Metagenome Family F073370

Basic Information
Family ID	F073370
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	52 residues
Representative Sequence	IGFVLFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRQH
Number of Associated Samples	95
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.333 % of family members)
Environment Ontology (ENVO)	Unclassified (27.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.95% β-sheet: 0.00% Coil/Unstructured: 46.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00583	Acetyltransf_1	13.33
PF00296	Bac_luciferase	12.50
PF12769	PNTB_4TM	1.67
PF12831	FAD_oxidored	0.83
PF00005	ABC_tran	0.83
PF01855	POR_N	0.83
PF02233	PNTB	0.83
PF03473	MOSC	0.83
PF02775	TPP_enzyme_C	0.83
PF01810	LysE	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	12.50
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.83
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.83
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.83

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.50%
Host-Associated	Host-Associated	7.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.33%
Plants	Host-Associated → Plants	7.50%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.67%
Sediment	Environmental → Aquatic → Sediment	2.50%
Freshwater	Environmental → Aquatic → Freshwater	1.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.83%
Loam	Environmental → Terrestrial → Soil → Loam	22.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25390J43892_101529862	3300002911	Grasslands Soil	ILGISGRDYFGPVGKAALPVLLILVGVILLVRSIQRSRQT*
Ga0066674_103754762	3300005166	Soil	ELRTGRTLLFIGLMIFLIGFVLFESILGISGRDYFGPIGKAALPVLLILVGVILLVRSIQRSRQA*
Ga0066683_100144891	3300005172	Soil	LFESILGISGRDAFGPLGKAALPLLLILVGVILLVRSMQRSRQA*
Ga0070703_104627901	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	IFATIFRISDMDYGWFGKAALPALLIVVGLVLLARSIQRGRAA*
Ga0070705_1010199102	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FVVFETILHISGIDYGWFGKAALPALLIIIGLVLLMRSLQRGRQQASGTKL*
Ga0066686_101917501	3300005446	Soil	FESILGISGRDAFGPLGKAALPLLLILVGVILLVRSMQRSRQA*
Ga0070706_1007977292	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MILFVLFETILHIRGIDYGWFGKAALPALLIVIGIVLLMRSLQRGRQGKT*
Ga0070707_1022740681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VAALIFMIGFVIFGTIFRISDTDYGWFGKAALPALLIVIGLVLLARSVQRSRQA*
Ga0070698_1007497172	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GFVIFGTIFRISDTDYGWFGKAALPALLIVIGIVLLARSVQRSRQA*
Ga0070698_1011264061	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AALIFMIGFVIFGTIFRISDTDYGWFGKAALPALLIVIGIILLARSVQRSRQA*
Ga0070698_1014298141	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLMFVALLIFMIAFVIFGTIFRISETDYGLFGKAALPGLLIVIGILLLARSIQRSRAG*
Ga0070698_1017212911	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LIFMIGFVLFESILNISGIDYGIFGRAALPVLLIVIGVTLLARSFQRGRSV*
Ga0070698_1021883471	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AALIFMIGFVIFGTIFRISDTDYGWFGKAALPALLIVIGLVLLARSVQRSRQA*
Ga0070699_1003074341	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GFVLFESILGISGRDYFGPVGKAALPVLLILVGVILLVRSIQRSRQT*
Ga0070699_1006410101	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LIFMIAFVIFGTIFRISETDYGLFGKAALPGLLIVIGILLLARSIQRSRAG*
Ga0070735_108382092	3300005534	Surface Soil	IGLMIFLIGFVLFESILGISGRDYFGPLGKAALPALLIIVGLILLVRSIQASRRQA*
Ga0070697_1000711154	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NLMFIGALIFMILFVLFETILHISGIDYGWFGKAALPALLIVIGIVLLMRSLQRGRQGKT
Ga0070697_1005781102	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IGFVLFESILGISGRDAFGPVGKAALPVLLILVGVILLVRSIQRSRKT*
Ga0070697_1007991751	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FVLFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRRA*
Ga0070704_1001500871	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	IAFVIFGTIFRISETDYGLFGKAALPGLLIVIGILLLARSIQRSRAG*
Ga0070704_1003782472	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	IGAMIFLIGFVLFESILGISGRDYFGPVGKGALPALLIIVGVILLVRSIQRSRQA*
Ga0066692_102228572	3300005555	Soil	GRDYFGPVGKAALPVLLILVGIILLVRSVQRSRRT*
Ga0066693_100373593	3300005566	Soil	GFMIFLIGFVLFESILGISGRDAFGPFGKAALPLLLILVGVILLVRSVQRSRQA*
Ga0066703_100028761	3300005568	Soil	VVFESILGISGRDYFGPVGKGALPGLLIIVGIILLVRSVQRSRQT*
Ga0066694_100677033	3300005574	Soil	RTLLFVSLMIFLIGFVLFESILGISGRDAFGPVGKAALPSLLIIVGVILVVRSVQRSRRA
Ga0066708_102859351	3300005576	Soil	ISGRDYFGPVGKAALPVLLIVVGVILLVRSIQRSRRT*
Ga0075023_1002903241	3300006041	Watersheds	GRVLMFVAAIIFMIGFVIFATIFRISDTDYGWFGKAALPALLIVVGLVLLGRSIQRTRSA
Ga0075028_1004252832	3300006050	Watersheds	AFLIFMIGFVFFESILHLTGTDYGLFGKVALPGLLVIIGVALLVRSLQRSRSA*
Ga0097691_10150571	3300006055	Arctic Peat Soil	SVMLRRGRALMFIGALIFMIGFVLFESILGISGVDYGVFGKAALPALLIVIGIILLVRSIQRSRRAT*
Ga0066653_102200482	3300006791	Soil	ILGISGRDAFGPFGKAALPLLLILVGVILLVRSVQRSRGS*
Ga0075425_1001138264	3300006854	Populus Rhizosphere	TGRTLLFIGLMIFLIGFVLFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRQS*
Ga0075425_1006388502	3300006854	Populus Rhizosphere	LLFVGIMIFLIGFVLFESILGISGRDAFGPLGKAALPLLLILVGVILLVRSMQRDRQA*
Ga0075425_1027185702	3300006854	Populus Rhizosphere	ESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRQS*
Ga0075424_1007605362	3300006904	Populus Rhizosphere	LFIGLMIFLIGFVLFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRQS*
Ga0075424_1028329982	3300006904	Populus Rhizosphere	ESILGISGRDYFGPIGKAALPVLLIVVGAILLVRSIQRSRQTP*
Ga0075436_1007852172	3300006914	Populus Rhizosphere	ILGISGRDTFGPVGKGALPALLIIVGVILFVRSVQRSRA*
Ga0075435_1002773483	3300007076	Populus Rhizosphere	GISGRDAFGPLGKAALPLLLILVGVILLVRSMQRSRQS*
Ga0075435_1006101352	3300007076	Populus Rhizosphere	IGFVLFESILGISGRDAFGPLGKAALPLLLILVGVILLVRSMQRSRQA*
Ga0099791_101041942	3300007255	Vadose Zone Soil	MIGFVFFESILGISGVDYGIFGKAALPALLIVIGVILLVRSIQRSRRLT*
Ga0099793_106961101	3300007258	Vadose Zone Soil	MFVGLLIFMIGFVLFESILGISDMDYGVFGKAALPGLLVVIGIILLVRSVQRSRRAKI*
Ga0099794_103195192	3300007265	Vadose Zone Soil	RRGRTLMFVALLIFMIGFVLFESILGISGQDYGVFGKAALPALLIVIGLILLVRSIQRSRAKA*
Ga0099795_101864562	3300007788	Vadose Zone Soil	FVGALIFMIGFVLFESILGISDMDYGVFGKAALPGLLVVIGIILLVRSIQRSRRPNI*
Ga0066710_1006097233	3300009012	Grasslands Soil	LFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRQK
Ga0099830_112176842	3300009088	Vadose Zone Soil	DLVALRRGRTLMFVGLLIFMIGFVLFESILGISDMDYGVFGKAALPGLLVVIGIILLVRSIQRSRRA*
Ga0099830_113554941	3300009088	Vadose Zone Soil	RTLLFISAMIFIIGFVLFESILGISGRDYGGFGKAALPLLLIVIGIILLVRSAQRSRRA*
Ga0099828_112553731	3300009089	Vadose Zone Soil	RVLMFVALLIFMIAFVIFGTIFRISETDYGLFGKAALPGLLIVIGIVLLARSIQRSRTS*
Ga0099827_109764051	3300009090	Vadose Zone Soil	TGRTLLFVALIIFLIGFVLFESILGISGRDAFGPVSKAALPVLLILVGVILLVRSIQRSRQSSSP*
Ga0134109_101177522	3300010320	Grasslands Soil	ESILGISGRDAFGPLGKAALPLLLILVGVILLVRSVQRSRSS*
Ga0134067_104333802	3300010321	Grasslands Soil	VAALIFMIGFVIFGTIFKISEVDYGWFGRAALPTLLIVVGIVLLVRSIQRSRSA*
Ga0134080_101826191	3300010333	Grasslands Soil	TLLFVGIMIFLIGFVLFESILGISGRDAFGPLGKAALPLLLILVGVILLVRSMQRSRQA*
Ga0134071_100960323	3300010336	Grasslands Soil	GISGRDAFGPLGKAALPLLLILVGVILLVRSMQRSRQA*
Ga0134071_103442331	3300010336	Grasslands Soil	TGRTLLFVGIMIFLIGFVLFESILGISGRDAFGPLGKAALPLLLILVGVILLVRSMQRSRQS*
Ga0126372_103513712	3300010360	Tropical Forest Soil	IFIVGFVLFESILGISGRDYFGNVGKGALPALLIIVGAILLVRSIQASRRT*
Ga0126379_109793351	3300010366	Tropical Forest Soil	GISGRDYFGNVGKGALPALLIIVGAILLVRSIQASRRT*
Ga0137392_107497281	3300011269	Vadose Zone Soil	IFGTIFRISEQDYGWFGKAALPGLLILIGIVLLARSIQRSRQT*
Ga0137392_110334602	3300011269	Vadose Zone Soil	FESILGISGVDYGIFGKAALPALLIVIGVILLVRSIQRSRRLT*
Ga0137392_112095092	3300011269	Vadose Zone Soil	MIGFVIFATIFRISDMDYGWFGKAALPALLIVVGFVLLARSIQSSRQA*
Ga0137391_113949101	3300011270	Vadose Zone Soil	IFMIGFVLFESILGISGQDYGIFGKAALPGLLIVIGIILLVRSIQRTRQT*
Ga0120153_10869071	3300011991	Permafrost	VLFESILGISGPDSYGIFGKAALPALLILIGIILLVRSIQRSRRPI*
Ga0120159_10577692	3300012014	Permafrost	IFMIGFVIFATIFRISDMDYGWFGKAALPVLLIVVGLVLLARSIQRRRSA*
Ga0137389_112879711	3300012096	Vadose Zone Soil	MFVALLIFMIAFVIFGTIFRISDTDYGLFGKAALPGLLIVIGIVLLVRSIQRSRTT*
Ga0137364_109710302	3300012198	Vadose Zone Soil	RDYFGPVGKAALPVLLILVGVILLVRSIQRSRKT*
Ga0137382_113047532	3300012200	Vadose Zone Soil	LLFIGLMIFLIGFVLFESILGISGRDYFGPIGKAALPVLLIVVGVVLLVRSIQRSRQN*
Ga0137399_110766351	3300012203	Vadose Zone Soil	IFMIGFVLFESILGISDMDYGVFGKAALPGLLVVIGIILLVRSVQRSRRAKI*
Ga0137399_112745822	3300012203	Vadose Zone Soil	IFMIGFVLFESILGISDMDYGVFGKAALPGLLVVIGIILLVRSVQRSRRANI*
Ga0137380_110510481	3300012206	Vadose Zone Soil	LIFMIGFVLFESILGISDMDYGIFGKAALPGLLVVIGIILLVRSIQRSRRAA*
Ga0137380_111392651	3300012206	Vadose Zone Soil	QGRILMFVALLIFMIAFVIFGTIFRISDTDYGLFGKAALPGLLIVIGIVLLVRSIQGSRAS*
Ga0137376_104469592	3300012208	Vadose Zone Soil	LRTARTLLAIAVMIFLVGFVLFESILGISGRDYFGPGGKAALPVLLILVGVILLVRSIQRSRKT*
Ga0137379_100927901	3300012209	Vadose Zone Soil	IFMVGFVIFGTIFKISDVDYGWFGKAALPGLLIVVGILLLVRSIQRSRSA*
Ga0137378_100742511	3300012210	Vadose Zone Soil	MILFVLFETILHISGIDYGWFGKAALPALLIVIGVVLLARSLQRSRQAR*
Ga0137387_100035649	3300012349	Vadose Zone Soil	VLMFVAFLIFMVGFVIFGTIFKISDVDYGWFGKAALPGLLIVVGILLLVRSIQRSRSA*
Ga0137386_106128871	3300012351	Vadose Zone Soil	LKQGRTLMFIAAMIFMIGFVIFEPILNISGIDYGWFGKAALPALLIVIGAILLMRSIQRSRQA*
Ga0137385_111589472	3300012359	Vadose Zone Soil	LRTGRTLLFIGLMIFLIGFVLFESILGISGRDYFGPIGKAALPVLLILVGVILLVRSIQRSRRT*
Ga0137361_102548463	3300012362	Vadose Zone Soil	LFESILGISGRDAFGPVSKAALPVLLILVGVILLVRSIQRSRQSSSP*
Ga0137390_106836602	3300012363	Vadose Zone Soil	RTLIFIAAIIFMIGFVLFESILGISGQDYGIFGKAALPGLLIVIGIILLVRSIQRTRQT*
Ga0137358_108728292	3300012582	Vadose Zone Soil	LIFMIGFVIFGTIFKISEVDYGWFGKAALPVLLIVVGIVLLVRSIQRSRSA*
Ga0137396_111330281	3300012918	Vadose Zone Soil	VAAIIFMIAFVIFGTVLNIGGYNYGWFGKAALPALLIVVGLVLLARSIQRTRQA*
Ga0137396_112593981	3300012918	Vadose Zone Soil	IFMIGFVIFGTIFKISEVDYGWFGKAALPALLIVVGIVLLARSIQRSRSA*
Ga0137404_115776852	3300012929	Vadose Zone Soil	LIFMIGFVFFESILGISGLDYGIFGKAALPALLIVIGIILLVRSIQRSRRAT*
Ga0120154_10574903	3300013501	Permafrost	IFMIGFVFFESILGISATDYGIFGKAALPALLIVIGAILLVRSIQRSRRAT*
Ga0182035_110626562	3300016341	Soil	FESILGISGDRYGVVGRGALPALLIVIGVILLVRSVQRNRAQT
Ga0187823_100069384	3300017993	Freshwater Sediment	YWGVLIFLIGFVFFESVLNVSGHDYGKVGQAALPVLLIVIGVTLLVRNFQRRTKS
Ga0187823_103795711	3300017993	Freshwater Sediment	WAVLIFLIGFVFFESVLNVSGHDYGKVGQAALPLLLIIIGVTLLVRNFQRQAKS
Ga0184618_100039911	3300018071	Groundwater Sediment	GRTLLFVGALIFMIGFVLFESILGISDMDYGIFGKAALPGLLVVIGIILLVRSIQRSRQAKA
Ga0066662_111288982	3300018468	Grasslands Soil	LIFIGLMIFLIGFVLFESILGISGRDYFGPVGKAALPALLILVGVILLVRSVQRGRKT
Ga0066662_115020371	3300018468	Grasslands Soil	LMIFLIGFVLFESILGISGRDYFGPVGKAALPALLILVGVILLVRSVQRGRKT
Ga0066669_102885723	3300018482	Grasslands Soil	TLLFIGLMIFLIGFVLFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRQH
Ga0193731_11569541	3300020001	Soil	FMIGFVLFESILGISDMDYGIFGKAALPGLLVVIGIILLVRSIQRSRQAKA
Ga0193733_11510222	3300020022	Soil	SGRTLLFVGVMIFLIGFVLFESILGISGRDYFGPVGKAALPLLLILVGVILLVRSLQRSRATKS
Ga0210404_102886441	3300021088	Soil	TLLFVGLMIFLIGFVLFESILGISGRDTFGPVGKAALPLLLIIVGVILFVRSWQQSRRV
Ga0210394_110208981	3300021420	Soil	AMIFMIGFVLFESILGISGMDYGIFGKAALPALLIVIGIILLVRSIQRSRAAR
Ga0247670_11082971	3300024283	Soil	LIGFVFFESILGISGMDYGIFGKAALPGLLIVIGIVLLVRSLQRSRSA
Ga0207653_103853601	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	IIVMIGFVIFATIFRISDMDYGWFGKAALPALLIVVGLVLLARSIQRGRAA
Ga0207684_111725111	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	IAFVIFGTIFRISETDYGLFGKAALPGLLIVIGIVLLARSIQRSRTS
Ga0207646_117135931	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VAALIFMIGFVIFGTIFRISDTDYGWFGKAALPALLIVIGLVLLARSVQRSRQA
Ga0207664_107169853	3300025929	Agricultural Soil	SGRDAFGLVSKGALPALLILVGAILLFRNMRSRQA
Ga0207702_108115381	3300026078	Corn Rhizosphere	SGRDYFGPLGKAALPVLLIVVGAILLVRSIQRSRAS
Ga0209350_11041361	3300026277	Grasslands Soil	IAVMIFLVGFVLFESILGISGRDYFGPVGKAALPVLLILVGVILLVRSIQRSRQT
Ga0209268_11229151	3300026314	Soil	IFLIGFVLFESILGISGRDAFGPFGKAALPLLLILVGVILLVRSVQRSRGS
Ga0209155_10531871	3300026316	Soil	IGFVLFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRQH
Ga0209155_11645051	3300026316	Soil	GRTLLFVSLMIFLIGFVLFESILGISGRDAFGPVGKAALPSLLIIVGVILVVRSVQRSRR
Ga0209471_11283961	3300026318	Soil	ESILGVSGRDYFGPVGKGALPGLLIIVGIILLVRSVQRSRQT
Ga0209802_11897322	3300026328	Soil	SGRDYFGPVGKAALPALLIIVGVILLVRSVQRSRRT
Ga0209158_12212562	3300026333	Soil	FESILGISGRDYFGPVGKAALPVLLILVGIILLVRSVQRSRRT
Ga0257168_10588102	3300026514	Soil	IFMIAFVIFGTIFRISDTDYGLFGKAALPGLLIVIGIVLLVRSIQRSRAS
Ga0209808_11233622	3300026523	Soil	FVLFESILGISGRDYFGPVGKAALPALLILVGVILLVRSVQRGRKT
Ga0209690_11337522	3300026524	Soil	FVLFESILGISGRDYFGPVGKAALPALLIIVGVILLVRSVQRSRRT
Ga0209474_101726703	3300026550	Soil	MQALRSGRTLLFVSLMIFLIGFVLFESILGISGRDAFGPVGKAALPSLLIIVGVILVVRSVQRSRRA
Ga0208988_11189432	3300027633	Forest Soil	PERLRRGRTLMFVAALIFMIGFVLFESILGISGTDYGVFGKAALPALLIVIGLILLVRSVQRSRSRA
Ga0209011_10365471	3300027678	Forest Soil	QGRSLIVIAFLIFMIGFVFFESILHMTGTDYGLFGKVALPGLLVVIGVALLVRSVQRTRR
Ga0209011_11356491	3300027678	Forest Soil	MIGFVLFESILGISDMDYGVFGKAALPGLLVVIGIILLVRSVQRTRKAS
Ga0208989_101769022	3300027738	Forest Soil	SLMFIAVLIFMIGFVLFESILGISGRDYGFFGKAALPILLIVIGIILLWRQRARRA
Ga0209580_103465811	3300027842	Surface Soil	IALMIFAIGFVLFESILGISGRDYGVVGKAALPALLIVIGIILLVRSVQRARRA
Ga0209701_105756891	3300027862	Vadose Zone Soil	FVALLIFMIAFVIFGTIFRISETDYGLFGKAALPGLLIVIGIVLLFRSIQRSRTS
Ga0209283_100169516	3300027875	Vadose Zone Soil	ISAMIFIIGFVLFESILGISGRDYGGFGKAALPLLLIVIGIILLVRSAQRSRRA
Ga0209283_106767941	3300027875	Vadose Zone Soil	VLMFVALLIFMIAFVIFGTIFRISDTDYGLFGKAALPGLLIVIGIVLLVRSIQRSRTT
Ga0209526_102108041	3300028047	Forest Soil	IGFVFFESILGISGQDYGIFGKAALPFLLIVIGIILLVRSIQRSRRAT
Ga0307469_111788571	3300031720	Hardwood Forest Soil	IGFVLFESILGISGRDAFGPVGKAALPVLLILVGVILLVRSIQRSRKT
Ga0307469_117510692	3300031720	Hardwood Forest Soil	IGLMIFLIGFVLFESILGISGRDYFGPIGKAALPVLLIVVGVILLVRSIQRSRST
Ga0307479_108264101	3300031962	Hardwood Forest Soil	LMFIAVILFMIGFVFFESILGISGMDYGIFGKAALPGLLIVIGLILLVRSIQRSRRGV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073370

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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