Metagenome Family F073685

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073685
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	101 residues
Representative Sequence	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGHNGS
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.17 %
% of genes near scaffold ends (potentially truncated)	34.17 %
% of genes from short scaffolds (< 2000 bps)	85.00 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.500 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.05% β-sheet: 0.00% Coil/Unstructured: 30.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02075	RuvC	45.83
PF01709	Transcrip_reg	38.33
PF00072	Response_reg	0.83
PF07721	TPR_4	0.83
PF01168	Ala_racemase_N	0.83
PF13946	DUF4214	0.83
PF13431	TPR_17	0.83
PF11949	DUF3466	0.83
PF00005	ABC_tran	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	45.83
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	38.33

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	63.33 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	11.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	11.67 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.83 %
Brachyspirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	11.67 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.83 %
Brachyspiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	11.67 %
Candidatus Parcubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria	0.83 %
Brachyspira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	11.67 %
Brachyspira intermedia	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira → Brachyspira intermedia	0.83 %
unclassified Parcubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.33 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	11.67 %
Parcubacteria bacterium SCGC AAA036-E14	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Parcubacteria bacterium SCGC AAA036-E14	0.83 %
Brachyspira intermedia	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira → Brachyspira intermedia	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100668723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1515	Open in IMG/M
3300000559\|F14TC_107179538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300000789\|JGI1027J11758_12851988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300000886\|AL3A1W_1108858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300003228\|JGI26300J46817_100036	All Organisms → cellular organisms → Bacteria → Acidobacteria	3120	Open in IMG/M
3300004633\|Ga0066395_10684997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005171\|Ga0066677_10767426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005175\|Ga0066673_10783961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005178\|Ga0066688_10302376	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005181\|Ga0066678_10256711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300005332\|Ga0066388_100029749	All Organisms → cellular organisms → Bacteria	5090	Open in IMG/M
3300005338\|Ga0068868_100761108	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005353\|Ga0070669_100848431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300005364\|Ga0070673_100206082	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300005438\|Ga0070701_11314979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005441\|Ga0070700_101140677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005447\|Ga0066689_10006695	All Organisms → cellular organisms → Bacteria	4964	Open in IMG/M
3300005451\|Ga0066681_10235255	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300005459\|Ga0068867_100372797	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300005544\|Ga0070686_100900576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300005549\|Ga0070704_101705405	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Brachyspirales → Brachyspiraceae → Brachyspira → Brachyspira intermedia	582	Open in IMG/M
3300005559\|Ga0066700_10638321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300005560\|Ga0066670_10028509	All Organisms → cellular organisms → Bacteria → Acidobacteria	2700	Open in IMG/M
3300005560\|Ga0066670_10249799	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005561\|Ga0066699_10022564	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300005569\|Ga0066705_10046354	All Organisms → cellular organisms → Bacteria	2422	Open in IMG/M
3300005598\|Ga0066706_10313445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300005617\|Ga0068859_101070554	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005719\|Ga0068861_100130429	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300005843\|Ga0068860_101780194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300006049\|Ga0075417_10181727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300006058\|Ga0075432_10427177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300006237\|Ga0097621_101191861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300006358\|Ga0068871_101673416	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006794\|Ga0066658_10115302	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300006796\|Ga0066665_10350944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300006800\|Ga0066660_10759327	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006800\|Ga0066660_11656466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006854\|Ga0075425_100000089	All Organisms → cellular organisms → Bacteria	77600	Open in IMG/M
3300006871\|Ga0075434_100252180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1784	Open in IMG/M
3300006871\|Ga0075434_101924517	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Parcubacteria bacterium SCGC AAA036-E14	597	Open in IMG/M
3300006876\|Ga0079217_10044258	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300006876\|Ga0079217_10382736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300009012\|Ga0066710_100017093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	7809	Open in IMG/M
3300009012\|Ga0066710_101474595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300009012\|Ga0066710_103010058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300009090\|Ga0099827_11048299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300009147\|Ga0114129_10097491	All Organisms → cellular organisms → Bacteria → Acidobacteria	4070	Open in IMG/M
3300009147\|Ga0114129_12094216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300009147\|Ga0114129_12853534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300009148\|Ga0105243_11262505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300009148\|Ga0105243_11792532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300009176\|Ga0105242_10000853	All Organisms → cellular organisms → Bacteria	23628	Open in IMG/M
3300009176\|Ga0105242_10530377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300009176\|Ga0105242_13259899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300009177\|Ga0105248_10919270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300009545\|Ga0105237_11410445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300009551\|Ga0105238_11872745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300010046\|Ga0126384_12256410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300010047\|Ga0126382_10062515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2243	Open in IMG/M
3300010047\|Ga0126382_11352882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300010335\|Ga0134063_10332788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300010362\|Ga0126377_13413243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010375\|Ga0105239_11842024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300010375\|Ga0105239_13583602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300010397\|Ga0134124_11129315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	801	Open in IMG/M
3300010397\|Ga0134124_11700359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300010399\|Ga0134127_11607736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300010399\|Ga0134127_12006901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300010400\|Ga0134122_10312510	All Organisms → cellular organisms → Bacteria → Acidobacteria	1353	Open in IMG/M
3300010401\|Ga0134121_10616442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1017	Open in IMG/M
3300011119\|Ga0105246_10443271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300012202\|Ga0137363_11778077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300012205\|Ga0137362_11196413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300012208\|Ga0137376_11409061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012212\|Ga0150985_100415984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300012350\|Ga0137372_10366393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300012353\|Ga0137367_10744289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012469\|Ga0150984_113423388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	938	Open in IMG/M
3300012929\|Ga0137404_11214617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300012930\|Ga0137407_12275905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012948\|Ga0126375_10361249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1034	Open in IMG/M
3300012958\|Ga0164299_10480305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300012960\|Ga0164301_11807721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012961\|Ga0164302_11669261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300012975\|Ga0134110_10209044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300013297\|Ga0157378_10066330	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300013297\|Ga0157378_10616403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1098	Open in IMG/M
3300013306\|Ga0163162_10035894	All Organisms → cellular organisms → Bacteria → Acidobacteria	4939	Open in IMG/M
3300013308\|Ga0157375_10992409	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	980	Open in IMG/M
3300013308\|Ga0157375_12008901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300014325\|Ga0163163_12641286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300014968\|Ga0157379_11199204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300015085\|Ga0167632_1000446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	7373	Open in IMG/M
3300015168\|Ga0167631_1001726	All Organisms → cellular organisms → Bacteria → Acidobacteria	3141	Open in IMG/M
3300015374\|Ga0132255_105369965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300017792\|Ga0163161_10412929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300018429\|Ga0190272_10647007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300018431\|Ga0066655_10176280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300018476\|Ga0190274_10839269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300024317\|Ga0247660_1002316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2649	Open in IMG/M
3300025918\|Ga0207662_10273837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300025923\|Ga0207681_10837501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300025934\|Ga0207686_10000017	All Organisms → cellular organisms → Bacteria	195143	Open in IMG/M
3300025939\|Ga0207665_10675025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	811	Open in IMG/M
3300025941\|Ga0207711_12081922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300025960\|Ga0207651_10495184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1056	Open in IMG/M
3300025981\|Ga0207640_12065893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300026023\|Ga0207677_11786599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300026035\|Ga0207703_10165231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1941	Open in IMG/M
3300026075\|Ga0207708_10931435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300026095\|Ga0207676_10440074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1227	Open in IMG/M
3300026118\|Ga0207675_100653132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1058	Open in IMG/M
3300026325\|Ga0209152_10424513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300026331\|Ga0209267_1185501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	815	Open in IMG/M
3300026523\|Ga0209808_1296840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300026538\|Ga0209056_10220679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1369	Open in IMG/M
3300026552\|Ga0209577_10480349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300027873\|Ga0209814_10163209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	957	Open in IMG/M
3300032180\|Ga0307471_102267894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.17%
Host-Associated	Host-Associated	40.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.17%
Plants	Host-Associated → Plants	40.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.67%
Roots	Host-Associated → Plants → Roots	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.50%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.17%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.50%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300003228	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006687233	3300000364	Soil	KSVAESNENLIGFIASTVETLRQDLTIVRSEMVTKQAFEAAVTALRADIEQVHLRLDTMDHNNASRFEHVEGEISRLRSAVYLLGKDRPEILRLLGQNS*
F14TC_1071795382	3300000559	Soil	MTEHNNDLIGFIASTVETLRDQATAMRDDMTAMRREMVTSDTFDAAIVSVRGDIEQVQMRLDGIEHSVNSRFEHVEGELSRLRSAIYLLGKDRPEVLRLLGQTSS*
JGI1027J11758_128519881	3300000789	Soil	MRLVSESNNNNVIGFIASTVEKLRDELAEMRRQMVTRDTFDAAIISVRGDIEQVQLRLDGIEHSMSSRFEHVEGELSRLRRAVYLLGKDRPEVLRLLGQTSA*
AL3A1W_11088582	3300000886	Permafrost	MLASELVSESNDNLIGFIASTVETIRDEVTTIRGEMVTKTVFEARTTAIRGDIEQVQVRFDSIEHGMSSKFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQDNA*
JGI26300J46817_1000363	3300003228	Soil	LAESNDNLIGFIASSVETINDRLNGIEERMATKTQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGHNGS*
Ga0066395_106849972	3300004633	Tropical Forest Soil	LTKVITSKSLAESNDNLIGFIASSVETINDRLSGIEERMATKADINRLDVGVIAIRADIEQIHLRLDTMDHTIASRFEHVEGEISRLRSAVYLLGKDRPEILRLLGHDVS*
Ga0066677_107674262	3300005171	Soil	MAESNNNELIGFIATTVETIRDRVDGIEVRMATKSDINRLEIATTAIRGDIEQVQLRFDGMEHSITSRFEHVEGELSRLRSAVYLLSKDR
Ga0066673_107839611	3300005175	Soil	MAESNNNEVIGFIASSVETLRNDIGLIRAEMVTKSAFDAAITAVRGDIEQVHLRLDSVEHSLTSRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG*
Ga0066688_103023762	3300005178	Soil	MWCITPVTGESNQNNLIGFIASTVETMRDDMTTMRSEMVTKSMFDAAITTVRGDIEQVQLRLDTMEHSVASRFEQVEGEISRLRSAVYLLGKDRPEILRLLGQTTS*
Ga0066678_102567112	3300005181	Soil	MWCITPVIGESNDKNLIGFIASTVETMRDDMTTMREQMATKADITVIRGDIEQVQLRLDSIDHSIASRFEHVEGELSRLRSAVYLLGKDRPEILRLLGQTTS*
Ga0066388_1000297494	3300005332	Tropical Forest Soil	MEGASMRAITEANNNKVIGFIASTVEKLRDDVGTMREQMATKDDITVLRGDIEQVQLRLDGIEHSMNSRFEYVEGEISRLRSAVYLLGKDRPEVLRLLGTT*
Ga0068868_1007611082	3300005338	Miscanthus Rhizosphere	VITSESLAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGHNGS*
Ga0070669_1008484312	3300005353	Switchgrass Rhizosphere	SKSVAESNNNEMIGFIASTVETISDRLNGIDERLNGIEERMATKAQLEATTIAIRGDIEQIHLQLDTTEHSVSSRFEHVETELSRLRSAVYLLGKDRPEILRLLGHNGS*
Ga0070673_1002060823	3300005364	Switchgrass Rhizosphere	VITSESLAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0070701_113149791	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0070700_1011406772	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEAATTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYLLGKDRPEILRLPGQNAS*
Ga0066689_100066953	3300005447	Soil	MWCITPVIGESNDKNLIGFIASTVKTMRDDMTRMREQMATKADSTVIRRDSGQVQLPLDSIDHSIASRFEHVEGELSRLRSAVYLLGKDRPEILRLLGQTSS*
Ga0066681_102352552	3300005451	Soil	MAESNNNEVIGFIASSVETLRNDIGLIRAEMVTKSAFDAAITAVRGDIEQLHLRLDSMEHSLTSRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG*
Ga0068867_1003727972	3300005459	Miscanthus Rhizosphere	MRLVTESNNNNVIGFIASTVESLRDDVASMRQEMATKSDVTILRGDIEQVQLRLDTIEHSMSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQTSA*
Ga0070686_1009005762	3300005544	Switchgrass Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVFVLGKDRPDILRLLGHNGS*
Ga0070704_1017054051	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VKPTWRRRETAEGACKLFALTKVITSESLAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0066700_106383212	3300005559	Soil	VSESNDNLIGFIASTVETIRDEVTTIRGEMVTKTTFEATTTAMRGDIEQVQLRLDSIEHGMSSRFEHVEGEVSRLRSAVYLLGKDRPEVLRLLGQAGV*
Ga0066670_100285093	3300005560	Soil	MAESNNNEVIGFIASSVETLRNDIGLIRAEMVTKSAFDAAITAVRGDIEQVHLRLDSVEHSLTSRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNG
Ga0066670_102497992	3300005560	Soil	MANSDNNEMIGFIASTVETIRDRLDGIDERMDGMVTKSMFDAGITAVRGDIEQVHMRLDSMEHSLTSRFEHVEGELSRLRSAVYMLSKDRPEVLRLLGHNGG*
Ga0066699_100225645	3300005561	Soil	MLTKVLASKLVAESNNDNLIGFIASTVETIRDEVTTIRGEMVTKTTFEATTIAIRGDIEQVHLRLESIEHGMSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQAGA*
Ga0066705_100463543	3300005569	Soil	MAESNNNEVIGFIASSVETLRNDIGLIRAEMVTKSAFDAAITAVRGDIEQVHLRLDSVEHSLASRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG*
Ga0066706_103134451	3300005598	Soil	LIGFIASTVETMRDDMTTMRSEMVTKSMFDAAITTVRGDIEQVQLRLDTMEHSVASRFEQVEGEISRLRSAVYLLGKDRPEILRLLGQTTS*
Ga0068859_1010705541	3300005617	Switchgrass Rhizosphere	VITSESLAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVFVLGKDRPDILRLLGHNGS*
Ga0068861_1001304293	3300005719	Switchgrass Rhizosphere	VITSESLAESNDNLIGFIASSVETITDHLNGIEERMATKAHLESATTAIRGDIEQVHLRLNTMEHSVSSRFELVETELSRLRSAVYLLGKDRPEILRLLGHNGS*
Ga0068860_1017801942	3300005843	Switchgrass Rhizosphere	ESNDNLIGFIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0075417_101817272	3300006049	Populus Rhizosphere	MLRSLPTVAESNNNEVIGCIASAVKTLRDDVASMRSKMVTRGGFDVAITAVRGDIEQVQLRFDSMEHSISSRFEQVEGELSRLRSAVYLLGK
Ga0075432_104271772	3300006058	Populus Rhizosphere	ADNGGALMLRSLPTVAESNNNEVIGCIASAVKTLRDDVASMRSKMVTRGGFDVAITAVRGDIEQVQLRLDSMEHSIASRFEQVEGELSRLRSAVYLLGKDRPDVLRMLGQTSS*
Ga0097621_1011918612	3300006237	Miscanthus Rhizosphere	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEGAITAVRGDIEQVHLRLSTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHN
Ga0068871_1016734161	3300006358	Miscanthus Rhizosphere	MRPMTESNNNNVIGFIASTVETMRDDIASMRQEIATKTDVTILRGDIEQVQLRLDTIEHSMSSRFEHVEGEISRLRSAVYLLGKDRP
Ga0066658_101153022	3300006794	Soil	MKVELTQVIASESVSESNDNLIGFIASTVEKLSDSVATMRDEMVTKNTFEAGITAVRGDIEQVQLRLDSIEHGVSSRFEHVEGEISRLRSAVYLLGKDRPEVLRLLGQAGT*
Ga0066665_103509442	3300006796	Soil	MLTKVLASKLVSESNDNLIGFIASTVETIRDEVTTIRGEMVTKTTFEATTTAMRGDIEQVQLRLDSIEHGMSSRFEHVEGELSRLRRAVYLLGKDRPEVLRLLGQAGA*
Ga0066660_107593272	3300006800	Soil	MPESNNNEVIGFIASTVEIIRDRLDGIDERMDGMATKKHLEVATTAIRGDIEQVHLRLNTMEHSLSSRFEQVEGEISRLRSAVYLLGKDRPDVLRMLGQTSS*
Ga0066660_116564661	3300006800	Soil	MAESNNNELIGFIATTVETIRDRVDGIEVRMATKSDINRLEIATTAIRGDIEQVQLRFDGMEHSITSRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG*
Ga0075425_10000008953	3300006854	Populus Rhizosphere	VIASESVSESNDNLIGFIASTVEKLSDDVGTMRQQMVTKDAFEAGITSVRGDIERVQLRLDGIEHDVSSKFEHVEGELSRLRGAVYLLGKDRPEVLRLLGQTSA*
Ga0075434_1002521803	3300006871	Populus Rhizosphere	VIRSESLAESNDNLIGFIASSVEKLRDDVTSICAEMVTKRAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRGAVYLLGKDRPEILRLLGHNGS*
Ga0075434_1019245171	3300006871	Populus Rhizosphere	MKVELTKVIASESVSESNDNLIGFIASTVEKLSDDVGTMRQQMVTKDAFEAGITSVRGDIERVQLRLDGIEHDVSSKFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQTSA*
Ga0079217_100442582	3300006876	Agricultural Soil	MLRSSPTVAESNNNEVIGFIASTVETMRNDMASMRDVMVTKDSFDAAVTAVSGEIEQVQLRLDSMEHSVASRFENVEGQISRLRSAVYLLGKDDPDVLRLLGHKNS*
Ga0079217_103827361	3300006876	Agricultural Soil	MLRSSPTVAESNNNEVIGFIASTVETMRNDMASMRAVMVTKDSFDAAITAVRGDIEQVQLRLDSMEHSVASRFELVEGQISRLRSAVYL
Ga0066710_1000170935	3300009012	Grasslands Soil	MWCITPVIGESNDKNLIGFIASTVETMRDDMTTMREQMATKADITVIRGDIEQVQLRLDSIDHSIASRFEHVEGELSRLRSAVYLLGKDRPEILRLLGQTTS
Ga0066710_1014745952	3300009012	Grasslands Soil	VLASKLVSESNDNLIGFIASTVETIRDEVTTIRGEMVTKTTFEATTTAMRGEIEQVQLRLDSIEHGVSSRFEHVEGEISRLRSAVYLLGKDRPEVLRLLGQSST
Ga0066710_1030100582	3300009012	Grasslands Soil	MAESNNNEVIGFIASSVETLRNDIGLIRAEMVTKSAFDAAFTAVRGDIEQVHLRLDSVEHSLASRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG
Ga0099827_110482992	3300009090	Vadose Zone Soil	GVRLLQARTLALQSHQTMLTKVLASKLVSESNDNLIGFIASTVETIRDEVTTIRGEMVTKTTFEATTTAMRGDIEQVQLRLDSIEHGMSSRFEHVAGELSRLRSAVYLLGKDRPEVLRLLGQAGA*
Ga0114129_100974912	3300009147	Populus Rhizosphere	MLGSLPTVAESNNNEVIGFIASTVETLRDDVASMHSEMVTRGGFDVAITAVRGDIEQVQLRFDSMEHSIASRFEQVEGEISRLRSAVCLPGKDRPDGLRMLGQTSS*
Ga0114129_120942162	3300009147	Populus Rhizosphere	MLRSSPTVAESNNNEVIGFIASTVETLRDDVASMRSEMVTRAAFDVAITAVRGDIEQVQLRLDSMEHSIASRFEQVEGELSRLRSAVYLLGKDRPDVLRMLGQTSS*
Ga0114129_128535342	3300009147	Populus Rhizosphere	MLRSLPTVAESNNNEVIGCIASAVKTLRDDVASMRSKMVTRGGFDVAITAVRGDIEQVQLRFDSMEHSISSRFEQVEGEISRLRSAVYLPGKDRPDVLRMFG*
Ga0105243_112625051	3300009148	Miscanthus Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEAATTAIRGDIEQVHLRLNTMEHSVSSRFEQMETELSRLRSAVYLLGKDRPEILRLLGQNAS*
Ga0105243_117925322	3300009148	Miscanthus Rhizosphere	INDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0105242_1000085316	3300009176	Miscanthus Rhizosphere	VEKLRDDVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVFVLGKDRPDILRLLGHNGS*
Ga0105242_105303772	3300009176	Miscanthus Rhizosphere	VKPTWRRRETAEGACKLFALTKVITSESLAESNDNLIGFIASSVETITDHLNGIEERMATKAHLESATTAIRGDIEQVHLRLNTMEHSVSSRFELVETELSRLRSAVYLLGKDRPEILRLLGHNGS*
Ga0105242_132598992	3300009176	Miscanthus Rhizosphere	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0105248_109192701	3300009177	Switchgrass Rhizosphere	KVITSESLAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEVAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0105237_114104452	3300009545	Corn Rhizosphere	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFENAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKD
Ga0105238_118727451	3300009551	Corn Rhizosphere	LAESNDNLIGFIASSVEKLRDDVTSIRAEIVTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHN
Ga0126384_122564102	3300010046	Tropical Forest Soil	MRAMTESNNNKVIGFIASTVEKLRDDVTTIREEMATKADVTILRGDIEQVQLRLDGLEHSVSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQNRA*
Ga0126382_100625152	3300010047	Tropical Forest Soil	MRLVTESNNNSVIGFIASAVETLRNELTAMRSQMVTRDTFDAAIVALRGDIEQVQLRLDGIEHSMSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQGSTS*
Ga0126382_113528822	3300010047	Tropical Forest Soil	MLRRSGFQNSDRIGSMADGESNNVIGFIAGTVETIRNEVSTIRSEMVTKNTFEATTTAIRGDIEQVQLRLDAMEHVMASKFEQVEGELSRLRSAVYVLGKDRPDVLRLLGQSNP*
Ga0134063_103327881	3300010335	Grasslands Soil	MAESNNNEVIGFIASSVETLRNDIGLIRAEMVTKSAFDAAITAVRGDIEQVHLRLDSVEHSLTSRFEHVEGELSRLRSAVYLLGKDRPEILRLLGHNGG*
Ga0126377_134132431	3300010362	Tropical Forest Soil	RERWTDSMRLVTESNNNSVIGFIASTVETLRNELTAMRSQMVTRDTFDAAIVALRGDIEQVQLRLDGIEHSMSSRFEHVEGELSRLRSAVYLLGKDRPEILRLLGPSVA*
Ga0105239_118420241	3300010375	Corn Rhizosphere	STVETISDRLNGIDERLNGIEERMATKAQLEATTIAIRGDIEQIHLRLDTTEHSVSSRFEHVETELSRLRSAVYLLGKDRPEILRLLGHNGS*
Ga0105239_135836021	3300010375	Corn Rhizosphere	NLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGHNGS*
Ga0134124_111293152	3300010397	Terrestrial Soil	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSVFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYLLGKDRPEILRLLGQNVS*
Ga0134124_117003591	3300010397	Terrestrial Soil	RQPEIGSGTCKSFALTKVITSESLAESNDSLIGFIASSVETINDRLNGIEERMATKTQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGSPDFHNCPFMIC*
Ga0134127_116077361	3300010399	Terrestrial Soil	MIGFIASTVETISDRLNGIEERLNGIEERMATKAQLEATTIAIRGDIEQIHLRLDTTEHSVSSRFEHVETELSRLRSAVYLLGKDRPEILRLLGHNGS*
Ga0134127_120069012	3300010399	Terrestrial Soil	LAESNDNLIGFIASSVETISDRLNGIEERMATKAQLEAATTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYLLGKDRPDVLRLLGRNGS*
Ga0134122_103125102	3300010400	Terrestrial Soil	SGTCKTFALTRVITSESLAESNDNLIGFIASSVETINDCLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRGAVYLLGKDRPDVLRLLGRNGS*
Ga0134121_106164422	3300010401	Terrestrial Soil	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGHNGS*
Ga0105246_104432712	3300011119	Miscanthus Rhizosphere	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEVAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVFVLGKDRPDILRLLGHNRS*
Ga0137363_117780771	3300012202	Vadose Zone Soil	KSMSESNDNLIGFIASTVETIRHEVTTIRGEMVTKTTFEATTTAIRGDIEQVQLRLNSIEHGMSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQAGT*
Ga0137362_111964132	3300012205	Vadose Zone Soil	MKVELTQVIASESVSESNDNLIAFIASTVEKLSDDVATMRDEMVTKNAFEAGITAVRGDIEQVQLRLDGIEHDMSSEFEHFEGELSRLRSAVYLLGKDRPEVLRLLGQTNAWSSLKHI*
Ga0137376_114090612	3300012208	Vadose Zone Soil	SVAGSNDNLIGFIASTVETIRDEVTTIRGEMVTKTTFEATTIAIRGDIEQVQLRLDSIEHGVSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQDSV*
Ga0150985_1004159841	3300012212	Avena Fatua Rhizosphere	SLAESNDNLIGFIASSVEKLRDDVASIGAEMVTKSAFDAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0137372_103663931	3300012350	Vadose Zone Soil	MKVELTQVITSESVSESNDNLIGFIASTVEKLSDDVATMRDEMVTKNAFEAGITAVRGDIEQVQLRLDGIEHDVSSKFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQTSA*
Ga0137367_107442892	3300012353	Vadose Zone Soil	MANSDNNEMIGFIASTVETLRSDLTAVRSQMVTKDSFDVAITAVRGDIEQVHLRLDSMEHGLASRFEHVEGELSRLRSAVYLLGKDRPEILRLLGHNDG*
Ga0150984_1134233882	3300012469	Avena Fatua Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEAATTAVRGDIEQVHLRLNTMEYSVSSRVEQVETELSRLRSAVYFLGKDRPEILRLLGQNSS*
Ga0137404_112146172	3300012929	Vadose Zone Soil	IGFIASTVETIREEVTTIRGEMVTKATFEATTTAIRGDIEQVQLRLDSIEHGVSSRFEHVEGEISRLRSAVYLLGKDRPEVLRLLGQAGT*
Ga0137407_122759051	3300012930	Vadose Zone Soil	VSESNDNLIGFIASTVETIREEATTIRDEMVTKATFEATTTAIRGDIEQVQLRLDIIEHGVSSRFEHVEGEISRLRSAVYLLGKDRPEVLRLLGQAST*
Ga0126375_103612492	3300012948	Tropical Forest Soil	MLRRSGFQNSDSIGSMADGESNNVIGFIAGTVETIRNEVSTIRSEMVTKNTFETTTTAIRGDIEQVQLRLDTMEHVMASKFEQVEGELSRLRSAVYVLGKDRPDVLRLLGQSNP*
Ga0164299_104803052	3300012958	Soil	FIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGHNGS*
Ga0164301_118077211	3300012960	Soil	SESLAESNDNLIGFIASSVEKLRDDVASIRAEMVTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLSKDRPEILRLLGHNGS*
Ga0164302_116692612	3300012961	Soil	LAESNDNLIGFIASSVEKLRDEVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGRNGS*
Ga0134110_102090442	3300012975	Grasslands Soil	IASSVETLRNDIGLIRAEMVTKSAFDAAITAVRGDIEQVHLRLDSVEHSLTSRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG*
Ga0157378_100663302	3300013297	Miscanthus Rhizosphere	MIGFIASTVETISDRLNGIDERLNGIEERMATKAQLEATTIAIRGDIEQTHLRLDTTEHSVSSRFEHVETELSRLRSAVYLLGKDRPEILRLLGHNGS*
Ga0157378_106164032	3300013297	Miscanthus Rhizosphere	LAESNDNLIGFIASGVETINDRLSGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVPGKDRPDILRLLGHNGS*
Ga0163162_100358943	3300013306	Switchgrass Rhizosphere	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0157375_109924092	3300013308	Miscanthus Rhizosphere	LAESNDNLIGFIASSVETISDRLNGIGERMATLATKAQLAAATTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS*
Ga0157375_120089011	3300013308	Miscanthus Rhizosphere	LAESNDNLIGFIAISVEKLRDDVTSIRAEMLTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYLLGKDRPEILRLLGQNAS
Ga0163163_126412861	3300014325	Switchgrass Rhizosphere	LAESNDNLLGFIASSVETISDCLNGIEERMATRAQLEAATTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS
Ga0157379_111992041	3300014968	Switchgrass Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILR
Ga0167632_10004465	3300015085	Glacier Forefield Soil	MLASELVSESNDNLIGFIASTVEPIRDEVTTIRGEMVTKTVFEATTTAIRGDIEQVQVRFDSIEHGMSSRFEHVEGELSRLRSAVYLPGKDRPEVLRLLGQDNA*
Ga0167631_10017263	3300015168	Glacier Forefield Soil	MLASELVSESNDNLIGFIASTVETIRDEVTTIRGEMVTKTVFEATTTAIRGDIEQVQVRFDSIEHGMSSKFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQDNA*
Ga0132255_1053699651	3300015374	Arabidopsis Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPEILRLLGHNGS*
Ga0163161_104129292	3300017792	Switchgrass Rhizosphere	MIGFIASTVETISDRLNGIDERLNGIEERMATKAQLEATTIAIRGDIEQTHLRLDTTEHSVSSRFEHVETELSRLRSAVYLLGKDRPEILRLLG
Ga0190272_106470072	3300018429	Soil	MLPLSEQVAESNNNEVIGFIASTVETMRNDMASMRDVMVTKDSFDAAVTAVRGDIEQIHLRLDSLDHRISSRDEHFDAEISRLRSAVYVLG
Ga0066655_101762802	3300018431	Grasslands Soil	MWCITPVIGESNDKNLIGFIASTVETMRDDMTTMREQMATKAGITVIRGDIEQVQLRLDSIDHSIASRFEHVEGELSRLRSAVYLLGKDRPEILRLLGQTTS
Ga0190274_108392692	3300018476	Soil	ATTVERLRDDIALMRQEMATKTDVTILRGEIEQVQLRLDTIEHSMSSRFEHVEGEISRLRSAVYLLGKDRPEVLRLLGQSSAG
Ga0247660_10023162	3300024317	Soil	MRLVSESNNNNVIGFIASTVEKLRDELAEMRRQMVTRDTFDAAIISVRGDIEQVQLRLDGIEHSMSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQTSA
Ga0207662_102738372	3300025918	Switchgrass Rhizosphere	LAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDIL
Ga0207681_108375012	3300025923	Switchgrass Rhizosphere	SKSVAESNNNEMIGFIASTVETISDRLNGIDERLNGIEERMATKAQLEATTIAIRGDIEQIHLQLDTTEHSVSSRFEHVETELSRLRSAVYLLGKDRPEILRLLGHNGS
Ga0207686_1000001789	3300025934	Miscanthus Rhizosphere	MRLVTESNNNNVIGFIASTVESLRDDVASMRQEMATKSDVTILRGDIEQVQLRLDTIEHSMSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQTSA
Ga0207665_106750252	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VITSESVSESNDNLIGFIASTVEKLSDDVATMRQEMVTKNAFEAGITSVRGDIERVQLRLDGIEHDVSSKFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQTSA
Ga0207711_120819221	3300025941	Switchgrass Rhizosphere	AKPTWPRRDVGHCKLFSLTKVITSKSLAESNDNLIGFIASSVETINDRLNGIEGRMATKAQLEAATTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYLLGKDRPEILRLLGQSSS
Ga0207651_104951842	3300025960	Switchgrass Rhizosphere	VITSESLAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS
Ga0207640_120658931	3300025981	Corn Rhizosphere	VEKLRDDVTSIRAEMVTKSAFEVAITAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS
Ga0207677_117865991	3300026023	Miscanthus Rhizosphere	VITSESLAESNDNLIGFIASSVEKLRDDVTSIRAEMVTKSAFEAAITAVRGDIEQVHLRLNTMEHSVSSRFEHVETELSRLRSAVYLLGKDRPEILRLLGHNGS
Ga0207703_101652313	3300026035	Switchgrass Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEATTTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYVLGKDRPDILRLLGHNGS
Ga0207708_109314352	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LAESNDNLIGFIASSVETINDRLNGIEERMATKAQLEAATTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRSAVYLL
Ga0207676_104400742	3300026095	Switchgrass Rhizosphere	VITSESLAESNDNLLGFIASSVETISDCLNGIEERMATRAQLEAATTAIRGDIEQVHLRLNTMEHSVSSRFEQVETELSRLRGAVYLLGKDRPDVLRLLGHNGS
Ga0207675_1006531322	3300026118	Switchgrass Rhizosphere	VKPTWRRRETAEGACKLFALTKVITSESLAESNDNLIGFIASSVETITDHLNGIEERMATKAHLESATTAIRGDIEQVHLRLNTMEHSVSSRFELVETELSRLRSAVYLLGKDRPEILRLLGHNGS
Ga0209152_104245132	3300026325	Soil	VIASESVSESNDNLIGFIASTVEKLSDSVATMRDEMVTKNTFEAGITAVRGDIEQVQLRLDSIEHGVSSRFEHVEGEISRLRSAVYLLGKDRPEVLRLLGQSST
Ga0209267_11855012	3300026331	Soil	MWCITPVTGESNQNNLIGFIASTVETMRDDMTTMRSEMVTKSMFDAAITTVRGDIEQVQLRLDTMEHSVASRFEQVEGEISRLRSAVYLLGKDRPEILRLLGQTTS
Ga0209808_12968402	3300026523	Soil	MAESNNNEVIGFIASSVETLRNDIGLIRAEMVTKSAFDAAITAVRGDIEQVHLRLDSVEHSLTSRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG
Ga0209056_102206791	3300026538	Soil	MLTKVLASKLVSESNDNLIGFIASTVETIRDEVTTIRGEMVTKTTFEATTTAMRGDIEQVQLRLDSIEHGMSSRFEHVEGELSRLRRAVYLLGKDRPEVLRLLGQAGA
Ga0209577_104803492	3300026552	Soil	MAESNNDELIGFIATTVETIRDRVDGIEVRIATKSDINRLEIATTAIRGDIEQVQLRFDGMEHSITSRFEHVEGELSRLRSAVYLLSKDRPEVLRLLGHNGG
Ga0209814_101632092	3300027873	Populus Rhizosphere	MLRSLPTVAESNNNEVIGCIASAVKTLRDDVASMRSKMVTRGGFDVAITAVRGDIEQVQLRFDSMEHSISSRFEQVEGEISRLRSAVYLLGKDRPDVLRMLGQTSS
Ga0307471_1022678942	3300032180	Hardwood Forest Soil	MRLVTESNNNNVIGFIASTVERLRDDVGSMRQEMATKSDVTILRGDIEQVQLRLDTIEHSMSSRFEHVEGELSRLRSAVYLLGKDRPEVLRLLGQTSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences