Metagenome / Metatranscriptome Family F073365

Basic Information
Family ID	F073365
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	42 residues
Representative Sequence	CSRGVTLVELDGVAAADKIVTLRDDGLPHEVRVVLGTKPPA
Number of Associated Samples	105
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (92.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.167 % of family members)
Environment Ontology (ENVO)	Unclassified (30.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05532	CsbD	37.50
PF01904	DUF72	4.17
PF03358	FMN_red	4.17
PF02806	Alpha-amylase_C	3.33
PF01975	SurE	2.50
PF07043	DUF1328	2.50
PF01168	Ala_racemase_N	1.67
PF00583	Acetyltransf_1	1.67
PF11838	ERAP1_C	1.67
PF00487	FA_desaturase	0.83
PF12838	Fer4_7	0.83
PF00069	Pkinase	0.83
PF13450	NAD_binding_8	0.83
PF11964	SpoIIAA-like	0.83
PF03631	Virul_fac_BrkB	0.83
PF02811	PHP	0.83
PF14235	DUF4337	0.83
PF00175	NAD_binding_1	0.83
PF00534	Glycos_transf_1	0.83
PF00196	GerE	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	37.50
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	4.17
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	3.33
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	3.33
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.33
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	3.33
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	2.50
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	2.50
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.83
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.83
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	39.17 %
Unclassified	root	N/A	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.67 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	38.33 %
Unclassified	root	N/A	7.50 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	9.17 %
Unclassified	root	N/A	7.50 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	6.67 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	5.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	9.17 %
Unclassified	root	N/A	7.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5.83 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.83 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	5.83 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	3.33 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.67 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Herminiimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herminiimonas	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3.33 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.67 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.67 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.83 %
Herminiimonas arsenicoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herminiimonas → Herminiimonas arsenicoxydans	0.83 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	3.33 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.67 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.67 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.83 %
Herminiimonas arsenicoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herminiimonas → Herminiimonas arsenicoxydans	0.83 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10067802	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300000955\|JGI1027J12803_108716954	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300001333\|A21PFW6_1216448	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300004643\|Ga0062591_100439962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1095	Open in IMG/M
3300005186\|Ga0066676_10665991	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005186\|Ga0066676_11097935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300005289\|Ga0065704_10618955	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005295\|Ga0065707_10032982	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300005327\|Ga0070658_10070662	All Organisms → cellular organisms → Bacteria	2858	Open in IMG/M
3300005446\|Ga0066686_10271728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1148	Open in IMG/M
3300005450\|Ga0066682_10404834	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005456\|Ga0070678_102018108	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005544\|Ga0070686_101519805	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005545\|Ga0070695_100209313	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300005552\|Ga0066701_10253316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1089	Open in IMG/M
3300005553\|Ga0066695_10254480	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300005558\|Ga0066698_10921937	Not Available	558	Open in IMG/M
3300005559\|Ga0066700_10823853	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300005568\|Ga0066703_10707983	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300005569\|Ga0066705_10725854	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005574\|Ga0066694_10461635	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005586\|Ga0066691_10576966	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300005616\|Ga0068852_102542981	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300006791\|Ga0066653_10443854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300006797\|Ga0066659_10548075	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300006797\|Ga0066659_10960644	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300007255\|Ga0099791_10523868	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300009012\|Ga0066710_101244228	Not Available	1154	Open in IMG/M
3300009100\|Ga0075418_11776588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	671	Open in IMG/M
3300009101\|Ga0105247_11804411	Not Available	509	Open in IMG/M
3300009177\|Ga0105248_10319691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1748	Open in IMG/M
3300010303\|Ga0134082_10030767	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300010303\|Ga0134082_10226391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	770	Open in IMG/M
3300010322\|Ga0134084_10034246	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300010333\|Ga0134080_10322179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300010360\|Ga0126372_13057038	Not Available	519	Open in IMG/M
3300010364\|Ga0134066_10422741	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010364\|Ga0134066_10444714	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	505	Open in IMG/M
3300010399\|Ga0134127_13329352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	526	Open in IMG/M
3300012149\|Ga0153941_1087674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herminiimonas → Herminiimonas arsenicoxydans	505	Open in IMG/M
3300012180\|Ga0153974_1058751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	848	Open in IMG/M
3300012198\|Ga0137364_10523635	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300012202\|Ga0137363_11495453	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300012205\|Ga0137362_10746522	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300012205\|Ga0137362_11526649	Not Available	555	Open in IMG/M
3300012205\|Ga0137362_11722594	Not Available	514	Open in IMG/M
3300012210\|Ga0137378_10471155	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300012212\|Ga0150985_119439896	Not Available	557	Open in IMG/M
3300012351\|Ga0137386_10070055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2446	Open in IMG/M
3300012351\|Ga0137386_10427044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	954	Open in IMG/M
3300012356\|Ga0137371_10252675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1376	Open in IMG/M
3300012915\|Ga0157302_10056743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1125	Open in IMG/M
3300012960\|Ga0164301_11194493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	611	Open in IMG/M
3300012972\|Ga0134077_10296882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	678	Open in IMG/M
3300012976\|Ga0134076_10508620	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012977\|Ga0134087_10757676	Not Available	521	Open in IMG/M
3300013296\|Ga0157374_11923925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	617	Open in IMG/M
3300013297\|Ga0157378_10447361	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300013306\|Ga0163162_11544461	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300013306\|Ga0163162_11717552	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300014166\|Ga0134079_10110570	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300015356\|Ga0134073_10091378	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300015372\|Ga0132256_102503713	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	618	Open in IMG/M
3300016319\|Ga0182033_10045501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2931	Open in IMG/M
3300016319\|Ga0182033_10198178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1595	Open in IMG/M
3300016341\|Ga0182035_11578003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	592	Open in IMG/M
3300016357\|Ga0182032_10896803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	753	Open in IMG/M
3300016387\|Ga0182040_10610095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	884	Open in IMG/M
3300018054\|Ga0184621_10178716	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300018054\|Ga0184621_10201642	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300018066\|Ga0184617_1223484	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300018073\|Ga0184624_10357779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	653	Open in IMG/M
3300018081\|Ga0184625_10310125	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300018431\|Ga0066655_10616057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	732	Open in IMG/M
3300018468\|Ga0066662_10061952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2453	Open in IMG/M
3300018468\|Ga0066662_12187403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300019868\|Ga0193720_1044821	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300019878\|Ga0193715_1014453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1704	Open in IMG/M
3300019885\|Ga0193747_1035668	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300019997\|Ga0193711_1033731	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300019999\|Ga0193718_1103698	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300020006\|Ga0193735_1134729	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300020018\|Ga0193721_1004254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3728	Open in IMG/M
3300022756\|Ga0222622_10012935	All Organisms → cellular organisms → Bacteria	4030	Open in IMG/M
3300023058\|Ga0193714_1007526	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300025898\|Ga0207692_11116143	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300025903\|Ga0207680_10239483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1250	Open in IMG/M
3300025923\|Ga0207681_10552740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	948	Open in IMG/M
3300025932\|Ga0207690_10403494	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300025936\|Ga0207670_10599437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	904	Open in IMG/M
3300026067\|Ga0207678_10821057	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300026305\|Ga0209688_1095352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300026324\|Ga0209470_1022039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3415	Open in IMG/M
3300026325\|Ga0209152_10114511	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300026360\|Ga0257173_1065802	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300026537\|Ga0209157_1223619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	772	Open in IMG/M
3300026537\|Ga0209157_1381861	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300026547\|Ga0209156_10422939	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300026550\|Ga0209474_10747916	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300026557\|Ga0179587_10637373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	702	Open in IMG/M
3300026867\|Ga0207475_1015202	Not Available	515	Open in IMG/M
3300028380\|Ga0268265_10446552	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1207	Open in IMG/M
3300028708\|Ga0307295_10103276	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300028793\|Ga0307299_10320013	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300028824\|Ga0307310_10441810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	650	Open in IMG/M
3300028878\|Ga0307278_10086963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1407	Open in IMG/M
3300030916\|Ga0075386_12060206	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031231\|Ga0170824_100496877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300031231\|Ga0170824_128320909	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031446\|Ga0170820_10021388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300031446\|Ga0170820_15767548	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300031474\|Ga0170818_104632585	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031716\|Ga0310813_10863214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	818	Open in IMG/M
3300031833\|Ga0310917_10405567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	927	Open in IMG/M
3300031833\|Ga0310917_11050225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	545	Open in IMG/M
3300031910\|Ga0306923_11608176	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300032012\|Ga0310902_10480274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	807	Open in IMG/M
3300032059\|Ga0318533_10574120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	827	Open in IMG/M
3300032205\|Ga0307472_102507671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	524	Open in IMG/M
3300032421\|Ga0310812_10034032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1885	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.33%
Plants	Host-Associated → Plants	15.00%
Aquatic	Environmental → Aquatic	5.00%
Fungi	Host-Associated → Fungi	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.83%
Sediment	Environmental → Aquatic → Sediment	5.00%
Mycelium	Host-Associated → Fungi → Mycelium	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Loam	Environmental → Terrestrial → Soil → Loam	3.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012149	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ025 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026867	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-12 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073365

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100678021	3300000793	Forest Soil	LVELDGVAAADKIVTLHDDALSHQVRVVLGTKSPA*
JGI1027J12803_1087169541	3300000955	Soil	NPEHCSRGVTLVELDGVAAADKIVMLRNDALPHDVRVVLGTKPPT*
A21PFW6_12164483	3300001333	Permafrost	PDHCSRGVTLVELDGVAAADKIVTLRDDALPHEVRVLLGTKQPA*
Ga0062591_1004399621	3300004643	Soil	RGVVVTELDGVSAANNIVNLRDDGVSHEVRVVLGNKPPA*
Ga0066676_106659911	3300005186	Soil	PDHCSRGVTLVELDGIAVADKIVTLRDDTQPHEVRVVLGTKPSS*
Ga0066676_110979351	3300005186	Soil	HCARGVTLVELDGAAAADKIVMLRNDALPHEVRVVLGPKPPT*
Ga0065704_106189553	3300005289	Switchgrass Rhizosphere	VENPDHCSRGVILMELDGVSAADKTVRLCDDGLPHEVRVVLGNKPV*
Ga0065707_100329824	3300005295	Switchgrass Rhizosphere	NPDHCSHGVILMELDGVSLADKTVKLCDDGLPHEVRAVLGNKPPV*
Ga0070658_100706621	3300005327	Corn Rhizosphere	DQCSRGVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA*
Ga0066686_102717281	3300005446	Soil	NPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRVVLGTKTPA*
Ga0066682_104048341	3300005450	Soil	ENPERCSRGVTLVELDGVVAADKIVRLRNDELPHEVRVVLGSKPPT*
Ga0070678_1020181082	3300005456	Miscanthus Rhizosphere	DHCCRGVVVTELDGVSAANNIVNLRDDGVSHEVRVVLGNKPPA*
Ga0070686_1015198051	3300005544	Switchgrass Rhizosphere	RGVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA*
Ga0070695_1002093134	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ENPDHCSRGVIVMELDGVTVAGKAVKLSDDGLPHEVRVVLGNKPPA*
Ga0066701_102533161	3300005552	Soil	TLVELDGAAVADKIVMLRNDALPHEVRVVLGPKPPT*
Ga0066695_102544801	3300005553	Soil	CSRGVVLVEVDGIAVPDKIVTLRDDALGHEVRVVLGTKTAA*
Ga0066698_109219371	3300005558	Soil	LVELDGVVAADKIVTLRNDMLSHEVRVVLGTEPPA*
Ga0066700_108238532	3300005559	Soil	FQNTIYHIAVENADHCSRGVTLVELDGVGVADKIMTLRDDALPHEVRVVLGTKPPA*
Ga0066703_107079831	3300005568	Soil	CSRGVTLVELDGVAAADKIVTLRDDGLPHEVRVVLGTKPPA*
Ga0066705_107258541	3300005569	Soil	VELDGVAVADKIVTLRDDTLPHEVRVVLGIKPPA*
Ga0066694_104616351	3300005574	Soil	VENPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRVVLGTKTLA*
Ga0066691_105769662	3300005586	Soil	CSRGVVLVEVDGIAVPDKIVTLRDDALRHEVRVVVGTKTSA*
Ga0068852_1025429811	3300005616	Corn Rhizosphere	LCSRGVIVMELDGVTVAGKAVKLSDDGLPHEVRVVLGNKPPA*
Ga0066653_104438543	3300006791	Soil	VLVEVDGIAVPDKIVTLRDDALGHEVRVVLGTKTPA*
Ga0066659_105480753	3300006797	Soil	HCSRGVVLVEVDGIAVPDKIVTLRDDALRHEVRVVLGTKTSA*
Ga0066659_109606443	3300006797	Soil	RGVILMELDRVSAADKTVRLCDDGLLHEVRVVLGNKPPVSG*
Ga0099791_105238681	3300007255	Vadose Zone Soil	LMELDGVSAADKTVRLCDDGLPHEVRVVLGNKPM*
Ga0066710_1012442283	3300009012	Grasslands Soil	AVENPVPCSSGVTLVEVDGIMVHAKIVTLRDDGLRHEKRVVLGT
Ga0075418_117765883	3300009100	Populus Rhizosphere	VILVELDGVSVADKTVKLYDDGLPHEVRVVLGNKPST*
Ga0105247_118044111	3300009101	Switchgrass Rhizosphere	NPDQCSRGAAEPEIDEVSAANNIVNLCDDGVSHEVRVVLGNKPPG*
Ga0105248_103196911	3300009177	Switchgrass Rhizosphere	TELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA*
Ga0134082_100307671	3300010303	Grasslands Soil	DHCSRGVALVEVDGIAVSDKIVTLRDDARPHEVRVVLGTEPVA*
Ga0134082_102263913	3300010303	Grasslands Soil	GVTLVEVDGIMVADKIVTLRDDGLRHEVRVVLGT*
Ga0134084_100342461	3300010322	Grasslands Soil	EHCSRGVTLVELDGVAAADKIVTLRDDALPHEVRVVLGIEPSE*
Ga0134080_103221791	3300010333	Grasslands Soil	IAVENPDHCSRGVTLVELDGIAVADKIVVLRDDALPHEVRVVLGTKPSA*
Ga0126372_130570381	3300010360	Tropical Forest Soil	PDHCSRGVILVELDGVSVADKTVRLRDDGLSHEVRVVLGNKPPV*
Ga0134066_104227411	3300010364	Grasslands Soil	YRIVVENPYHCSRGVTLGKLDGVAARDKIVRLRDDALPHDVRVVLGTKPPT*
Ga0134066_104447142	3300010364	Grasslands Soil	ILVELDGVSTAEKTVGLCDDGLSHEVRVVLGNKPPVSG*
Ga0134127_133293522	3300010399	Terrestrial Soil	ILVELDGVSVADKIVKLRDDGQAHEVRVVMGNKPST*
Ga0153941_10876741	3300012149	Attine Ant Fungus Gardens	IAVENPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRVVLGTKTPA*
Ga0153974_10587512	3300012180	Attine Ant Fungus Gardens	AVENPEHCSRGVTLVEVDGVAAADKIGILRNDALPHDVRVVLGAKPT*
Ga0137364_105236352	3300012198	Vadose Zone Soil	LVELDGVAAADKIVTLRDDALPHEVRVVLGIEPSE*
Ga0137363_114954531	3300012202	Vadose Zone Soil	ENPRHCSCGVTLLEVDGITVAEKMVTLRDDALPHEVRVVMGRESPDD*
Ga0137362_107465221	3300012205	Vadose Zone Soil	IYRIAVENPDHCSRGVTLVELDAGVAADKIVTLRDDALAHEVRVVLGTKPPA*
Ga0137362_115266491	3300012205	Vadose Zone Soil	NTTYRIAVENPDHCSQGVILMELDGISAADKIVRLCDDGLPHKVRVVLGNKPPV*
Ga0137362_117225941	3300012205	Vadose Zone Soil	ENPDHCSHGVVLLEVDGIAVPDKIVTLRDDALDHEVRAVLGTKTPA*
Ga0137378_104711551	3300012210	Vadose Zone Soil	RSQGVALVELDGVAVADKIVTLRDDTLPHEVRVVLGIKPPA*
Ga0150985_1194398962	3300012212	Avena Fatua Rhizosphere	GVVVTEVDGVSVANHIVKLCDDGVSHEVRVVLGNKPPA*
Ga0137386_100700551	3300012351	Vadose Zone Soil	RGVTLVELDGAAAADKIVMLRNDALPHEVRVVLGPKPPT*
Ga0137386_104270441	3300012351	Vadose Zone Soil	DHCSRGVTLVELDGIAVADKIVTLRDDALPHEVRVVLGTKPST*
Ga0137371_102526751	3300012356	Vadose Zone Soil	PLPCSSGVTLVEVDGIMVADKIVTLRDDGLRHEVRVVLGT*
Ga0157302_100567434	3300012915	Soil	VVVTELDEVSTANNTVKLCDDGMPHEVRVVLGNKPPA*
Ga0164301_111944932	3300012960	Soil	VLMELDGVAVADKIVTLRDDALPHEVRVVLGTKPST*
Ga0134077_102968821	3300012972	Grasslands Soil	VENPDHCSRGVALVEVDGIAVADKMVTLRDDARPHEVRVVLGTEPVV*
Ga0134076_105086202	3300012976	Grasslands Soil	LMELDGVSAADKTVKLCDGGLPHEVRVVLGNKPPV*
Ga0134087_107576761	3300012977	Grasslands Soil	IAVENPDQCSQGVILMELDGVSVADKIVRLCDDGLPHKVRVVLGNKPSL*
Ga0157374_119239251	3300013296	Miscanthus Rhizosphere	TELDGVSTANNTVKLCDDGMPHEVRVVLGNKPPA*
Ga0157378_104473611	3300013297	Miscanthus Rhizosphere	RGVIVMELDGVTVAGKAVKLSDDGLPHEVRVVLGNKPPA*
Ga0163162_115444612	3300013306	Switchgrass Rhizosphere	TVENPDRCSRGVVLVELDGVATVDKTVTLRNDALPHEVRVVLGIKPPDLDG*
Ga0163162_117175521	3300013306	Switchgrass Rhizosphere	RFAVENPDCCSRGVILVELDGVSVADKIVKLRDDGQTHEVRVVMGNKPST*
Ga0134079_101105702	3300014166	Grasslands Soil	IYHIGVENPDHCSRGVALVELDGAAVADKIVTLHDDAQPHGVRVVLGANPSA*
Ga0134073_100913783	3300015356	Grasslands Soil	VELDGVAAADKIVTLRDDALSHEVRVVLGTKPSTRGF*
Ga0132256_1025037132	3300015372	Arabidopsis Rhizosphere	VILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPV*
Ga0182033_100455011	3300016319	Soil	ENPDNCSRGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0182033_101981781	3300016319	Soil	PDHCSRGVTLVELDGVSVTDKVVKLRNDGLTHQVRVVLGRKLPS
Ga0182035_115780031	3300016341	Soil	CSRGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0182032_108968031	3300016357	Soil	GVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0182040_106100951	3300016387	Soil	VENPDNCSRGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0184621_101787162	3300018054	Groundwater Sediment	QNTLYRIAVENPGHCSSGVTLVEVDGIAVADKMVTLRDDSLPHEVRVVLGTESLA
Ga0184621_102016421	3300018054	Groundwater Sediment	PDHSSRGVTLVELDGVAAADKIVILRDDALPHEVRVVLGTKPPE
Ga0184617_12234841	3300018066	Groundwater Sediment	RGVIVMELDGVPAADKTVRLRDDGLPHEVRVVLGNKTPV
Ga0184624_103577793	3300018073	Groundwater Sediment	VILMESDGVSAADKPVKLCDDGLPHEVRVVLGNKPPM
Ga0184625_103101251	3300018081	Groundwater Sediment	CSLVVIVMKLDGVSAADKTVKLCDDGLPHEVRVVLGNKPPV
Ga0066655_106160572	3300018431	Grasslands Soil	CSRGVVVVELDGVAAADKIVTLRDDALSHEVRVVLGTKPST
Ga0066662_100619521	3300018468	Grasslands Soil	DHCSRGVTLVELDGVAAADKIVTLRDDALPHEVRVVLGTKSPP
Ga0066662_121874031	3300018468	Grasslands Soil	PCSRGVTLVELDGVASADKVITLRDDALPHEMRVVLGIEPPKK
Ga0193720_10448211	3300019868	Soil	TLVELDGIVAAGKIVTLRNDMLSHEVRVVLGTKPPT
Ga0193715_10144531	3300019878	Soil	NPDHCSRGVIVMELDGVSAADKTVKLFDDGLPHEVRVVLGNKPV
Ga0193747_10356683	3300019885	Soil	PDHCSRGVTLVELDGIAVADKIVTLRDDALLHEVRVVLGTKPPA
Ga0193711_10337311	3300019997	Soil	DHCSGGVILMELDGVSAAEKTVKLCDDGLSHEVRVVLGNKPV
Ga0193718_11036982	3300019999	Soil	SRGVILVELDGVSAAGKTVRLCDDGLSHEVRVVLGNKPV
Ga0193735_11347291	3300020006	Soil	IAVENPDHCSRGVILMELDGVSAANKTVRLCDDGLSHKIRVVLGNKPI
Ga0193721_10042546	3300020018	Soil	CSEGVVLMELDGVAVADKIVTLRDDALPHEVRVVLGTKPST
Ga0222622_100129355	3300022756	Groundwater Sediment	TVYHIAVENPDHCSRGVTLVELDGVPAADKIVTLRDDALPHDVRVVLGITPSA
Ga0193714_10075263	3300023058	Soil	CGGVVLVELDGVAAADKIVALRNDALHHEVRVVLGSKPAM
Ga0207692_111161431	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RGVTLMELDGVAAAEKIVTLRDDALLHEVRVVLGTEPAA
Ga0207680_102394831	3300025903	Switchgrass Rhizosphere	GVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA
Ga0207681_105527401	3300025923	Switchgrass Rhizosphere	DQCSRGVVVTELDGVSAANNIVNLCDDGVSHEVRVVLGNKPPA
Ga0207690_104034942	3300025932	Corn Rhizosphere	PDHCSRGVVLVELDGVATADKTVTLRNDALPHEVRVVLGIKPPDLDG
Ga0207670_105994373	3300025936	Switchgrass Rhizosphere	DHCCRGVVVTELDGVSAANNIVNLRDDGVSHEVRVVLGNKPPA
Ga0207678_108210573	3300026067	Corn Rhizosphere	RGVIVMELDGVTVAGKAAKLSDDGLPHEVRVVLGNKPPA
Ga0209688_10953522	3300026305	Soil	SRGVTLVELDGVAAADKIVTLRDDALPHEVRVVLGTEPPA
Ga0209470_10220397	3300026324	Soil	PDHCSRGVTLVELDGIAVADKIVTLRDDALPHEVRVVLGTKPSL
Ga0209152_101145113	3300026325	Soil	LVEVDEVLAADKTVRLRDDGLPHEVRVVLGNKPPV
Ga0257173_10658021	3300026360	Soil	RGVTLVELDGVAALDKIVRLRDDALPHDVRVVLGTKPPT
Ga0209157_12236193	3300026537	Soil	SGVTLVEVDGIMVANKIVTLRDDGLRHEVRVVLGT
Ga0209157_13818612	3300026537	Soil	VENPVHCSSGVTLVEVDGITVADKIVTLRDDALRHEVRVVLGT
Ga0209156_104229392	3300026547	Soil	QNTLYRIAVENPVHCSSGVTLVEIDGIAVADKIVRLRDDALPHEVRVVLGMEPQT
Ga0209474_107479161	3300026550	Soil	DHCSRGVTLVELDGVAVADKIVTLRDDALPHEVRVVLGTKPPS
Ga0179587_106373733	3300026557	Vadose Zone Soil	GVILMELDGVSAVDKTVTLCDDGLPHEVRVVLGNKPV
Ga0207475_10152021	3300026867	Soil	RGVIVMELDGVSVADKTMKLCDDGLPHEVRVVLGNKPPA
Ga0268265_104465522	3300028380	Switchgrass Rhizosphere	SRGVVLVELDGVAATDKIVTLRNDALPHEVRVVLGIKPPDLDG
Ga0307295_101032761	3300028708	Soil	TTYRMAVENPDHCSRGVILMELDGVSAADKTVRLCDDGLFHEVRVVLGNKPM
Ga0307299_103200132	3300028793	Soil	YSIAVENPDHCSRGVTLVELDGVPAADKIVTLRDDALPHDVRVVLGITPSA
Ga0307310_104418103	3300028824	Soil	ENPDHCSRGVVVMELDGASAADKTVRLSDDGLPHEVRVVMGSKAAV
Ga0307278_100869631	3300028878	Soil	EGVVLMELDGVAVADKIVTLRDDALPHEVRVVLGTKPST
Ga0075386_120602062	3300030916	Soil	VENPDHCSRGVMLMELDGVSAADKTVKLCDDGLPHEVRVVLGNIPPV
Ga0170824_1004968771	3300031231	Forest Soil	PDHCSRGVIVMELDGVSAGDKTVKLCDDGLPHEVRVVLGNKPPV
Ga0170824_1283209091	3300031231	Forest Soil	PDRCSRGVILMELDGVSAADKTVKLCDDGLPHDVRVVLGNKPPV
Ga0170820_100213881	3300031446	Forest Soil	RGVILMELDGVSTAYKTVRLRDDGLPHEVRVVLGNKPPV
Ga0170820_157675484	3300031446	Forest Soil	SRGVTVMELDGVSAAEKTVKLCDDGLPHEVRVVLGNKPPV
Ga0170818_1046325851	3300031474	Forest Soil	LVELDGVAAADEIVTLRNDSLPHEVRVVLGIKLPT
Ga0310813_108632142	3300031716	Soil	IENPDHCSRGVTLVELDGVVAADKIVTLRNDMLSHEVRVVLGTKPPT
Ga0310917_104055671	3300031833	Soil	RGVILLEVDGVSTADKKIKLRDDGQTHEVRVVLGNKPA
Ga0310917_110502252	3300031833	Soil	EHCSRGVTLLELDGVAVADKLVTLRDDALSHQVRVVLGTKSPA
Ga0306923_116081761	3300031910	Soil	QMELDGVSVTDKTVRLRDDGLPHEIRVVLGNKPPM
Ga0310902_104802741	3300032012	Soil	NPDHCSRGVIVMELDGVSAADNTVRLSDDGLPHEVRVVLGNKPPA
Ga0318533_105741201	3300032059	Soil	RGVILLEVDGVSTADKKIKLLDDGQTHEVRVVLGNKPA
Ga0307472_1025076712	3300032205	Hardwood Forest Soil	NPEDCSRGVTLVELDGIAVADKIVTLRDDALPHEVRVVLGTKPST
Ga0310812_100340321	3300032421	Soil	HISVENPEHCSSGVVVTTVDGVSAADDVVNLSDDGVQHEVRVVLGNKPRA

Hidden Markov Model


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