Metagenome Family F073400

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073400
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	63 residues
Representative Sequence	MRSNQLKRFINSDVVGQLNNGLFFEGHVLDKEGRASVFDRDSQTPRQISAVQVKWLAKAVRYC
Number of Associated Samples	82
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	89.08 %
% of genes near scaffold ends (potentially truncated)	18.33 %
% of genes from short scaffolds (< 2000 bps)	60.00 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (95.833 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.667 % of family members)
Environment Ontology (ENVO)	Unclassified (42.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.99% β-sheet: 34.07% Coil/Unstructured: 54.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01557	FAA_hydrolase	39.17
PF07883	Cupin_2	5.83
PF14528	LAGLIDADG_3	5.00
PF00206	Lyase_1	4.17
PF10415	FumaraseC_C	2.50
PF12695	Abhydrolase_5	1.67
PF01402	RHH_1	0.83
PF00005	ABC_tran	0.83
PF02313	Fumarate_red_D	0.83
PF00692	dUTPase	0.83
PF13439	Glyco_transf_4	0.83
PF13419	HAD_2	0.83
PF01738	DLH	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.83
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.83
COG3080	Fumarate reductase subunit D	Energy production and conversion [C]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.33 %
Viruses	superkingdom	All Organisms → Viruses	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	95.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	2.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.50 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.50 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	2.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.50 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.50 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1001923	All Organisms → cellular organisms → Archaea	3380	Open in IMG/M
3300002558\|JGI25385J37094_10000002	All Organisms → cellular organisms → Archaea	41513	Open in IMG/M
3300002558\|JGI25385J37094_10015487	All Organisms → cellular organisms → Archaea	2731	Open in IMG/M
3300002558\|JGI25385J37094_10021786	All Organisms → cellular organisms → Archaea	2285	Open in IMG/M
3300002558\|JGI25385J37094_10038800	All Organisms → cellular organisms → Archaea	1648	Open in IMG/M
3300002558\|JGI25385J37094_10192088	All Organisms → cellular organisms → Archaea	547	Open in IMG/M
3300002560\|JGI25383J37093_10001219	All Organisms → cellular organisms → Archaea	6993	Open in IMG/M
3300002561\|JGI25384J37096_10202065	All Organisms → cellular organisms → Archaea	584	Open in IMG/M
3300002562\|JGI25382J37095_10002944	All Organisms → cellular organisms → Archaea	5665	Open in IMG/M
3300002562\|JGI25382J37095_10091410	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300002562\|JGI25382J37095_10210487	All Organisms → cellular organisms → Archaea	587	Open in IMG/M
3300002562\|JGI25382J37095_10245837	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300002909\|JGI25388J43891_1013057	All Organisms → cellular organisms → Archaea	1528	Open in IMG/M
3300002912\|JGI25386J43895_10126046	All Organisms → cellular organisms → Archaea	634	Open in IMG/M
3300005166\|Ga0066674_10287853	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	773	Open in IMG/M
3300005167\|Ga0066672_10129096	All Organisms → cellular organisms → Archaea	1569	Open in IMG/M
3300005167\|Ga0066672_10575686	All Organisms → cellular organisms → Archaea	730	Open in IMG/M
3300005167\|Ga0066672_10809777	All Organisms → cellular organisms → Archaea	588	Open in IMG/M
3300005179\|Ga0066684_10051427	All Organisms → cellular organisms → Archaea	2363	Open in IMG/M
3300005180\|Ga0066685_10068895	All Organisms → cellular organisms → Archaea	2313	Open in IMG/M
3300005445\|Ga0070708_101091596	All Organisms → cellular organisms → Archaea	747	Open in IMG/M
3300005445\|Ga0070708_101255349	All Organisms → cellular organisms → Archaea	692	Open in IMG/M
3300005450\|Ga0066682_10033298	All Organisms → cellular organisms → Archaea	3036	Open in IMG/M
3300005451\|Ga0066681_10000870	All Organisms → cellular organisms → Archaea	11123	Open in IMG/M
3300005454\|Ga0066687_10349160	All Organisms → cellular organisms → Archaea	847	Open in IMG/M
3300005468\|Ga0070707_100000047	All Organisms → cellular organisms → Archaea	105077	Open in IMG/M
3300005468\|Ga0070707_100102137	All Organisms → cellular organisms → Archaea	2778	Open in IMG/M
3300005468\|Ga0070707_100449386	All Organisms → cellular organisms → Archaea	1249	Open in IMG/M
3300005468\|Ga0070707_100649604	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1017	Open in IMG/M
3300005536\|Ga0070697_100003743	All Organisms → cellular organisms → Archaea	11674	Open in IMG/M
3300005559\|Ga0066700_10257126	All Organisms → cellular organisms → Archaea	1222	Open in IMG/M
3300005561\|Ga0066699_10081752	All Organisms → cellular organisms → Archaea	2085	Open in IMG/M
3300005574\|Ga0066694_10003030	All Organisms → cellular organisms → Archaea	6613	Open in IMG/M
3300005575\|Ga0066702_10420354	All Organisms → cellular organisms → Archaea	817	Open in IMG/M
3300006755\|Ga0079222_10772777	All Organisms → cellular organisms → Archaea	778	Open in IMG/M
3300006796\|Ga0066665_10665034	All Organisms → cellular organisms → Archaea	827	Open in IMG/M
3300006796\|Ga0066665_11147734	All Organisms → cellular organisms → Archaea	592	Open in IMG/M
3300006804\|Ga0079221_10763787	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300006903\|Ga0075426_10918877	All Organisms → cellular organisms → Archaea	660	Open in IMG/M
3300007255\|Ga0099791_10060968	All Organisms → cellular organisms → Archaea	1698	Open in IMG/M
3300007255\|Ga0099791_10182521	All Organisms → cellular organisms → Archaea	986	Open in IMG/M
3300007258\|Ga0099793_10108273	All Organisms → cellular organisms → Archaea	1291	Open in IMG/M
3300007258\|Ga0099793_10189070	All Organisms → cellular organisms → Archaea	985	Open in IMG/M
3300007265\|Ga0099794_10009295	All Organisms → cellular organisms → Archaea	4126	Open in IMG/M
3300007265\|Ga0099794_10116969	All Organisms → cellular organisms → Archaea	1339	Open in IMG/M
3300009012\|Ga0066710_102562501	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300009038\|Ga0099829_10003200	All Organisms → cellular organisms → Archaea	9570	Open in IMG/M
3300009038\|Ga0099829_10049781	All Organisms → cellular organisms → Archaea	3099	Open in IMG/M
3300009038\|Ga0099829_10078301	All Organisms → cellular organisms → Archaea	2523	Open in IMG/M
3300009038\|Ga0099829_10224685	All Organisms → cellular organisms → Archaea	1526	Open in IMG/M
3300009089\|Ga0099828_10359703	All Organisms → cellular organisms → Archaea	1312	Open in IMG/M
3300009089\|Ga0099828_11352975	All Organisms → cellular organisms → Archaea	629	Open in IMG/M
3300009090\|Ga0099827_10163182	All Organisms → cellular organisms → Archaea	1831	Open in IMG/M
3300009137\|Ga0066709_104453427	All Organisms → cellular organisms → Archaea	512	Open in IMG/M
3300010336\|Ga0134071_10512707	All Organisms → cellular organisms → Archaea	620	Open in IMG/M
3300011269\|Ga0137392_10103123	All Organisms → cellular organisms → Archaea	2251	Open in IMG/M
3300011270\|Ga0137391_10243482	All Organisms → cellular organisms → Archaea	1560	Open in IMG/M
3300011271\|Ga0137393_10795461	All Organisms → cellular organisms → Archaea	808	Open in IMG/M
3300012189\|Ga0137388_10813592	All Organisms → cellular organisms → Archaea	866	Open in IMG/M
3300012202\|Ga0137363_10060537	All Organisms → cellular organisms → Archaea	2749	Open in IMG/M
3300012202\|Ga0137363_10101729	All Organisms → cellular organisms → Archaea	2185	Open in IMG/M
3300012202\|Ga0137363_10930036	All Organisms → cellular organisms → Archaea	738	Open in IMG/M
3300012203\|Ga0137399_10381724	All Organisms → cellular organisms → Archaea	1173	Open in IMG/M
3300012349\|Ga0137387_10006088	All Organisms → cellular organisms → Archaea	6744	Open in IMG/M
3300012349\|Ga0137387_10526624	All Organisms → cellular organisms → Archaea	858	Open in IMG/M
3300012361\|Ga0137360_10059324	All Organisms → cellular organisms → Archaea	2791	Open in IMG/M
3300012361\|Ga0137360_10085337	All Organisms → cellular organisms → Archaea	2379	Open in IMG/M
3300012361\|Ga0137360_11224889	All Organisms → cellular organisms → Archaea	649	Open in IMG/M
3300012362\|Ga0137361_10013085	All Organisms → cellular organisms → Bacteria	6018	Open in IMG/M
3300012918\|Ga0137396_10118622	All Organisms → cellular organisms → Archaea	1905	Open in IMG/M
3300012918\|Ga0137396_10537196	All Organisms → cellular organisms → Archaea	866	Open in IMG/M
3300012925\|Ga0137419_11370449	All Organisms → cellular organisms → Archaea	596	Open in IMG/M
3300012927\|Ga0137416_11408038	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300012927\|Ga0137416_12064407	All Organisms → cellular organisms → Archaea	523	Open in IMG/M
3300012930\|Ga0137407_12023804	All Organisms → cellular organisms → Archaea	550	Open in IMG/M
3300012975\|Ga0134110_10018340	All Organisms → cellular organisms → Archaea	2695	Open in IMG/M
3300015245\|Ga0137409_10084550	All Organisms → cellular organisms → Archaea	2959	Open in IMG/M
3300018431\|Ga0066655_10183088	All Organisms → cellular organisms → Archaea	1278	Open in IMG/M
3300018433\|Ga0066667_10007265	All Organisms → cellular organisms → Archaea	5032	Open in IMG/M
3300018468\|Ga0066662_10000572	All Organisms → cellular organisms → Archaea	16224	Open in IMG/M
3300021088\|Ga0210404_10180950	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1121	Open in IMG/M
3300025922\|Ga0207646_10000028	All Organisms → cellular organisms → Archaea	227768	Open in IMG/M
3300025922\|Ga0207646_10033674	All Organisms → cellular organisms → Archaea	4632	Open in IMG/M
3300025922\|Ga0207646_10736475	All Organisms → cellular organisms → Archaea	880	Open in IMG/M
3300026277\|Ga0209350_1021758	All Organisms → cellular organisms → Archaea	1974	Open in IMG/M
3300026295\|Ga0209234_1005385	All Organisms → cellular organisms → Bacteria	4850	Open in IMG/M
3300026296\|Ga0209235_1000013	All Organisms → cellular organisms → Archaea	60883	Open in IMG/M
3300026296\|Ga0209235_1003859	All Organisms → cellular organisms → Archaea	8365	Open in IMG/M
3300026297\|Ga0209237_1003442	All Organisms → cellular organisms → Archaea	9618	Open in IMG/M
3300026297\|Ga0209237_1033204	All Organisms → cellular organisms → Archaea	2791	Open in IMG/M
3300026298\|Ga0209236_1231504	All Organisms → cellular organisms → Archaea	628	Open in IMG/M
3300026301\|Ga0209238_1006037	All Organisms → cellular organisms → Bacteria	4848	Open in IMG/M
3300026306\|Ga0209468_1018054	All Organisms → cellular organisms → Archaea	2545	Open in IMG/M
3300026308\|Ga0209265_1058119	All Organisms → cellular organisms → Archaea	1176	Open in IMG/M
3300026309\|Ga0209055_1001794	All Organisms → cellular organisms → Archaea	13898	Open in IMG/M
3300026315\|Ga0209686_1000949	All Organisms → cellular organisms → Archaea	14497	Open in IMG/M
3300026326\|Ga0209801_1010342	All Organisms → cellular organisms → Archaea	4847	Open in IMG/M
3300026334\|Ga0209377_1026355	All Organisms → cellular organisms → Archaea	2855	Open in IMG/M
3300026361\|Ga0257176_1090178	All Organisms → cellular organisms → Archaea	504	Open in IMG/M
3300027643\|Ga0209076_1039829	All Organisms → cellular organisms → Archaea	1322	Open in IMG/M
3300027643\|Ga0209076_1041080	All Organisms → cellular organisms → Archaea	1303	Open in IMG/M
3300027655\|Ga0209388_1042781	All Organisms → cellular organisms → Archaea	1306	Open in IMG/M
3300027671\|Ga0209588_1000205	All Organisms → cellular organisms → Archaea	15929	Open in IMG/M
3300027671\|Ga0209588_1032259	All Organisms → cellular organisms → Archaea	1678	Open in IMG/M
3300027748\|Ga0209689_1146040	All Organisms → cellular organisms → Archaea	1147	Open in IMG/M
3300027862\|Ga0209701_10035251	All Organisms → cellular organisms → Archaea	3241	Open in IMG/M
3300027875\|Ga0209283_10073127	All Organisms → cellular organisms → Archaea	2211	Open in IMG/M
3300027882\|Ga0209590_10796587	All Organisms → cellular organisms → Archaea	600	Open in IMG/M
3300028536\|Ga0137415_10387036	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1202	Open in IMG/M
3300028536\|Ga0137415_11208720	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300028673\|Ga0257175_1046427	All Organisms → cellular organisms → Archaea	788	Open in IMG/M
3300028792\|Ga0307504_10304744	All Organisms → cellular organisms → Archaea	601	Open in IMG/M
3300031720\|Ga0307469_10411373	All Organisms → cellular organisms → Archaea	1158	Open in IMG/M
3300031720\|Ga0307469_10875442	All Organisms → cellular organisms → Archaea	830	Open in IMG/M
3300031820\|Ga0307473_10815056	All Organisms → cellular organisms → Archaea	667	Open in IMG/M
3300032180\|Ga0307471_100196658	All Organisms → cellular organisms → Archaea	2011	Open in IMG/M
3300032180\|Ga0307471_100497421	All Organisms → cellular organisms → Archaea	1366	Open in IMG/M
3300032180\|Ga0307471_100604806	All Organisms → cellular organisms → Archaea	1255	Open in IMG/M
3300032205\|Ga0307472_100291571	All Organisms → cellular organisms → Archaea	1306	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.17%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	22.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10019231	3300002557	Grasslands Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVSVFDRDSRAHQISATQVKWLAKAVRYC*
JGI25385J37094_1000000242	3300002558	Grasslands Soil	MRRDQLRRFLNSEVVGQLSNGLFFEGYVVDQAGRALVFDRDGRAPHQISATRVKWLAKAVRYC*
JGI25385J37094_100154872	3300002558	Grasslands Soil	MRSNQLKRFLNSDVVGQLNNGLFFEGHVLNKAGKPSVLERDSQATRQISATRVKWLAKAVRYC*
JGI25385J37094_100217864	3300002558	Grasslands Soil	MRXDQLRRFLNSDVVGQLNNGLFFEGXVADEAGRVSVFDRDSRAHQISATXVKWLAKAVRYC*
JGI25385J37094_100388001	3300002558	Grasslands Soil	MRMDQLRRFLNTNVVGQLNNGLFFEGYVSDKAGRASVFDRDSRTPHQISPTQVKWLAKAVRYC*
JGI25385J37094_101920882	3300002558	Grasslands Soil	MKTSQLKRFINSDVVGQLNNGLFFEGHVVDRAGRPSVIDLDGRGTRQISAPRVKWLI
JGI25383J37093_100012191	3300002560	Grasslands Soil	MRSNQLKRFLNSDVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPHQIRATQVKWLAKAARYC*
JGI25384J37096_102020652	3300002561	Grasslands Soil	MRTSQLKRFINSDVVGQLNNGLFFEGHVVDRAGRPSVIDMDDRGTRQISAPRVKWLTRAVRY
JGI25382J37095_100029447	3300002562	Grasslands Soil	MRSNQLKRFLNSXVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPHQIRATQVKWLAKAARYC*
JGI25382J37095_100914101	3300002562	Grasslands Soil	MRSDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVSVFDRDSRAHQISATQVKWLAKAVRYC*
JGI25382J37095_102104872	3300002562	Grasslands Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGYVADKAGRAWVFDRDSQAPQPISATQVKWLAKAARYC*
JGI25382J37095_102458371	3300002562	Grasslands Soil	MKTSQLKRFINSDVVGQLNNGLFFEGHVVDRAGRPSVIDLDGRGTRQISAPRVKWLIRAVRYC*
JGI25388J43891_10130572	3300002909	Grasslands Soil	MRSDQLRRFLNTDVVGQLNNGLFFEGHVVDIAGRALVFDRDGQAPHQISATRVKWLAKAVRYC*
JGI25386J43895_101260461	3300002912	Grasslands Soil	MRMDQLRRFLNTNVVGQLNNGLFFEGYVSDKAGRASVFDRDSRTPHQISPTQVKWLAKA
Ga0066674_102878533	3300005166	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVLVFDRDSRAHQISATQVKWRAKAVRYC*
Ga0066672_101290963	3300005167	Soil	MRRDQLKRFLNNEVVGQLNDGLFFEGYVADKGGRVSVFDRDSRAHQISATQVKWLAKAVRYC*
Ga0066672_105756862	3300005167	Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGYVLNKAGKPSVLERDSQVTRQISATRVKWLVKAVRYC*
Ga0066672_108097771	3300005167	Soil	MRSNQLKRFLNSDVVGQLNNGLFFEGHVLNKAGKPSVLERDSQATRQISATRVKWLVKAVRYC*
Ga0066684_100514271	3300005179	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVAGEAGRVLVFDRDSRAHQISATQVKWLAKAVRYC*
Ga0066685_100688953	3300005180	Soil	MRSRELRRFLNSEVVGQLNNGLFFEGHVEDNAGKASIFDRDGRPPRRISPTRVKWLTKAVRYC*
Ga0070708_1010915962	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RGESCMRTNQLKRFINSDVVGQLNNGLFFEGYVVDKEGRASVLDQDSQTPRKISATRVKWLAKAVRYC*
Ga0070708_1012553492	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRTNQLRRFINSDVVGQLNNGLFFEGYVVDKEGRASVFDQDSQTPRKISATRVKWLAKAVRYC*
Ga0066682_100332981	3300005450	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVLVFDRDSRAHQISATQVKWLAKAVR
Ga0066681_100008708	3300005451	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVLVFDRDSRAHQISATQVKWLAKAVRYC*
Ga0066687_103491601	3300005454	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADKAGRVSVFDRDSRAHQISATQVKWLAKAVRYC*
Ga0070707_10000004783	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRSDQLKRFLNSDVVGQLTNGLFFEGHVQDRSGKARVFDQQGEVPRRISAIRVRWLAKAVRHC*
Ga0070707_1001021373	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRASVFDGDDQTPRQISAAQVKWLAKAVRYC*
Ga0070707_1004493861	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRTNQLKRFINSDVVGQLNNGLFFEGYVVDKEGRASVFDQDSQTPRKISATRVKWLAKA
Ga0070707_1006496041	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRSNQLKRFINSDVVGQLNNGLFFEGCVVDKEGRASVFDQDSQTPRKISATRVKWLAKAVRYC*
Ga0070697_1000037439	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSQLKRFINIDVVGQLDNGLFFEGHVIDMAGRPSVIDLDGRGTQQISAPRVKWLTRAMRYC*
Ga0066700_102571261	3300005559	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPHQIRATQVKWLAKAARYC*
Ga0066699_100817523	3300005561	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVLVFDRDSRAHQISATRVKWLAKAVRYC*
Ga0066694_100030307	3300005574	Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGHVVDESGRPSVSDWDGRARHQISASRVKWLVKAVRYC*
Ga0066702_104203543	3300005575	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVLVFDRDSRAHQISATQVKWLAK
Ga0079222_107727771	3300006755	Agricultural Soil	MRTNQLKRFINSDVVGQLNNGLFFEGYVVDKEGRASVFDRGSQTLCQISATRVKWLAKAVRYC*
Ga0066665_106650341	3300006796	Soil	MRSNQLKRFLNSDVVGQWNNGLFFEGYVADKAGRESDFDRDSQTPHQIRATQVKWLAKAARYC*
Ga0066665_111477342	3300006796	Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGHVADKAGRPSVFDWDGRARHQISASRVKWLVK
Ga0079221_107637872	3300006804	Agricultural Soil	MRSDKLKRFLNSDVVGQLTNGLFFEGHVEVRSGRARVFDRDGQVPRRISATRVRWLAKAARYC*
Ga0075426_109188771	3300006903	Populus Rhizosphere	MRTNQLKRFLNSDVVGQLNNGLFFEGHVEDRSGRASVFDREGQLPQRISATRVRWLAKAVRHC*
Ga0099791_100609683	3300007255	Vadose Zone Soil	MRTSQLKRFINSDVVGQLNNGLFFEGHVVDRAGRPSVIDLDGRGTRQISAPRVKWLTRAVRYC*
Ga0099791_101825211	3300007255	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYILDRGGRPSVFDRDDQTPRQIRAAQVKWLAKAVRYC*
Ga0099793_101082733	3300007258	Vadose Zone Soil	MRSNQLKRFINVEVVGQLNNGHFFEGYVLDRAGRASVFDSDNQTPRQISAAQVKWLAKAVRYC*
Ga0099793_101890703	3300007258	Vadose Zone Soil	MRSNQLKRFINSDVVGQLNNGLFFEGHVLDKEGRASVFDRDSQTPRQISAVQVKWLAKAVRYC*
Ga0099794_100092954	3300007265	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGSASIFEGDDQTPRQISAAQVKWLAKAVRYC*
Ga0099794_101169691	3300007265	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRASVFDGDDQTPRQISAAQVKWLAKAVRY
Ga0066710_1025625011	3300009012	Grasslands Soil	MRSNQLKRFLNSDVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPDQIRATQVKWLAKAARYC
Ga0099829_1000320011	3300009038	Vadose Zone Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGHVLNKAGKPSVLERDSQVTRQISAARVKWLVKAVRYC*
Ga0099829_100497812	3300009038	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRTSVFDGDNQTPRQISAAQVKWLAKAVRYC*
Ga0099829_100783013	3300009038	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLNKAGRASVFDGDDQTPREVSAAQVKWLAKAVRCC*
Ga0099829_102246853	3300009038	Vadose Zone Soil	MRRDQLRRFLNSDVVGQLNNGLLFEGYVADKAGRASVFDRDDQAPHQISATQIKWLAKAARYC*
Ga0099828_103597031	3300009089	Vadose Zone Soil	PRPLCSGNKDTAPRGESCMRSNQLKRFINSTVVGQLNDGHFFEGYVLNKAGRASVFDGDDQTPREVSAAQVKWLAKAVRCC*
Ga0099828_113529751	3300009089	Vadose Zone Soil	MRSNQLKRFINSEVVGQLNNGHFFEGYVLDNEEGASVFDRDGETPCQISATRVKWLTKAVRYC*
Ga0099827_101631824	3300009090	Vadose Zone Soil	MRSNQLKRFINSDVVGQLNNGHFFEGYVLDKAGRASVFDGDNQEPRQISATRVKWLTKAVRYC*
Ga0066709_1044534271	3300009137	Grasslands Soil	KELRGELWVRSDQLGRTLNTDAVGQLSNVPFSEGHVIHIAGRTLVFDRDGQAPHQISGTRVKWLAKAVRYC*
Ga0134071_105127071	3300010336	Grasslands Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPHQIRATQVKWLAKAARYC*
Ga0137392_101031234	3300011269	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGHVLDKAGRTSVFDGDNQTPRQISAAQVKWLAKAVRYC*
Ga0137391_102434822	3300011270	Vadose Zone Soil	MRSNQLKRFINSEVVGQLNNGHFFEGYVLDHEGRASVFDRDGETPYQVSAARVKWLTKAVRYC*
Ga0137393_107954613	3300011271	Vadose Zone Soil	MRSNQLKRFINCDVVGQLSNGLLFEGYVLDKAGRASVFDRDSQTPCQISATRVKWLAKAVRYC*
Ga0137388_108135922	3300012189	Vadose Zone Soil	MRSNQLKRFINSEVVGQLNNGHFFEGYVLDNEEGASVFDRDGETPYQVSAARVKWLTKAVRYC*
Ga0137363_100605371	3300012202	Vadose Zone Soil	MLGNKNTAPRGESCLRSDQLRRFINSDVVGQLNNGFFFEGHVVDKSGRPSVIDRDSRGTHQISAPRVKWLTKAVRYC*
Ga0137363_101017294	3300012202	Vadose Zone Soil	MRSNQLKRFINSDVVGQLNNGHFFEGYVLDKAGRASVFDGDNQDPRQISAAQVKWLAKAVRCC*
Ga0137363_109300361	3300012202	Vadose Zone Soil	MRTSQLKRFINSDVVGQLNKGLFFEGHVVDRKGRPSVIDLDGGGTRQISAQRVKWLTRAVRYC*
Ga0137399_103817241	3300012203	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRTSVFDGDDQTPRQISAAQVKWLAKAVRYC*
Ga0137387_100060887	3300012349	Vadose Zone Soil	MRSDQLRRFLNSDVVGQLSNGLFFEGYVVDQAGRALVFDRDGQAPYQISATRVKWLAKAVRYC*
Ga0137387_105266243	3300012349	Vadose Zone Soil	MRTSQLKRFINSDVVGQLNNGLFFEGHVVDREGRPSVIDLDGRGTRQISAPRVKWLTRAVRYC*
Ga0137360_100593244	3300012361	Vadose Zone Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGHVADKAGRPSVFDWDGRARHQISASRVKWLVKAVRYC*
Ga0137360_100853374	3300012361	Vadose Zone Soil	MRSNQLKRFINSDVVGQLNNGHFFEGYVLDKAGRASVFDGDNQDPRQISAAQVK
Ga0137360_112248891	3300012361	Vadose Zone Soil	MRSNQVKRFINSEVVGQLNNGHFFEGYVLDKAGRASVFDGDNQDPRQISAAQVK
Ga0137361_100130856	3300012362	Vadose Zone Soil	MRSYQLKRFINSEVVGQLNNGHFFEGYVLDKAGRASVFDGDNQDPRQISAAQVKWLAKAVRCC*
Ga0137396_101186223	3300012918	Vadose Zone Soil	MRSNQLKRFINSEVVGQLNNGHFFEGYVLDKAGRTSVFDGDNQTPRQISAAQVKWLAKAVRYC*
Ga0137396_105371962	3300012918	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRASVFDGDDQTPRQISAAQVKWLAKAARYC*
Ga0137419_113704491	3300012925	Vadose Zone Soil	RSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGSASVFDGDNQTPRQISAAQVKWLAKAVRYC*
Ga0137416_114080381	3300012927	Vadose Zone Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGHVADKAGRPSVFDWDGRARHQISESRVKWLVKAVRYC*
Ga0137416_120644071	3300012927	Vadose Zone Soil	MRSDQLKRFLNSDVVGQLNNGLFFEGHVSERAGRPSVFDRDDQVPRQISAARVKWLARAVRYC*
Ga0137407_120238041	3300012930	Vadose Zone Soil	MRSNQLKRFINSDVVGQLNNGLFFEGYVLDREGRVSVFDRDSQTSCQISATRVKWLAKAERYC*
Ga0134110_100183402	3300012975	Grasslands Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGHVADEAGRVSVFDRDSRAHQISATQVKWLAKAVRYC*
Ga0137409_100845501	3300015245	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRASVFDRDSQPPRQISGAQVKWLAKAVRYC*
Ga0066655_101830882	3300018431	Grasslands Soil	MRSDQLRRFLNTDVVGQLNNGLFFEGHVVDIAGRALVFDRDGQAPHQISATRVKWLAKAVRYC
Ga0066667_100072655	3300018433	Grasslands Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGHVVDESGRPSVSDWDGRARHQISASRVKWLVKAVRYC
Ga0066662_1000057213	3300018468	Grasslands Soil	MRSNQLKRFLNSDVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPHQIRATQVKWLAKAARYC
Ga0210404_101809503	3300021088	Soil	MRIDQLKRFINSDVVGQLNNGLFFEGYVLDRAGRASVFDRDSQTPCQISATRVKWLTKAVRYC
Ga0207646_1000002827	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRSDQLKRFLNSDVVGQLTNGLFFEGHVQDRSGKARVFDQQGEVPRRISAIRVRWLAKAVRHC
Ga0207646_100336746	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRASVFDGDDQTPRQISAAQVKWLAKAVRYC
Ga0207646_107364751	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRTNQLKRFINSDVVGQLNNGLFFEGYVVDKEGRASVFDQDSQTPRKISATRVKWLAKAVRYC
Ga0209350_10217581	3300026277	Grasslands Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGHVADEAGRVSVFDRDSRAHQISATQVKWL
Ga0209234_10053854	3300026295	Grasslands Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVSVFDRDSRAHQISATQVKWLAKAVRYC
Ga0209235_100001316	3300026296	Grasslands Soil	MRRDQLRRFLNSEVVGQLSNGLFFEGYVVDQAGRALVFDRDGRAPHQISATRVKWLAKAVRYC
Ga0209235_10038598	3300026296	Grasslands Soil	MRMDQLRRFLNTNVVGQLNNGLFFEGYVSDKAGRASVFDRDSRTPHQISPTQVKWLAKAVRYC
Ga0209237_10034423	3300026297	Grasslands Soil	MRSNQLKRFLNSDVVGQLNNGLFFEGHVLNKAGKPSVLERDSQATRQISATRVKWLAKAVRYC
Ga0209237_10332041	3300026297	Grasslands Soil	MRSNQLKRFLNSEVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPHQIRATQVKWLAKAARYC
Ga0209236_12315042	3300026298	Grasslands Soil	MKTSQLKRFINSDVVGQLNNGLFFEGHVVDRAGRPSVIDLDGRGTRQISAPRVKWLIRAVRYC
Ga0209238_10060374	3300026301	Grasslands Soil	MRSDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVSVFDRDSRAHQISATQVKWLAKAVRYC
Ga0209468_10180544	3300026306	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVLVFDRDSRAHQISATQVKWLAKAVRYC
Ga0209265_10581191	3300026308	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVAGEAGRVLVFDRDSRAHQISATQVKWLAKAVRYC
Ga0209055_10017944	3300026309	Soil	MRRDQLKRFLNNEVVGQLNDGLFFEGYVADKGGRVSVFDRDSRAHQISATQVKWLAKAVRYC
Ga0209686_100094910	3300026315	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADKAGRVSVFDRDSRAHQISATQVKWLAKAVRYC
Ga0209801_10103425	3300026326	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGHVADEAGRVSVFDRDSRAHQISATQVKWLAKAVRYC
Ga0209377_10263554	3300026334	Soil	MRSNQLRRFLNSDVVGQLNNGLFFEGHVADKAGRPSVFDWDGRARHQISVSRVKWLVKAVRYC
Ga0209057_10516804	3300026342	Soil	MRRDQLRRFLNSDVVGQLNNGLFFEGYVADEAGRVLVFDRDSRAHQISA
Ga0257176_10901781	3300026361	Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRTSVFDGDNQTPRQISAAQVKWLAKAVRYC
Ga0209076_10398291	3300027643	Vadose Zone Soil	MRSNQLKRFINSDVVGQLNNGLFFEGHVLDKEGRASVFDRDSQTPRQISAVQVKWLAKAVRYC
Ga0209076_10410802	3300027643	Vadose Zone Soil	MRSNQLKRFINVEVVGQLNNGHFFEGYVLDRAGRASVFDSDNQTPRQISAAQVKWLAKAVRYC
Ga0209388_10427811	3300027655	Vadose Zone Soil	MRTSQLKRFINSDVVGQLNNGLFFEGHVVDRAGRPSVIDLDGRGTRQISAPRVKWLTRAVRYC
Ga0209588_100020518	3300027671	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGSASIFEGDDQTPRQISAAQVKWLAKAVRYC
Ga0209588_10322592	3300027671	Vadose Zone Soil	MRSNQLKRFINSEVVGQLNNGHFFEGYVLDNEGRASVFDRDGQAPHQIRATQVKWLAKAARYC
Ga0209689_11460402	3300027748	Soil	KRFLNSDVVGQLNNGLFFEGYVADKAGRASVFDRDSQTPHQIRATQVKWLAKAARYC
Ga0209701_100352513	3300027862	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGHVLDKAGRTSVFDGDNQTPRQISAAQVKWLAKAVRYC
Ga0209283_100731273	3300027875	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLNKAGRASVFDGDDQTPREVSAAQVKWLAKAVRCC
Ga0209590_107965872	3300027882	Vadose Zone Soil	MRSNQLKRFINSDVVGQLNNGLFFEGYVLDREGRVSVFDRDSQTSCQISATRVKWL
Ga0137415_103870363	3300028536	Vadose Zone Soil	MRSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRASVFDGDDQTPRQISAAQVKWLAKAARYC
Ga0137415_112087201	3300028536	Vadose Zone Soil	SLSPGNKNTSLRGELLMRSDQLKRFLNSDVVGQLNNGLFFEGHVSERAGRPSVFDRDDQVPRQISAARVKWLARAVRYC
Ga0257175_10464271	3300028673	Soil	RSNQLKRFINSTVVGQLNDGHFFEGYVLDKAGRTSVFDGDNQTPRQISAAQVKWLAKAVRYC
Ga0307504_103047441	3300028792	Soil	MRSNQLKRFINAEVVGQLNNGHFFEGYVLGNEGRASVFDRDGETHCQISATRVKWLAKAVRYC
Ga0307469_104113732	3300031720	Hardwood Forest Soil	QLKRFINNDVVGQLNNGLFFEGHVVDRAGRPSVIDLDDQDTHQISAPRVKWLTRAVKYC
Ga0307469_108754421	3300031720	Hardwood Forest Soil	MRSDQLKRFLNSEVVGQLNNGLFFEGHVEDRSGRASVFDREGQVPRRISATRVRWLAKAVRYC
Ga0307473_108150561	3300031820	Hardwood Forest Soil	MRSDQLKRFLNSDVVGQLKNGLFFEGRVEDRSGRAIVFDREGQVPRRISATRVRWLAKAVRHC
Ga0307471_1001966583	3300032180	Hardwood Forest Soil	MRTSQLKRFINNDVVGQLNNGLFFEGHVVDRSGRPSVIDLDSRGTHQISAPRVKWLTRAVRYC
Ga0307471_1004974211	3300032180	Hardwood Forest Soil	MRSNQLKRFINSDVVGQLNNGLFFEGQIVDKEGKTLVLDRDNQAHHEISPSQVRWLAKAERYC
Ga0307471_1006048062	3300032180	Hardwood Forest Soil	MRSDQLKRFLNSDVVGQLNNGLFFEGHVEDRSGRASVFDREDQVPRRISATRVRWLAKAVRYC
Ga0307472_1002915711	3300032205	Hardwood Forest Soil	MRSDQLKRFLNSDVVGQLNNGLFFEGRVEDKSGRASVFDRDGQVPRRISATRVRWLAKAVRYC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073400

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences