Metagenome Family F073616

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073616
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	111 residues
Representative Sequence	MPKGKFFIAGLGLVVIALIIVGVVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYT
Number of Associated Samples	98
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.17 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (36.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.66% β-sheet: 19.53% Coil/Unstructured: 57.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02518	HATPase_c	14.17
PF01145	Band_7	3.33
PF01323	DSBA	2.50
PF01904	DUF72	2.50
PF00583	Acetyltransf_1	1.67
PF13462	Thioredoxin_4	1.67
PF00144	Beta-lactamase	1.67
PF00326	Peptidase_S9	0.83
PF01916	DS	0.83
PF01053	Cys_Met_Meta_PP	0.83
PF13460	NAD_binding_10	0.83
PF05726	Pirin_C	0.83
PF13360	PQQ_2	0.83
PF13090	PP_kinase_C	0.83
PF12680	SnoaL_2	0.83
PF05235	CHAD	0.83
PF03551	PadR	0.83
PF00149	Metallophos	0.83
PF13561	adh_short_C2	0.83
PF01804	Penicil_amidase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.50
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.67
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.67
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.67
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.83
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.83
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.83
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.83
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.83
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.83
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.83
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.83
COG1899	Deoxyhypusine synthase	Translation, ribosomal structure and biogenesis [J]	0.83
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.83
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.83
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.83
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.83
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.83
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.83
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.83
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.50 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	4.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	4.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.83 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.67 %
Pusillimonas noertemannii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → Pusillimonas noertemannii	0.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0024609	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_12677297	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104677886	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300000559\|F14TC_100701876	All Organisms → cellular organisms → Bacteria → Acidobacteria	1494	Open in IMG/M
3300000559\|F14TC_100889951	All Organisms → cellular organisms → Bacteria → Acidobacteria	2485	Open in IMG/M
3300000559\|F14TC_101489711	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1027115	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300000787\|JGI11643J11755_10848289	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300000955\|JGI1027J12803_102163025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300000955\|JGI1027J12803_103823599	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300004114\|Ga0062593_103341942	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300004268\|Ga0066398_10148639	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300005289\|Ga0065704_10598949	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300005290\|Ga0065712_10165517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275	Open in IMG/M
3300005293\|Ga0065715_10621130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	695	Open in IMG/M
3300005328\|Ga0070676_10757740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300005335\|Ga0070666_10480374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300005343\|Ga0070687_100422072	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300005365\|Ga0070688_100157873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1556	Open in IMG/M
3300005366\|Ga0070659_100433093	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
3300005406\|Ga0070703_10215481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	761	Open in IMG/M
3300005445\|Ga0070708_100276870	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300005459\|Ga0068867_100117359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2052	Open in IMG/M
3300005467\|Ga0070706_101259105	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300005468\|Ga0070707_102212937	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300005471\|Ga0070698_100041536	All Organisms → cellular organisms → Bacteria	4721	Open in IMG/M
3300005518\|Ga0070699_101919350	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300005536\|Ga0070697_100445846	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300005543\|Ga0070672_100881155	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300005577\|Ga0068857_100747612	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M
3300005617\|Ga0068859_100159731	All Organisms → cellular organisms → Bacteria → Acidobacteria	2333	Open in IMG/M
3300005617\|Ga0068859_100415596	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005618\|Ga0068864_102713525	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300005719\|Ga0068861_101998728	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300005842\|Ga0068858_100220371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1797	Open in IMG/M
3300006358\|Ga0068871_101282596	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300006844\|Ga0075428_102497103	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300006845\|Ga0075421_102524114	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300006846\|Ga0075430_101431179	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300006847\|Ga0075431_100608756	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M
3300006847\|Ga0075431_100768784	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	938	Open in IMG/M
3300006847\|Ga0075431_102103150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → Pusillimonas noertemannii	519	Open in IMG/M
3300006852\|Ga0075433_10399481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1213	Open in IMG/M
3300006852\|Ga0075433_10715451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	877	Open in IMG/M
3300006852\|Ga0075433_11400073	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300006876\|Ga0079217_10732867	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300006880\|Ga0075429_101690746	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300006881\|Ga0068865_101165707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300006894\|Ga0079215_11142664	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300007004\|Ga0079218_11581432	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300007004\|Ga0079218_12223600	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300007076\|Ga0075435_100114762	All Organisms → cellular organisms → Bacteria → Acidobacteria	2242	Open in IMG/M
3300009094\|Ga0111539_11874527	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300009100\|Ga0075418_11674950	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300009147\|Ga0114129_12585782	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300009148\|Ga0105243_12768900	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300009168\|Ga0105104_10691411	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300010044\|Ga0126310_11075581	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300010047\|Ga0126382_10558223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	933	Open in IMG/M
3300010047\|Ga0126382_10878934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	773	Open in IMG/M
3300010358\|Ga0126370_12062895	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300010358\|Ga0126370_12658133	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300010359\|Ga0126376_10948940	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300010360\|Ga0126372_10650479	All Organisms → cellular organisms → Bacteria → Acidobacteria	1020	Open in IMG/M
3300010397\|Ga0134124_12580849	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300010399\|Ga0134127_11550562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	736	Open in IMG/M
3300010399\|Ga0134127_12496478	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300010403\|Ga0134123_10090268	All Organisms → cellular organisms → Bacteria → Acidobacteria	2412	Open in IMG/M
3300010403\|Ga0134123_13228285	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300011119\|Ga0105246_12482134	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300012021\|Ga0120192_10060254	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300012022\|Ga0120191_10140765	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300012094\|Ga0136638_10620716	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300012948\|Ga0126375_10684238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300012961\|Ga0164302_11122248	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300012984\|Ga0164309_10514592	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300013102\|Ga0157371_10528469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300013297\|Ga0157378_10316352	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300013297\|Ga0157378_11256627	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300013308\|Ga0157375_13596864	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300013760\|Ga0120188_1028983	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300014325\|Ga0163163_12473130	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300014969\|Ga0157376_11506455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300015372\|Ga0132256_100087701	All Organisms → cellular organisms → Bacteria	2996	Open in IMG/M
3300015372\|Ga0132256_101663716	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300015372\|Ga0132256_101950430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300015373\|Ga0132257_100470441	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300015373\|Ga0132257_102160932	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300015373\|Ga0132257_103166971	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300015374\|Ga0132255_100808496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1398	Open in IMG/M
3300015374\|Ga0132255_103423556	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300018027\|Ga0184605_10187571	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300018075\|Ga0184632_10361206	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300018429\|Ga0190272_10587930	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300018429\|Ga0190272_13301717	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300018469\|Ga0190270_11623624	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300022694\|Ga0222623_10379934	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300025327\|Ga0209751_10427421	All Organisms → cellular organisms → Bacteria → Acidobacteria	1094	Open in IMG/M
3300025904\|Ga0207647_10518601	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300025926\|Ga0207659_10513564	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300025931\|Ga0207644_10127896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1941	Open in IMG/M
3300025934\|Ga0207686_10685335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	813	Open in IMG/M
3300025940\|Ga0207691_10347768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300025945\|Ga0207679_10466220	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300026089\|Ga0207648_11724872	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300026095\|Ga0207676_12551844	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300026116\|Ga0207674_10806962	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300026142\|Ga0207698_12074898	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300027880\|Ga0209481_10128347	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300028380\|Ga0268265_10837848	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300028381\|Ga0268264_10445217	All Organisms → cellular organisms → Bacteria → Acidobacteria	1254	Open in IMG/M
3300031740\|Ga0307468_100628134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
3300031740\|Ga0307468_102514306	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300031854\|Ga0310904_10380930	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300031854\|Ga0310904_11030905	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300031911\|Ga0307412_11493031	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300031943\|Ga0310885_10294967	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300032159\|Ga0268251_10456971	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300032174\|Ga0307470_10881480	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300034779\|Ga0334945_113848	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.83%
Environmental	Environmental	49.17%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.83%
Terrestrial	Environmental → Terrestrial	45.00%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.17%
Sediment	Environmental → Aquatic → Sediment	2.50%
Freshwater	Environmental → Aquatic → Freshwater	1.67%
Roots	Host-Associated → Plants → Roots	1.67%
Phylloplane	Host-Associated → Plants → Phylloplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Ice	Environmental → Aquatic → Freshwater → Ice	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.83%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.33%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_00246091	2228664021	Soil	MLNGKYVMALVAVILVAVLIGGVLTYANIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTVAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYT
ICChiseqgaiiFebDRAFT_126772971	3300000363	Soil	MPKGKFFIALLILIVVSVLIGAAVTFTNIKYAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYSDPTKIAEYVRKYGFSEEERH
INPhiseqgaiiFebDRAFT_1046778862	3300000364	Soil	MPNGKYFIGGLFLVVMVILXAAAVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTLAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKIAEYVRKYGFSEEERH
F14TC_1007018761	3300000559	Soil	MPKGKFFIAVLILIVITFLIGGVVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDIS
F14TC_1008899514	3300000559	Soil	MPKGKFFIAVLILIVVALLIGGVVSFSNIKFAQEGTVQVVTKWGAIERIYTPADGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKIPEYVRKYGFSEEERHRRRNEILKGIVQ
F14TC_1014897111	3300000559	Soil	MYREKPEILXITGEGNSMPKGKFFFAALILLVTALVIGGVVTFSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLIAYTDPTKIAEYVRKYGFSEEERHRRRNEILKGIVQTEARN
KanNP_Total_noBrdU_T14TCDRAFT_10271151	3300000596	Soil	MPKGKFFIAVLILIVVALLIGGVVSFSNIKFAQEGTVQVVTKWGAIERIYTPADGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPTK
JGI11643J11755_108482891	3300000787	Soil	MLNGKYVMALVAVILVAVLIGGVLTYANIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTVAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKIAEYVRKYGFL
JGI1027J12803_1021630252	3300000955	Soil	MPNGKFFIGVLLLIVFALLVGGAVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTLAPGRKSYEVNVKSFTESAPVR
JGI1027J12803_1038235991	3300000955	Soil	MPKGKFFIAALILLVTALVIGGVVTFSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTLAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKIAEYVRKYGFSEEERH
Ga0062593_1033419421	3300004114	Soil	MPKGKLLVIPVSVTLILLIAGAITYSNIKFAQEGTVQVVTRWGAIERIYTPSDGWFTTLAPGRKNYEVNIKSFTESAPVRVTSKDN
Ga0066398_101486391	3300004268	Tropical Forest Soil	MPQGKLLISVMVLIVLALVVVGVTYSNIKFAQEGTVQVVTNWGAIERIYTPADGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVD
Ga0065704_105989492	3300005289	Switchgrass Rhizosphere	MRNGKLFWSLLTLIVILVTVVGSAAYSNIKYAQEGTVQVVTRWGAIERLYTPADGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAFTDPSRIAEYVRKYGFSEEE
Ga0065712_101655172	3300005290	Miscanthus Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVYISLTAYTDPNKIAEYVRKYGFSEEERH
Ga0065715_106211302	3300005293	Miscanthus Rhizosphere	MWNGKWFWSSLLILIVIFLAVAGAIAYANIKYAQEGTVQVVTRWGAIEHVYTASDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSK
Ga0070676_107577402	3300005328	Miscanthus Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTE
Ga0070666_104803741	3300005335	Switchgrass Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVDISLTAYTDPNKIAEYVRK
Ga0070687_1004220721	3300005343	Switchgrass Rhizosphere	MPKGKLLVIPVSVTLILLIAGAITYSNIKFAQEGTVQVVTRWGAIERIYTPSDGWFTTLAPGRKNYEVNIKSFTESAPVRVTSKDNAALQVEISVTAYTDPNKVADYVRKY
Ga0070688_1001578731	3300005365	Switchgrass Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVDISLTAYTDPNKIAEYVRKYGFSEEERHRRRNEILKGI
Ga0070659_1004330932	3300005366	Corn Rhizosphere	MPKGKYAIAVLILVVIVVVVGGALTFANIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVR
Ga0070703_102154812	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPKGKFFIAVLLLIVITLIVGGVVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTITPGRKSYEVNIKSFTESAPVRV
Ga0070708_1002768703	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPKGKFFIAVLLLIVITLIVGGVVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAP
Ga0068867_1001173592	3300005459	Miscanthus Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVYISLTAYTDPNKIAEYVRKYGFSEEERHRRRN
Ga0070706_1012591052	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPKGKFFIALLGLAVIALLVGGLVTFSNIKYAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKS
Ga0070707_1022129371	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPKGKFLVALMLIAVGVLIAGLVIFKNIKYAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRTSYEVNIKSFTETAQVRVTSKDNAALQVEISLTAYTDPAKIAEYVRKY
Ga0070698_1000415364	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPKGKFFIALLGLAVIALLVGGLVTFSNIKYAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPAKIAEYVRKYGFSEDERH
Ga0070699_1019193501	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPKGKFLIAVLILIVIALLIGGVVFSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPSKIAEYVRKYGFSEEERHRRRNEI
Ga0070697_1004458461	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPKGKLFVVGLSLMLVFLIIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTA
Ga0070672_1008811551	3300005543	Miscanthus Rhizosphere	MPRGKFFIAMLILVVIAIVIGVVVTYSNIKYAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKD
Ga0068857_1007476122	3300005577	Corn Rhizosphere	MPRGKFFIAMLILVVIAIVIGVVVTYSNIKYAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPAKVAEYVRKYGFLEEERHRRRNEILK
Ga0068859_1001597312	3300005617	Switchgrass Rhizosphere	MWNGKWFWSSLLILIVIFLAVAGAIAYANIKYAQEGTVQVVTRWGAIEHVYTASDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQLEISVTA*
Ga0068859_1004155961	3300005617	Switchgrass Rhizosphere	MPNGKFFIAGLGVVVVVVIVGAFVVFSNIKFAQEGTVQVVTKWGAIERIYTPADGWFTTIAPGRKSYEVNLKSFTESAPVRVTSKDNAALQVDVSLTAY
Ga0068864_1027135252	3300005618	Switchgrass Rhizosphere	MPNGKFFFVGLGVVVLVVVIGTAVVYSNIKFAQEGTVQVVTKWGAIERIYTPSDSWFTTIAPGRKSYEVNIKSFTESAPV
Ga0068861_1019987281	3300005719	Switchgrass Rhizosphere	MPRRLYFIGGLVLIVILLVVGIMVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAQVRVTSKDNAALQVEISLTAYTDPAKIADYVRKYGFSEEERHRRRNEILKGIVQTEA
Ga0068858_1002203712	3300005842	Switchgrass Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQV
Ga0068871_1012825962	3300006358	Miscanthus Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVDISLTAYTDPNKIADYVRKYGFSEEERHRRRNEILKGIVQTE
Ga0075428_1024971031	3300006844	Populus Rhizosphere	MRSRLFWYLLVISIVTFLTVAGAVTYANIKYAQEGTVQVVTRWGAIERIYTPSDGWFTTLAPGRKSYEVNIKSFTESAPVRVTSKDNAALQV
Ga0075421_1025241142	3300006845	Populus Rhizosphere	MNEIDRPLTANKGMKNMLKGKWLLVGLILIAFTLTIAGAITYSNIKYAQEGTVQVVTRWGAIERIYLPADGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVDISVTAYTDPSRVADYVRKYG
Ga0075430_1014311792	3300006846	Populus Rhizosphere	MKNMLKGKWFLVGLILIAFTLTIAGAITYSNIKYAQEGTVQVVTRWGAIERIYLPADGWFTTIAPGRKSYEVNVK
Ga0075431_1006087561	3300006847	Populus Rhizosphere	MNGIEIRDELNGGRKYMPKGKLLMVLVSLIMVFLIIGGAVAYSNIKFAQEGTVHVVTNWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVEISVTAYTD
Ga0075431_1007687841	3300006847	Populus Rhizosphere	MNEIDRPLTANKGMKNMLKGKWFLVGLILIAFTLTIAGAITYSNIKYAQEGTVQVVTRWGAIERIYLPADGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVDISVTAYTDPSRVADYVRKYGFSEEERHRRR
Ga0075431_1021031501	3300006847	Populus Rhizosphere	MPKGKLFVVGLTVVLLFLIIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPADGWFTTIAPGRKSYEVNVKSFTESASVRVTSKDNAALQVEISVTAYT
Ga0075433_103994813	3300006852	Populus Rhizosphere	MRNGKLFWFPLTLIVTILIVAGSIAYSNIKYAQEGTVQVVTRWGAIERVYTASDGWFTTIAPGQKSYEVNIKSFTESA
Ga0075433_107154512	3300006852	Populus Rhizosphere	MRNGKLFWFPLILIVTILTVASSVTYLNIKYAQEGTVQVVTRWGAIERVYTASDGWFTTIAPGQKSYEVNIKSFTESAPVRVTSKDNAALQVDISVTAYTDPAKVADYVRKYGFSEEERHRRR
Ga0075433_114000732	3300006852	Populus Rhizosphere	MRNGKLYWSILILIVIFLTVAGAIAYANIKYAQEGTVQVVTRWGAIERVYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNA
Ga0079217_107328672	3300006876	Agricultural Soil	MLQGKWLIAGLVLIAFSLIIGASITYANIKYAQEGTVQVVTRWGAIERIYAPADGWFTTIAPGRKSYEVNVKSFTETAPVRVTSKDNAALQVEISVTAYTDPNRVADYVRKYGFLEEERRHRH
Ga0075429_1016907461	3300006880	Populus Rhizosphere	MNGIEIRDELNGGRKYMPKGKLLMVLLSLIIVCLIIGGAVAYSNIKFAQEGTVHVVTNWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVEISVTAY
Ga0068865_1011657071	3300006881	Miscanthus Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTES
Ga0079215_111426641	3300006894	Agricultural Soil	MPKGKYFVAVVLVVIVLLIGAVVTYSNIKFAQEGSVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYDVNIKSFTETAQVRVTSKDNAALQVEISLTAYTDPAKVAEYVRKYGFSEEERHRRRSEILKGIVQTEARN
Ga0079218_115814322	3300007004	Agricultural Soil	MKTSNTTLTLNKGTKQMLQGKWLIAGLVLIAFSLIIGASITYANIKYAQEGTVQVVTRWGAIERIYAPADGWFTTIAPGRKSYEVNVKSFTETAPVRVT
Ga0079218_122236002	3300007004	Agricultural Soil	MMKGKWFIAVLIVVVLTVSVGGAIAYSNIKFAQEGTVQVVTRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEI
Ga0075435_1001147621	3300007076	Populus Rhizosphere	MPKGKLFIVGLTVILMFLIIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPADGWFTTVAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAYTDPNKVADYVRKYGF
Ga0111539_118745271	3300009094	Populus Rhizosphere	MNKNLSTQTLVSNGERVTMPKARLFIAMVTLLVFVLIGSLVIFKNMKYAQEGTVQVVTNWGAIERIYTPADGWFTTIAPGRKSYEVNLKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKVADYVRKYGFSEEERHRRRNEILKGIV
Ga0075418_116749502	3300009100	Populus Rhizosphere	MNSERWSEIVLSKGGGNSMPKGKFFVAVVILTVIGLLIAGAVTYANIKFAQEGTVHVVTRWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAAVRVTSKDNAALQVEISVTAFTDPPK
Ga0114129_125857821	3300009147	Populus Rhizosphere	MPSGKLFVGLMTVVVIVVVVGSLATLSNIKYAQEGTVQVVTKWGAIERIYTPADGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPAKVAE
Ga0105243_127689001	3300009148	Miscanthus Rhizosphere	MPIGKRLLIVLAMSLILLTVGGATIYSNIKFAQEGTVQVVTRWGAIERIYIPSDGWFTTLAPGRKNYEVNIKS
Ga0105104_106914111	3300009168	Freshwater Sediment	MEQMPKLYGGPTYMSKSKLFFAVLVLSLICLAIAVAITYSNIKFAQEGTVQVVTRWGAIERIYTPADGWFTTLAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEVSVTAYTDPGKVAEYVRKYGFSEE
Ga0126310_110755811	3300010044	Serpentine Soil	MNSKFTFVLLGVLALVLLIGAGVAFANINYTQEGTVKVVTSFGRIERVYRPEDGWFTTLAPGRQSYEVNIKSFTEKAPVRVTSKDNAALQVEISVTAFTDPQHVEEYVRKYGF
Ga0126382_105582232	3300010047	Tropical Forest Soil	MTTNHPTKLKTTNKGEKFMRNGKLFWFPLTLTVTILTIAGSIAYSNIKYAQEGTVQVVTRWGAIERIYTASDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISLTAYTDPAKVADY
Ga0126382_108789342	3300010047	Tropical Forest Soil	MTNHPTNLETTNKGEKFMRNGKLFWFPLTLTVTILTIAGSIAYSNIKYAQEGTVQVVTRWGAIERVYTPSDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISLTAYTDPAKVADY
Ga0126370_120628951	3300010358	Tropical Forest Soil	MNQEVLREMFTNPEGGNSMPKGTLFIATLILIVIVLLIGGAITYSNIKFAQEGTVQVVTKWGAIERIYTASDGWFTTLAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKIAEYVRKYGFSEEERHRRR
Ga0126370_126581331	3300010358	Tropical Forest Soil	MKTSLIEKLTDKKEQHMPKGKLLVMVLVMSLILLMAGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPSDGWFTTLAPGRKNYEVNIKSFTESAPVRVTSKDNAALQVEISVTAYTDPNKVADYVRKYGFSEEERHRRRNEILKGIVQT
Ga0126376_109489402	3300010359	Tropical Forest Soil	MTTNHPTKLKTTNKGEKFMQNGKLFWFPLTLTVTILTIAGSIAYSNIKYAQEGTVQVVTRWGAIERVYTPSDGWFTTIAPGRQSYEVNVKSFTESAPVRVTSKDNAALQVEISLTAYTDPAKVADYVRKYGIF*
Ga0126372_106504792	3300010360	Tropical Forest Soil	MNQEVLREMFTNPEGGNSMPKGTLFIATLILIVIVLLIGGAITYSNIKFAQEGTVQVVTKWGAIERIYTASDGWFTTLAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKIAEYVRKLEAKTPAEDDVAEPAATQADELPPSA
Ga0134124_125808491	3300010397	Terrestrial Soil	MPKGKLFVVGLSLILVFLIIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAYTDPNRVADYVRKYG
Ga0134127_115505621	3300010399	Terrestrial Soil	MPKGKFLIALLILVVIALLIGGVVFSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAA
Ga0134127_124964781	3300010399	Terrestrial Soil	MLNNKLWWLPLILIVTILTVAGAITYANIKYAQEGTVQVVAKWGAIERVYTPSDGWFTTITPGRKSYEVNVKSFTESAQVRVTSKDNAALQVEISVTAYTDPAKV
Ga0134123_100902684	3300010403	Terrestrial Soil	MSQEQWPSGYENQRRKLMPKSVYFIVSVVVIVVVLLIAGMATYSNIKFAQEGSVQVVTKWGAIERIYTPSDGWFTTLAPGRKSYDVNIKSFTESAPVRVTSKDNAALQVEISLTAYTDPTKVA
Ga0134123_132282851	3300010403	Terrestrial Soil	MPKGKLFVVGLSLMLVFLIIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAYTDPNRVADYVRKYGF
Ga0105246_124821342	3300011119	Miscanthus Rhizosphere	MPNGKFFIAGLGVVVVVLIVGAFVVFSNIKFAQEGTVQVVTKWGAIERIYTPADGWFTTIAPGRKSYEVNLKSFTESAPVRVT
Ga0120192_100602541	3300012021	Terrestrial	MKKEQWLEAVNINRGGNSMPTGKFFIAVVILIVTVLLVGAIVTFTNIKYAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYDVNIKSFTESAPVRVTSKDNAALQVEISLTAYTDP
Ga0120191_101407651	3300012022	Terrestrial	MPVMKQHFDSIERTSLPKGVRRMPNGKIVITLVIVLATILAIEVVATYSNIKLAPEGAVQVVTRWGAIERIYTPSDSWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVEISITAYTDPTKIAEYVRKYGFSEEERHRRRNEILKGI
Ga0136638_106207161	3300012094	Polar Desert Sand	MMSSVRPYLLVGAIVVIALIAGMVTMSNINYAQEGTVKVVTQWGAIQQVYKPADGWLTTLAPGKKAYEVNVRSFTETAPVRVTSK
Ga0126375_106842382	3300012948	Tropical Forest Soil	MTANELTNLKTIDNKENLMWNGKVFWFVVCLIVGLLAVLSTVTYANIKYAQEGTVQVVTRWGAIERVYTASDGWFTTMAPGRKSYEVNVKSFTETAPVRVTSKDNAALQVEISVTAYTDPAKVAEY
Ga0164302_111222482	3300012961	Soil	MLNSKLWWLPLILIVTILTVAGAISYANIKYAQEGTVQVVTKWGAIERVYTPSDGWFTTITPGRKSYEVNVKSFTESAQVRVTSKDNAALQVEISVTAYTDPA
Ga0164309_105145921	3300012984	Soil	MPKGKLFVVGLSLTLIFLIIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAYTDPNRVADYVRKYGFSEEERH
Ga0157371_105284691	3300013102	Corn Rhizosphere	VNKEQWLSTLTNKTGGNSMPKGKFFIGGLLLIVLAPSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVDISLTAYTDPNKIAEYVRKYGFSEEERHRRRNEILKGI
Ga0157378_103163522	3300013297	Miscanthus Rhizosphere	MPKGKFLIALLILVVIALLIGGVVFSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGPKSYEVNIKSF
Ga0157378_112566271	3300013297	Miscanthus Rhizosphere	MKQIDRTIPFNKGASLMPKGKLFVVGLAVILMLLIAGAAATYSNIKFAQEGTVQVVTRWGAIERIYTPADGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKVNAALQVEISVTAYTDPNKVADYVRKYGFSEEERHRRRNEILKGIVQTEAR
Ga0157375_135968641	3300013308	Miscanthus Rhizosphere	METKIGKTLTINSGGNSMPNGKFFIAGLGVVVVVVVVGAFVVFSNIKFAQEGTVQVVTKWGAIERIYTPADGWFTTIAPGRKSYEVNLKSFTESAPVRVTSKDNAALQVDIS
Ga0120188_10289831	3300013760	Terrestrial	MNREQWPEIVKINRGGGSMPQGKFFIAGVILLVILVLIVGVVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPEKIAEYVRKYGFSEEERHRRRNEILKGIVQTEARKS
Ga0163163_124731301	3300014325	Switchgrass Rhizosphere	MPRGKFFIAMLILVVIAIVIGVVVTYSNIKYAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYT
Ga0157376_115064552	3300014969	Miscanthus Rhizosphere	VNKEQWLSTLTNKTGGNSMPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVT
Ga0132256_1000877012	3300015372	Arabidopsis Rhizosphere	MLNGKYVMALLTLILVAIVIGGIVAYANIKFAQEVTVQVVTKWGAIERIYTPSDGWFTTVAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTADTDPTKVAEYVRKYGFSEEERHRRRNEILKGIHSEGVTYL*
Ga0132256_1016637161	3300015372	Arabidopsis Rhizosphere	MKHIDRTNPNTKGVTSMPKGKLFIGALTLILMLLIIGGAATYSNIKFAQEGTVQVVTRWGAIERIYTPADGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAYTDPNKVADYVRKYGFSEEERHRLRNEILK
Ga0132256_1019504301	3300015372	Arabidopsis Rhizosphere	MNKEQWLSSLTNKTGRNSMPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIECIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAA
Ga0132257_1004704412	3300015373	Arabidopsis Rhizosphere	MLNGKYVMALLTLILVAIVIGGIVTYANIKFAQEGTVQVVTKWGAIESIYTPSDGWFTTVAPGRKSYEVNIKSFTESAPV*
Ga0132257_1021609321	3300015373	Arabidopsis Rhizosphere	MNKEQWLSSLTNKTGGNSMPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVDISLTAYTDPNKIAEYVRKYGFSEEERH
Ga0132257_1031669711	3300015373	Arabidopsis Rhizosphere	MPKGKLFVVVLTMILMFLVIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSITESAPVRVTSKDNAALQVEI
Ga0132255_1008084962	3300015374	Arabidopsis Rhizosphere	MNKEQWLSTLTNKTGGNSMPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVDISLTAYTDP
Ga0132255_1034235561	3300015374	Arabidopsis Rhizosphere	MPNGKFLVALMMVIVVALVVASTVTYSNIKFAQEGTVQVVTKWGAIERIYTPADGWFTTVAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPAKIAE
Ga0184605_101875712	3300018027	Groundwater Sediment	MPKGKFFIAVVILIVVVLLIGGMVTFTNIKYAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYDVNIKSFTESAQVRVTSKDNAALQVDISLTAYTDPAKIAEYVRKYGFSEDDRHRRRNEILKGIVQTE
Ga0184632_103612061	3300018075	Groundwater Sediment	MPRGKFFIAVVILIVIVLLIGGMVTFTNIKYAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPAKVAEYVRKYGFSEEERHRRRTEILKGIV
Ga0190272_105879302	3300018429	Soil	MPKGKFFIAMVILIVIVLLIGVTVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYDVNIKSFTESAQVRVTSKDNAALQVDISLTAYTDPAKIAEYVRKYGFLEDERHRRRSEILKGIVQ
Ga0190272_133017171	3300018429	Soil	MPRRVYFIGGLVLVVILLVVGAMVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYDVNIKSFTETAQVRVTSKDNAALQVEISLTAYSDPTKIAEYV
Ga0190270_116236242	3300018469	Soil	MPRRLYFIGGLVLIVILLVVGVMVTYSNIKFAQEGSVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYDVNIKSF
Ga0222623_103799341	3300022694	Groundwater Sediment	MPTGKFFIAVVILIVIVLLIGGMVTFTNIKYAQEGSVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYDVNIKSFTESAPVRVTSKDNAALQ
Ga0209751_104274212	3300025327	Soil	MPRGKFFIAVVILIVIVLLIGGMVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYDVNIKSFTESAPVRVTSKDNAALQVEISLTAYTDPARVAEYVRKYGFLEEERH
Ga0207647_105186011	3300025904	Corn Rhizosphere	MLNGKYVMALLTLILVVAAIGGVVTYANIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTVAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTD
Ga0207659_105135641	3300025926	Miscanthus Rhizosphere	MPKGKFFIGALLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVYISLTAYTDPNKIAEYVRKYGFSEEERHRRRNEILKGIVQTEARNSFADY
Ga0207644_101278961	3300025931	Switchgrass Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVDISLTAYTDPNKIAEYVRKYGFSEEERHRRRNEILKGIV
Ga0207686_106853352	3300025934	Miscanthus Rhizosphere	MPKGKFLIAVLILIVIALLIGGVVFSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYSDPTK
Ga0207691_103477682	3300025940	Miscanthus Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNA
Ga0207679_104662202	3300025945	Corn Rhizosphere	MPRGKFFIAMLILVVIAIVIGVVVTYSNIKYAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPAKVAEY
Ga0207648_117248721	3300026089	Miscanthus Rhizosphere	MKNIDRLTIFDKGTKRMPKGTWFVAGLILVVLSLIIGGAIAYSNIKFAQEGTVQVVTRWGAIERIYTPADGWFTTLAPGQKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAYTDPNKVADYVRKYGFSEEERHRRRNEILKGIV
Ga0207676_125518441	3300026095	Switchgrass Rhizosphere	MPNGKFFFVGLGVVVLVVVIGTAVVYSNIKFAQEGTVQVVTKWGAIERIYTPSDSWFTTIAPGRKSYEVNIKSFTESAPVR
Ga0207674_108069621	3300026116	Corn Rhizosphere	MPRGKFFIAMLILVVIAIVIGVVVTYSNIKYAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPAKVAEYVRKYGFLEEERHRRVPGLPR
Ga0207698_120748982	3300026142	Corn Rhizosphere	MPKGKFFIGGLLLIVLALSIGGAVAYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSRDNAALQVYISLT
Ga0209481_101283471	3300027880	Populus Rhizosphere	MLQGKWLIAALVLIAFSLIIGASITYANIKYAQEGTVQVVTRWGAIERIYAPADGWFTTIAPGRKSYEVNVKSFTETAPVRVTSKDNAALQVEISVTAYTDP
Ga0268265_108378482	3300028380	Switchgrass Rhizosphere	MLNGKYVMALLTLILVVAAIGGVVTYANIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTVAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLT
Ga0268264_104452172	3300028381	Switchgrass Rhizosphere	MMKGKWFLAGLLLIALSLITGGAVTYSNIKFAQEGTVQVVSRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSFTESASVRVTSKDNAALQVEISVTAYT
Ga0307468_1006281341	3300031740	Hardwood Forest Soil	MPKGKFFIAGLGLVVIALIIVGVVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTDPNKIAEYVRKYGFSEEE
Ga0307468_1025143061	3300031740	Hardwood Forest Soil	MPKGKFLIAVLILIVIALLIGGVVFSNIKFAQEGTVQVVTKWGAIERIYAPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYTD
Ga0310904_103809301	3300031854	Soil	MPKVRLFIAMVTLLVVVLIGSLVIFKNMKYAQEGTVQVVTNWGAIERIYTPADGWFTTIAPGRKSYEVNLKSFTESAPVRVTSKDNAALQVDISLTAYTDPTKVADYVRKYGFSEEERHRRRNEILKGIVQTEARN
Ga0310904_110309051	3300031854	Soil	MPKGKLFVVVLTMILMFLVIGGAVTYSNIKFAQEGTVQVVTRWGAIERIYTPTDGWFTTIAPGRKSYEVNVKSFTESAPVRVTSKDNAALQVEISVTAYTDPNRVADYVRKYGFSEEERHRRRNEIL
Ga0307412_114930312	3300031911	Rhizosphere	MKTSNTTLTLNKGMKQMLQGKWFIAGLVLIAFSLIIGASITYANIKYAQEGTVQVVTRWGAIERIYAPADGWFTTIAPGRKSYEVNVKSFTETAPVRVTSKDNAAL
Ga0310885_102949672	3300031943	Soil	MPKVRLFIAMVTLLVVVLIGSLVIFKNMKYAQEGTVQVVTNWGAIERIYTPADGWFTTIAPGRKSYEVNLKSFTESAPVRVTSKDNAALQVDISLTAYTDSTKVADYVRKYGFSEEERHRRRNEILKGIVQTEARNS
Ga0268251_104569711	3300032159	Agave	MRNGKLFWSMFILIVIFLTVAGAIAYANIKYAQEGTVQVVTRWGAIERVYTASDGWFTTIAPGRKSYEVNVKSFTESAPVRVT
Ga0307470_108814801	3300032174	Hardwood Forest Soil	MPKGKFFIAGLGLVVIALIIVGVVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAPVRVTSKDNAALQVDISLTAYT
Ga0334945_113848_1_363	3300034779	Sub-Biocrust Soil	MKKEKWQESVKMNGGESMPRGKYFVAVVILILIVLLIGGMVTYSNIKFAQEGTVQVVTKWGAIERIYTPSDGWFTTIAPGRKSYEVNIKSFTESAQVRVTSKDNAALQVEIALTAYTDPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073616

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences