Metagenome / Metatranscriptome Family F073374

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073374
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	73 residues
Representative Sequence	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRVSDDPDWPLRHPRFVGVLRFD
Number of Associated Samples	91
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.67 %
% of genes near scaffold ends (potentially truncated)	30.83 %
% of genes from short scaffolds (< 2000 bps)	72.50 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.667 % of family members)
Environment Ontology (ENVO)	Unclassified (55.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.22% β-sheet: 34.25% Coil/Unstructured: 57.53%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF07978	NIPSNAP	27.50
PF00486	Trans_reg_C	23.33
PF01180	DHO_dh	20.00
PF01014	Uricase	1.67
PF10418	DHODB_Fe-S_bind	1.67
PF00576	Transthyretin	1.67
PF12903	DUF3830	0.83
PF09349	OHCU_decarbox	0.83
PF00211	Guanylate_cyc	0.83
PF12681	Glyoxalase_2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	20.00
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	20.00
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	20.00
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	20.00
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	20.00
COG2351	5-hydroxyisourate hydrolase (purine catabolism), transthyretin-related family	Nucleotide transport and metabolism [F]	1.67
COG3648	Uricase (urate oxidase)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.67
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.17 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	62.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	41.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.33 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	41.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_126375397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	881	Open in IMG/M
3300002915\|JGI25387J43893_1047540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300005166\|Ga0066674_10009757	All Organisms → cellular organisms → Bacteria	3936	Open in IMG/M
3300005166\|Ga0066674_10030790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2371	Open in IMG/M
3300005166\|Ga0066674_10532070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300005167\|Ga0066672_10012873	All Organisms → cellular organisms → Bacteria	4117	Open in IMG/M
3300005171\|Ga0066677_10050130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2085	Open in IMG/M
3300005171\|Ga0066677_10360329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	833	Open in IMG/M
3300005172\|Ga0066683_10259899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1077	Open in IMG/M
3300005172\|Ga0066683_10284544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1027	Open in IMG/M
3300005172\|Ga0066683_10698242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300005174\|Ga0066680_10026272	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300005174\|Ga0066680_10249725	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005175\|Ga0066673_10021125	All Organisms → cellular organisms → Bacteria	3002	Open in IMG/M
3300005177\|Ga0066690_10776649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300005178\|Ga0066688_10010669	All Organisms → cellular organisms → Bacteria	4512	Open in IMG/M
3300005178\|Ga0066688_10016352	All Organisms → cellular organisms → Bacteria	3818	Open in IMG/M
3300005179\|Ga0066684_10451737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	864	Open in IMG/M
3300005186\|Ga0066676_10031795	All Organisms → cellular organisms → Bacteria	2875	Open in IMG/M
3300005444\|Ga0070694_100352518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1140	Open in IMG/M
3300005445\|Ga0070708_100124278	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300005446\|Ga0066686_10198365	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300005451\|Ga0066681_10675077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	631	Open in IMG/M
3300005454\|Ga0066687_10222842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300005555\|Ga0066692_10930500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	532	Open in IMG/M
3300005558\|Ga0066698_10453453	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300005560\|Ga0066670_10327841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	933	Open in IMG/M
3300005569\|Ga0066705_10174571	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300005576\|Ga0066708_10018258	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300005598\|Ga0066706_10112977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1993	Open in IMG/M
3300006032\|Ga0066696_10092055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1804	Open in IMG/M
3300006032\|Ga0066696_10976232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300006034\|Ga0066656_10157142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1425	Open in IMG/M
3300006791\|Ga0066653_10098061	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300006794\|Ga0066658_10333218	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300006954\|Ga0079219_12274250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300009012\|Ga0066710_100493886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1843	Open in IMG/M
3300009012\|Ga0066710_101318881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1119	Open in IMG/M
3300009012\|Ga0066710_103862735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	562	Open in IMG/M
3300009090\|Ga0099827_10393601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1184	Open in IMG/M
3300010076\|Ga0127430_166173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300010301\|Ga0134070_10220124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300010303\|Ga0134082_10455599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300010323\|Ga0134086_10041521	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300010326\|Ga0134065_10001694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5258	Open in IMG/M
3300010333\|Ga0134080_10443066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	608	Open in IMG/M
3300012198\|Ga0137364_10032778	All Organisms → cellular organisms → Bacteria	3331	Open in IMG/M
3300012198\|Ga0137364_10040312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3050	Open in IMG/M
3300012198\|Ga0137364_10127678	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300012200\|Ga0137382_10141104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1626	Open in IMG/M
3300012203\|Ga0137399_10652394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	885	Open in IMG/M
3300012205\|Ga0137362_10349154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1281	Open in IMG/M
3300012206\|Ga0137380_10022865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5747	Open in IMG/M
3300012208\|Ga0137376_10002754	All Organisms → cellular organisms → Bacteria	10660	Open in IMG/M
3300012208\|Ga0137376_10219218	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300012209\|Ga0137379_10337887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1416	Open in IMG/M
3300012210\|Ga0137378_10347721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1378	Open in IMG/M
3300012211\|Ga0137377_10260966	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300012349\|Ga0137387_10661046	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012918\|Ga0137396_11047323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300012925\|Ga0137419_11382534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300012929\|Ga0137404_11343144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300012944\|Ga0137410_10097674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2173	Open in IMG/M
3300012977\|Ga0134087_10540490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	593	Open in IMG/M
3300014150\|Ga0134081_10080070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1008	Open in IMG/M
3300015054\|Ga0137420_1015131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300017656\|Ga0134112_10243650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300018000\|Ga0184604_10151410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	765	Open in IMG/M
3300018027\|Ga0184605_10017311	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300018027\|Ga0184605_10020208	All Organisms → cellular organisms → Bacteria	2662	Open in IMG/M
3300018027\|Ga0184605_10138683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1090	Open in IMG/M
3300018061\|Ga0184619_10435082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300018071\|Ga0184618_10096673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1153	Open in IMG/M
3300018431\|Ga0066655_10016139	All Organisms → cellular organisms → Bacteria	3376	Open in IMG/M
3300018431\|Ga0066655_10065366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1930	Open in IMG/M
3300018468\|Ga0066662_10438410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1164	Open in IMG/M
3300018468\|Ga0066662_11097979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	795	Open in IMG/M
3300018482\|Ga0066669_10045261	All Organisms → cellular organisms → Bacteria	2736	Open in IMG/M
3300018482\|Ga0066669_10363376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1209	Open in IMG/M
3300018482\|Ga0066669_11067819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	729	Open in IMG/M
3300019279\|Ga0184642_1517291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	691	Open in IMG/M
3300019885\|Ga0193747_1001473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6363	Open in IMG/M
3300019885\|Ga0193747_1003510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3860	Open in IMG/M
3300020015\|Ga0193734_1060835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300021080\|Ga0210382_10001676	All Organisms → cellular organisms → Bacteria	7357	Open in IMG/M
3300021080\|Ga0210382_10003009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5473	Open in IMG/M
3300025910\|Ga0207684_10086361	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300025922\|Ga0207646_10841026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	816	Open in IMG/M
3300026300\|Ga0209027_1038219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1810	Open in IMG/M
3300026300\|Ga0209027_1051474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1544	Open in IMG/M
3300026300\|Ga0209027_1319927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300026305\|Ga0209688_1078525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	596	Open in IMG/M
3300026305\|Ga0209688_1079577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300026306\|Ga0209468_1171404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300026315\|Ga0209686_1028657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2154	Open in IMG/M
3300026322\|Ga0209687_1091145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	991	Open in IMG/M
3300026322\|Ga0209687_1172238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	683	Open in IMG/M
3300026324\|Ga0209470_1115382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1196	Open in IMG/M
3300026326\|Ga0209801_1001281	All Organisms → cellular organisms → Bacteria	15617	Open in IMG/M
3300026328\|Ga0209802_1284404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300026343\|Ga0209159_1087372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1387	Open in IMG/M
3300026343\|Ga0209159_1158230	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300026523\|Ga0209808_1010594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4669	Open in IMG/M
3300026530\|Ga0209807_1000148	All Organisms → cellular organisms → Bacteria	29849	Open in IMG/M
3300026537\|Ga0209157_1071670	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300026548\|Ga0209161_10064459	All Organisms → cellular organisms → Bacteria	2328	Open in IMG/M
3300026548\|Ga0209161_10541287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300027882\|Ga0209590_10223329	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300027882\|Ga0209590_10311786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1011	Open in IMG/M
3300028536\|Ga0137415_10022715	All Organisms → cellular organisms → Bacteria	6200	Open in IMG/M
3300028715\|Ga0307313_10020313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1799	Open in IMG/M
3300028771\|Ga0307320_10342368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300028799\|Ga0307284_10033740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1727	Open in IMG/M
3300028814\|Ga0307302_10057091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1821	Open in IMG/M
3300028819\|Ga0307296_10176469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1158	Open in IMG/M
3300028881\|Ga0307277_10000353	All Organisms → cellular organisms → Bacteria	16644	Open in IMG/M
3300028881\|Ga0307277_10116654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1142	Open in IMG/M
3300031114\|Ga0308187_10323989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	586	Open in IMG/M
3300031421\|Ga0308194_10242356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	601	Open in IMG/M
3300031820\|Ga0307473_10149842	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.50%
Aquatic	Environmental → Aquatic	7.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.50%
Sediment	Environmental → Aquatic → Sediment	5.00%
Freshwater	Environmental → Aquatic → Freshwater	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.83%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.50%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010076	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1263753972	3300000956	Soil	MNGELSPGTYRAKNGDLIHCHDDFEGHSQIQVEHGDGSTTWADPTALRDAVRVSDDPDWPLRNPRFVGVIRFD*
JGI25387J43893_10475401	3300002915	Grasslands Soil	MNGELSPGTYRARNGDLIHCRDDRGGHSEIEVEHRDGSMTGADLTALRDAVRVSDDPDWPLRHPRFIGVVRFD*
Ga0066674_100097576	3300005166	Soil	MNGELSPGTYRAKNGELIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066674_100307904	3300005166	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD*
Ga0066674_105320701	3300005166	Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRISDDPDWPLRHPRFVGVLRFD*
Ga0066672_100128733	3300005167	Soil	MNGELAPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVGLLRFG*
Ga0066677_100501304	3300005171	Soil	KNGDLIHCRDDFEGHSQIQIEHSDGSTTWADLTAVRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066677_103603292	3300005171	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066683_102598993	3300005172	Soil	MNGELSPGTYRAKNGDLVHCRDDSNGRSQVEVEHHDGSVTWADVTALRDAIRVSDDPDWPLRHPRFVGVIRFD*
Ga0066683_102845442	3300005172	Soil	MNGELAPGTYRAKNGDFIHCHDDYEGHSQIDVEHGDGSRTSVDMTVLRDAVRVSDDPEWPLAHPRFVGVMRFD*
Ga0066683_106982422	3300005172	Soil	MNGERSPGTYRAKNGDLIHCRDDSDGRSQVEVEHHDGSVTWADMTALRDAVRISDDPDWPLRHPRFVGVLRFD*
Ga0066680_100262722	3300005174	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSMTWADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066680_102497252	3300005174	Soil	MNGELSPGTYRAKNGDLIHCRDDSDGRSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLSHPRFVGVLRFD*
Ga0066673_100211254	3300005175	Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADATAVRGAIRVSDDPDWPLRHPRFTGVIRFD*
Ga0066690_107766492	3300005177	Soil	PPDLAHWGGGKVMNGELSPGTYRARNGDLIHCRDDRGGHSEIEVEHRDGSMTGADLTALRDAVRVSDDPDWPLRHPRFIGVVRFD*
Ga0066688_100106696	3300005178	Soil	EDDRSPPDLAHWGGGKVMNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066688_100163523	3300005178	Soil	MNGELVPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVGLLRFG*
Ga0066684_104517371	3300005179	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDHPDWPLRHPRFVGFLRFD*
Ga0066676_100317953	3300005186	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVGLLRFG*
Ga0070694_1003525183	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNGELSPGTYRAKNGDLIHCHDDFEGHSQIQVEHGDGSTTWADPTALRDAVRVSDDPEWPLRHPRFVGVIRFD*
Ga0070708_1001242783	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNGELSPGTYRAKNGDLIHCRDDFEGRGQIEVEHGDGSTTWADLTALRGAVRVSDDPDWPLRHPRFVGVLRFD*
Ga0066686_101983652	3300005446	Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLRHPRFVGVLRFD*
Ga0066681_106750771	3300005451	Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADATAVRGAIRVSDDPDWPLRHPRFTG
Ga0066687_102228422	3300005454	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQIEHSDGSTTWADLTAVRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066692_109305002	3300005555	Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHDDGSVTWADMTALRDAVRISNDPDWPLSHPRFVGVL
Ga0066698_104534533	3300005558	Soil	YRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLRHPRFVGVLRFD*
Ga0066670_103278411	3300005560	Soil	IRSPPDLAQGKGRGMNGELSPGTYRAKNGDLIHCRDDWVGRSQVEVEHHDGSVTWADVTAVRGAIRVSDDPDWPLRHPRFTGVIRFD*
Ga0066705_101745711	3300005569	Soil	GTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVGLLRFG*
Ga0066708_100182585	3300005576	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQVDVEHSDGSMSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD*
Ga0066706_101129771	3300005598	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTWADLTAVRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066696_100920554	3300006032	Soil	PGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD*
Ga0066696_109762322	3300006032	Soil	SPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0066656_101571422	3300006034	Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLSHPRFVGVLRFD*
Ga0066653_100980612	3300006791	Soil	MNGERSPGTYRAKNGDLIHCRDDSDGRSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLRHPRFVGVLRFD*
Ga0066658_103332181	3300006794	Soil	RGQGMNGELVPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVRLLRFG*
Ga0079219_122742502	3300006954	Agricultural Soil	MNGELTPGTYRAKNGDLIHCRDDFEGHTQVEVENDDGSMTMADVTLLRGAVRLSDDPEWPARHPRFVALLRFD*
Ga0066710_1004938862	3300009012	Grasslands Soil	MNGELSPGTYRAKNGDLVHCRDDSNGRSQVEVEHHDGSVTWADVTALRDAIRVSDDPDWPLRHPRFVGVIRFD
Ga0066710_1013188812	3300009012	Grasslands Soil	MNGERSPGTYRAKNGDLIHCRDDSDGRSQVEVEHHDGSVTWADMTALRDAVRISDDPDWPLRHPRFVGVLRFD
Ga0066710_1038627351	3300009012	Grasslands Soil	MNGELVPGTYRAKNGDLIHCRDDFEGHSEVEIEHHDGSLTRADVTVLREAVRVSDDPDWPLRNTP
Ga0099827_103936012	3300009090	Vadose Zone Soil	MPGTYRARNGDLIHCDDVQGRALVDVEHPDGSLTWADVTVLREAVRVSDDPDWPLRRPRFIGVLNFD*
Ga0127430_1661731	3300010076	Grasslands Soil	EGDRRPPDLAHWGGGKVMNGELSPGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD*
Ga0134070_102201241	3300010301	Grasslands Soil	WAGGKAMNGELSPRTSRVKNGDLIHCRADFEGHSQIQVEHRDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD*
Ga0134082_104555991	3300010303	Grasslands Soil	MNGELAPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFFGLLRFG*
Ga0134086_100415213	3300010323	Grasslands Soil	MNGELATGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD*
Ga0134065_100016942	3300010326	Grasslands Soil	MNGELSPGTYRANNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD*
Ga0134080_104430662	3300010333	Grasslands Soil	TYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD*
Ga0137364_100327786	3300012198	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADVTAVRGAIRVSDDPDWPLRHPRFTGVIRFD*
Ga0137364_100403122	3300012198	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDFKGHSQIEVEHRDGSTTWADLTAILDAVRVSDDPDWPLRHPRFVGVLRFD*
Ga0137364_101276782	3300012198	Vadose Zone Soil	MNGELSPGTYRAKNGELIHCRDDFEGHSAVEIEHHDGSLTRADVTVLREAVRVSDDPDWPLGNTRMIGILRFD*
Ga0137382_101411043	3300012200	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADVTAVRGAVRVSDDPDWPLRHPRFTGVIRFD*
Ga0137399_106523942	3300012203	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADVTALRDAIRVSDDPDWPLRHPRFVGVIRFD*
Ga0137362_103491542	3300012205	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSDGRSQVEVEHHDGSVTWADMTALRDAVRISDDPDWPLRHPRFVGVLRFD*
Ga0137380_100228653	3300012206	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDFDGGSQVEVEHHDGSVTWADMTALRDAVRVSDDPDWPLRHPRFVGMLRFD*
Ga0137376_100027543	3300012208	Vadose Zone Soil	MNGELAPGTYRAKNGDLIHCRDDFEGHSAVEIEHHDGSLTRADVTVLREAVRVSDDPDWPLGNTRMIGILRFD*
Ga0137376_102192182	3300012208	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRVSDDPDWPLRHPRFVGVLRFD*
Ga0137379_103378872	3300012209	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVIRFD*
Ga0137378_103477212	3300012210	Vadose Zone Soil	MSGERSPGTYRAKNGDLIHCRDDFDGGSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLRHPRFVGVLRFD*
Ga0137377_102609661	3300012211	Vadose Zone Soil	NGERSPGTYRAKNGDLIHCRDDSDGRSQVEVEHHDGSVTWADMTALRDAVRISDDPDWPLRHPRFVGVLRFD*
Ga0137387_106610461	3300012349	Vadose Zone Soil	GTYRAKNGDLIHCRDDFDGGSQVEVEHHDGSVTWADMTALRDAVRISDDPDWPLRHPRFVGMLRFD*
Ga0137396_110473231	3300012918	Vadose Zone Soil	MNGELSPGTYRARNGDLIHCRDDREGHSEIEVEHRDGSMTGVDLTALRDAVRVSDDPDWPLRHPRFIGVVRFD*
Ga0137419_113825342	3300012925	Vadose Zone Soil	DLAHWGGGKVMNGELSPGTYRARNGDLIHCRDDREGHSEIEVEHRDGSMTGADLTALRDAVRVSDDPDWPLRHPRFIGVVRFD*
Ga0137404_113431442	3300012929	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSQGHSQVEVEHHDGSTTWADMTALRDAVRVSDDPDWPLRHPRFLGVVRFD*
Ga0137410_100976743	3300012944	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSLTWADVTALRDAIRVSDDPDWPLRHPRFVGVIRFD*
Ga0134087_105404902	3300012977	Grasslands Soil	MNGELVPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHP
Ga0134081_100800701	3300014150	Grasslands Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQIEHSDGSTTWADLTAIRDAVRVSDDPDWPLRHP
Ga0137420_10151311	3300015054	Vadose Zone Soil	MNGELSPGTYRARNGDLIHCRDDREGHSEIEVEHRDGSMTGADLTALRDAVRVSDDPDWPLRHPRFIGVVRFD*
Ga0134112_102436502	3300017656	Grasslands Soil	EDDRSPPDLAHWGGGKVMNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0184604_101514103	3300018000	Groundwater Sediment	MNGQLSPGTYRAKNGDLIHCRDDLNGRSQVEVEHGDGSMTWADMTAVRDAVRVSDDPDWPLRHSRIVGVLRFD
Ga0184605_100173113	3300018027	Groundwater Sediment	MNGELSPGTYRAKNGDLIHCRDDSAGRSQVEVEHHDGSVTWADVTALRDAIRVSDDPDWPLRHPRFVGVVRFD
Ga0184605_100202082	3300018027	Groundwater Sediment	MNGELAPGTYRAKNGDLIHCRDDFEGHSQVEIEHHDGSLTRADVTVLREAVRVSDDPDWPLRNTRVVGILRFD
Ga0184605_101386832	3300018027	Groundwater Sediment	MNGELAPGTYRAKNGDLIHCRDDFEGHSAVEIEHHDGSLTRADVTVLREAVRVSDDPDWPLGNTRLIGILRFD
Ga0184619_104350821	3300018061	Groundwater Sediment	QGMNGELAPGTYRAKNGDLIHCRDDFEGHSAVEIEHHDGSLTRADVTVLREAVRVSDDPDWPLRNTRLIGILRFD
Ga0184618_100966731	3300018071	Groundwater Sediment	MNGELSQGTYRAKNGDLIHCRDDSEGRSQVEIEHHDGSVTWADVTALRHAVRVSDDPDWPLRHPRFVGEVRFD
Ga0066655_100161394	3300018431	Grasslands Soil	MNGELAPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVGLLRFG
Ga0066655_100653662	3300018431	Grasslands Soil	MNGELSPGTYRAKNGELIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0066662_104384102	3300018468	Grasslands Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSMTWADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0066662_110979792	3300018468	Grasslands Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0066669_100452614	3300018482	Grasslands Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD
Ga0066669_103633762	3300018482	Grasslands Soil	MNGELAPGTYRAKNGDLIHCRDDVEGRSQVEIEHHDGSMTWADLAVLHDAVRVSDDPDWPLLHPRFLGVLRFD
Ga0066669_110678192	3300018482	Grasslands Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADVTAVRGAIRVSDDPDWPLRHPRFTGVIRFD
Ga0184642_15172911	3300019279	Groundwater Sediment	VNGELSPGTYRAKNGDLIHCRDDQSGRSQVDVEHHDGSMTWADLTVLHDAVRVSDDPDWPLRHPRFPGVLRFD
Ga0193747_10014731	3300019885	Soil	MNGELAPGTFRAKNGDLIHCRSDLHGHTQVDVEHDDGSVTGADVTILSDAIRVSDDPDWPLRHPRFVGALRFD
Ga0193747_10035103	3300019885	Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADGTAVRGAIRVSDDPDWPLRHPRFTGVIRFD
Ga0193734_10608352	3300020015	Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADATAVRGAIRVSDDPDWPLRHPRFTGVIRFD
Ga0210382_100016769	3300021080	Groundwater Sediment	MNGELSPGTYRAKNGDLIHCRDDSAGHSQVEVEHHDGSVTWRTVTALRDAIRISDDPDWPLRHPRFVEVVRFD
Ga0210382_100030097	3300021080	Groundwater Sediment	MNGELSQGTYRAKNGDLIHCRDDSEGRSQVEIEHHDGSVTWADVTALRHAVRVSDDPDWPLRHPRFVREVRFD
Ga0207684_100863613	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNGELSPGTYRAKNGDLIHCHDDFEGHSQIQVEHGDGSTTWADPTALRDAVRVSDDPEWPLRHPRFVGVIRFD
Ga0207646_108410262	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNGELSPGTYRAKNGDLIHCRNDLEGRSQIEVEHGDGSTTWADLTALRGAVRVSDDPDWPLRHPRFVGVLRFD
Ga0209027_10382192	3300026300	Grasslands Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRTQVEVEHHDGSVTWADATAVRGAIRVSDDPDWPLRHPRFTGVIRFD
Ga0209027_10514742	3300026300	Grasslands Soil	MNGELSPGTYRARNGDLIHCRDDRGGHSEIEVEHRDGSMTGADLTALRDAVRVSDDPDWPLRHPRFIGVVRFD
Ga0209027_13199271	3300026300	Grasslands Soil	MNGELAPGTYRAKNGDLIHCRDDFEGRSQVEIEHHDGSMTWADVTVLHDAVRVSDDPDWPLRHPRFLGVVRFD
Ga0209688_10785251	3300026305	Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADATAVRGAIRVSDDPDWPLRHPRFT
Ga0209688_10795771	3300026305	Soil	SPGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD
Ga0209468_11714041	3300026306	Soil	KVMNGELSPGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD
Ga0209686_10286574	3300026315	Soil	PDLAHWGGGKVMNGELSPGTYRAKNGDLIHCRDDFEGHSQIQIEHSDGSTTWADLTAVRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0209687_10911451	3300026322	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQIQIEHSDGSTTWADLTAVRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0209687_11722383	3300026322	Soil	TYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVGLLRFG
Ga0209470_11153822	3300026324	Soil	MNGELAPGTYRAKNGDFIHCHDDYEGHSQIDVEHGDGSRTSVDMTVLRDAVRVSDDPEWPLAHPRFVGVMRFD
Ga0209801_10012816	3300026326	Soil	MNGELVPGTYRAKNGDLIHCRDDFEGHTAVEVEHDDGSSTEADMSILRGAVRISDDPDRPARHPRFVGLLRFG
Ga0209802_12844042	3300026328	Soil	PGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSMTWADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0209159_10873724	3300026343	Soil	GKVMNGELSPGTYRAKNGDLIHCRDDFEGHSQIDVEHSDGSTSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD
Ga0209159_11582303	3300026343	Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRISDDPDWPLRHPRFVGVLRFD
Ga0209808_10105947	3300026523	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQVDVEHSDGSMSWADLTALRGAVRVSDDPDWPLRHPRFIGVLRFD
Ga0209807_100014810	3300026530	Soil	MNGELSPGTYRAKNGDLIHCRDDFEGHSQVQVEHSDGSTTWADLTAVRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0209157_10716701	3300026537	Soil	ELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTLADLTAIRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0209161_100644593	3300026548	Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLSHPRFVGVLRFD
Ga0209161_105412872	3300026548	Soil	GGKVMNGELSPGTYRAKNGDLIHCRDDFEGHSQIQVEHSDGSTTWADLTAVRDAVRVSDDPDWPLRHPRFVGFLRFD
Ga0209590_102233293	3300027882	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADMTALRDAVRISNDPDWPLRHPRFVGVLRFD
Ga0209590_103117862	3300027882	Vadose Zone Soil	MPGTYRARNGDLIHCDDVQGRALVDVEHPDGSLTWADVTVLREAVRVSDDPDWPLRRPRFIGVLNFD
Ga0137415_100227153	3300028536	Vadose Zone Soil	MNGELSPGTYRAKNGDLIHCRDDSEGRSQVEVEHHDGSVTWADVTALRDAIRVSDDPDWPLRHPRFVGVIRFD
Ga0307313_100203132	3300028715	Soil	MNGELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADGTAVRGAIRVSDDPDWPLRHPRFNGVIRFD
Ga0307320_103423682	3300028771	Soil	RVMNGPLSPGTYRAKNGDLIHCRDDLNGRSQVEVEHGDGSMTWADMTAVRDAVRVSDDPDWPLRHSRIVGVLRFD
Ga0307284_100337405	3300028799	Soil	GELSPGTYRAKNGDLIHCRDDSVGRSQVEVEHHDGSVTWADGTAVRGAIRVSDDPDWPLRHPRFTGVIRFD
Ga0307302_100570912	3300028814	Soil	MNGELSPGTYRAKNGDLIHCRDDSAGHSQVEVEHHDGSVTWADVTALRDAIRISDDPDWPLRHPRFVEVVRFD
Ga0307296_101764693	3300028819	Soil	GTYRAKNGDLIHCRDDQSGRSQVEVEHDDGTMTWADLTVLRDAVRVSDDPDWPLRHPRFVGVLRFD
Ga0307277_100003532	3300028881	Soil	MNGELSPGTYRAKNGDLIHCRDDLNGRSQVEVEHHDGSTTWADVTALRDAVRVSDDPDWPLRHPRFVGVLRFD
Ga0307277_101166541	3300028881	Soil	MNGELSPGTYRARNGDLIHCRDDSVGRSQVEVEHHDGSLTWADMTALRDAVRVSDDPDWPLRRPRFTGVIRFD
Ga0308187_103239891	3300031114	Soil	MNGELAPGTYRAKNGDLIHCRDDFEGHSAVEIEHHDGSLTRGDITVLRGAVRVSDNPDWPLRN
Ga0308194_102423562	3300031421	Soil	MNGELAPGTYRAKNGDLIHCRDDFEGHSAVEIEHHDGSLTRADVTVLREAVRVSDDPDWPLGNTRL
Ga0307473_101498422	3300031820	Hardwood Forest Soil	MNGELSPGTYRAKNGDLIHCRDDFEGRSQIEVEHGDGSTTWADLTALRGAVRVSDDPDWPLRHPRFVGVLRFD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073374

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences