Metagenome Family F073618

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073618
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	58 residues
Representative Sequence	VKPEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDE
Number of Associated Samples	91
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.94 %
% of genes near scaffold ends (potentially truncated)	36.67 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (13.333 % of family members)
Environment Ontology (ENVO)	Unclassified (36.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.82% β-sheet: 27.27% Coil/Unstructured: 65.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00005	ABC_tran	46.67
PF03358	FMN_red	36.67
PF00664	ABC_membrane	7.50
PF01594	AI-2E_transport	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.17 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.67 %
Unclassified	root	N/A	4.17 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.67 %
Unclassified	root	N/A	4.17 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	21.67 %
Unclassified	root	N/A	4.17 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.67 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.67 %
Unclassified	root	N/A	4.17 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.83 %
Pseudanabaenaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.67 %
Unclassified	root	N/A	4.17 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.83 %
Pseudanabaena	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.67 %
Unclassified	root	N/A	4.17 %
unclassified Pseudanabaena	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → unclassified Pseudanabaena	0.83 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.67 %
Unclassified	root	N/A	4.17 %
Pseudanabaena sp. PCC 6802	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → unclassified Pseudanabaena → Pseudanabaena sp. PCC 6802	0.83 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0787507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300000891\|JGI10214J12806_11900045	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300003324\|soilH2_10086442	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300003996\|Ga0055467_10057334	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300004013\|Ga0055465_10072216	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300004013\|Ga0055465_10277891	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300004114\|Ga0062593_100159265	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300004114\|Ga0062593_100202127	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300004114\|Ga0062593_101680485	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300004114\|Ga0062593_102786132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → unclassified Pseudanabaena → Pseudanabaena sp. PCC 6802	558	Open in IMG/M
3300004157\|Ga0062590_100014390	All Organisms → cellular organisms → Bacteria	3472	Open in IMG/M
3300004157\|Ga0062590_102187468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300004643\|Ga0062591_102520562	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005332\|Ga0066388_100497352	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300005332\|Ga0066388_100830970	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300005332\|Ga0066388_107908865	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005332\|Ga0066388_108655811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300005334\|Ga0068869_100947753	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005338\|Ga0068868_100629094	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005345\|Ga0070692_10945935	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005345\|Ga0070692_11014568	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005355\|Ga0070671_101100384	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005356\|Ga0070674_100064884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2561	Open in IMG/M
3300005356\|Ga0070674_100575947	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005364\|Ga0070673_100577238	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005441\|Ga0070700_101358566	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005456\|Ga0070678_101694904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300005457\|Ga0070662_101807874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300005459\|Ga0068867_101991883	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005543\|Ga0070672_100439232	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1123	Open in IMG/M
3300005543\|Ga0070672_100550989	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300005544\|Ga0070686_100171707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1534	Open in IMG/M
3300005564\|Ga0070664_100775379	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005577\|Ga0068857_100397117	Not Available	1283	Open in IMG/M
3300005718\|Ga0068866_10239208	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300005718\|Ga0068866_11008661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005842\|Ga0068858_101970154	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005844\|Ga0068862_101643821	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005873\|Ga0075287_1019028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300006358\|Ga0068871_100847123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300006880\|Ga0075429_100840511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300006881\|Ga0068865_100399118	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300006969\|Ga0075419_11342629	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009100\|Ga0075418_10238688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1935	Open in IMG/M
3300009100\|Ga0075418_12923361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300009100\|Ga0075418_13138197	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009147\|Ga0114129_10106795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3867	Open in IMG/M
3300009147\|Ga0114129_12361950	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009148\|Ga0105243_10094078	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300009148\|Ga0105243_10719397	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300009148\|Ga0105243_10782247	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300009162\|Ga0075423_12899043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300010362\|Ga0126377_13555314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300010401\|Ga0134121_12557409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300012901\|Ga0157288_10032412	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300012902\|Ga0157291_10085784	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012905\|Ga0157296_10035106	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300012907\|Ga0157283_10102224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300012912\|Ga0157306_10016148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1535	Open in IMG/M
3300012914\|Ga0157297_10101984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300013308\|Ga0157375_10018954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6247	Open in IMG/M
3300014325\|Ga0163163_10059099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3791	Open in IMG/M
3300015077\|Ga0173483_10848535	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300015200\|Ga0173480_10916803	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300015201\|Ga0173478_10482397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300015201\|Ga0173478_10838741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300015371\|Ga0132258_12280845	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300015372\|Ga0132256_101545968	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300015374\|Ga0132255_101966638	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300017965\|Ga0190266_10098442	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300019356\|Ga0173481_10052626	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300019361\|Ga0173482_10037568	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300019361\|Ga0173482_10069418	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300022737\|Ga0247747_1052997	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300022756\|Ga0222622_10637927	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300024055\|Ga0247794_10344904	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300025899\|Ga0207642_10090173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1512	Open in IMG/M
3300025899\|Ga0207642_10515288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300025899\|Ga0207642_11098250	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300025901\|Ga0207688_10006401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	6413	Open in IMG/M
3300025907\|Ga0207645_10132366	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300025908\|Ga0207643_10163464	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300025927\|Ga0207687_10130796	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300025933\|Ga0207706_11353138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300025934\|Ga0207686_10242947	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300025935\|Ga0207709_10568134	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300025940\|Ga0207691_10370120	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1224	Open in IMG/M
3300025944\|Ga0207661_11508835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300025961\|Ga0207712_11866514	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300025972\|Ga0207668_10088441	All Organisms → cellular organisms → Bacteria	2269	Open in IMG/M
3300026067\|Ga0207678_11029828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300026075\|Ga0207708_10986396	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300026095\|Ga0207676_11694824	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300026116\|Ga0207674_10350969	Not Available	1426	Open in IMG/M
3300026121\|Ga0207683_10494671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300027909\|Ga0209382_11197435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300027909\|Ga0209382_12316540	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300028380\|Ga0268265_11796832	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300028597\|Ga0247820_10134251	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300028608\|Ga0247819_10280280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300028809\|Ga0247824_10689207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300030336\|Ga0247826_10382913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300030336\|Ga0247826_10529328	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300031170\|Ga0307498_10004454	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300031740\|Ga0307468_101729770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300031854\|Ga0310904_10512963	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031854\|Ga0310904_10560876	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031858\|Ga0310892_10284928	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300031858\|Ga0310892_10457826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300031858\|Ga0310892_10567321	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031908\|Ga0310900_10786648	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300032000\|Ga0310903_10361189	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300032075\|Ga0310890_10128809	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300032075\|Ga0310890_10139453	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300032122\|Ga0310895_10257516	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300032180\|Ga0307471_103300979	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300032211\|Ga0310896_10314526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.33%
Host-Associated	Host-Associated	46.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	46.67%
Aquatic	Environmental → Aquatic	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.33%
Marine	Environmental → Aquatic → Marine	2.50%
Roots	Host-Associated → Plants → Roots	1.67%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.67%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.50%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.33%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.33%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07875072	2228664021	Soil	MRMTVVYCPRCGTRMNHQADKLVEPTSREEAEASTALGGVLIAVFACPNCGWI
JGI10214J12806_119000451	3300000891	Soil	PELACPRCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIASQRRSDDA*
soilH2_100864423	3300003324	Sugarcane Root And Bulk Soil	VKPELACPRCGTAMNHQADKLREPTTREEAETAPFGGVLIAVFACPNCGWIASESRVDDAQP*
Ga0055467_100573342	3300003996	Natural And Restored Wetlands	VKPEMTCPRCGAATNHQANKLREPATREEAETSPGGVVVVVFACPRCGWIAARPQRDDES
Ga0055465_100722161	3300004013	Natural And Restored Wetlands	RRRLVKPEMTCPRCGAATNHQANKLREPATREEAETSPGGVVVVVFACPRCGWIAARPQRDDES*
Ga0055465_102778912	3300004013	Natural And Restored Wetlands	VKPETCPRCGAAMNHQANKLREPTTREEAEASPGGVVVVVFACPRCGWIATRPPRDDES*
Ga0062593_1001592652	3300004114	Soil	VKPEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES*
Ga0062593_1002021273	3300004114	Soil	VKLEMTCPRCGTEMNHQADKLREPTTREEAESSRLGGIVIAVFACPRCGWIASRARDDDV
Ga0062593_1016804851	3300004114	Soil	VKPELSCPRCGTAMNHQADKLREPTSREEAESARFGGVLIAVLACPNCGWIASLLRGDDN
Ga0062593_1027861321	3300004114	Soil	MKPELACPRCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIASLRRSEDG
Ga0062590_1000143902	3300004157	Soil	MTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES*
Ga0062590_1021874682	3300004157	Soil	VKPEMACPHCGTAMNHQADKLREPTSREEAESARFAGVLVAVFACPNCGWIASVLRGDDD
Ga0062591_1025205621	3300004643	Soil	VKPELTCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPHDD
Ga0066388_1004973522	3300005332	Tropical Forest Soil	MKHEMTCPRCGHAMNFEAEKLREPMTREDAARSRSLGGVVTAVFACPNCGWIATRREDDQDD*
Ga0066388_1008309702	3300005332	Tropical Forest Soil	MSSTMTCPRCGSPMNHQADKLREPQTRDEAESSRALGGILIAVFACPQCGWIASQERPPDRH*
Ga0066388_1079088652	3300005332	Tropical Forest Soil	VKYELTCPRCGAAMNHEAEKLREPTTPEEARDGRALGGILIAVFACPNCGWIAARREDGEAG*
Ga0066388_1086558111	3300005332	Tropical Forest Soil	TCPRCGAAMNHEAEKLREPTTREEAREGGAVGGILIAVFACPNCGWIAARREDGEDG*
Ga0068869_1009477531	3300005334	Miscanthus Rhizosphere	MACPRCGAAMNHQADKLREPTTREEAETSPLGGIVIDVFACSNCGWIASRPRDDES*
Ga0068868_1006290942	3300005338	Miscanthus Rhizosphere	VKPAMACPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACSNCGWIASRPRDDES
Ga0070692_109459351	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VRPRARHHGRAGVKPELTCPRCGTAMNHQADKLREPTTREEAQSARFGGVLIAVFACPNCGRIESLPQPDDD*
Ga0070692_110145681	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VKPEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPGDDDES*
Ga0070671_1011003842	3300005355	Switchgrass Rhizosphere	NCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPHDD*
Ga0070674_1000648844	3300005356	Miscanthus Rhizosphere	VRPELSCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAQPRRDDD
Ga0070674_1005759472	3300005356	Miscanthus Rhizosphere	MRPEMTCPRCGASMNHQADKLREPTTREEAETSRPGGIVIAVFACPQCGWIAARPRDDES
Ga0070673_1005772382	3300005364	Switchgrass Rhizosphere	CGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDDD*
Ga0070700_1013585662	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VTPEMACPRCGAAMNHQADKLREPTTREEAETSRLGGIVIAVFACPSCGWIASRRRADDGS*
Ga0070678_1016949041	3300005456	Miscanthus Rhizosphere	VKPEMTCPHCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES*
Ga0070662_1018078741	3300005457	Corn Rhizosphere	CGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPGDDDES*
Ga0068867_1019918831	3300005459	Miscanthus Rhizosphere	PRCGAAMNHQADKLREPTTREEAETSRPGGIVIAVFACPQCGWIAARPRDDES*
Ga0070685_101032113	3300005466	Switchgrass Rhizosphere	MNHQATKLTEPTTRAEAEANAATGGILVLVFACPQCGWIGSRRAEPSET*
Ga0070672_1004392321	3300005543	Miscanthus Rhizosphere	PRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDDD*
Ga0070672_1005509892	3300005543	Miscanthus Rhizosphere	VKPEMTCPHCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPGDDDES*
Ga0070686_1001717072	3300005544	Switchgrass Rhizosphere	LSCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAEPRRDDD*
Ga0070664_1007753792	3300005564	Corn Rhizosphere	VKPQLSCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPHDD
Ga0068857_1003971172	3300005577	Corn Rhizosphere	CGTAMNHQADKLREPTSREEAESARFAGVLVAVFACPNCGWIASVLRGDDD*
Ga0068866_102392081	3300005718	Miscanthus Rhizosphere	VKPQLSCPRCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWI
Ga0068866_110086611	3300005718	Miscanthus Rhizosphere	MRPEMTCPRCGASMNHQADKLREPTTREEAETSRPGGIVIAVFACPQCGWIAAR
Ga0068858_1019701542	3300005842	Switchgrass Rhizosphere	VKPELTCPRCGTAMNHQADKLREPTTREEAQSARFGGVLIAVFACPNCGRIESLPQPDDD
Ga0068862_1016438211	3300005844	Switchgrass Rhizosphere	GTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPHDD*
Ga0075287_10190282	3300005873	Rice Paddy Soil	VKPEMTCPRCGAAMNHQANKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRDN
Ga0068871_1008471231	3300006358	Miscanthus Rhizosphere	VKPAMACPRCGAAMNHQADKLREPTMREEAETSPLGGIVIAVFACSNCGWIASRPRDDES
Ga0075429_1008405113	3300006880	Populus Rhizosphere	RTGVRPHMTCPKCGAEMNHQADKLREPTTREEAETSRLGGIVIAVFACPSCGWIASKPLREDS*
Ga0068865_1003991181	3300006881	Miscanthus Rhizosphere	VRPRARHHGRPGVKPQLSCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDDD*
Ga0075419_113426292	3300006969	Populus Rhizosphere	VRPHMTCPKCGAEMNHQADKLREPTTREEAETSRLGGIVIAVFACPSCGWIASKPLREDS
Ga0075418_102386882	3300009100	Populus Rhizosphere	MTCPKCGAEMNHQADKLREPTTQEEAETSRLGGVVIAVFACPSCGWIASKPLRDDS*
Ga0075418_129233611	3300009100	Populus Rhizosphere	MKPELACPKCGTAMNHHAKLREPTSREEAQSTRLRGVVIAVFACPNCGWIGSLRRPD
Ga0075418_131381972	3300009100	Populus Rhizosphere	KPELTCPRCGAPMNHQADKLREPVTREEAETSPLGGIVIAVFACPNCGWIASRRRDEES*
Ga0114129_101067955	3300009147	Populus Rhizosphere	MTCPKCGAEMNHQADKLREPTTREEAETSRLGGIVIAVFACPSCGWIASKPLREDS*
Ga0114129_123619502	3300009147	Populus Rhizosphere	VKPEMACPRCGAVMNHQADKLREPTTREEAETSRLGGIVIAVFACPNCGWIASRRREDDES*
Ga0105243_100940783	3300009148	Miscanthus Rhizosphere	KPEMACPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPNCGWIASRPRDDES*
Ga0105243_107193972	3300009148	Miscanthus Rhizosphere	VKPELACPRCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIASLRHPDDA
Ga0105243_107822472	3300009148	Miscanthus Rhizosphere	RCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES*
Ga0075423_128990432	3300009162	Populus Rhizosphere	RLVRPELSCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAQPRRDDD*
Ga0126377_135553142	3300010362	Tropical Forest Soil	VKPELSCPRCGTAMNHQADKLREPTSREEAESAQFGAVLIAVFACPNCGWIASQPRHEDD
Ga0134121_125574091	3300010401	Terrestrial Soil	VKPELTCPRCGTAMNHQADKLREPTTREEAESARFGSVLIAVFACPNCGR
Ga0157288_100324123	3300012901	Soil	VKPELSCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPHD
Ga0157291_100857841	3300012902	Soil	GAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES*
Ga0157296_100351062	3300012905	Soil	VKPELSCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAQPRRDDD
Ga0157296_101141212	3300012905	Soil	GAAMNHQATKLTEPTTRAEAEANAATGGILVLVFACPQCGWIGSRRAEPSET*
Ga0157283_101022242	3300012907	Soil	VKPELSCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAEPRRDGD
Ga0157306_100161483	3300012912	Soil	VKPELSCPRCGTAMNHQADKLREPTSREEAESARFGGVLIAVLACPNCGWIASLLRGDDD
Ga0157297_101019842	3300012914	Soil	VKPELSCPRCGTAMNHQADKLREPTTREEAQSARFGGVLIAVFACPNCGRIESLPQPDDD
Ga0157375_100189541	3300013308	Miscanthus Rhizosphere	VKPELTCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNC
Ga0163163_100590994	3300014325	Switchgrass Rhizosphere	VKPELTCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDHD
Ga0173483_108485352	3300015077	Soil	MKPELACPKCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIASLRRSEDG
Ga0173480_109168032	3300015200	Soil	CGTAMNHQADKLREPTSREEAESARFGGVLIAVLACPNCGWIASLLRGDDN*
Ga0173478_104823972	3300015201	Soil	MACPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAEPRR
Ga0173478_108387411	3300015201	Soil	MKPELACPRCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIA
Ga0132258_117302432	3300015371	Arabidopsis Rhizosphere	MTCARCGAAMNHQATKLTEPTTRAEAEANAATGGILVLVFACPQCGWIGSRRAEPSET*
Ga0132258_122808452	3300015371	Arabidopsis Rhizosphere	MTCPRCGAEMNHQADKLREPTTRAEAESGRLGGVLIAVFACPRCGWIASVQRDDEP*
Ga0132256_1015459682	3300015372	Arabidopsis Rhizosphere	VKPEMTCPRCGAPMNHQANKLREPTTRGEAETSPAGVVIVVFACPSCGWIASRPEGVDES
Ga0132255_1019666382	3300015374	Arabidopsis Rhizosphere	VKPEMTCPRCGAPMNHQANKLREPTTRGEAETSPAGVVIVVFACPSCGWIASRPERVDES
Ga0190266_100984422	3300017965	Soil	MTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES
Ga0173481_100526262	3300019356	Soil	MKSELACPKCGTAMNHQADKLREPTSREEAESARFGGVLIAVLACPNCGWIASLLRGDDN
Ga0173482_100375681	3300019361	Soil	VKPELSCPRCGTAMNHQADKLREPTSREDAESARVGGILVAVFACPNCGWIAAEPRRDDD
Ga0173482_100694182	3300019361	Soil	MTCARCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPGDDDES
Ga0247747_10529971	3300022737	Soil	RDAPLRPRARDDRRSLVKPEMACPHCGTAMNHQADKLREPTSREEAESARFAGVLVAVFACPNCGWIASVLRGDDD
Ga0222622_106379272	3300022756	Groundwater Sediment	EMTCARCGAAMNHQADKLREPTTGEEAETSPLGGIVIAVFACPSCGWIASRPRGDDDS
Ga0247794_103449042	3300024055	Soil	VKPELTCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAEPRRDDD
Ga0207642_100901732	3300025899	Miscanthus Rhizosphere	AVVKPAMACPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACSNCGWIASRPRDDES
Ga0207642_105152882	3300025899	Miscanthus Rhizosphere	VKPQLSCPRCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIGSQ
Ga0207642_110982502	3300025899	Miscanthus Rhizosphere	VKPAMACPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPNCGWIASRPRDDES
Ga0207688_100064012	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VKPELSCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDDD
Ga0207645_101323662	3300025907	Miscanthus Rhizosphere	VKPELSCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAEPRRDDD
Ga0207643_101634642	3300025908	Miscanthus Rhizosphere	VRSQMTCPRCGAEMNHQADKLREPTTREEAETSRLGGIVIAVFACPSCGWIASKPLREDS
Ga0207687_101307963	3300025927	Miscanthus Rhizosphere	VKPQLSCPRCGTAMNHQADKLREPTSREEAESARFGGILVAVFACPNCGWIAAEPRRDDD
Ga0207706_113531382	3300025933	Corn Rhizosphere	RAVVKPEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPGDDDES
Ga0207686_102429472	3300025934	Miscanthus Rhizosphere	VKPQLSCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDDD
Ga0207709_105681342	3300025935	Miscanthus Rhizosphere	VKPEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPGDDDE
Ga0207691_103701202	3300025940	Miscanthus Rhizosphere	PRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDDD
Ga0207661_115088352	3300025944	Corn Rhizosphere	VKPEMACPRCGTAMNHQADKLREPTSREEAESARFAGVLVAVFACPNCGWIASVLRGDDD
Ga0207712_118665141	3300025961	Switchgrass Rhizosphere	VKPELACPRCGTAMNHQADKLREPTSREDAESARFGGILVAVFACPNCGWIAAEPRRDDD
Ga0207668_100884412	3300025972	Switchgrass Rhizosphere	VKPQLSCPRCGTAMNHQADKLREPTTREEAQSARFGGVLIAVFACPNCGRIESLPPPDDD
Ga0207678_110298281	3300026067	Corn Rhizosphere	VKPELTCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPDDD
Ga0207708_109863962	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VKPQLSCPRCGTAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIGSQRRPDDV
Ga0207676_116948242	3300026095	Switchgrass Rhizosphere	VKPELSCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPHDD
Ga0207674_103509691	3300026116	Corn Rhizosphere	RRNLVKPEIACPRCGTAMNHQADKLREPTSREEAESARFAGVLVAVFACPNCGWIASVLRGDDD
Ga0207683_104946712	3300026121	Miscanthus Rhizosphere	VKPEMTCPHCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDE
Ga0209382_111974351	3300027909	Populus Rhizosphere	MKPELACAKCGTAMNHQADKLREPTSREEAQSTRRGGVVIAVFACPNCGWIASLRRPDDA
Ga0209382_123165402	3300027909	Populus Rhizosphere	VRPQMTCPKCGAEMNHQADKLREPTTREEAETSRLGGIVIAVFACPSCGWIASKPLREDS
Ga0268265_117968321	3300028380	Switchgrass Rhizosphere	TCPRCGTAMNHQADKLREPTTREEAESARFGGVLIAVFACPNCGRIESLPQPHDD
Ga0247820_101342512	3300028597	Soil	VKPEMTCPRCGAAMNHQADKLREPTTREEAEMSPLGGIVIAVFACPSCGWIASRPGDDDE
Ga0247819_102802802	3300028608	Soil	VKPEMTCPRCGGAMNHQADKFREPTTREEAEMSPLGGIVIAVFACPSCGWIASRPRGDDE
Ga0247824_106892072	3300028809	Soil	VKPEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGA
Ga0247826_103829132	3300030336	Soil	MRPELACPRCGAAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWITSLRHPDDA
Ga0247826_105293282	3300030336	Soil	VKPEMACPRCGTAMNHQADKLREPTSREEAESARFAGVLVAVFACPNCGWIASVLRGGDD
Ga0307498_100044543	3300031170	Soil	MTCPRCGAPMNHQANKLVEPTTREEAESSGALGGILVAVFACPNCGFIATRRDEDQDR
Ga0307468_1017297702	3300031740	Hardwood Forest Soil	MSPDLTCPRCGAAMNHQADKLREPTTREEEETSRLGGIVIAVFACPQCGWIASR
Ga0310904_105129631	3300031854	Soil	GMKPELTCPRCGTTMNHQADKLREPTNREEAESTRLGGVLIAVFACPSCGWIASQTRTDD
Ga0310904_105608762	3300031854	Soil	PEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES
Ga0310892_102849282	3300031858	Soil	MRPELACPKCGAAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIASLRHPDDA
Ga0310892_104578262	3300031858	Soil	VKPEMTCPRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDE
Ga0310892_105673212	3300031858	Soil	MKPELACPKCGTAMNHHADKLREPTSREEAQSTRLGGVVIAVFACPNCGWVGSLRRPDDA
Ga0310900_107866482	3300031908	Soil	MKPELTCPRCGTTMNHQADKLREPTNREEAESTRLGGVLIAVFACPSCGWIASQTRTDDT
Ga0310903_103611891	3300032000	Soil	PRCGAAMNHQADKLREPTTREEAETSPLGGIVIAVFACPSCGWIASRPRGDDES
Ga0310890_101288091	3300032075	Soil	MRPELACPRCGAAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIASLRHPDDA
Ga0310890_101394533	3300032075	Soil	MKPELTCPRCGTTMNHQADKLREPTNREEAESTRLGGVLIAVFACPNCGWIASRPGTDDT
Ga0310895_102575162	3300032122	Soil	VKPEMACPRCGTAMNHQADKLREPTTREEAESTRHGGVVIAVFACPNCGWIASLRHPDDA
Ga0307471_1033009792	3300032180	Hardwood Forest Soil	VTHEMACPRCGAAMNFEAEKLREPTTREEADSSRPLGGIVIAVFACPNCGWIAERREDDADA
Ga0310896_103145261	3300032211	Soil	VKPEMTCPRCGAAMNHQADKLREPTTREEAESTRLGGVVIAVFACPNCGWIASLRHPDDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073618

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences