Metagenome / Metatranscriptome Family F073423

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073423
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	48 residues
Representative Sequence	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVNKDILKTEGY
Number of Associated Samples	101
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.16 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (23.333 % of family members)
Environment Ontology (ENVO)	Unclassified (58.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.33% β-sheet: 12.00% Coil/Unstructured: 82.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04851	ResIII	2.50
PF00271	Helicase_C	1.67
PF13847	Methyltransf_31	0.83
PF00730	HhH-GPD	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.83
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.83
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.83
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.83
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Viruses	superkingdom	All Organisms → Viruses	26.67 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Spirotrichea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Hypotrichia	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Hypotrichia	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Euplotida	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Hypotrichia → Euplotida	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Euplotidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Hypotrichia → Euplotida → Euplotidae	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Euplotes	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Hypotrichia → Euplotida → Euplotidae → Euplotes	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.67 %
Unclassified	root	N/A	6.67 %
Euplotes harpa	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Hypotrichia → Euplotida → Euplotidae → Euplotes → Euplotes harpa	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10102477	All Organisms → Viruses → Predicted Viral	1045	Open in IMG/M
3300000117\|DelMOWin2010_c10149192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300000117\|DelMOWin2010_c10258827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300001460\|JGI24003J15210_10058917	All Organisms → Viruses → Predicted Viral	1245	Open in IMG/M
3300001460\|JGI24003J15210_10179964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300002231\|KVRMV2_101764177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300006027\|Ga0075462_10066825	All Organisms → Viruses → Predicted Viral	1133	Open in IMG/M
3300006737\|Ga0098037_1304119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300006749\|Ga0098042_1168733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300006802\|Ga0070749_10687531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300006870\|Ga0075479_10340308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300006922\|Ga0098045_1001478	Not Available	8477	Open in IMG/M
3300006990\|Ga0098046_1075160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300007346\|Ga0070753_1353830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300007538\|Ga0099851_1218366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300007778\|Ga0102954_1124988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300007960\|Ga0099850_1179571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300009000\|Ga0102960_1066485	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300009001\|Ga0102963_1391323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300009071\|Ga0115566_10112085	Not Available	1741	Open in IMG/M
3300009445\|Ga0115553_1233016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300009449\|Ga0115558_1401211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300009472\|Ga0115554_1122470	All Organisms → Viruses → Predicted Viral	1091	Open in IMG/M
3300009497\|Ga0115569_10359485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300010153\|Ga0098059_1075831	All Organisms → Viruses → Predicted Viral	1343	Open in IMG/M
3300010297\|Ga0129345_1102787	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300010299\|Ga0129342_1227390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300010368\|Ga0129324_10043493	Not Available	2082	Open in IMG/M
3300010368\|Ga0129324_10234300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300012954\|Ga0163111_10568762	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300013188\|Ga0116834_1022401	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
3300013253\|Ga0116813_1062994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300016747\|Ga0182078_10904315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300016762\|Ga0182084_1152133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300016797\|Ga0182090_1349641	All Organisms → Viruses → Predicted Viral	1358	Open in IMG/M
3300016797\|Ga0182090_1505811	All Organisms → Viruses → Predicted Viral	1388	Open in IMG/M
3300017697\|Ga0180120_10202360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300017697\|Ga0180120_10246710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300017714\|Ga0181412_1131097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300017724\|Ga0181388_1147716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300017734\|Ga0187222_1041811	All Organisms → Viruses → Predicted Viral	1079	Open in IMG/M
3300017734\|Ga0187222_1090831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300017739\|Ga0181433_1097445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300017741\|Ga0181421_1121855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300017742\|Ga0181399_1059485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	984	Open in IMG/M
3300017746\|Ga0181389_1047920	All Organisms → Viruses → Predicted Viral	1254	Open in IMG/M
3300017749\|Ga0181392_1228369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300017755\|Ga0181411_1068544	All Organisms → Viruses → Predicted Viral	1075	Open in IMG/M
3300017758\|Ga0181409_1009361	All Organisms → Viruses → Predicted Viral	3299	Open in IMG/M
3300017759\|Ga0181414_1140046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300017760\|Ga0181408_1028557	Not Available	1528	Open in IMG/M
3300017760\|Ga0181408_1126940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300017763\|Ga0181410_1140404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300017764\|Ga0181385_1127570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300017770\|Ga0187217_1302769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300017772\|Ga0181430_1140976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300017786\|Ga0181424_10056996	All Organisms → Viruses → Predicted Viral	1690	Open in IMG/M
3300017949\|Ga0181584_10148673	Not Available	1572	Open in IMG/M
3300017950\|Ga0181607_10147237	All Organisms → Viruses → Predicted Viral	1433	Open in IMG/M
3300017956\|Ga0181580_10451508	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Hypotrichia → Euplotida → Euplotidae → Euplotes → Euplotes harpa	847	Open in IMG/M
3300017958\|Ga0181582_10617331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300017969\|Ga0181585_10351638	All Organisms → Viruses → Predicted Viral	1015	Open in IMG/M
3300017986\|Ga0181569_11009504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300017987\|Ga0180431_11145217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300018041\|Ga0181601_10434400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300018413\|Ga0181560_10361128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300018420\|Ga0181563_10102389	All Organisms → Viruses → Predicted Viral	1872	Open in IMG/M
3300018420\|Ga0181563_10802894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300018424\|Ga0181591_10844226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300020056\|Ga0181574_10173042	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300020056\|Ga0181574_10658595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300020166\|Ga0206128_1299010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300020177\|Ga0181596_10114109	All Organisms → Viruses → Predicted Viral	1329	Open in IMG/M
3300020178\|Ga0181599_1249300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300020189\|Ga0181578_10165588	All Organisms → Viruses → Predicted Viral	1143	Open in IMG/M
3300020379\|Ga0211652_10083401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	962	Open in IMG/M
3300020387\|Ga0211590_10054281	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
3300020421\|Ga0211653_10451952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300020440\|Ga0211518_10064145	All Organisms → Viruses → Predicted Viral	2047	Open in IMG/M
3300020452\|Ga0211545_10166941	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300020454\|Ga0211548_10253597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300020455\|Ga0211664_10331296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300020470\|Ga0211543_10211317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	958	Open in IMG/M
3300021347\|Ga0213862_10204208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300021425\|Ga0213866_10564502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300021957\|Ga0222717_10020793	Not Available	4412	Open in IMG/M
3300021957\|Ga0222717_10422225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300021958\|Ga0222718_10231140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300021958\|Ga0222718_10305623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300021960\|Ga0222715_10325267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300021960\|Ga0222715_10378711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300021960\|Ga0222715_10607654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300021964\|Ga0222719_10056422	All Organisms → Viruses → Predicted Viral	2975	Open in IMG/M
3300021964\|Ga0222719_10571577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300021964\|Ga0222719_10820041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300022200\|Ga0196901_1050235	All Organisms → Viruses → Predicted Viral	1559	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10444390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300023115\|Ga0255760_10097296	All Organisms → Viruses → Predicted Viral	1782	Open in IMG/M
3300023172\|Ga0255766_10042037	Not Available	3062	Open in IMG/M
3300023173\|Ga0255776_10238139	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
3300023175\|Ga0255777_10606475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300023176\|Ga0255772_10195443	All Organisms → Viruses → Predicted Viral	1154	Open in IMG/M
3300023180\|Ga0255768_10446458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300023180\|Ga0255768_10499037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300023180\|Ga0255768_10525905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300025102\|Ga0208666_1150137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300025138\|Ga0209634_1265284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300025590\|Ga0209195_1132354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300025626\|Ga0209716_1139317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300025653\|Ga0208428_1044058	All Organisms → Viruses → Predicted Viral	1375	Open in IMG/M
3300025680\|Ga0209306_1063076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1160	Open in IMG/M
3300025685\|Ga0209095_1157213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300025771\|Ga0208427_1211798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300025849\|Ga0209603_1111141	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300025894\|Ga0209335_10260448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300025897\|Ga0209425_10269661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300026270\|Ga0207993_1108410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300028194\|Ga0257106_1243000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300028196\|Ga0257114_1199706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.67%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.33%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	23.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.83%
Strait	Environmental → Aquatic → Marine → Strait	15.83%
Coastal	Environmental → Aquatic → Marine → Coastal	14.17%
Oceanic	Environmental → Aquatic → Marine → Oceanic	11.67%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.17%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.17%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.50%
Inlet	Environmental → Aquatic → Marine → Inlet	1.67%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.83%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.83%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	23.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.83%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	15.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.17%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	10.83%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.67%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.83%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.83%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.83%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	23.33%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	15.83%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	10.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	9.17%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	8.33%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.50%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.67%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.00%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.50%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.67%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.67%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.83%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.83%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.83%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.83%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.83%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.83%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.83%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013188	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_Metagenome	Environmental	Open in IMG/M
3300013253	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station4_GOM_Metagenome	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016762	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017987	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaG	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020387	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022931 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025685	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026270	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 (SPAdes)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_101024771	3300000117	Marine	LSKIDLEVSDNLEFEDGDCAVIIKEDGSIGRVIMPRVNKAMID
DelMOWin2010_101491922	3300000117	Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPK
DelMOWin2010_102588271	3300000117	Marine	LSKIDLEVSNNLEFDDGDCAVIIKEDGSIGRVIMPKVNKDIL
JGI24003J15210_100589171	3300001460	Marine	LSKIDLEVSDNLEFNDGDCAVIIQEDGSIGRVIMPRVNKEMI
JGI24003J15210_101799642	3300001460	Marine	LSKIDLEVSDNLEFDDGDCAVIIKQDGSIGRVIMPKVDREILKTEGYRKLLDV
KVRMV2_1017641771	3300002231	Marine Sediment	LAKIDLMIADDLEFEEGDCAVIIKNDGSIGRVVMPTMNKDMLKTEGYRKL
Ga0075462_100668251	3300006027	Aqueous	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGYRKLLDILEVLQPG
Ga0098037_13041191	3300006737	Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDK
Ga0098042_11687332	3300006749	Marine	LSKIDLEVSDNLEFEDGDYAVIIKEDGSIGRVIMPRVNKDM
Ga0070749_106875312	3300006802	Aqueous	LSKIDLEITDNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGYRKLLDIL
Ga0075479_103403081	3300006870	Aqueous	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVNKDILKTEGY
Ga0098045_10014785	3300006922	Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKDILKKEG*
Ga0098046_10751601	3300006990	Marine	LSKIDLEVSDNLEFEDGDCAVIIKEDGSIGRVIMPKVNKDILKTEGYRKLLDVLE
Ga0070753_13538302	3300007346	Aqueous	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGYRKLLDVLEVLQPG
Ga0099851_12183662	3300007538	Aqueous	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRKVLDSEGYRKLLDVLEVLQP
Ga0102954_11249881	3300007778	Water	LSKIDLEVSDNLEFNDGDCAVIIKEDGSIGRVVMPSVNRKMIASEGYRKLLDV
Ga0099850_11795712	3300007960	Aqueous	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVVMPSVNRKMIASEGY
Ga0102960_10664853	3300009000	Pond Water	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGYRKLLDVLEVLQP
Ga0102963_13913232	3300009001	Pond Water	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGY
Ga0115566_101120851	3300009071	Pelagic Marine	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMIASEGYRKLLD
Ga0115553_12330161	3300009445	Pelagic Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSVGRVIMPKVNKDMLKTEGYKKL
Ga0115558_14012112	3300009449	Pelagic Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKDILKTEGYRKLLDVL
Ga0115554_11224703	3300009472	Pelagic Marine	LSKIDLEVSDNLEFDEGDCAVIIKENGSIGRVIMPKVN
Ga0115569_103594852	3300009497	Pelagic Marine	LSKIDLEVSDNLEFDEGDCAVIIKENGSIGRVIMPKVNKDILQT
Ga0098059_10758313	3300010153	Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVNKEILKTEGYRKLLDVLEILQPG
Ga0129345_11027873	3300010297	Freshwater To Marine Saline Gradient	LSKIDLEIADNLDFVDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGY
Ga0129342_12273901	3300010299	Freshwater To Marine Saline Gradient	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDINRKILE
Ga0129324_100434936	3300010368	Freshwater To Marine Saline Gradient	LSKIDLEITDNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVL
Ga0129324_102343002	3300010368	Freshwater To Marine Saline Gradient	LSKIDLEIADNLDFDDGDCAVVIKEDGSIGRVIMPDINKNVLDSEGY
Ga0163111_105687621	3300012954	Surface Seawater	LSKIDLEVSDHLEFDDGDCAVVIKEDGSIGRVIMPKVDKEIIKTEGYRKLLDVLEV
Ga0116834_10224013	3300013188	Marine	LSKVDLEISDSLEFEDGDCAVIIRSDGSIGRVIMPKMDADMLNTEG
Ga0116813_10629941	3300013253	Marine	LSKVDLEISDSLEFEDGDCAVIIRSDGSIGRVIMPKMDADMLNTEGYRKLLDVLDVLQ
Ga0182078_109043151	3300016747	Salt Marsh	LSKIDLEIADELEFEDGDIAVIIKDDGAIGRVIMPKMDKEILDTEGYRKLLDVL
Ga0182084_11521332	3300016762	Salt Marsh	LSKIDLEIADNLDFDDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGYRKL
Ga0182090_13496411	3300016797	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKDILKTEGYRKLLDV
Ga0182090_15058111	3300016797	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKADGSIGRVIMPKVNKDILKTEGYRKLLDVL
Ga0180120_102023601	3300017697	Freshwater To Marine Saline Gradient	LSKIDLEITDNLDFEDGDCAVVIKEDGSIGRVIMPDINRNV
Ga0180120_102467102	3300017697	Freshwater To Marine Saline Gradient	LSKIDLEVSDTLEFEEGDIAVIIKEDGSIGRVIMPKVNKDMLKTEGYKK
Ga0181412_11310972	3300017714	Seawater	LSKIDLEVADSLEFEDGDIAVIIKQDGSIGRVIMPKMDKEILE
Ga0181388_11477161	3300017724	Seawater	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKDILKTEGYRKLLDVLE
Ga0187222_10418113	3300017734	Seawater	LSKIDLEISDSLEFEDGDCAVIIKNDGSIGRVIMPKMDKEMLNTEG
Ga0187222_10908311	3300017734	Seawater	LSKIDLEISDSLEFEDGDCAVIIKEDGTIGRVIMPKINKE
Ga0181433_10974451	3300017739	Seawater	LSKIDLEISDSLEFEDGDCAVIIKNDGSIGRVIMPKMDKEMLNTEGYRKLL
Ga0181421_11218552	3300017741	Seawater	LSKIDLEVSDNLEFNDGDCAVIIKEDGSIGRVIMPRVNKAMIQSEGYKKLLDVLEVL
Ga0181399_10594853	3300017742	Seawater	LSKIDLEVSDSLEFDEGDCAVIIKEDGTIGRVIMPKVNKEILKTEGYKKLLDVLEV
Ga0181389_10479201	3300017746	Seawater	LSKIDLEVSDNLEFDDGDCAVIIQNDGSIGKVVMPNVNRKMIESEGYRKLLDVLEV
Ga0181392_12283691	3300017749	Seawater	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKV
Ga0181411_10685443	3300017755	Seawater	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMIASEGY
Ga0181409_10093616	3300017758	Seawater	LSKIDLEVSDNLEFNDGDCAVIIQEDGSIGRVIMPRVN
Ga0181414_11400461	3300017759	Seawater	LSKIDLEISDNLEFDEGDCAVIIKPNGSIGRVIMPQMNQAILKTEGYKKLLDVLEILQP
Ga0181408_10285574	3300017760	Seawater	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKE
Ga0181408_11269402	3300017760	Seawater	LSKIDLEITNTLEFDDGDCAVIIKEDGSIGRVIMPGIKRGRLETEGYKKLLDVLE
Ga0181410_11404041	3300017763	Seawater	LSKIDLEVSDNLEFNDGDCAVIIQEDGSIGRVIMPRVNKAMV
Ga0181385_11275702	3300017764	Seawater	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKEILKTEGYR
Ga0187217_13027692	3300017770	Seawater	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKEILKTEGYRKLLDVL
Ga0181430_11409762	3300017772	Seawater	LSKIDLEVSDNLEFDDGDCAVIIKEDGSVGRVIMPKVNKDILKT
Ga0181424_100569965	3300017786	Seawater	LSKIDLEITNTLEFDDGDCAVIIKEDGSIGRVIMPDIKRGRLETEGYKKLL
Ga0181584_101486731	3300017949	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKMLESEGYKKL
Ga0181607_101472374	3300017950	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKILESEGYKKLLDVLEVL
Ga0181580_104515083	3300017956	Salt Marsh	MSKIDLEITDNLDFEDGDCAVVIKEDGSIGRVIMPDI
Ga0181582_106173311	3300017958	Salt Marsh	LSKIDLEVSDELNFEEGDIAVTIKDDGSIGRVIMPKMDKEMLNTEGYRKLLDVID
Ga0181585_103516383	3300017969	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRK
Ga0181569_110095042	3300017986	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKADGSIGRVIMPKVNKDILKTEGYRKLLDVLE
Ga0180431_111452172	3300017987	Hypersaline Lake Sediment	LSKVDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRN
Ga0181601_104344002	3300018041	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKDILKTEGYKK
Ga0181560_103611282	3300018413	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKADGSIGRVIMPKVN
Ga0181563_101023895	3300018420	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVNKD
Ga0181563_108028941	3300018420	Salt Marsh	LSKIDLEIADNLEFEDGDCAVIIKQDGSVGRVIMPKMNKEMLKTEGYKKLLD
Ga0181591_108442262	3300018424	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKMLESEGYKKLL
Ga0181574_101730424	3300020056	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVNKDILKTEGYRKLLDVL
Ga0181574_106585951	3300020056	Salt Marsh	LSKVKLEINDDLKFEDGDCAVIIKEDGSIGRIIMPDMNKDYLNTEGYRKLLDVIDVLDPG
Ga0206128_12990101	3300020166	Seawater	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMMASEG
Ga0181596_101141091	3300020177	Salt Marsh	LSKIDLEVSDNLEFDEGDCAVIIKEDGSIGRVIMPKVNKDILKT
Ga0181599_12493001	3300020178	Salt Marsh	LSKIDLEVSDNLEFDEGDCAVIIKEDGSIGRVIMPKVNKDILKTEGYRKLL
Ga0181578_101655883	3300020189	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKILESEGYKKLLDVLEVLEPG
Ga0211652_100834013	3300020379	Marine	LSKIDLEIADNLEFDEGDCAVIIKPDGSIGRVIMPKMNQATLK
Ga0211590_100542811	3300020387	Marine	LSKIDLEITDKLEFNDGDCAVIIKEDGSIGRVIMPKIDKAFLSTEGYRKLLDV
Ga0211653_104519522	3300020421	Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGTIGRVIMPKVDKDLLQTEGYRKLLD
Ga0211518_100641451	3300020440	Marine	LSKIDLEISDNLEFSEGDCAVIIKEDGSIGRVIMPKVDKEILQTEGY
Ga0211545_101669413	3300020452	Marine	LSKIDLEVSDDLEFEDGDCAVIIKQDGSVGKVIMPRMDTKMLNSPGYRSLLD
Ga0211548_102535971	3300020454	Marine	LSKIDLEIADSLEFEEGDCAVIIKSDGSIGRVIMPQMNQATLNTDGYKKLL
Ga0211664_103312961	3300020455	Marine	LSKIDLEISDNLEFEEGDCAVIIKEDGSIGRVIMPKMNQATLKTEGYKK
Ga0211543_102113173	3300020470	Marine	LGKIDLEINDELKFEEGDCAVIIKEDGSIGRVIMPNMSKDYLNTE
Ga0213862_102042082	3300021347	Seawater	LSKIDLEIADNLEFEDGDCAVIIKQDGSVGRVIMPKMNKEM
Ga0213866_105645022	3300021425	Seawater	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRNV
Ga0222717_100207937	3300021957	Estuarine Water	LSKIDLEVSDNLEFNDGDCAVIIKEDGSIGRVIMPKV
Ga0222717_104222251	3300021957	Estuarine Water	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVVMPSVNRKMIASE
Ga0222718_102311401	3300021958	Estuarine Water	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMP
Ga0222718_103056231	3300021958	Estuarine Water	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKDILKTEGYKKLLD
Ga0222715_100524916	3300021960	Estuarine Water	LSKVDLEIADNLEFEDGDIAITIKPDGAIGKVILPKMDLKT
Ga0222715_103252673	3300021960	Estuarine Water	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINR
Ga0222715_103787111	3300021960	Estuarine Water	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVLDS
Ga0222715_106076542	3300021960	Estuarine Water	LSKIDLEVSDNLEFDEGDCAVIIKEDGSIGRVIMPKVNKD
Ga0222719_100564221	3300021964	Estuarine Water	LSKIDLEVSDNLEFDEGDCAVIIKEDGSLGRVIMPKVNKDILKTEGYRKLL
Ga0222719_105715771	3300021964	Estuarine Water	LSKIDLEVSDNLEFDEGDCAVIIKEDGSIGRVIMPK
Ga0222719_108200411	3300021964	Estuarine Water	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMIASEGYKKLLDVLEVLQPG
Ga0196901_10502351	3300022200	Aqueous	LSKIDLEIADNLDFEDGDCAVVIKGDGSIGRVIMPDINRNVLDSEGYRKLLDVLEVLQ
(restricted) Ga0233433_104443902	3300022931	Seawater	LSKIDLEVSDSLEFDDGDCAVIIKEDGSVGRVIMPRVNKDMLKTEGYKKL
Ga0255760_100972961	3300023115	Salt Marsh	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVNKDILKTEGYRKLLDVLEV
Ga0255766_100420371	3300023172	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKMLESEGYKKLLDV
Ga0255776_102381391	3300023173	Salt Marsh	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRN
Ga0255777_106064752	3300023175	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKMLESEGYKK
Ga0255772_101954433	3300023176	Salt Marsh	LSKIDLEVSDNLEFNDGDCAVIIKEDGSIGRVIMPKVDKDILKTEGYKKLLDVLEV
Ga0255768_104464582	3300023180	Salt Marsh	LSKIDLEIADNLDFEDGDCAVVIKEDGSIGRVIMPDINRNVLDSEGYRKLLDV
Ga0255768_104990371	3300023180	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKMLESEG
Ga0255768_105259052	3300023180	Salt Marsh	LSKIDLEITDNLSFEDGDCAVIIKEDGSIGRVIMPDMNRKMLESEGYKKLLDVLEV
Ga0208666_11501371	3300025102	Marine	LSKIDLEISDNLEFNEGDCAVIIKEDGSIGRVIMPKINRKMLDSAGYKNLLDVLEIL
Ga0209634_12652842	3300025138	Marine	LSKIDLEVSDNLEFDDGDCAVIIQNDGSIGKVVMPNVNRK
Ga0209195_11323541	3300025590	Pelagic Marine	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMIA
Ga0209716_11393172	3300025626	Pelagic Marine	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMIASEGYRKLLDVL
Ga0208428_10440581	3300025653	Aqueous	LSKIDLEVSDNLEFDEGDCAVIIKEDGSIGRVIMPKVNKDILK
Ga0209306_10630763	3300025680	Pelagic Marine	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMIASEGYRKLLDVLEV
Ga0209095_11572132	3300025685	Pelagic Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGAIGKVIMPKVNKDILKTEGYRKLLD
Ga0208427_12117981	3300025771	Aqueous	LSKIDLEIADNLDFEDGECAVVIKEDGSIGRVIMPDINRNV
Ga0209603_11111413	3300025849	Pelagic Marine	LSKIDLEVSDNLEFDEGDCAIIIKEDGSIGRVIMPKVDKDILKTEGYRKL
Ga0209335_102604482	3300025894	Pelagic Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVNKEIIKT
Ga0209425_102696611	3300025897	Pelagic Marine	LSKIDLEVSDNLEFDDGDCAVIIKEDGSIGRVIMPKVDKDILKTEG
Ga0207993_11084101	3300026270	Marine	LSKIDLEVADSLEFEDGDIAVIIKQDGSIGRVIMPKMDKEILDT
Ga0257106_12430001	3300028194	Marine	LSKVDLEISDNLQFDDGDCAVIIKDDGSIGRVIMPKVNKDILQTEGYRKLLDVLEIL
Ga0257114_11997062	3300028196	Marine	LSKIDLEVSDNLQFDDGDCAVIIKEDGSIGRVVMPDVNRKMIASEGYRKLLDVLEVLQTGAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters