020034|Ga0193753_10384029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium569Open in IMG/M
3300024288|Ga0179589_10458331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium589Open in IMG/M
3300025297|Ga0209758_1063037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1210Open in IMG/M
3300025297|Ga0209758_1133956All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium651Open in IMG/M
3300025899|Ga0207642_10374843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium845Open in IMG/M
3300025903|Ga0207680_10260000All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1201Open in IMG/M
3300025907|Ga0207645_11045413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium552Open in IMG/M
3300025909|Ga0207705_10590029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium864Open in IMG/M
3300025909|Ga0207705_10967083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium658Open in IMG/M
3300025913|Ga0207695_10197728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1926Open in IMG/M
3300025919|Ga0207657_10080152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2745Open in IMG/M
3300025924|Ga0207694_11125924All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium664Open in IMG/M
3300025924|Ga0207694_11306269All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium613Open in IMG/M
3300025926|Ga0207659_11244953All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium639Open in IMG/M
3300025934|Ga0207686_10146176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1640Open in IMG/M
3300025934|Ga0207686_10267250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1257Open in IMG/M
3300025935|Ga0207709_11662887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium531Open in IMG/M
3300025938|Ga0207704_10661704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium861Open in IMG/M
3300025941|Ga0207711_10497317All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300025961|Ga0207712_11112275All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium703Open in IMG/M
3300025961|Ga0207712_11269340All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium658Open in IMG/M
3300025972|Ga0207668_10865364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium803Open in IMG/M
3300025981|Ga0207640_10818069All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium808Open in IMG/M
3300026023|Ga0207677_10258702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1418Open in IMG/M
3300026023|Ga0207677_10268365All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1395Open in IMG/M
3300026035|Ga0207703_10774747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium915Open in IMG/M
3300026078|Ga0207702_11316162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium717Open in IMG/M
3300026095|Ga0207676_11036957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium809Open in IMG/M
3300026142|Ga0207698_11510157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium687Open in IMG/M
3300026555|Ga0179593_1105403All Organisms → cellular organisms → Bacteria2607Open in IMG/M
3300028379|Ga0268266_10098719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2570Open in IMG/M
3300028379|Ga0268266_10224506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1728Open in IMG/M
3300028379|Ga0268266_10699164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium977Open in IMG/M
3300028381|Ga0268264_11858387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium612Open in IMG/M
3300031057|Ga0170834_108947452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium965Open in IMG/M
3300031231|Ga0170824_103855542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium577Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere11.67%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere10.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere5.83%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.17%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere4.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.17%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.33%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil3.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.50%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.67%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.67%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.67%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.83%
Active SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge0.83%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003320Sugarcane root Sample H2Host-AssociatedOpen in IMG/M
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005511Combined assembly of arab plate scrape MF_Col (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005513Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009688Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaGEngineeredOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012956Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MGEngineeredOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015189Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025297Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10330362613300000364SoilMYVVFAEELEPGKDPQHIARTLDQAFAQIACRCGYSYRFESVEHGWHLVLIDVERPECSPEPIHSSCIKPRDAQYDLMRQAVDGRLQGHVALETEAYRRVQLMRNSQGTRILLADAS*
JGI1027J11758_1041597013300000789SoilMYVVXAEELEPGKDPQHIARTLDQAFAQIACRCGYSYRFESVEHGWHLVLIDVERPECSPEPIHSSCIKPRDAQYDLMRQAVXGRLQGHVALETEAYRRVQLMRNSQGTRILLADAS*
rootH2_1019830833300003320Sugarcane Root And Bulk SoilMYVVFVEELEGPQDPIHTARTLEQAFAQIACRCGYSYRFEPAQEHGWCLFLTDVERPERSPDPIHSSCIRMRDAQHDLMRQAVDGRLKGHVALHTEAYQRARVMRNAQAARVQVAAE*
rootL2_1010451133300003322Sugarcane Root And Bulk SoilMYVVFVGELEAEQKPMHIARTMEQAFAQIVCRCGYSYRFEPAQEYGWCLFLIDVERPERSPDPIHSSCIRMRDAQHDLMRQAVDGRLKGHVALHTEAYQRARVMRNAQAARVQVAAE*
rootL2_1034661933300003322Sugarcane Root And Bulk SoilMYVVFVEELEGPKDPIHTAKTLEQAFAQIACRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSNCIKPRDAQHDLMSQAVDGRLKGHVAMHADAFRRARIMRNAQGTRTHVG*
rootH1_1009090113300003323Sugarcane Root And Bulk SoilMYVVFVEELDGPQDPLHTAKTLEQAFAQIACRCGYSYRFEPADEHGWCLFLTDVERPERSPDPIHSNCIKPRDAQHDLMSQAVDGRLKGHVALHIEAYRRARVARSGNGSKVFLETHG*
Ga0070658_1020233733300005327Corn RhizosphereVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE*
Ga0070658_1052936033300005327Corn RhizosphereMYVVFVEETENAFAGQPLHTARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMSQAVDGRLQGHVALSVDAFRRARIARATSGTKVQLEAHG
Ga0068869_10178143313300005334Miscanthus RhizosphereMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDRSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFMRARVSRTAAGSKVTVEV*
Ga0070666_1015529243300005335Switchgrass RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQFDLMSQAVDGRLRGHVALPVATYQRARLIKNPKGTQVQIAGA*
Ga0070666_1020672733300005335Switchgrass RhizospherePISDPGCRDGASVPALGAGLFTGIVLYLFSTGFEGRTAVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE*
Ga0070661_10012777513300005344Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVATYQRARLIRNANGPQVQVA
Ga0070661_10176306513300005344Corn RhizosphereEGRTAVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE*
Ga0070668_10106010523300005347Switchgrass RhizosphereMYVVFVEELDAGQEPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRSQVMRNGQGVRVQFAEAG*
Ga0070675_10088933733300005354Miscanthus RhizosphereMYVVFVEELDAGQEPQHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFLR
Ga0070674_10073878023300005356Miscanthus RhizosphereMYVVFVEETEDAITDPLYTARTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVETYQRARMIRNANGPQIHVAAEA*
Ga0070673_10108364423300005364Switchgrass RhizosphereMYVVFVEELDAGQGPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRSQVMRNGQGVRVQFAEAG*
Ga0070667_10118229013300005367Switchgrass RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQFDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIQVAAEA*
Ga0070663_10158823113300005455Corn RhizosphereMRPQPLWLDSFANMFSICSHIMREGETGMYVVFVEELDAGQEPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE*
Ga0070678_10064005413300005456Miscanthus RhizosphereMYVVFVEETEDAITDPLYTARTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIHVAAEA*
Ga0070681_1184242413300005458Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVATYQRARLIRNANGPQIQVAAEA*
Ga0077121_1018770223300005511Arabidopsis RhizosphereMYVVFVEEVGGPQDPIHTARTLEQAFAQIVCRCGYSYRFEPADEHGWCLFLTDVERPERSPDPIHSSCIKPRDAQHDLMSQAVDGRLRGHVALHIDVYRRAQVLRAGNGSKVLLEAYG*
Ga0077121_1065476123300005511Arabidopsis RhizosphereGQEPQHIARTLDQAFAMIVCRCGYSYRFEAAQEQGWLLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAYLRARVARTGEGSKVYLEAAE*
Ga0077120_119356513300005513Arabidopsis RhizosphereMYVVFVEELEAGEKPLHIAKTLEQAFAQIACRCGYSYKILPAEEHGWCLFLIDVERPDRSPDPIHSTCIKPRDAQHDLMSQAVDGRMKGHVAMHDEMYRRARIA
Ga0070693_10137138213300005547Corn, Switchgrass And Miscanthus RhizosphereMYVVFVEELESDQDPIHTARTLDQAFAMIVCRCGYSYRFEAAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLQGHVALHGDAFLRARISHTRSGSRVFVEAAE*
Ga0070665_10012667943300005548Switchgrass RhizosphereMYVVFVEELEGPQDPIHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHYDLMSQAVDGRLKGHVALRVDAYRRARVARTSTRSKVQLEVHG*
Ga0070665_10015650523300005548Switchgrass RhizosphereMYVVFVEELDAGQEPSQEHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFLRARISRTGGGSKVYVEASA
Ga0070665_10073159623300005548Switchgrass RhizosphereMYVVFVEELEGPLDPIYTGRTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSSCIKPRDAQYDLMSQAVDGRLKGHVALHVDAYQRARIARVTGGTKVQLEANG*
Ga0070665_10165045613300005548Switchgrass RhizosphereVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKV
Ga0068864_10231782713300005618Switchgrass RhizosphereMYVVFVEELEAGQEPLHIARTLEQAFAQIACRCGYSYKFEPADEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQHDLMSQAVDGRLRGHVALHIAAYQRARVTRTAQGSRVHVAAEA*
Ga0068851_1047842723300005834Corn RhizosphereMYVVFVEETEDAITDPLYTARTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQHDLMSQAVDGRLKGHVALPVETYQRARMIRNANGPQIHVAAEA*
Ga0068858_10059801023300005842Switchgrass RhizosphereMYVVFVEELEGPQDPVHTAKTLEQAFAQIACRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAHHDLMSQAVDGRLKGHVALHADAYRRARVMRVADQSRVQLETHG*
Ga0070717_1082978533300006028Corn, Switchgrass And Miscanthus RhizosphereMYVVIVEELEGPQDPIHTANSLEQAFAQIACRCGYSYRFEPAQELGWCLFLTDVERPERSPEPIHSSCIKPRDAQHDLMSQAVDGRLRGHVALQLEAYQRARILRNAAGARVQLALP*
Ga0097621_100000068463300006237Miscanthus RhizosphereMYVVFVEELEAGQEPLHIARNVEQAFAQIACRCGYSYRFEGEEHGWRLVLIDVERPECSPEPIHSTCIKPRDAQYDLMRQAVDGRLKGHVALEADAYRRAQALRNTKGASMRVAAGA*
Ga0097621_100000103163300006237Miscanthus RhizosphereMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDCSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFMRARVSRTASGSKVIVEEAPV*
Ga0097621_10004497143300006237Miscanthus RhizosphereMYVVFVEELESDQDPIHTARTLDQAFAMIVCRCGYSYRFEAAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFLRARISHTRSGSRVFVEAAE*
Ga0097621_10017550523300006237Miscanthus RhizosphereMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDRSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHAEAFKRARVSRTASGSKVYVEEANL*
Ga0068871_10007448133300006358Miscanthus RhizosphereMYVVFVEELDGDPKPEQITRTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQYDLMRQAVDGRLKGHVALETEAFARARVMRNGQGSRVLLADAS*
Ga0068871_10219224623300006358Miscanthus RhizosphereYTARTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIHVAAEA*
Ga0079221_1178935213300006804Agricultural SoilMYVVFVEETEDTFQDPLHIAKTLEQAFAQIVCRCGYSYRFASEKSGWLLVLTDVERPERSPEPVHSTCIKPRDAQHDLMAQAVDGRLKGHVALHIDDYRRARVTRTNSGRKVYVDPHA*
Ga0079220_1201855413300006806Agricultural SoilMYVVFVEELEGPQDPIHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLTDVERPDRSPDPIHSTCIKPRDAQHDLMSQAVDGPLTGHVALNIEAYS
Ga0105240_1014521573300009093Corn RhizosphereMYVVFVEELEGPQDPVHTARTLEQAFAQITCRCGYSYRFEPAQEQGWCLFLIDVERPERRPDPIHSTCIKPRDAHHDLMTQAVDGRLKGHVALHIEAYRRARIMRSGAGNSVRLEAQG*
Ga0105240_1044356613300009093Corn RhizosphereAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVATYQRARLIRNANGPQIQVAAEA*
Ga0105243_1223117723300009148Miscanthus RhizosphereLFLSSKEGEAAMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDRSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFKRARVSRTAAGSKVYVEEANL*
Ga0111538_1407324723300009156Populus RhizosphereYVVFVEELDAGQEPGQENIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFARSQVMRNGQGVRVQFAEAG*
Ga0105241_1039818713300009174Corn RhizosphereMYVVFVEELESDQDPIHTARTLDQAFAMIVCRCGYSYRFEAAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMTQAVDGRIRGHVAIRDDLFGRARIMESAQHRQAAG*
Ga0105241_1058185813300009174Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLNGHVALPVETYQRVRLMRNANGPRIQVAAEA*
Ga0105242_1001902173300009176Miscanthus RhizosphereMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDCSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHRDAFMRARVSRTASGSKVIVGA*
Ga0105248_1020859723300009177Switchgrass RhizosphereMYVVFVEELEGPQDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMAQAVDGRLKGHVALHIEAYRRARIMRSGAGNAVKLEAQG*
Ga0105238_1031594123300009551Corn RhizosphereVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAVDGRLKGHVALHGETFARARVMHTRNGGKVYVEAAE*
Ga0105238_1088318813300009551Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKARDAQYDLMSQAVDGRLKGHVALPVETYQHARLIRNVHGSQIQAAEA*
Ga0105238_1182436413300009551Corn RhizosphereETLSDPIHTARTLEQAFAQIACRCGYSYRFEPAQELGWCLFLTDIERPERSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALHIDTYQRVRVMRNARGARVQFAAEAG*
Ga0105249_1056203913300009553Switchgrass RhizosphereMRENSMYVVFVEETEDAFEGPLHTAKTLEQAFAQIACRCGYSYRFEPAQEHGWCLFLTDVQRPERSPEPIHSTCIKQRDAQYDLMSRAVDGRLKGHVALPAEAYQRARVTRTSGGSKVRLEAHG*
Ga0105249_1071293723300009553Switchgrass RhizosphereMRESGMYVVFVEELEGPQDPLHTARTLEQAFAQIACRCGYFYRFEAAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMTQAVDGRLKGHVALHVDAYQRARVMRNAQGARVHVAAGL*
Ga0105249_1206071813300009553Switchgrass RhizosphereQMYVVFVEELEGPQDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRSQVMRNGQGVRVQFAEAG*
Ga0116176_1046351923300009688Anaerobic Digestor SludgeMYVVFVEELDAGHEPQPEHIARTLDQAFAMIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHYDLMRQAVDGRLKGYIALEREAFMRANLMRNAQGVRVQLAG*
Ga0105239_1024463663300010375Corn RhizosphereMYVVFVEELGGPQDPIYTAKTLGQAFAQIACRCGYSYHFEPAQEHGWCLFLTDVARPDRSPEPIHSTCIKPGDAQQDLMSRAVDGRLRGHVALTVDAYERGRVPGGFVRPTGR*
Ga0105239_1054173033300010375Corn RhizosphereAIADPLYTARTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVATYQRARLIRNANGPQIQVAAEA*
Ga0105239_1080978613300010375Corn RhizosphereVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAF
Ga0157292_1033990123300012900SoilMAVYVVFVEELDGDPAPQYIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQYDLMRQAVDGRLKGHVALEAEAFQRARLMRSAQGTRVQLAEAG
Ga0137413_1112608013300012924Vadose Zone SoilMAVYVVFVEELDGDPEPQHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQFDLMRQAVDGRLKGHVALNMDAYRRANVMRNAQGTRVQLAEAG
Ga0137407_1092362213300012930Vadose Zone SoilMAVYVVFIEELDGDPEPQHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQFDLMRQAVDGRMKGHVALDAEAYRRARIGKAGDKSKVYLEAAG
Ga0154020_1062004513300012956Active SludgeMYVVFVEELDAGQEPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPEPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARISRTSGGSKVYLEATA*
Ga0157369_1063003323300013105Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFARIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQFDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIQVAAEA*
Ga0157374_1025296743300013296Miscanthus RhizosphereLFLSSKEGEAVMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDRSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFKRARVSRTASGSKVIVEALG*
Ga0157374_1030578333300013296Miscanthus RhizosphereMYVVFVEELEGPQDPVHTARTLEQAFAQITCRRGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMTQAVDGRLKGHVALHIEAYRRARIMRSGAGNSVRLEAHG*
Ga0157374_1053883913300013296Miscanthus RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQFDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIQLAA
Ga0163162_1005543943300013306Switchgrass RhizosphereMYVVFVEQLEGPEDPLHTAKTLEQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPVHSTCIKPRDAHYDLMSQAVDGRMKGHVALHVDAYQRARVMRNL*
Ga0163163_10000177373300014325Switchgrass RhizosphereMYVVFVEELDGPEDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHYDLMSQAVDGRMKGHVALHVDAYQRARVMRNAQGARVQVAAEV*
Ga0163163_1282995313300014325Switchgrass RhizosphereMYVVFVEETEDAFEGPLHTARTLEQAFAQIACRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVETYQRVRLIKSAKGSQVQIAAEA*
Ga0157380_1034158233300014326Switchgrass RhizosphereMYVVFVEELDAGQEPGQENIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFARSQVMRNGQGVRVQFAEAG
Ga0157379_1007007743300014968Switchgrass RhizosphereMRESGMYVVFVEELEGPQDPLHTARTLEQAFAQIACRCGYSYRFEAAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMTQAVDGRLKGHVALHVDAYQRARVMRNAQGARVPVAAGL*
Ga0157379_1028852333300014968Switchgrass RhizosphereMYVVFVEELEGPQDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMAQAVDGRLKGHVALHIEAYRRARIMRSGAGNAVKLEAHG*
Ga0157376_1023632543300014969Miscanthus RhizosphereMAVYVVFVEELDGDPEPQYIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQFDLMSQAVDGRLKGHVALHLDAWRRARVSRTQGGSRIHVEAAE
Ga0157376_1066276223300014969Miscanthus RhizosphereMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDRSPDPIHSSCIKPRDAKHHLLSQAIDGRLKGHVALHAEAFKRARVSRTASGSKVYVEE
Ga0157376_1108866713300014969Miscanthus RhizosphereMYVVFVEELESDQDPIHTARTLDQAFAMIVCRCGYSYRFEAAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFLRARVSHTRSGSKVYLETQG*
Ga0167667_101830323300015189Glacier Forefield SoilMYVVFVEELDAGQEPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDALHSTCIKPRDAQHDLMSQAVDGRLKGHVALQGDAFLRARVIRNARGAHVQLADAS*
Ga0173478_1074254713300015201SoilRTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQHDLMRQAIDGRLKGHVALHGEAFLRSQVMRNGQGVRVLLAEAG*
Ga0137412_1050158313300015242Vadose Zone SoilMYVVFVEEMDGDPEPQHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQFDLMRQAVDGRLKGHVALNMDAYRRANVMRNAQGTRVQLAEAG*
Ga0132255_10403830523300015374Arabidopsis RhizosphereMYVVFVEELESDQDPIHTARTLDQAFAMIVCRCGYSYRFEPAQEQGWCLFLIDVERPDRSPDPIHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFLRARVSHTRGGSRVHVE
Ga0190266_1030137423300017965SoilGQEPSQENIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFARSQVMRNGQGVRVQFAEAG
Ga0190274_1100982623300018476SoilMAVYVVFVEELDGDPAPQYIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQYDLMRQAVDGRLKGHVALTAEAYQRARVMRSSRAARVQLAEAGSVRSGGARNDTPCRALKG
Ga0193728_112595823300019890SoilMYVVFVEELEAGQETLHIARTLEQAFAQIACRCGYSYRFEGEEHGWRLVLTDVERPECSPDSIHSTCIKPRDAQHDLMSQAVDGRLKGHVALEAEAYQRARLARVGGNTKIYVEAHG
Ga0193752_112580423300020027SoilMYVVFVEELDAGQEPQHIARTLDQAFAMIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPEPLHSTCIKPRDAQHDLMSQAVDGRLKGHVALHGDAFLRARVMRNTQGARVQLAE
Ga0193753_1038402923300020034SoilAGQEPLHIARTLEQAFAQIACRCGYSYRFESADEEGWCLFLIDVERPERGPDPIHSNCIKPRDAQYHLMAQAVDGRMKGHVALDVDTYRRSRVMRAGGQSKVLLDAMAEPSL
Ga0179589_1045833123300024288Vadose Zone SoilYVVFVEELDGDPEPQHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQFDLMSQAVDGRMKGHVALSLDAYRRANVMRNAQGTRVHVAAGF
Ga0209758_106303723300025297Arabidopsis RhizosphereMYVVFVEEVGGPQDPIHTARTLEQAFAQIVCRCGYSYRFEPADEHGWCLFLTDVERPERSPDPIHSSCIKPRDAQHDLMSQAVDGRLRGHVALHIDVYRRAQVLRAGNGSKVLLEAYG
Ga0209758_113395623300025297Arabidopsis RhizosphereARTLDQAFAMIVCRCGYSYRFEAAQEQGWLLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAYLRARVARTGEGSKVYLEAAE
Ga0207642_1037484323300025899Miscanthus RhizosphereMYVVFVEETEDAITDPLYTARTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIHVAAEA
Ga0207680_1026000013300025903Switchgrass RhizosphereVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE
Ga0207645_1104541313300025907Miscanthus RhizosphereMYVVFVEETEDAITDPLYTARTLEQAFAQIVCRCGYSYRFEGEEHGWRLVLIDVERPECSPEPIHSTYIKPRDAQYDLMRQAVDGRLKGHVALEADAYRRAQV
Ga0207705_1059002923300025909Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKARDAQYDLMSQAVDGRLKGHVALPVETYQHARLIRNVHGSQIQAAEA
Ga0207705_1096708313300025909Corn RhizosphereMYVVFVEELEGPKDPIHTARTLQQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPEPIHSTCIKPRDAHHDLMSQAVDGRLKGHVALHIDAYQRARV
Ga0207695_1019772843300025913Corn RhizosphereMYVVFVEELEGPQDPVHTARTLEQAFAQITCRCGYSYRFEPAQEQGWCLFLIDVERPERRPDPIHSTCIKPRDAHHDLMTQAVDGRLKGHVALHIEAYRRARIMRSGAGNSVRLEAQG
Ga0207657_1008015213300025919Corn RhizosphereLGAGLFTGIVLYLFSTGFEGRTAVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE
Ga0207694_1112592413300025924Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQFDLMSQAVDGRLKGHVALPVETYQHARLIRNVHGSQIQAAEA
Ga0207694_1130626913300025924Corn RhizospherePALGAGLFTGIVLYLFSTGFEGRTAVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE
Ga0207659_1124495323300025926Miscanthus RhizospherePERILRETGMYVVFVEELDAGQEPQHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRSQVMRNGQGVRVLLAEAG
Ga0207686_1014617643300025934Miscanthus RhizosphereQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDCSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHRDAFMRARVSRTASGSKVIVGA
Ga0207686_1026725013300025934Miscanthus RhizosphereMYVVFVEETEDAITDPLYTARTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVETYQRARMIRNANGPQIHVAAEA
Ga0207709_1166288723300025935Miscanthus RhizosphereMYVVFVEELQNGQDPLTTARTLDQAFAQIVCRCGYSYAFESDAEGWRLVLTDVERPDRSPDPIHSSCIKPRDAQHDLMSQAIDGRLKGHVALHGDAFLRARISHTRSGSKVYVEAAE
Ga0207704_1066170433300025938Miscanthus RhizosphereMYVVFVEELDAGQEPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRSQVMRNGQGVRVQFAEAG
Ga0207711_1049731723300025941Switchgrass RhizosphereMYVVFVEELEGPQDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMAQAVDGRLKGHVALHIEAYRRARIMRSGAGNAVKLEAQG
Ga0207712_1111227513300025961Switchgrass RhizosphereMYVVFVEELGGPQDPIYTAKTLGQAFAQIACRCGYSYHFEPAQEHGWCLFLTDVARPDRSPEPIHSTCIKPGDAQQDLMSRAVDGRLRGHVALTVDAYQRARVARTNNRSEVFLEAHG
Ga0207712_1126934023300025961Switchgrass RhizosphereMYVVFVEELEGPQDPLHTARTLEQAFAQIACRCGYFYRFEAAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMTQAVDGRLKGHVALHVDAYQRARVMRNAQGARVHVAAGL
Ga0207668_1086536423300025972Switchgrass RhizosphereMYVVFVEELDAGQEPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRSQVMRNGQGVRVLLAEAG
Ga0207640_1081806913300025981Corn RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE
Ga0207677_1025870243300026023Miscanthus RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVEDAARFNYQAW
Ga0207677_1026836533300026023Miscanthus RhizosphereMYVVFVEELDAGQEPQHIARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE
Ga0207703_1077474723300026035Switchgrass RhizosphereMYVVFVEELEGPQDPVHTAKTLEQAFAQIACRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSTCIKPRDAHHDLMSQAVDGRLKGHVALHADAYRRARVMRVADQSRVQLETHG
Ga0207702_1131616223300026078Corn RhizospherePLHTAKTLEQAFAQIVCRCGYSYRFEPAQEYGWCLFLTDVERPDRSPDPIHSTCIKPRDAQFDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIQLAAEA
Ga0207676_1103695713300026095Switchgrass RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALPVATYQRARLIRNANGPQIQVAAEA
Ga0207698_1151015713300026142Corn RhizosphereLYLFSTGFEGRTAVYVVFVEELESNQDPVHTARTLDQAFAMVVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAFLRARVMHNRSGSKVYVEAAE
Ga0179593_110540343300026555Vadose Zone SoilMYVVFVEELDGDPEPQHIARTLDQAFAQIVCRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAQFDLMSQAVDGRMKGHVALSLDAYRRANVMRNAQGTRVHVAAGF
Ga0268266_1009871943300028379Switchgrass RhizosphereMYVVFVEELEGPQDPIHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHYDLMSQAVDGRLKGHVALRVDAYRRARVARTSTRSKVQLEVHG
Ga0268266_1022450623300028379Switchgrass RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQFDLMSQAVDGRLKGHVALPVETYQRARLIRNANGPQIQVAAEA
Ga0268266_1069916423300028379Switchgrass RhizosphereMYVVFVEELEGPLDPIYTGRTLEQAFAQIVCRCGYSYRFEPAQEHGWCLFLTDVERPDRSPDPIHSSCIKPRDAQYDLMSQAVDGRLKGHVALHVDAYQRARIARVTGGTKVQLEANG
Ga0268264_1185838713300028381Switchgrass RhizosphereMYVVFIEETEDAITAPLHTAKTLEQAFAQIVCRCGYSYRFEPAQELGWCLFLTDVERPDRSPDPIHSTCIKPRDAQYDLMSQAVDGRLKGHVALSAELYERARIVRNSQTVRVQVAAE
Ga0170834_10894745233300031057Forest SoilMYVVFVEELEGPQDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERIPDPIHSTCIKPRDAHHDLMSQAVDGRLRGHVALHIDAYRRARIMRSGAGNAVKLEAHG
Ga0170824_10385554213300031231Forest SoilMYVVFVEELEGPQDPVHTARTLEQAFAQIACRCGYSYRFEPAQEQGWCLFLIDVERPERSPDPIHSTCIKPRDAHHDLMSQAVDGRLRGHVALHIDAYRRARIMRSGAGNAVKLEAHG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.