Metagenome Family F073694

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073694
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	78 residues
Representative Sequence	GAVYVCAAGSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Number of Associated Samples	94
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.83 %
% of genes near scaffold ends (potentially truncated)	92.50 %
% of genes from short scaffolds (< 2000 bps)	92.50 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (9.167 % of family members)
Environment Ontology (ENVO)	Unclassified (65.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (80.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.45% β-sheet: 14.02% Coil/Unstructured: 49.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00211	Guanylate_cyc	8.33
PF04536	TPM_phosphatase	2.50
PF01979	Amidohydro_1	1.67
PF00313	CSD	1.67
PF13424	TPR_12	1.67
PF07883	Cupin_2	1.67
PF00561	Abhydrolase_1	1.67
PF03992	ABM	0.83
PF13495	Phage_int_SAM_4	0.83
PF01695	IstB_IS21	0.83
PF13384	HTH_23	0.83
PF02735	Ku	0.83
PF13649	Methyltransf_25	0.83
PF04239	DUF421	0.83
PF01548	DEDD_Tnp_IS110	0.83
PF12697	Abhydrolase_6	0.83
PF07813	LTXXQ	0.83
PF13924	Lipocalin_5	0.83
PF07394	DUF1501	0.83
PF00378	ECH_1	0.83
PF13333	rve_2	0.83
PF13279	4HBT_2	0.83
PF00392	GntR	0.83
PF04986	Y2_Tnp	0.83
PF13594	Obsolete Pfam Family	0.83
PF12477	TraW_N	0.83
PF01564	Spermine_synth	0.83
PF03795	YCII	0.83
PF04392	ABC_sub_bind	0.83
PF00756	Esterase	0.83
PF00662	Proton_antipo_N	0.83
PF00550	PP-binding	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	8.33
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.33
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.67
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.83
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.83
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	0.83
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.50 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	63.33 %
Unclassified	root	N/A	6.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.50 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.67 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.83 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.67 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.67 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-3	0.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	0.83 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.67 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.83 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-3	0.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.67 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.83 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-3	0.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001991\|JGI24743J22301_10006791	All Organisms → cellular organisms → Bacteria → Proteobacteria	1964	Open in IMG/M
3300002076\|JGI24749J21850_1031426	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300002077\|JGI24744J21845_10018602	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300002128\|JGI24036J26619_10013130	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300002239\|JGI24034J26672_10013886	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300002239\|JGI24034J26672_10091825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	564	Open in IMG/M
3300004157\|Ga0062590_102278193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	569	Open in IMG/M
3300004463\|Ga0063356_104520257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	598	Open in IMG/M
3300005180\|Ga0066685_10200852	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300005290\|Ga0065712_10046353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	940	Open in IMG/M
3300005328\|Ga0070676_10134016	All Organisms → cellular organisms → Bacteria → Proteobacteria	1570	Open in IMG/M
3300005328\|Ga0070676_10367149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	993	Open in IMG/M
3300005331\|Ga0070670_101328361	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005331\|Ga0070670_101481092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	623	Open in IMG/M
3300005331\|Ga0070670_102135261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	516	Open in IMG/M
3300005334\|Ga0068869_101360631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	627	Open in IMG/M
3300005334\|Ga0068869_101932569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	529	Open in IMG/M
3300005338\|Ga0068868_100009760	All Organisms → cellular organisms → Bacteria → Proteobacteria	6925	Open in IMG/M
3300005339\|Ga0070660_100697219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	851	Open in IMG/M
3300005353\|Ga0070669_101166228	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300005365\|Ga0070688_100475846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	938	Open in IMG/M
3300005366\|Ga0070659_101369101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	628	Open in IMG/M
3300005457\|Ga0070662_100615217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	914	Open in IMG/M
3300005457\|Ga0070662_100740004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	833	Open in IMG/M
3300005459\|Ga0068867_101075132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	733	Open in IMG/M
3300005526\|Ga0073909_10325930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	705	Open in IMG/M
3300005530\|Ga0070679_101575361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	604	Open in IMG/M
3300005539\|Ga0068853_101625210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	626	Open in IMG/M
3300005548\|Ga0070665_100333056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1522	Open in IMG/M
3300005564\|Ga0070664_101509912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	636	Open in IMG/M
3300005564\|Ga0070664_101809650	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005578\|Ga0068854_101824246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	558	Open in IMG/M
3300005614\|Ga0068856_100443324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1319	Open in IMG/M
3300005616\|Ga0068852_102318098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	558	Open in IMG/M
3300005719\|Ga0068861_100221491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1599	Open in IMG/M
3300005937\|Ga0081455_10646604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	682	Open in IMG/M
3300005937\|Ga0081455_10989649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	521	Open in IMG/M
3300006237\|Ga0097621_100532014	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300009093\|Ga0105240_12777831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	504	Open in IMG/M
3300009094\|Ga0111539_11480536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	787	Open in IMG/M
3300009098\|Ga0105245_10351168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1461	Open in IMG/M
3300009098\|Ga0105245_11052425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	859	Open in IMG/M
3300009098\|Ga0105245_12978396	Not Available	525	Open in IMG/M
3300009146\|Ga0105091_10708810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	528	Open in IMG/M
3300009147\|Ga0114129_11444921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	847	Open in IMG/M
3300009156\|Ga0111538_12909355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	599	Open in IMG/M
3300009174\|Ga0105241_10211774	All Organisms → cellular organisms → Bacteria → Proteobacteria	1624	Open in IMG/M
3300009177\|Ga0105248_11487712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	766	Open in IMG/M
3300009177\|Ga0105248_13019806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	536	Open in IMG/M
3300009177\|Ga0105248_13270416	Not Available	515	Open in IMG/M
3300009551\|Ga0105238_11663644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	669	Open in IMG/M
3300009551\|Ga0105238_13078026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	500	Open in IMG/M
3300010358\|Ga0126370_10420964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-3	1104	Open in IMG/M
3300010375\|Ga0105239_10584828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1273	Open in IMG/M
3300010396\|Ga0134126_10816162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1053	Open in IMG/M
3300012515\|Ga0157338_1023286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	739	Open in IMG/M
3300012892\|Ga0157294_10080748	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300012910\|Ga0157308_10109093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	828	Open in IMG/M
3300012913\|Ga0157298_10348927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	544	Open in IMG/M
3300012987\|Ga0164307_10066211	All Organisms → cellular organisms → Bacteria → Proteobacteria	2139	Open in IMG/M
3300013105\|Ga0157369_12070648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	577	Open in IMG/M
3300013297\|Ga0157378_11697017	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300013297\|Ga0157378_12363614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	583	Open in IMG/M
3300013297\|Ga0157378_12806916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	540	Open in IMG/M
3300013297\|Ga0157378_13304988	Not Available	501	Open in IMG/M
3300013308\|Ga0157375_10438548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1472	Open in IMG/M
3300014322\|Ga0075355_1119778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	672	Open in IMG/M
3300014326\|Ga0157380_10924638	Not Available	900	Open in IMG/M
3300014969\|Ga0157376_10461581	Not Available	1241	Open in IMG/M
3300015371\|Ga0132258_10622226	All Organisms → cellular organisms → Bacteria	2712	Open in IMG/M
3300015371\|Ga0132258_11517045	All Organisms → cellular organisms → Bacteria → Proteobacteria	1692	Open in IMG/M
3300015372\|Ga0132256_101272042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	849	Open in IMG/M
3300015373\|Ga0132257_101241093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	944	Open in IMG/M
3300015374\|Ga0132255_102668748	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300025315\|Ga0207697_10370704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	636	Open in IMG/M
3300025321\|Ga0207656_10257994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	855	Open in IMG/M
3300025907\|Ga0207645_10229453	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300025907\|Ga0207645_10752173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	663	Open in IMG/M
3300025919\|Ga0207657_11018052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	635	Open in IMG/M
3300025920\|Ga0207649_10687673	Not Available	793	Open in IMG/M
3300025923\|Ga0207681_10103076	All Organisms → cellular organisms → Bacteria → Proteobacteria	2061	Open in IMG/M
3300025925\|Ga0207650_10210046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1563	Open in IMG/M
3300025925\|Ga0207650_11717773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	532	Open in IMG/M
3300025926\|Ga0207659_10557866	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300025927\|Ga0207687_11418416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	597	Open in IMG/M
3300025930\|Ga0207701_10540773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	995	Open in IMG/M
3300025931\|Ga0207644_11605028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	545	Open in IMG/M
3300025933\|Ga0207706_11573076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	534	Open in IMG/M
3300025936\|Ga0207670_11646485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	546	Open in IMG/M
3300025937\|Ga0207669_10219768	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300025937\|Ga0207669_10269251	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300025945\|Ga0207679_10920335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	800	Open in IMG/M
3300025949\|Ga0207667_10149289	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300025986\|Ga0207658_10264664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300025986\|Ga0207658_11535659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	609	Open in IMG/M
3300026023\|Ga0207677_10003652	All Organisms → cellular organisms → Bacteria → Proteobacteria	8165	Open in IMG/M
3300026023\|Ga0207677_12243282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	508	Open in IMG/M
3300026035\|Ga0207703_12256551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	520	Open in IMG/M
3300026041\|Ga0207639_11826894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	568	Open in IMG/M
3300026041\|Ga0207639_11845693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	565	Open in IMG/M
3300026067\|Ga0207678_11667770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	560	Open in IMG/M
3300026078\|Ga0207702_10414701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1301	Open in IMG/M
3300026089\|Ga0207648_10530546	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300026095\|Ga0207676_12166031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	554	Open in IMG/M
3300026118\|Ga0207675_102486502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	529	Open in IMG/M
3300026118\|Ga0207675_102506514	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026142\|Ga0207698_12701049	Not Available	505	Open in IMG/M
3300026329\|Ga0209375_1027868	All Organisms → cellular organisms → Bacteria → Proteobacteria	3101	Open in IMG/M
3300028380\|Ga0268265_10215382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1677	Open in IMG/M
3300028592\|Ga0247822_10191199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1526	Open in IMG/M
3300028802\|Ga0307503_10646277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	589	Open in IMG/M
3300031548\|Ga0307408_100103404	All Organisms → cellular organisms → Bacteria → Proteobacteria	2174	Open in IMG/M
3300031548\|Ga0307408_101003115	Not Available	770	Open in IMG/M
3300031940\|Ga0310901_10507306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	541	Open in IMG/M
3300032013\|Ga0310906_11372408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	518	Open in IMG/M
3300032211\|Ga0310896_10027587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2098	Open in IMG/M
3300032211\|Ga0310896_10464935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	687	Open in IMG/M
3300032954\|Ga0335083_11148276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	604	Open in IMG/M
3300033419\|Ga0316601_101205132	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300034129\|Ga0370493_0228442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	626	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	78.33%
Environmental	Environmental	21.67%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	78.33%
Terrestrial	Environmental → Terrestrial	20.83%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	45.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	31.67%
Soil	Environmental → Terrestrial → Soil	20.83%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	27.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.33%
Loam	Environmental → Terrestrial → Soil → Loam	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	27.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24743J22301_100067913	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	ASIPTGAVYVCAAGSGRDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
JGI24749J21850_10314262	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	AVYVCAAGSGRDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
JGI24744J21845_100186023	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	DRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
JGI24036J26619_100131303	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	AVYVCAAGSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
JGI24034J26672_100138861	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	TGAVYVCAAGSGKDRTIAAIALEXKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
JGI24034J26672_100918252	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	IAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0062590_1022781931	3300004157	Soil	IPAGAVYVCASGSGKARTIAAIELEEKVAALCRRHTEMGPCQNARNACRRRGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0063356_1045202571	3300004463	Arabidopsis Thaliana Rhizosphere	LEAALIPTGAVYVCVAGGERDRTIRPIELQERVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEITQADEAEYDKKVMRVRVGP*
Ga0066685_102008521	3300005180	Soil	AVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVTRVRVGP*
Ga0065712_100463532	3300005290	Miscanthus Rhizosphere	GSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRRGGRVYAADGSEVTQAYEAEYDKKVMRVRVGP*
Ga0070676_101340163	3300005328	Miscanthus Rhizosphere	VCAAGNGKDRTIAAIQLEEKVAAICRRHTEMGPCQNARNVCRRSGGRVYAADGSEVTQADEAEYDKKVMRLRVGP*
Ga0070676_103671492	3300005328	Miscanthus Rhizosphere	VVYVCAAGSGTDRKIEAIKLDEKVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEITKADEAEYDKKVMRLRVGP*
Ga0070670_1013283611	3300005331	Switchgrass Rhizosphere	TIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0070670_1014810922	3300005331	Switchgrass Rhizosphere	DAASIPTGAVYVCVAGSEKDRKIAPIELGEKVAELCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0070670_1021352611	3300005331	Switchgrass Rhizosphere	AVYVCAAGSGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP*
Ga0068869_1013606311	3300005334	Miscanthus Rhizosphere	TIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGGEVTQADEAEYDKKVTRVRVGP*
Ga0068869_1019325691	3300005334	Miscanthus Rhizosphere	GAVFVCAAGSGKNRTIATIELEEKVAALCRCHPEMGPCQYARNACRRSGGRVYASDGSEITQADEAEYDKKVMRVRIGP*
Ga0068868_10000976010	3300005338	Miscanthus Rhizosphere	DKLPAASIPAGAVYVCAAGTGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP*
Ga0070660_1006972192	3300005339	Corn Rhizosphere	AAGSGKDRKIAPIEMGEKVAELCRRHTEMGPCQNARNACRRSGGRVYGADGSEVTLADEAEYDKKVMRVRVGP*
Ga0070669_1011662281	3300005353	Switchgrass Rhizosphere	RTIATIELEEKVAALCRRHPEMGPCQYARNACRRSGGRVYASDGSEITQADEAEYDKKVMRVRVGP*
Ga0070688_1004758462	3300005365	Switchgrass Rhizosphere	TGAVYVCVAGSEKDRKIAPIELGEKVAELCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0070659_1013691012	3300005366	Corn Rhizosphere	GAVYVCAAGSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0070662_1006152172	3300005457	Corn Rhizosphere	KLDAASIPTGAVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRRGGRVYAADGSEVTQADEAEYDRKVMRVSVGP*
Ga0070662_1007400042	3300005457	Corn Rhizosphere	KLDAAYIPVGAVYVCATGAGKNRTIAAIELEKKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGKEITQADEAEYDKKVMRLRLGP*
Ga0068867_1010751321	3300005459	Miscanthus Rhizosphere	DKLDAASLPPGVVYVCAAGRGTDRKIEAIKLDEKVAALCRRHTEMGPCQSARNSCRSSGGRVYAADGSEITQADEAEYDKKVMPLRVGP*
Ga0073909_103259301	3300005526	Surface Soil	LDAASIPTGAVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0070679_1015753611	3300005530	Corn Rhizosphere	SGAVYVCAAGTGKDRRIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGKEITQADEAEYDKKVMRLRLGP*
Ga0068853_1016252101	3300005539	Corn Rhizosphere	AYIPVGAVYVCATGAGKNRTIAAIELEKKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGKEITQADEAEYDKKVMRLRLGP*
Ga0070665_1003330563	3300005548	Switchgrass Rhizosphere	VPFTFAAAGSGRDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0070664_1015099121	3300005564	Corn Rhizosphere	GKDRTIATIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAHDGSEITQADETEYDKKVMRVRVGP*
Ga0070664_1018096501	3300005564	Corn Rhizosphere	LEQKVAALCRRHPEMGPCQNARNACRRSGGRVYAADGSEITQAEEAEYDKKVMRLRVGP*
Ga0068854_1018242462	3300005578	Corn Rhizosphere	GSGKNRTIATIELEDKVAALCRRHPEMGPCQYARNSCRRSGGRVYASDGREITQADEAEYDKKVMRTRVGS*
Ga0068856_1004433242	3300005614	Corn Rhizosphere	ADKLDAASIPTGAVYVCIAGSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0068852_1023180981	3300005616	Corn Rhizosphere	IPTGAVYVCVAGGERDRTIRPIELQERVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEITQADEAEYDKKVMRVRVGP*
Ga0068861_1002214911	3300005719	Switchgrass Rhizosphere	TIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0081455_106466041	3300005937	Tabebuia Heterophylla Rhizosphere	AASIPTGAVYVCAAGSGKDRTIAAIELEEKAAALCRRHPEMGPCQNARNACRRTGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0081455_109896491	3300005937	Tabebuia Heterophylla Rhizosphere	AASIPAGAIYVCAAGSGKDRTIAAIDLEEKVAALCRRHPEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRTRVGP*
Ga0097621_1005320141	3300006237	Miscanthus Rhizosphere	DAASIPTGAVYVCAAGSGKDRTIAAIKLEEKVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEVTQADEAEYNKKVMRVRVGP*
Ga0105240_127778312	3300009093	Corn Rhizosphere	DAASIPTGAVYVCAAGTGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRGGGRVYAADGVEITQADEAEYDKKVVRMRVGP*
Ga0111539_114805362	3300009094	Populus Rhizosphere	MADKLEVASIPTGAVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADDAEYDKKVIRVRVGP*
Ga0105245_103511681	3300009098	Miscanthus Rhizosphere	PDKLDAASIPPGVVYVCAAGSGTDRKIEAIKLDEKVAALCRRHTEMGPCQSARNACRSGGGRVYAADGSEITQADEAEYDKKVMRLRVGP*
Ga0105245_110524251	3300009098	Miscanthus Rhizosphere	SIPAGAVYVCAAGTGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP*
Ga0105245_129783962	3300009098	Miscanthus Rhizosphere	EKVAALCRRHTEMGPCQNARNACRRSGGGVYAADGSEVTQADEAEYDKKVLRVRVGP*
Ga0105091_107088101	3300009146	Freshwater Sediment	VAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEITQADEIEYDKKVMRMRVGP*
Ga0114129_114449211	3300009147	Populus Rhizosphere	DAASIPTGAVYVCATGSGKDRTIAAIELEEKVAALCRRHPEMGPCQNARNACRRSGGRVYAADGSEITQADEAEYDKKVMRVRVGP*
Ga0111538_129093551	3300009156	Populus Rhizosphere	MADKLEVASIPTGAVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVIRVRVGP*
Ga0105241_102117741	3300009174	Corn Rhizosphere	GAVYVCAAGSGKDRKISVIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0105248_114877121	3300009177	Switchgrass Rhizosphere	AVADKLDAASIPTGAVYVCAGGSGKDRTIAAIELEEKVAALCRRHPEMGPCQYARSTCRRSGGRVYAADGSEITQANEAEYDKKVMRVRVGQ*
Ga0105248_130198061	3300009177	Switchgrass Rhizosphere	SIPTGAVYVCAAGNGKDRTIAAIQLEEKVAAICRRHTEMGPCQNARNVCRRSGGRVYAADGSEVTQADEAEYDKKVMRLRVGP*
Ga0105248_132704162	3300009177	Switchgrass Rhizosphere	GKDRTIATIQLDQKVAALCRRHTEMGPCQSARNACRKNGGRVYGADGREITQADEIEYDKRVMRMRVGP*
Ga0105238_116636442	3300009551	Corn Rhizosphere	MADKLDAASIPTGAVYVCAAGTGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRRGGRVYAADGVEITQADEAEYDKKVMRMRVGP*
Ga0105238_130780261	3300009551	Corn Rhizosphere	DAASIPTGAVYVCAKGTGKNRTIAAIELDEKVGSLCRRHTEMGPCQNARNACRGSGGRVYAADGNEITQANEAEYDKKVMRLRLGP*
Ga0126370_104209642	3300010358	Tropical Forest Soil	PTGAVYVCATGSGKDRTIAAIELEEKVASLCRRHTEMGPCQSARNGCRRSGGRVYGADGREVTQADEAEYDKKVMRVRVGP*
Ga0105239_105848283	3300010375	Corn Rhizosphere	PSGAVYVCAAGSGKDRKIAPIEMGEKVAELCRRHTEMGPCQNARNACRRSGGRVYGADGSEVTLADEAEYDKKVMRLRVGP*
Ga0134126_108161622	3300010396	Terrestrial Soil	DAASIPTGAVYVCAAGTGKNRTIAAIELEERVAALCRRHTEMGPCQNARNACRRSGGRVYAADGKEITQADEAEYDKKVMRLRLGP*
Ga0157338_10232861	3300012515	Arabidopsis Rhizosphere	KLDAASIPSGAVYVCAAGSGKDRKIAPIEMGEKVAELCRRHTEMGPCQNARNACRRSGGRVYGADGSEVTLADEAEYDKKVMRVRVGP*
Ga0157294_100807481	3300012892	Soil	AAGSGRDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0157308_101090932	3300012910	Soil	DKLDAASIPTGAVYVCAAGSGKDRTIAAIALEEKIAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0157298_103489271	3300012913	Soil	STPLRFRPVPFTFAAAGSGRDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0164307_100662113	3300012987	Soil	GSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0157369_120706481	3300013105	Corn Rhizosphere	EKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEITQADEAEYDKKVMRVRVGP*
Ga0157378_116970171	3300013297	Miscanthus Rhizosphere	KVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP*
Ga0157378_123636142	3300013297	Miscanthus Rhizosphere	AIADKLDAASIPTGAVYVCAAGSGKDRKIAAIELEEKAAALCRRHSEMGPCQNARNACRRSGGRVYAADGSEITQADEAEYDKKVMRVRVGS*
Ga0157378_128069161	3300013297	Miscanthus Rhizosphere	MADKLDAASIPAGAVYVCATGSGKNRTIAAIKLEEKVAALCRRHTEMGPCQNARNACRRNGGRVYAADGSEITQAAEAEYDKKVLRVRVGS*
Ga0157378_133049881	3300013297	Miscanthus Rhizosphere	CVVGNGKDRTIATIELEAKVAALCRRNTEMGPCQTARTACRRSGGRVYAHDGSEITQADETEYDKKVMRVRVGP*
Ga0157375_104385481	3300013308	Miscanthus Rhizosphere	MADKLDAASIPTGAVYVCAAGSGKDRTIAAIKLEEKVAALCRRHTEMGPCQSARNACRRSGGRVYAADGSEITEADEAEYDKKVMRMRVGS*
Ga0075355_11197783	3300014322	Natural And Restored Wetlands	GAVYVCATGSGKARTVTPIALDEKVAALCRRHTEMGPCQNARNECRRRGGRVYAADGNEVTPADEAAYDSKVMRMRVGP*
Ga0157380_109246382	3300014326	Switchgrass Rhizosphere	GVGNGKERTIATSELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAHDGSEITQADETEYDKKVMRVRVGP*
Ga0157376_104615813	3300014969	Miscanthus Rhizosphere	ADKLEAALIPTGAVYVCVAGGGKDRTIRPIELQEKVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEITQADEAEYDKKVMRVRVGP*
Ga0132258_106222261	3300015371	Arabidopsis Rhizosphere	EKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP*
Ga0132258_115170451	3300015371	Arabidopsis Rhizosphere	PAGAVYICATGSGKDRTITTIELEQKVGALCLRHTEMGPCQYARNACRKIGGRVYAADGSEITQADEAEFDKKVMRVRVAP*
Ga0132256_1012720422	3300015372	Arabidopsis Rhizosphere	GSGKNRTIAAIALEEKVAALCRRHTEMSPCQNARNACRRSGGRVYAADGSEITQADETEYDKKVMRMRVGS*
Ga0132257_1012410931	3300015373	Arabidopsis Rhizosphere	ERVAAICRRHPEMGPCQNARNACRRSGGRVYAADGSEITQADEAEYDKKVMRVRVGS*
Ga0132255_1026687482	3300015374	Arabidopsis Rhizosphere	AVYVCATGSGKNRTIAVIELEAKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRLRVGP*
Ga0207697_103707042	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	DKLPAASIPAGAVYVCAAGSGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP
Ga0207656_102579942	3300025321	Corn Rhizosphere	DRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRRGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0207645_102294531	3300025907	Miscanthus Rhizosphere	GVVYVCAAGSGTDRKIEAIKLDEKVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEITKADEAEYDKKVMRLRVGP
Ga0207645_107521731	3300025907	Miscanthus Rhizosphere	VCAAGNGKDRTIAAIQLEEKVAAICRRHTEMGPCQNARNVCRRSGGRVYAADGSEVTQADEAEYDKKVMRLRVGP
Ga0207657_110180522	3300025919	Corn Rhizosphere	VYVCAAGSGKDRKIAPIEMGEKVAELCRRHTEMGPCQNARNACRRSGGRVYGADGSEVTLADEAEYDKKVMRVRVGP
Ga0207649_106876732	3300025920	Corn Rhizosphere	MSVDNAASIPTGAVYVCAKGSGKNRTIATIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYASDGNEITQADE
Ga0207681_101030761	3300025923	Switchgrass Rhizosphere	IAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0207650_102100461	3300025925	Switchgrass Rhizosphere	AVYFCVAGGERDRTIRPIELQERVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEITQADEAEYDKKVMRVRVGP
Ga0207650_117177731	3300025925	Switchgrass Rhizosphere	AVYVCAAGSGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP
Ga0207659_105578663	3300025926	Miscanthus Rhizosphere	GAVYVCATGSGKDRTIAAIELQEKVAALCRRHSEMGPCQSARNACRRSGGRVYAADGSEITEADEAEYDKKVMRMRVGS
Ga0207687_114184161	3300025927	Miscanthus Rhizosphere	RKIEAIKLDEKVAALCRRHTEMGPCQSARNACRSGGGRVYAADGSEITQADEAEYDKKVMRLRVGP
Ga0207701_105407733	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	FADKLDAASIPTGAVYVCATGSGKERTIATIELQEKVAALCRSHSEMGPCQSARTACRRSGGRVYATDGSEITLADEAEYDKKVMRMRVGS
Ga0207644_116050281	3300025931	Switchgrass Rhizosphere	VCAAGTGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP
Ga0207706_115730761	3300025933	Corn Rhizosphere	PVGAVYVCATGAGKNRTIAAIELEKKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGKEITQADEAEYDKKVMRLRLGP
Ga0207670_116464852	3300025936	Switchgrass Rhizosphere	MGEKVAELCRRHTEMGPCQNARNACRRSGGRVYGADGSEVTLADEAEYDKKVMRVRVGP
Ga0207669_102197684	3300025937	Miscanthus Rhizosphere	GKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP
Ga0207669_102692511	3300025937	Miscanthus Rhizosphere	VPFTFAAAGSGRDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0207679_109203352	3300025945	Corn Rhizosphere	DAVSIPTGAVYVCAAGSGKNRTIAAIALEEKVAALCRRHTEMSPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVIRVRVGP
Ga0207667_101492893	3300025949	Corn Rhizosphere	VYVCATGAGKNRTIAAIELEKKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGKEITQADEAEYDKKVMRLRLGP
Ga0207658_102646642	3300025986	Switchgrass Rhizosphere	MPDKLDAASIPPGVVYVCAAGSGTDRKIEAIKLDEKVAALCRRHTEMGPCQSARNACRSSGGRVYAADGSEITQADEAEYDKKVMRLRVGP
Ga0207658_115356591	3300025986	Switchgrass Rhizosphere	VGSGKDRTIATIELEERVASLCRRHTEMGPCQNARNACRKSGGRVYDADGREITQADEIEYDKRVMRMRVGP
Ga0207677_1000365211	3300026023	Miscanthus Rhizosphere	AMADKLPAASIPAGAVYVCAAGTGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP
Ga0207677_122432821	3300026023	Miscanthus Rhizosphere	KLDAASIPSGAVYVCAAGSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0207703_122565511	3300026035	Switchgrass Rhizosphere	RPVPFTFAAAGSGRDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0207639_118268941	3300026041	Corn Rhizosphere	AIADKLDAAYIPVGAVYVCATGAGKNRTIAAIELEKKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGKEITQADEAEYDKKVMRLRLGP
Ga0207639_118456931	3300026041	Corn Rhizosphere	MADKLPAASIPAGAVYVCAAGSGKDRKLVPIALDEKVAALCRRHTEMGPCQSARNACRSNGGRVYAADGSEITRADEAEYDKKVTRVRVGP
Ga0207678_116677701	3300026067	Corn Rhizosphere	VASIPTGAVFVCVVGNGKDRTIATIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAHDGSEITQADETEYDKKVMRVRVGP
Ga0207702_104147012	3300026078	Corn Rhizosphere	IADKLDAASIPSGAVYVCAAGSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0207648_105305463	3300026089	Miscanthus Rhizosphere	AIQLEEKVAAICRRHTEMGPCQNARNVCRRSGGRVYAADGSEVTQADEAEYDKKVMRLRVGP
Ga0207676_121660311	3300026095	Switchgrass Rhizosphere	TDRRIAVIELEEKVAAICRRHPEMGPCQNARNACRRSGGRVYAADGSEITQADEAEYDKKVLRVRVGS
Ga0207675_1024865022	3300026118	Switchgrass Rhizosphere	YVCAAGSGKDRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0207675_1025065142	3300026118	Switchgrass Rhizosphere	ATIQLEEKVAALCRRHTEMGPCQSARNACRKNGGRVYGADGREITQADEIEYDKKVMRMRVGP
Ga0207698_127010492	3300026142	Corn Rhizosphere	GAVYVCATGSGKDRTIATIKLEEKVAALCRRHTEMGPCQNARNACRSTGGRVYAPDGSEITQADETEYDKKVTRVRIGP
Ga0209375_10278681	3300026329	Soil	ADKLDAASIPPGAVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVTRVRVGP
Ga0268265_102153821	3300028380	Switchgrass Rhizosphere	PSAVYVCAAGSGKDRTITTIELDEKVAALCRRHTEMGPCQVARNACRRSGGRVYAADGSEVTAADEAEYDKKVMRLRVGL
Ga0247822_101911991	3300028592	Soil	IPTGAVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVIRVRVGP
Ga0307503_106462771	3300028802	Soil	KLDAASIPTGAVFVCAVGSGKDRAIATIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAHDGSEITQADETEYDKKVMRVRVGP
Ga0307408_1001034043	3300031548	Rhizosphere	GGKDRTIAAIQLEERVAALCRRHPEMGPCQYARNGCRASGGRVYAADGSEITQADEAEYDKKVMRRRVGP
Ga0307408_1010031151	3300031548	Rhizosphere	VPFTLRRRQRKGSDNATIELEEKVAALCRRHIESPCQNARNACHRSGGRVYAANGSEVTPADEAEYDKKVMRVRVGP
Ga0310901_105073061	3300031940	Soil	IALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVG
Ga0310906_113724081	3300032013	Soil	VYVCAAGSGKNRTIAAIALEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0310896_100275872	3300032211	Soil	VIALEDKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVMRVRVGP
Ga0310896_104649351	3300032211	Soil	LEVASIPTGAVYVCAAGSGKDRTIAAIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAADGSEVTQADEAEYDKKVIRVRVGP
Ga0335083_111482761	3300032954	Soil	VAGLCRRHTEMGPCQYARNACRSSGGRVYAADGSEITQADEAEYDKKVMRMKVGP
Ga0316601_1012051321	3300033419	Soil	ATIELEEKVAALCRRHTEMGPCQNARNACRRSGGRVYAPDGSEITQADEAEYDKKVMRVRVGP
Ga0370493_0228442_202_477	3300034129	Untreated Peat Soil	MADKLDPSSIPVGAVYVCAAGSGKDRKTATIELPEKVAALCRRHTEMGPCQNARNECRRSGGRVYAADGNEITLADEAAYDKKVTRVTVGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073694

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences