NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F073515

Metagenome / Metatranscriptome Family F073515

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073515
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 87 residues
Representative Sequence MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS
Number of Associated Samples 96
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 71.67 %
% of genes near scaffold ends (potentially truncated) 35.83 %
% of genes from short scaffolds (< 2000 bps) 86.67 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (50.833 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.833 % of family members)
Environment Ontology (ENVO) Unclassified
(40.833 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.833 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104
1JGI10216J12902_1083550732
2Ga0055471_100488092
3Ga0055467_100043074
4Ga0055465_101274461
5Ga0063356_1062392842
6Ga0062592_1001278803
7Ga0062594_1004981832
8Ga0062594_1012041462
9Ga0062594_1020760931
10Ga0070658_115391961
11Ga0070683_1000277435
12Ga0070683_1004304442
13Ga0070682_1005703152
14Ga0070682_1011331881
15Ga0068868_1007524341
16Ga0070660_1007273932
17Ga0070687_1001667872
18Ga0070692_100539312
19Ga0070692_103544932
20Ga0070692_107662752
21Ga0070669_1005551231
22Ga0070675_1003521042
23Ga0070675_1015450011
24Ga0070688_1000838552
25Ga0070700_1002448702
26Ga0070700_1016047972
27Ga0070663_1005738832
28Ga0070662_1001171701
29Ga0070681_102968991
30Ga0070681_111005661
31Ga0068867_1008961431
32Ga0070684_1000364834
33Ga0070695_1011281362
34Ga0070696_1017889431
35Ga0068855_1019299751
36Ga0068857_1006446232
37Ga0070702_1017742102
38Ga0068852_1020927852
39Ga0068861_1003062542
40Ga0068870_101909971
41Ga0068860_1004147902
42Ga0068862_1007716591
43Ga0075288_10665692
44Ga0075289_10548121
45Ga0074047_119693843
46Ga0074048_127946151
47Ga0075434_1006120212
48Ga0079218_108899901
49Ga0111538_116645402
50Ga0105241_110716611
51Ga0105242_114089282
52Ga0105248_113932242
53Ga0105248_116592532
54Ga0105239_102215991
55Ga0134127_104716051
56Ga0157285_102423283
57Ga0157296_101107461
58Ga0157283_103264902
59Ga0157286_103490062
60Ga0157302_104192981
61Ga0164241_100250396
62Ga0164241_100264582
63Ga0164241_100509923
64Ga0164241_103176121
65Ga0164303_113223642
66Ga0164308_101263023
67Ga0164308_114850451
68Ga0157373_112897321
69Ga0157375_103137263
70Ga0157375_116784661
71Ga0157375_133287621
72Ga0075320_10309063
73Ga0163163_125075101
74Ga0132258_117947412
75Ga0132256_1017972052
76Ga0132255_1002636434
77Ga0190266_111915301
78Ga0190274_102730171
79Ga0190274_133010041
80Ga0190271_102416174
81Ga0190271_120400601
82Ga0173481_106641792
83Ga0206356_118370632
84Ga0247788_10104532
85Ga0210115_10108613
86Ga0207642_103233892
87Ga0207643_108833892
88Ga0207654_111500262
89Ga0207707_100725202
90Ga0207657_100856834
91Ga0207687_100771733
92Ga0207670_104145132
93Ga0207669_115315351
94Ga0207679_100670283
95Ga0207658_102303732
96Ga0207703_114739781
97Ga0207678_102211682
98Ga0207702_114436121
99Ga0207648_103543301
100Ga0207648_103765902
101Ga0207674_115034121
102Ga0268265_105573571
103Ga0268264_117029141
104Ga0247818_103075462
105Ga0247818_113393271
106Ga0247818_113731091
107Ga0247822_111023721
108Ga0247824_101156031
109Ga0247825_101802434
110Ga0247825_103612991
111Ga0247825_103962592
112Ga0247826_101974352
113Ga0247826_103853812
114Ga0307497_101811392
115Ga0310887_110611762
116Ga0310907_106441961
117Ga0308175_1016147811
118Ga0307416_1017302951
119Ga0310890_110473001
120Ga0247830_107755971
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.61%    β-sheet: 0.00%    Coil/Unstructured: 53.39%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPSSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
49.2%50.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Natural And Restored Wetlands
Soil
Soil
Terrestrial Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Agricultural Soil
Soil
Soil
Natural And Restored Wetlands
Rice Paddy Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
3.3%15.8%3.3%12.5%6.7%6.7%4.2%5.0%5.8%5.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10835507323300000956SoilMKLKYTRTDRLSSEEREIVDRFERGVIDAAEAGRLLIASVKYVGQEDAASVDEGRPRAEETDASPDEAPDEAEARILVERLAQEVYGDPT*
Ga0055471_1004880923300003987Natural And Restored WetlandsMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVHAVQHDAASSGEDEAGTEHTEAAPLDETSEEAKARALVERIARDVYDDPS*
Ga0055467_1000430743300003996Natural And Restored WetlandsMKFKPKRTDRLSPQEREIVDRFERGVIDASEAGRLLIDSVDSVRAEASASADEGGRETVETDAAPDETPEEAKARALVERIAQDVYDDPA*
Ga0055465_1012744613300004013Natural And Restored WetlandsMKFKPKRTDRLSPQEREIVDRFERGVIDASEAGRLLIDSVDSVRAEASASADERGRETVETDAAPDETPEEARARALVERIAQDVYDDPA*
Ga0063356_10623928423300004463Arabidopsis Thaliana RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0062592_10012788033300004480SoilMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA*
Ga0062594_10049818323300005093SoilEREIVDRFERGVIDATEAGQLLIASVHPGRHEAGSMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0062594_10120414623300005093SoilDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS*
Ga0062594_10207609313300005093SoilRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAPSVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA*
Ga0070658_1153919613300005327Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIA
Ga0070683_10002774353300005329Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS*
Ga0070683_10043044423300005329Corn RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEVASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA*
Ga0070682_10057031523300005337Corn RhizosphereEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070682_10113318813300005337Corn RhizosphereSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA*
Ga0068868_10075243413300005338Miscanthus RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0070660_10072739323300005339Corn RhizosphereDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070687_10016678723300005343Switchgrass RhizosphereFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAGSMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070692_1005393123300005345Corn, Switchgrass And Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0070692_1035449323300005345Corn, Switchgrass And Miscanthus RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMVESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0070692_1076627523300005345Corn, Switchgrass And Miscanthus RhizosphereLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA*
Ga0070669_10055512313300005353Switchgrass RhizosphereSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRQEATAVDESGPGAEETEASPDETPEEAKARALIERIARETYDDPA*
Ga0070675_10035210423300005354Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSA*
Ga0070675_10154500113300005354Miscanthus RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARET
Ga0070688_10008385523300005365Switchgrass RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070700_10024487023300005441Corn, Switchgrass And Miscanthus RhizosphereKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070700_10160479723300005441Corn, Switchgrass And Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA*
Ga0070663_10057388323300005455Corn RhizosphereMRFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0070662_10011717013300005457Corn RhizosphereREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA*
Ga0070681_1029689913300005458Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0070681_1110056613300005458Corn RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERI
Ga0068867_10089614313300005459Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIAR
Ga0070684_10003648343300005535Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHQAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS*
Ga0070695_10112813623300005545Corn, Switchgrass And Miscanthus RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0070696_10178894313300005546Corn, Switchgrass And Miscanthus RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEEGEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0068855_10192997513300005563Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVE
Ga0068857_10064462323300005577Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0070702_10177421023300005615Corn, Switchgrass And Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA*
Ga0068852_10209278523300005616Corn RhizosphereRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0068861_10030625423300005719Switchgrass RhizosphereMKFKPGRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA*
Ga0068870_1019099713300005840Miscanthus RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIA
Ga0068860_10041479023300005843Switchgrass RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0068862_10077165913300005844Switchgrass RhizosphereGRHMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSA*
Ga0075288_106656923300005874Rice Paddy SoilMKLRPTRTDRLSPAEREIVDRFERGLIDAAEAGRLLIASVHSVRHGTAASVDEKEASTEETDAAPRGETPEEAEARALVERIARDVYDDST*
Ga0075289_105481213300005888Rice Paddy SoilMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVHAVQHDAASLGEDEAGTEHTEAAPLDETSEEAKARALVERIARDVYDDPS*
Ga0074047_1196938433300006576SoilMKFKPARSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSGRHEATSVDERGSGAEETEAASPDETPEEATARALIERIAREAYDDPA*
Ga0074048_1279461513300006581SoilMKFKPARSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSGRHEATSVDERGPAAEETEAASPDETPEEATARALIERIAREAYDDPA*
Ga0075434_10061202123300006871Populus RhizosphereSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA*
Ga0079218_1088999013300007004Agricultural SoilEEREIVDRFERGVIDAAEAGRLLIASVQPARHAAAAPVGESGPVTEEIDAAPGETPEEAKARALVESIAREVYDDRA*
Ga0111538_1166454023300009156Populus RhizosphereMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA*
Ga0105241_1107166113300009174Corn RhizosphereMKLKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0105242_1140892823300009176Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIHAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG*
Ga0105248_1139322423300009177Switchgrass RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKA
Ga0105248_1165925323300009177Switchgrass RhizosphereMKFKPARADRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRQEATAVDESGPGAEETEASPDETPEEAKARALIERIARETYDDPA*
Ga0105239_1022159913300010375Corn RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG*
Ga0134127_1047160513300010399Terrestrial SoilERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0157285_1024232833300012897SoilMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDE
Ga0157296_1011074613300012905SoilMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0157283_1032649023300012907SoilMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHYVRQEAAALVDQGRPGAEETDAATDEAPDEAEARILVERLAQEVYGDPA*
Ga0157286_1034900623300012908SoilMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSAPHEAAASVAESGPGTDETSAAPGETPEEAKARALIESIAREVYDDPA*
Ga0157302_1041929813300012915SoilRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0164241_1002503963300012943SoilMKFKSTRTDRLSPEEREIVDRFERGEIDAAEAGRRLIASVHFIRDEPAASVDDGGADPEETDTPPDETPEEERARVIVERLAREAYDDPA*
Ga0164241_1002645823300012943SoilMKLKHTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHYVRQEAAASVDQGRPGAEETDAATDEAPDEAEARVLVERLAQEVYGDPA*
Ga0164241_1005099233300012943SoilVKFKPARADRLSPEEREIVDRFERGVIDAAEAGRLLVASVESVRHEAAASVDESGPGADETGAAPDETSEEARARAIIERLAREAYDDPPDSGSAGR*
Ga0164241_1031761213300012943SoilMKFKSTRTDRLSPEEREIVDRFERGAIDAAEAGRLLIESVAAVRDEPAGADEGEAGTEQTDAAPPDETPEEAKARELVERIARDVYDESS*
Ga0164303_1132236423300012957SoilPEEREIVDRFERGVIDAAEAGRLLIASVQPGRNEATSVDESGPGADETEASPDETPEEAKARALIERIAREAYDDPA*
Ga0164308_1012630233300012985SoilMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIAR
Ga0164308_1148504513300012985SoilMRFKPERSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSGRHEATSVDERGPAAEETEAASPDETPEEATARALIERIAREAYDDPA*
Ga0157373_1128973213300013100Corn RhizosphereTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERSARDVYDQSA*
Ga0157375_1031372633300013308Miscanthus RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTEASPLDETSEEAKARELVERIARDVYDEPS*
Ga0157375_1167846613300013308Miscanthus RhizosphereVKIKPERRDRLSPVEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHPAEEIDVSLDETPEEATARALVERIAREAYDDPV*
Ga0157375_1332876213300013308Miscanthus RhizosphereRSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEATSVDERGPEAEETETSPDEAPEEAKARALIERIAREAYDDPG*
Ga0075320_103090633300014255Natural And Restored WetlandsMKFRPTRTDRLSPVKREIVDQFERGVIDAAEAGRLLIASVHLVRHEAAVSVDESGPVNEESDAGPNETPEEAKARALVERIARDAYDDPA*
Ga0163163_1250751013300014325Switchgrass RhizosphereMKFKPARSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEATSVDERGPEAEETETSPDEAPEEAKARALIERIARETYDDPA*
Ga0132258_1179474123300015371Arabidopsis RhizosphereVKIKPERRDRLSPVEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHRAEEIDVSLDETPEEATARALVERIAREAYDDPV*
Ga0132256_10179720523300015372Arabidopsis RhizosphereMRFKPTRTDRLSPQEREIVDRFERGAIDATEAGRLLIASATPVAREAEATPTDEAEPTDADAAAPDETPEEAKARELVERIAQDVYDSA*
Ga0132255_10026364343300015374Arabidopsis RhizosphereMRFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0190266_1119153013300017965SoilMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAATSVGESGPVTEETDAAPGETPEEAKARALIESIAREVYDDPA
Ga0190274_1027301713300018476SoilPKEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA
Ga0190274_1330100413300018476SoilMKFKPGRTDRLSPEERGIVDRFERGVIDAAEAGRLLIASVQPARNEAAASVDESGPVTEEIDAAPGETPEEAKARALVESIAREVYDDRA
Ga0190271_1024161743300018481SoilFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVIDEIDVAPGETPEEAKARALVESIAREVYDDRA
Ga0190271_1204006013300018481SoilEREIVDRFERGVIDAAEAGRLLIASVQPARQEAAASVDESGSVTDEAVAAPDETTEEAKARALIESIAREVYDDPA
Ga0173481_1066417923300019356SoilMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0206356_1183706323300020070Corn, Switchgrass And Miscanthus RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDEPS
Ga0247788_101045323300022901SoilMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA
Ga0210115_101086133300025791Natural And Restored WetlandsMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVHAVQHDAASLGEDEAGTEHTEAAPLDETSEEAKARALVERIARDVYDDPS
Ga0207642_1032338923300025899Miscanthus RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGQLLIASVHPGRHEAGSMEESEPEAEESGASQGETPEEAKARALIERIARETYDTPA
Ga0207643_1088338923300025908Miscanthus RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDEPS
Ga0207654_1115002623300025911Corn RhizospherePEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0207707_1007252023300025912Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0207657_1008568343300025919Corn RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA
Ga0207687_1007717333300025927Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSG
Ga0207670_1041451323300025936Switchgrass RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0207669_1153153513300025937Miscanthus RhizosphereMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA
Ga0207679_1006702833300025945Corn RhizosphereMKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS
Ga0207658_1023037323300025986Switchgrass RhizospherePERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA
Ga0207703_1147397813300026035Switchgrass RhizosphereMKLKPERSDRLSPEEREIVDRFERGVIDATEAGRLVIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0207678_1022116823300026067Corn RhizosphereMRFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0207702_1144361213300026078Corn RhizosphereRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0207648_1035433013300026089Miscanthus RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA
Ga0207648_1037659023300026089Miscanthus RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG
Ga0207674_1150341213300026116Corn RhizosphereMKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGGHEVASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0268265_1055735713300028380Switchgrass RhizosphereGRHMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSA
Ga0268264_1170291413300028381Switchgrass RhizosphereMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA
Ga0247818_1030754623300028589SoilMKFKPGRTDRLSPKEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVPEEIDVAPGETPEEAKARALVESIAREVYDDRA
Ga0247818_1133932713300028589SoilVKIKPERRDRLSQVEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHRAEEIDVSLDETPEEATARALVERIAREA
Ga0247818_1137310913300028589SoilMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSARHEAAAAVGESGPMTVEVEVEAAPGETPEEAKARALIESIAREVYDDPA
Ga0247822_1110237213300028592SoilMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERG
Ga0247824_1011560313300028809SoilMRFKSTRTDRLSPEEREIVERFERGEIHAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA
Ga0247825_1018024343300028812SoilMKLKPGRTDRLSPQEREIVDRFERGVIDAAEAGRLLIASAQPARHEAAASVDESGPATEADALPGETPEEAKARALVESIARE
Ga0247825_1036129913300028812SoilMRFKSTRTDRLSPEEREIVERFERGEIHAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG
Ga0247825_1039625923300028812SoilMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSARHEAAAAVGESGPMTVEVEAAPGETPEEAKARALIESIAREVYDDPA
Ga0247826_1019743523300030336SoilMKLKPGRTDRLSPQEREIVDRFERGVIDAAEAGRLLIASAQPARHEAAASVDESGPATEADALPGETPEEAKARALVESIAREVYDDRP
Ga0247826_1038538123300030336SoilMRFKSTRTDRFSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA
Ga0307497_1018113923300031226SoilMKFKPARSDRLSPEEREIVDRFERGVIGAVEAGRLLIASVHPGRHEATPVDESGPGAEETEASPDETPEEAKARALIERIARETYDDPT
Ga0310887_1106117623300031547SoilMKFKPGRTDRLSPKEREIVDRFERGVIDAAEAGRLLIASVQPARQEAAASVVESGSVTEEIDVAPGETPEEAKARALVESIAREVYEDRA
Ga0310907_1064419613300031847SoilMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVHDQSA
Ga0308175_10161478113300031938SoilMKLKHTRTDRLSPEEREIVDRFERGVIDASEAGRLLIDSVNAVRHEAASVGADDAESDRPDGAPLDETSEEAKARALVERIARDVYDDPS
Ga0307416_10173029513300032002RhizosphereCMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAPSVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA
Ga0310890_1104730013300032075SoilVKIKPERRDRLSPLEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHRAEEIDVSLDETPEEATARALVERIAREAYDDPV
Ga0247830_1077559713300033551SoilMKLKPGRTDRLSPQEREIVDRFERGVIDAAEAGRLLIASAQPARHEAAASVDESGPATEADALPGETPEEAEARALVESIAREVYDDRP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.