Metagenome / Metatranscriptome Family F073387

Basic Information
Family ID	F073387
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	69 residues
Representative Sequence	MAEPSFAEQMATLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGSKGFQ
Number of Associated Samples	105
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	5.00 %
% of genes from short scaffolds (< 2000 bps)	3.33 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Unclassified (95.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.833 % of family members)
Environment Ontology (ENVO)	Unclassified (27.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.167 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF09980	DUF2214	15.83
PF07045	DUF1330	12.50
PF01925	TauE	3.33
PF13508	Acetyltransf_7	2.50
PF07386	DUF1499	1.67
PF00072	Response_reg	0.83
PF00583	Acetyltransf_1	0.83
PF13577	SnoaL_4	0.83
PF00127	Copper-bind	0.83
PF09118	GO-like_E_set	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	12.50
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	3.33
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	1.67

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
All Organisms	root	All Organisms	5.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
cellular organisms	root	All Organisms → cellular organisms	5.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.00 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	3.33 %

Scaffold	Taxonomy	Length	IMG/M Link
3300009078\|Ga0105106_10148750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1720	Open in IMG/M
3300012529\|Ga0136630_1103027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1049	Open in IMG/M
3300012678\|Ga0136615_10059583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1905	Open in IMG/M
3300028784\|Ga0307282_10030888	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300028824\|Ga0307310_10027192	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300031911\|Ga0307412_10290855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1287	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.67%
Host-Associated	Host-Associated	18.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.83%
Aquatic	Environmental → Aquatic	20.83%
Plants	Host-Associated → Plants	18.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.33%
Freshwater	Environmental → Aquatic → Freshwater	10.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.83%
Sediment	Environmental → Aquatic → Sediment	9.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.50%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.50%
Marine	Environmental → Aquatic → Marine	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.67%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.17%
Ice	Environmental → Aquatic → Freshwater → Ice	3.33%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.50%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.00%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.50%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_100766651	3300000891	Soil	MAEPSFGDQMATLNSTLRAIEVRMALGPAPVEGLEDFKSALDDMRLRLWGLLSAAGGSEARGFQEQF
Ga0055471_101766171	3300003987	Natural And Restored Wetlands	MAEPSFTQQMATLNSTLSAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGSDARSFQEQFRIRR
Ga0062593_1018617231	3300004114	Soil	MAEPSFGEQISTLNSTLRAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLGATVGEKGFQERFRIRRATEMCR
Ga0063356_1061076951	3300004463	Arabidopsis Thaliana Rhizosphere	MPEPSFVDLIATLNSTLQRIEGRLARSQEPVEGLEDFKSALDDMRLRLWGLL
Ga0062592_1003498863	3300004480	Soil	MAEPSLVEQVAILNAALSAIEERLARGHAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEMSRGLGGDLR
Ga0062591_1003423173	3300004643	Soil	MAEPSLVEQVAILNAALSAIEERLARGHAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEMSRGLGGDLRTGAIS
Ga0062378_100439293	3300004780	Wetland Sediment	MAEPTLLEQVAILNATLKAIETRLARGQVPVEGLEDFKSALDDMRLRLWGLL
Ga0065704_105061732	3300005289	Switchgrass Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAAGGEDYKNFQERFRIRRATEMCRGLGN
Ga0070660_1018769902	3300005339	Corn Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERFRIRRATEMCRGL
Ga0070692_101644574	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERFRIRRATEMCRGLGNDLRAGSVSGR
Ga0070692_109316402	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPEPSFADQIATLNSTLRAIEVRMALGRAPVEDLEDFKGALDDMRLRLWGLLGAAGGEDARGFQERFRIRRAIEMCRSLAADLRSG
Ga0070688_1014591931	3300005365	Switchgrass Rhizosphere	MAEPSFGDQISTLNSTLRAIEVRLALGRSPVEGLEDFKSSLDDMRIRLWGLLGATGGDQGFQERFRIRR
Ga0070705_1007483523	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPSFGEQISTLNSTLRAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLGATVGEKGFQERFRIRRATEMCRGLGGDLRS
Ga0070696_1015475402	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAAGGEDYKNFQER
Ga0070693_1004313661	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERF
Ga0066699_110613751	3300005561	Soil	MAEPNFADLIATLNSTLQDVELRLARDHEPVEGLEDFKSALDDMRLRLWGLLSAAGGED
Ga0068852_1027418031	3300005616	Corn Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGEDYKNFQERFRIRRATEMCRGL
Ga0068861_1022259402	3300005719	Switchgrass Rhizosphere	MPDPSFVDLIATLNSTLQRIEGRLAPGQEPVEGLEDFKSALDDMRLRLWGLLSATGGSDFKGIQERFRIRRATEMCRGLSGDLGTGALSWRH
Ga0075287_10435761	3300005873	Rice Paddy Soil	MPEPRLVDQVATLNSTLSSVERRLTRGNPPVEGLEDFKSALDDMR
Ga0075287_10581661	3300005873	Rice Paddy Soil	MPEPSLADQMASLNSTLRVIEVRLALSRPPVEGLEEFRIILDDMRLRLWGLLGAIGGDYQDLQERFRIRRAIELCRGLSGDLKA
Ga0075291_10259461	3300005884	Rice Paddy Soil	MPEPSLADQMASLNSTLRVIEVRLALSRPPVEGLEEFRIILDDMRLRLWGLLGAIGGDYQDLQERFRIRRAIELCRGLSGDLKAGLVSGRQ
Ga0075291_10337193	3300005884	Rice Paddy Soil	MGEPSFGEHVASLNSTLRAIEVRLALSRVPVEDLEDFKSALDDMRLRLWGLLGAAGTENYSGFQERFRIRRATE
Ga0081455_103957623	3300005937	Tabebuia Heterophylla Rhizosphere	MGEPSYAEQVATLNSTLQAIELRAAQGKPPGQGLEDFKSALDDIRLRLWGLLLAAGG
Ga0079222_119104541	3300006755	Agricultural Soil	MAEPSFGDQVSTLNSTLRAIEVRLALGRSPVEDLEDFKSSLDDMRLRLWGLLGATGGDQGFQERFRIRRATEMCRGLGTDLRSGSVSG
Ga0079221_102642554	3300006804	Agricultural Soil	MAEPSFGEQISTLNTTLRAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLGATVGEKGFQERFRIR
Ga0075424_1010051963	3300006904	Populus Rhizosphere	MAEPSFGDQISTLNSTLRAIEVRLALGRSPVEGLEDFKSSLDDMRIRLWGLLGATGGDQGFQERFRIRRATEMCRGL
Ga0079219_108702643	3300006954	Agricultural Soil	MAEPSFGEQISTLNTTLRAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLGATVGEKGFQERFRIRRATE
Ga0105106_101487504	3300009078	Freshwater Sediment	MAELSFLEQVATLNASLSETEQRLARGQAPVQELEDFKSALDDLRL
Ga0105243_105693193	3300009148	Miscanthus Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERFRIRRATEMCRGLGNDLRSGSVSG
Ga0126307_106123262	3300009789	Serpentine Soil	MAEPSFADQMATLNSTLGAIEVRLALGRAPVEGLEQFKSALDDMRLRLWGLLSAGGGPDTRSFQEQFRIQRA
Ga0126307_111583902	3300009789	Serpentine Soil	MGEPSFADQVSTLNSTLRAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLGAAGGEEHNY
Ga0126305_100356005	3300010036	Serpentine Soil	MAEPSFADQMATLNSTLGAIEVRLALGRAPVEGLEQFKSALDDMRLRLWGLLSAGGGPDTRSFQEQFRIQRATEMCRGLGSDFHAGSLSGR
Ga0126304_104171083	3300010037	Serpentine Soil	MAEPSFADQMATLNSTLGAIEVRLALGRAPSAGLERFKSALDDMRLRLWGLMSAGGSESRGFQELFRIRRATEM
Ga0126309_101057051	3300010039	Serpentine Soil	MTEPSFGEQVGILNVTLGAIEARLARGQAPIEGLEDFKSSLDDMRLRLWGLLSAAGGDDYSGFQERFRIRRATEMCRGLSGDLSAG
Ga0126309_106982831	3300010039	Serpentine Soil	MAELSFADQMATLNSTLGAIEVRLALGRAPVEGLEGFKSALDDMRLRLWGL
Ga0134125_114780631	3300010371	Terrestrial Soil	MAEPSLVEQVAILNAALSAIEERLARGHAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEMSRGLGG
Ga0134125_118001162	3300010371	Terrestrial Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAAGGEDYRNFQERFRIRRATEMCRGLGNDLR
Ga0134123_133604621	3300010403	Terrestrial Soil	MAEPSLVEQVAILNAALSAIEERLARGHAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEMSRG
Ga0138505_1000166243	3300010999	Soil	MAEPSFADLLSTLNTTLRAIEVRIALGRAPAEGLEDFKSALDDMRLRLWGLLGATTGAK
Ga0138514_1000565671	3300011003	Soil	MAEPSLIEQVAILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAAGCNDY
Ga0137442_10028861	3300011414	Soil	MAEPSFAEQMSTLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSGAGGS
Ga0137455_10925511	3300011429	Soil	MAELSFADQMSTLNSTLGAIEARLALGRAPVEGLEDFKSALDDMRLRLWGLLSASGGADSSGFQELF
Ga0136623_102999591	3300012045	Polar Desert Sand	MAEPSFSEQMATLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGTDSRGFQEL
Ga0136634_103865641	3300012046	Polar Desert Sand	MAEPTFVQQIATLSATLTTIEDSLAKGQAPVEGLEDFKSALDEVRLRLWGLLSAAGGDDYKGFQERFRIRRATELSR
Ga0136630_11030273	3300012529	Polar Desert Sand	MAEPSFLEQVATLNGTLTEVEQRLARGQIPVQELEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEMSRGL
Ga0136615_100595834	3300012678	Polar Desert Sand	MAEPSFLEQVATLNGTLTEVEQRLARGQTPVQELEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEMSRGLGGD
Ga0157304_10378163	3300012882	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAA
Ga0137395_111672203	3300012917	Vadose Zone Soil	MAEPNFADLIATLNSTLQDIEVRLARDQEPVEGLEDFKSALDDMRLRLWGLL
Ga0162652_1000681582	3300012941	Soil	MAEPSLVEQITGLNSTLTAIEGRLARGVTPVEGLEDFKSALDDMRLRLWGCRRTR*
Ga0164301_111143461	3300012960	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAA
Ga0164302_105539411	3300012961	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGTVGGDDYKNFQERFRIRRAT
Ga0157373_104032783	3300013100	Corn Rhizosphere	MAESSLVEQVAILNAALSAIEERLARGHAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQ
Ga0132258_121504364	3300015371	Arabidopsis Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERFRIRRATEMCRGLG
Ga0132255_1013875023	3300015374	Arabidopsis Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAAGGE
Ga0184610_12650091	3300017997	Groundwater Sediment	MAEPSFVEQVATLNATLSAIEERLARGQTPVEGLEDFKSALDDVRLRLWGLLSAAGGDDY
Ga0184605_100658341	3300018027	Groundwater Sediment	MAEPSLIEQVGILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAAGGDDYKGFQERFR
Ga0184623_101803471	3300018056	Groundwater Sediment	MAEPNFAEQMATLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGSDSRGFQEQFRIRRATEMCRGLGDELQGGS
Ga0184619_101467891	3300018061	Groundwater Sediment	MAEPSFAEQIATLNSTLRAIEVRLAFGRAPVEGLEDFKGALDDMRLRLWGLLGAAGGEDSRGFQERFRIRR
Ga0184637_102207101	3300018063	Groundwater Sediment	MAEPSFADQMSTLNSTLRAIEVRLALGRAPVEGLEDFKSGLDDMRLRLWGLLSASGGSDSRGFQEQFRIRRATEMCRGLGDDLKSGSI
Ga0184631_103224501	3300018070	Groundwater Sediment	MAEPSFAEQVATLNATLSAIEERLARGQAPVQGLEDFKSALDDVRLRLWGLLSAAGG
Ga0184618_104787132	3300018071	Groundwater Sediment	MAEPSFAQQIATLNSTLRGIEVRLALGRPPVEGFEEFKNVLDEMRHRLWDLLSLTDDE
Ga0184633_103477002	3300018077	Groundwater Sediment	MAEPSFVEQVATLNATLSAIEERLARGLAPVEGLEDFKSGLEDVRLRLWGLLSAAGGDDYKGFQERFRIRRATE
Ga0184639_102604021	3300018082	Groundwater Sediment	MAEPNFAEQMATLNSTLGAIEVRLALGRAPVEGLENFKSALDDMRLRLWGLLSA
Ga0190272_116957131	3300018429	Soil	MAEPSFSEQMSTLNSTLGAIEVRLALGRAPVEGLEDFKSSLDDMRLRLWGLLSAAGGSD
Ga0190272_129846732	3300018429	Soil	MAEPSFLEQIATLNTTLSDVEGQLARGQTAVQDLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIR
Ga0190268_102582501	3300018466	Soil	MGEPSFQQQVATLNATLGVIEESLARGNAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQER
Ga0190273_112689751	3300018920	Soil	MAEPSFADHVSTLNSTLRAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGL
Ga0190273_120571851	3300018920	Soil	MGEPSFQQQVATLNATLSLIEETLAKGKAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATE
Ga0184642_15795381	3300019279	Groundwater Sediment	MVEPSFGDQMASLNSTLRSIEVRLALGRAPVEGLEDFNSSLDDMRLRLWGLLSAAG
Ga0184642_16063012	3300019279	Groundwater Sediment	MAEPSFAQQIANLNSTLRGIEVRLALGRPPAEGFEEFKNLLDDMRHRLWDLLSL
Ga0190264_102001551	3300019377	Soil	MAEPSFADQMATLNSTLGAIEVRLALGRAPVEGLESFKSALDDIRLRLWGLLSADGGPDSRG
Ga0193748_10112812	3300019865	Soil	MAEPSLIEQVAILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRL
Ga0193716_12246772	3300020061	Soil	MAELSFGEQMSTLNSTLGAIEARLALGRAPVEGLEDFKSALDDMRLRLW
Ga0210381_100748141	3300021078	Groundwater Sediment	MVEPSFGDQMASLNSTLRSIEVRLALGRAPVEGLEDFKSSLDDMRLRLWGLLSAAGGKEE
Ga0210381_102642681	3300021078	Groundwater Sediment	MAEPSFGEQMASLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGADARGFQEQFRIRRATEMCRVLGD
Ga0210377_103602121	3300021090	Groundwater Sediment	MAEPSFAEQMATLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGSKGFQ
Ga0210377_106251772	3300021090	Groundwater Sediment	MAEPSFLEQVATLNATLSAIEERLARGQAPVQGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEMSRGLGGDLRTGAIS
Ga0193719_103015652	3300021344	Soil	MAEPSFGEQMASLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGADARGFQEQ
Ga0193695_10430253	3300021418	Soil	MAEPSLIEQVGILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAA
Ga0247745_10397471	3300022898	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERFRI
Ga0209431_107382521	3300025313	Soil	MAEPSFAEQVATLNATLSAIEERLARGQAPVEGLEDFKSALDDVRLRLWGLLSAA
Ga0207644_118578431	3300025931	Switchgrass Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGL
Ga0208777_10258501	3300025996	Rice Paddy Soil	MPEPSLADQMASLNSTLRVIEVRLALSRPPVEGLEEFRIILDDMRLRLWGLLGAIGGDYQDLQERFRIRRAIELCRGL
Ga0207675_1015564532	3300026118	Switchgrass Rhizosphere	MPDPSFVDLIATLNSTLQRIEGRLAPGQEPVEGLEDFKSALDDMRLRLWGLLSATGGS
Ga0209486_103269543	3300027886	Agricultural Soil	MAKPSFEQQVATLNATLNAIEESLAGGKAAVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRR
Ga0209705_103529161	3300027979	Freshwater Sediment	MAELSFLEQVATLNASLNEIEERLARGQTAVQELEDFKSALDDVRLRLWGLLSAAGGDD
Ga0247749_10460201	3300027993	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPSEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERFRIR
Ga0268264_107923041	3300028381	Switchgrass Rhizosphere	MPEPSFADQIATLNSTLRAIEVRMALGRAPVEDLEDFKGALDDMRLRLWGLLGAAGGED
Ga0307293_100887001	3300028711	Soil	MAEPSFGEQMASLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAAGGADARGFQEQFRIRRATEMCRGLGDELKSGSVSGR
Ga0307311_100161345	3300028716	Soil	MAEPSFVDQVATLNATLNAIEERMAGGEAPIEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIR
Ga0307307_100405313	3300028718	Soil	MAEPSLIEQVGILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAAGGDDYKGFQERFRIRRATEMCRGLSGDLR
Ga0307282_100308881	3300028784	Soil	MAEPSLIEQVSILNSTLTAIEGRLARGQAPVEGLEDFKSSLDDMRLRLWGLLSAAGGDDY
Ga0307284_100724033	3300028799	Soil	MAEPSLIEQVSILNSTLTAIEGRLARGQAPVEGLEDFKSSLDDMRLRLWGLLSAAGGDDYKGFQERF
Ga0307281_100253445	3300028803	Soil	MAEPSFVEQVATLNATLSAIEERLARGLAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATE
Ga0307305_100188615	3300028807	Soil	MAEPSLIEQVGILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAAGG
Ga0307310_100271924	3300028824	Soil	MAEPSLIEQVSILNSTLTAIEGRLARGQAPVEGLEDFKSSLDDMRLRLWGLLSAAGGDDYKGFQERFRIRRATEMCRG
Ga0307310_102409452	3300028824	Soil	MAEPNLVEQVSILNSTLTAIEGRLAGGQVPVEGLEDFKSALDDMRLRLWGLLSAAGGDDYRGFQERFRI
Ga0307312_101358471	3300028828	Soil	MAEPSLIEQVGILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAAGGDDYKGFQ
Ga0307312_107916462	3300028828	Soil	MVEPSFGDQMASLNSTLRSIEVRLALGRAPVEGLEDFKSSLDDMRLRLWGLLSAAGGKEEHTFQELFRIRRATEMSRALGGELKAG
Ga0299907_105083721	3300030006	Soil	MAEPSFADQMAALNSTLGAIEVRLALGRAPAEGLESFKSSLDDMRLRLWGLLSASGGKDARGFQEQF
Ga0302046_111582122	3300030620	Soil	MAEPSFAEQMATLNSTLGAIEVRMALGRAPVEGLEDFKSSLDDMRLRLWGLLSAAGGSDSKAFQ
Ga0308198_10274572	3300030904	Soil	MAEPSLIEQVGILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAAGGDDYKGFQERFRIRRATEMCRGLSETSGPGL
Ga0308189_103178772	3300031058	Soil	VSPDGDPGAEPSFSQQIALLNSTLRAIEVRLALGRPAEDGFEDFTRMLDDMRHRLWALLS
Ga0308187_102258782	3300031114	Soil	MAEPSFADQISTLNSTLRAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLGAAGGDDYKVFQERFRIRRATEMCRGLGGD
Ga0299913_118595701	3300031229	Soil	MAEPSFAHQMATLNSTLGAIEVRLALGRAPVEELGDFKSALDDVRLRLWGLLSAGGGPDSRGFQEQFRIRRATEMCRALG
Ga0308194_102295131	3300031421	Soil	MAEPSFGEQMASLNSTLGAIEVRLALGRAPVEGLEDFKSALDDMRLRLWGLLSAA
Ga0308194_102908482	3300031421	Soil	VSPDGGPGAEPSFSQQIALLNSTLRAIEVRLALGRPAEDGFEDFTRMLDDMRHRLWALLSTTNNDYKSF
Ga0307408_1012629222	3300031548	Rhizosphere	MAEPSFQQQVATLNATLNVMEESLARGSAPVDGLEEFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRR
Ga0307408_1022860911	3300031548	Rhizosphere	MAEPSFADQMATLNSTLGAIEVRLALGRAPVDSLESFKSALDDMRLRLWG
Ga0307468_1017610402	3300031740	Hardwood Forest Soil	MAEPSFVEQVATLNATLSAIEERLARGLAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIRRATEM
Ga0307473_114287711	3300031820	Hardwood Forest Soil	MAEPSLIEQVGILNSTLTAIEGRLARGQAPVEGLEDFKSALDDMRLRLWGLLSAAGGSDYKGFQ
Ga0307413_100555774	3300031824	Rhizosphere	MAEPSFADQMATLNSTLGAIEVRLALARAPVEGLESFKSALDDMRLRLWGLLSAGGGPDSRGFQEQFRIRRATEMCRKLGT
Ga0307406_102606831	3300031901	Rhizosphere	MGEPSFQQQVATLNATLSVIEERLARGNAPVEGLDDFKSALDDVRLRLWGLLSAAGG
Ga0307407_109868692	3300031903	Rhizosphere	MAEPSFADQMATLNSTLGAIEVRLALGRAPVEGLESFKSALDDIRLRLWGLLSADGGPDSRGFQEQFRIRRATEMCRKLGT
Ga0307412_102908551	3300031911	Rhizosphere	MGEPSFQQQVATLNATLSVIEESLARENAPVEGLEDFKSALDDVRLRLWGLLSAAGGDDYKGFQERFRIR
Ga0310901_101946443	3300031940	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAAGGEDYKNFQERF
Ga0310885_100679671	3300031943	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAAGGEDYKNFQERFR
Ga0307409_1025933431	3300031995	Rhizosphere	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLLGAAGGDDYKNFQERFRIRRAR
Ga0310903_107522102	3300032000	Soil	MGEPSFGEHVATLNSTLRAIEVRLALGKAPVEGLEDFKSALDDMRLRLWGLL
Ga0307415_1014059391	3300032126	Rhizosphere	MAEPSFADQMATLNSTLGAIEVRLALGRAPVEGLESFKSALDDMRLRLWGILSAVRGPDSRGFQEQFRIRRATEMCRRLGTELHAGSVSGRHP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073387

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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