Metagenome / Metatranscriptome Family F073517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073517
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	66 residues
Representative Sequence	APELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Number of Associated Samples	111
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	77.50 %
% of genes from short scaffolds (< 2000 bps)	78.33 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (34.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.93% β-sheet: 0.00% Coil/Unstructured: 34.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF14269	Arylsulfotran_2	54.17
PF07690	MFS_1	2.50
PF16640	Big_3_5	0.83
PF14026	DUF4242	0.83
PF00775	Dioxygenase_C	0.83
PF00410	Ribosomal_S8	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0096	Ribosomal protein S8	Translation, ribosomal structure and biogenesis [J]	0.83
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.33 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.33 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.00 %
Unclassified	root	N/A	10.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	74.17 %
Unclassified	root	N/A	10.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.83 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.17 %
Unclassified	root	N/A	10.83 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	5.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.17 %
Unclassified	root	N/A	10.83 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5.00 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.17 %
Unclassified	root	N/A	10.83 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	3.33 %
unclassified Actinophytocola	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → unclassified Actinophytocola	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.17 %
Unclassified	root	N/A	10.83 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	3.33 %
Actinophytocola sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → unclassified Actinophytocola → Actinophytocola sp.	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_26456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3065	Open in IMG/M
3300000956\|JGI10216J12902_101482621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300002568\|C688J35102_119580450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300004479\|Ga0062595_100011434	All Organisms → cellular organisms → Bacteria	2949	Open in IMG/M
3300005146\|Ga0066817_1005411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300005164\|Ga0066815_10002193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1792	Open in IMG/M
3300005330\|Ga0070690_100009140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5734	Open in IMG/M
3300005353\|Ga0070669_100159629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1751	Open in IMG/M
3300005435\|Ga0070714_101446372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300005440\|Ga0070705_101792331	Not Available	520	Open in IMG/M
3300005451\|Ga0066681_10314826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	959	Open in IMG/M
3300005458\|Ga0070681_10860883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300005466\|Ga0070685_10549651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300005518\|Ga0070699_101594217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300005518\|Ga0070699_101808105	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005841\|Ga0068863_100629428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1063	Open in IMG/M
3300006032\|Ga0066696_11117344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300006034\|Ga0066656_10472019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300006046\|Ga0066652_101324740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300006046\|Ga0066652_101757411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300006575\|Ga0074053_10007586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300006581\|Ga0074048_13340422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300006605\|Ga0074057_10013741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1945	Open in IMG/M
3300006854\|Ga0075425_101386549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300007255\|Ga0099791_10266628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300009012\|Ga0066710_101664232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	973	Open in IMG/M
3300009090\|Ga0099827_10829809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300009176\|Ga0105242_11226314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300009177\|Ga0105248_10097502	All Organisms → cellular organisms → Bacteria	3312	Open in IMG/M
3300009789\|Ga0126307_11041706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300009811\|Ga0105084_1103206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010045\|Ga0126311_10269225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1271	Open in IMG/M
3300010046\|Ga0126384_10152613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1780	Open in IMG/M
3300010336\|Ga0134071_10369195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300010397\|Ga0134124_12463312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300010400\|Ga0134122_11570042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300010403\|Ga0134123_10024354	All Organisms → cellular organisms → Bacteria	4327	Open in IMG/M
3300011269\|Ga0137392_10818923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300011270\|Ga0137391_10604886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300012198\|Ga0137364_10764571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300012199\|Ga0137383_10862972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300012200\|Ga0137382_10033736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	3083	Open in IMG/M
3300012200\|Ga0137382_10057480	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300012200\|Ga0137382_11095579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300012206\|Ga0137380_11484067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300012207\|Ga0137381_10408121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1185	Open in IMG/M
3300012207\|Ga0137381_10880680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300012211\|Ga0137377_10987237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300012212\|Ga0150985_104127885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300012349\|Ga0137387_10278241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1209	Open in IMG/M
3300012362\|Ga0137361_10506074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300012362\|Ga0137361_10723371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300012901\|Ga0157288_10336355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012907\|Ga0157283_10073307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300012913\|Ga0157298_10057181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300012930\|Ga0137407_11107306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300012944\|Ga0137410_11203392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300012951\|Ga0164300_10977546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012955\|Ga0164298_10249324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300012958\|Ga0164299_10172281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1221	Open in IMG/M
3300012961\|Ga0164302_10681604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300012985\|Ga0164308_11709418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300012988\|Ga0164306_11267253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300013765\|Ga0120172_1095051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300014054\|Ga0120135_1006042	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300014056\|Ga0120125_1107873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300015359\|Ga0134085_10418987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300017997\|Ga0184610_1282565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300018061\|Ga0184619_10052791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1771	Open in IMG/M
3300018468\|Ga0066662_12344245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300019789\|Ga0137408_1026730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300020002\|Ga0193730_1171788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300021080\|Ga0210382_10224552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300025885\|Ga0207653_10070338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1195	Open in IMG/M
3300025921\|Ga0207652_10625941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300025926\|Ga0207659_10106531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	2123	Open in IMG/M
3300025932\|Ga0207690_10706427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300025934\|Ga0207686_11723789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300025961\|Ga0207712_10049761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	2923	Open in IMG/M
3300026088\|Ga0207641_11685287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300026121\|Ga0207683_10735999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300026523\|Ga0209808_1318813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300027821\|Ga0209811_10291742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300028711\|Ga0307293_10172717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300028712\|Ga0307285_10004996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2678	Open in IMG/M
3300028715\|Ga0307313_10047680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300028716\|Ga0307311_10095082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300028719\|Ga0307301_10113825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300028744\|Ga0307318_10000790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	10441	Open in IMG/M
3300028768\|Ga0307280_10387233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300028771\|Ga0307320_10000264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19065	Open in IMG/M
3300028778\|Ga0307288_10100727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1052	Open in IMG/M
3300028784\|Ga0307282_10548534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → unclassified Actinophytocola → Actinophytocola sp.	561	Open in IMG/M
3300028787\|Ga0307323_10028542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1932	Open in IMG/M
3300028787\|Ga0307323_10126193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300028793\|Ga0307299_10129679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300028803\|Ga0307281_10146009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300028807\|Ga0307305_10100397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1337	Open in IMG/M
3300028807\|Ga0307305_10428644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300028811\|Ga0307292_10515392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300028819\|Ga0307296_10019246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	3590	Open in IMG/M
3300028819\|Ga0307296_10434045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300028824\|Ga0307310_10115811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1207	Open in IMG/M
3300028876\|Ga0307286_10200907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300028880\|Ga0307300_10007963	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300031199\|Ga0307495_10018508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1145	Open in IMG/M
3300031740\|Ga0307468_101046169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300032180\|Ga0307471_104293140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.33%
Host-Associated	Host-Associated	11.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.17%
Plants	Host-Associated → Plants	11.67%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.00%
Sediment	Environmental → Aquatic → Sediment	3.33%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.17%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	60.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00038130	2199352025	Soil	VPPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIDERDRELTRLRVLRAS
JGI10216J12902_1014826212	3300000956	Soil	EIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVMRAS*
A2165W6_12245911	3300001334	Permafrost	KLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTRLRVIRAS*
C688J35102_1195804502	3300002568	Soil	DPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0062595_1000114341	3300004479	Soil	APAPELLHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIDERDRELTRLRVLRAS*
Ga0066817_10054112	3300005146	Soil	PPPAAAEPVLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0066815_100021931	3300005164	Soil	PAPAPPPAAAEPVLIHDPEIRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0070690_1000091406	3300005330	Switchgrass Rhizosphere	PAAAPVPPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0068869_1015223921	3300005334	Miscanthus Rhizosphere	LHSVEALLKERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0070669_1001596291	3300005353	Switchgrass Rhizosphere	AEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0070714_1014463722	3300005435	Agricultural Soil	APVPPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0070705_1017923312	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RDEDPEEKLHSVEALLMERQRAFIELVATAETLRMKVQRLEDMLEERTREIARLRASRVAS*
Ga0066681_103148262	3300005451	Soil	PSVFMASDERLLSIEALLKERQRAFIEMVTTTETLRMKIARLEEILEERDRELAKLRIARAV*
Ga0070681_108608831	3300005458	Corn Rhizosphere	EPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0070685_105496511	3300005466	Switchgrass Rhizosphere	PPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0070699_1015942172	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PRAPDTDEAKLLSIEALLKERQRAFIELVTTAETLRMKVARLEEILDERDKELTRLRILRAS*
Ga0070699_1018081051	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DPAQEDQETKLQSVEALLRERQRAFIELVTTTETLRMKVARLEEILEERDRELTRLRVMQAG*
Ga0068866_100062215	3300005718	Miscanthus Rhizosphere	LHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0068863_1006294281	3300005841	Switchgrass Rhizosphere	PIPVPTPVVVAAPAPVAPELIRDPEIKLHSVEALLKERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0066696_111173442	3300006032	Soil	TPFESPELKLHSVEAMLRERQRAFIELVTTTETLRMKIARLEEILEERDRELTRLRVARAS*
Ga0066656_104720192	3300006034	Soil	ELKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVSRAS*
Ga0066652_1013247401	3300006046	Soil	APELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVMRAS*
Ga0066652_1017574111	3300006046	Soil	SDERLLSIEALLKERQRAFIEMVTTTETLRMKIARLEEILEERDRELAKLRIARAV*
Ga0074053_100075862	3300006575	Soil	EIRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0074048_133404222	3300006581	Soil	PPAAAEPVLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0074057_100137413	3300006605	Soil	TCARLAEDRASVVLVGRSRRSRPARPALPAPPPAAAEPVLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0075425_1013865492	3300006854	Populus Rhizosphere	PAPPAVMSSDEKLLSIEALLMERQRAFIEMVTTAETLRMKVARLEEILDERDRELAKLRIARAV*
Ga0099791_102666281	3300007255	Vadose Zone Soil	TPAPGAPTPAPFAPELIHDPEIKLHSVEALLRERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVARAAS*
Ga0066710_1016642321	3300009012	Grasslands Soil	LIQDPEIKLHSVEVLLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0099827_108298092	3300009090	Vadose Zone Soil	VAPAPAPVAPELIHDPEIRLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVSRAVS*
Ga0105242_112263141	3300009176	Miscanthus Rhizosphere	VAPPAPAAPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0105248_100975021	3300009177	Switchgrass Rhizosphere	EIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0126307_110417062	3300009789	Serpentine Soil	APSPAPQETHLLQLKPKPVSPAQPEVQPFTPDPVNDPEARLLSVEALLRERQRAFIELVTTTETLRMKVTRLEEILEERDRELARLRVLRAS*
Ga0105084_11032062	3300009811	Groundwater Sand	EDPESKLHSVEAMLRERQRAFIELFTTAETLRMKVARLEEILEERDRELTRLRVLRAS*
Ga0126311_102692252	3300010045	Serpentine Soil	PPEPPMSADEKLLSIEALLKERQRAFIEMVTTTETLRMKVARLEEILEERDRELAKLRIARAV*
Ga0126384_101526131	3300010046	Tropical Forest Soil	IISSDEKLLSIEALLKERQRAFIEMVTTAETLRMKVARLEEILEERDRELARLRIARAV*
Ga0134071_103691952	3300010336	Grasslands Soil	VAPELLHDPELKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVSRAS*
Ga0134124_124633121	3300010397	Terrestrial Soil	APPPAPAAPELIRDPEIKLHSVEALLKERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0134122_115700421	3300010400	Terrestrial Soil	VAPPPAPASPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0134123_100243544	3300010403	Terrestrial Soil	APAPIQPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0137392_108189232	3300011269	Vadose Zone Soil	MPVAPAAAPVAPQLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAS*
Ga0137391_106048861	3300011270	Vadose Zone Soil	DPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAS*
Ga0137364_107645711	3300012198	Vadose Zone Soil	APVAPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0137383_108629722	3300012199	Vadose Zone Soil	ELLHDPEIRLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVSRAS*
Ga0137382_100337361	3300012200	Vadose Zone Soil	VPVAPPPAPVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAAS*
Ga0137382_100574801	3300012200	Vadose Zone Soil	MPVAPAAAPVAPAAAPVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVARAS*
Ga0137382_110955792	3300012200	Vadose Zone Soil	IHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVSRAS*
Ga0137374_100529401	3300012204	Vadose Zone Soil	EKLHSIEALLKERQRAFIELFTTAETLRMKVARLEEILDERDRELTRLRVLRAS*
Ga0137380_114840671	3300012206	Vadose Zone Soil	DPEAKLESIEALLKERQRAFIELFTTAETLRMKLQRLEEILDERDRELTRLRVIRAS*
Ga0137381_104081212	3300012207	Vadose Zone Soil	AVSSPAPAPVAVAPPAPVAPSLIQDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0137381_108806802	3300012207	Vadose Zone Soil	VPVAVPVAPPPARVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAAS*
Ga0137377_109872372	3300012211	Vadose Zone Soil	VAPQLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVSRAS*
Ga0150985_1041278851	3300012212	Avena Fatua Rhizosphere	PPPALAPPAAAEPALMYDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS*
Ga0137387_102782412	3300012349	Vadose Zone Soil	VAVAPPAPVAPNLIQDPEIKLHSVEVLLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVMRAS*
Ga0137361_105060742	3300012362	Vadose Zone Soil	DPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVSRAS*
Ga0137361_107233712	3300012362	Vadose Zone Soil	MPVAPAPAPVSPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAAS*
Ga0137373_100658941	3300012532	Vadose Zone Soil	DPEMKLLSVEALLRERQRAFIELVATAETLRMKVQRLEDMLEERTREIARLRSSRVA*
Ga0157288_103363552	3300012901	Soil	RDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0157283_100733072	3300012907	Soil	LIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0157298_100571812	3300012913	Soil	PPVPVAVATPSAPVAPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0137407_111073062	3300012930	Vadose Zone Soil	PAPEAPTPAPVAPELIHDPEIKLHSVEALLRERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAAS*
Ga0137410_112033921	3300012944	Vadose Zone Soil	AIAPNLIQDPEIKLHSVEVLLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0164300_109775462	3300012951	Soil	AAPAPVAPELIRDPEVKLHSVEALLKERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0164298_102493241	3300012955	Soil	SPVAPELIRDPEIKLHSVEALLKERQRAFIELATTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0164299_101722812	3300012958	Soil	VAPPPAAAAPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0164302_106816041	3300012961	Soil	IPAPAPVVAAAPAPVAPELIRDPEIPLHSVEVLLKERQRAFIELVTTTETLRIMVAHLEEIIDERDRELTKLRVMRAS*
Ga0164308_117094181	3300012985	Soil	APIPAPTPVVVAAPAPVAPELIRDPEVKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0164306_112672532	3300012988	Soil	PTPVVVAAPAPVAPELIRDPEVKLHSVEALLKERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0120172_10950511	3300013765	Permafrost	VAVPPAAPVAPSQIQDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS*
Ga0120126_10096552	3300013831	Permafrost	LHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTKLRVLRAG*
Ga0120135_10060421	3300014054	Permafrost	PAPQPAAPELLHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTKLRVLRAG*
Ga0120125_11078732	3300014056	Permafrost	VPAPAPVAPELIHDPEIRLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVSRAS*
Ga0134085_104189871	3300015359	Grasslands Soil	APTVPVIGNDEKLLSIEALLKERQRAFIELVTTAETLRMKVARLEEILDERDRELTRLRVLRAS*
Ga0187776_101767651	3300017966	Tropical Peatland	LLSVEALLRERQRAFIELVTTAETLRMKVARLEEILEERDRELAKLRIARAV
Ga0184610_12825652	3300017997	Groundwater Sediment	LPERPAAPDPLEDPQVRLLSVEALLRERQRAFIELVTTTETLRMKVTRLEEILEERDRELTRLRVIRAS
Ga0184626_101907461	3300018053	Groundwater Sediment	VRLLSVEALLRERQRAFIELVTTTETLRMKVTRLEEILEERDRELTRLRVIRAS
Ga0184621_100601313	3300018054	Groundwater Sediment	DPEIKLHNVETMLRDRQRAFIELVGTAETLRSKVAWLEDQLEERNRELARLRLRAI
Ga0184619_100527912	3300018061	Groundwater Sediment	VAAPAPVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0066662_123442452	3300018468	Grasslands Soil	APAAAPVAPQLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAS
Ga0137408_10267302	3300019789	Vadose Zone Soil	PAPVAPAPAPVAPQLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVSRAS
Ga0193730_11717882	3300020002	Soil	DPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVSRAS
Ga0210382_102245522	3300021080	Groundwater Sediment	LIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVMRAS
Ga0207653_100703381	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	PPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0207652_106259412	3300025921	Corn Rhizosphere	MSSEEKLLSIEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0207659_101065313	3300025926	Miscanthus Rhizosphere	AEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0207690_107064272	3300025932	Corn Rhizosphere	DPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0207686_117237891	3300025934	Miscanthus Rhizosphere	PPVPVAVAPPAPAAPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0207712_100497611	3300025961	Switchgrass Rhizosphere	AAAPVPPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0207641_116852872	3300026088	Switchgrass Rhizosphere	VPPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0207683_107359992	3300026121	Miscanthus Rhizosphere	PAPIPAPTPVVVAAPAPAAPELIRDPEIKLHSVEALLKERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0209808_13188131	3300026523	Soil	DDPEEKVLQIEALLKERQRAFIELVTTAETLRAKIARLEEMVEDRDRELNKLRVVRAS
Ga0209811_102917422	3300027821	Surface Soil	IPAPTPVVVAAPAPVAPELIRDPEIKLHSVEALLKERQRAFIELVTITETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0307322_101439151	3300028710	Soil	RLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307293_101727171	3300028711	Soil	PVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0307285_100049963	3300028712	Soil	APVPAPAPPAAEPFLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307313_100476802	3300028715	Soil	DPEIKLQSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVMRAS
Ga0307311_100950821	3300028716	Soil	APVAPQLIQDPEIKLQSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVSRAS
Ga0307307_100086651	3300028718	Soil	DEKLLSIEALLKERQRAFIELVTTAETLRMKVARLEEILDERDRELTKLRIARAS
Ga0307301_101138251	3300028719	Soil	PAPVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVMRAS
Ga0307318_100007901	3300028744	Soil	IHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307280_103872331	3300028768	Soil	LIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307320_1000026420	3300028771	Soil	PAPVAPQLIQDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVSRAS
Ga0307288_101007272	3300028778	Soil	PEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307282_105485342	3300028784	Soil	VAVAPPAPVAPSLIQDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0307323_100285422	3300028787	Soil	PVISGDERLLSIEALLKERQRAFIELVTTAETLRMKVARLEEILDERDRELTRLRVLRAS
Ga0307323_101261932	3300028787	Soil	PPVISGDERLLSIEALLKERQRAFIELVTTAETLRMKVARLEEILDERDRELTKLRIARA
Ga0307290_102090491	3300028791	Soil	ELKLHSIEALLKERQRAFIELVTTTETLRMKVAHLEEILEERDRELTKLRVLRAS
Ga0307299_101296792	3300028793	Soil	APELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0307281_101460093	3300028803	Soil	PAPVAVTAPAPVAPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0307305_101003972	3300028807	Soil	NDEKLLSIEALLKERQRAFIELVTTAETLRMKVARLEEILDERDRELTRLRVLRAS
Ga0307305_104286442	3300028807	Soil	APVAVAAPAPVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVMRAS
Ga0307292_105153921	3300028811	Soil	APVAPAPAPVAPQLIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVSRAS
Ga0307296_100192461	3300028819	Soil	VLPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307296_104340452	3300028819	Soil	VPAPVLPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307310_101158111	3300028824	Soil	PAPAPVLPPAAAEPVLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307286_102009072	3300028876	Soil	VLIHDPENRLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRA
Ga0307300_100079633	3300028880	Soil	APQLIQDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEQRDRELTKLRVSRAS
Ga0307495_100185082	3300031199	Soil	VAPPPAPAAPELIRDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIDERDRELTKLRVMRAS
Ga0307468_1010461692	3300031740	Hardwood Forest Soil	LIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVARLEEIIEERDRELTRLRVLRAS
Ga0307471_1042931402	3300032180	Hardwood Forest Soil	APMPVAPAAAPVAPELIHDPEIKLHSVEALLKERQRAFIELVTTTETLRMKVAHLEEIIEERDRELTKLRVARAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences