Metagenome / Metatranscriptome Family F073360

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073360
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	55 residues
Representative Sequence	MNPDLGSGRSISYEAHFKHAMLQMETGRKTADSPVLRDKPAISPRNVSDGKWTRPRI
Number of Associated Samples	76
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	40.34 %
% of genes near scaffold ends (potentially truncated)	60.00 %
% of genes from short scaffolds (< 2000 bps)	78.33 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (85.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (58.333 % of family members)
Environment Ontology (ENVO)	Unclassified (75.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.24% β-sheet: 0.00% Coil/Unstructured: 71.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00583	Acetyltransf_1	11.67
PF09826	Beta_propel	5.83
PF01866	Diphthamide_syn	4.17
PF01546	Peptidase_M20	4.17
PF00441	Acyl-CoA_dh_1	2.50
PF04261	Dyp_perox	1.67
PF04945	YHS	1.67
PF08282	Hydrolase_3	0.83
PF02012	BNR	0.83
PF01256	Carb_kinase	0.83
PF13508	Acetyltransf_7	0.83
PF13192	Thioredoxin_3	0.83
PF05175	MTS	0.83
PF06271	RDD	0.83
PF01694	Rhomboid	0.83
PF02697	VAPB_antitox	0.83
PF02830	V4R	0.83
PF13476	AAA_23	0.83
PF03686	UPF0146	0.83
PF01641	SelR	0.83
PF13847	Methyltransf_31	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1736	Diphthamide synthase subunit DPH2	Translation, ribosomal structure and biogenesis [J]	4.17
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.50
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	1.67
COG0063	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain	Nucleotide transport and metabolism [F]	0.83
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	0.83
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.83
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.83
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1255	Predicted small methyltransferase MTH1000, UPF0146 family	General function prediction only [R]	0.83
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.83
COG1719	Predicted hydrocarbon binding protein, contains 4VR domain	General function prediction only [R]	0.83
COG1753	Predicted antitoxin, CopG family	Defense mechanisms [V]	0.83
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.83
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.83
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	85.00 %
Unclassified	root	N/A	10.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.17 %

Name	Rank	Taxonomy	Distribution
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	20.00 %
Unclassified	root	N/A	10.83 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	10.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.50 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	20.00 %
Unclassified	root	N/A	10.83 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	6.67 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.50 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.67 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	20.00 %
Unclassified	root	N/A	10.83 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	6.67 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.50 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	1.67 %
unclassified Thermoproteota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	20.00 %
Unclassified	root	N/A	10.83 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	6.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.50 %
Thaumarchaeota archaeon 13_1_40CM_3_50_5	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_3_50_5	1.67 %
Crenarchaeota archaeon 13_1_40CM_3_52_4	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_40CM_3_52_4	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10075352	All Organisms → cellular organisms → Archaea	1063	Open in IMG/M
3300002558\|JGI25385J37094_10103001	All Organisms → cellular organisms → Archaea	842	Open in IMG/M
3300002561\|JGI25384J37096_10139871	All Organisms → cellular organisms → Archaea	785	Open in IMG/M
3300002562\|JGI25382J37095_10188812	All Organisms → cellular organisms → Archaea	629	Open in IMG/M
3300002911\|JGI25390J43892_10001736	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4589	Open in IMG/M
3300002911\|JGI25390J43892_10001966	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4358	Open in IMG/M
3300005166\|Ga0066674_10010696	All Organisms → cellular organisms → Archaea	3783	Open in IMG/M
3300005166\|Ga0066674_10025031	All Organisms → cellular organisms → Archaea → TACK group	2607	Open in IMG/M
3300005166\|Ga0066674_10497413	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300005167\|Ga0066672_10253478	All Organisms → cellular organisms → Archaea	1133	Open in IMG/M
3300005167\|Ga0066672_11025666	Not Available	502	Open in IMG/M
3300005172\|Ga0066683_10241809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1118	Open in IMG/M
3300005174\|Ga0066680_10048348	Not Available	2488	Open in IMG/M
3300005174\|Ga0066680_10249114	All Organisms → cellular organisms → Archaea	1128	Open in IMG/M
3300005174\|Ga0066680_10753302	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	591	Open in IMG/M
3300005176\|Ga0066679_10239927	All Organisms → cellular organisms → Archaea	1165	Open in IMG/M
3300005178\|Ga0066688_10149703	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	1461	Open in IMG/M
3300005178\|Ga0066688_10476123	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	806	Open in IMG/M
3300005180\|Ga0066685_10308373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1096	Open in IMG/M
3300005181\|Ga0066678_10322762	All Organisms → cellular organisms → Archaea	1015	Open in IMG/M
3300005181\|Ga0066678_10470514	All Organisms → cellular organisms → Archaea	836	Open in IMG/M
3300005181\|Ga0066678_10585186	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	742	Open in IMG/M
3300005186\|Ga0066676_10010970	All Organisms → cellular organisms → Bacteria	4460	Open in IMG/M
3300005186\|Ga0066676_10558755	All Organisms → cellular organisms → Archaea	776	Open in IMG/M
3300005186\|Ga0066676_10746777	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_3_50_5	665	Open in IMG/M
3300005447\|Ga0066689_10971215	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	523	Open in IMG/M
3300005447\|Ga0066689_11000005	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	515	Open in IMG/M
3300005451\|Ga0066681_10328338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	938	Open in IMG/M
3300005540\|Ga0066697_10662073	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	574	Open in IMG/M
3300005552\|Ga0066701_10180753	All Organisms → cellular organisms → Archaea	1285	Open in IMG/M
3300005552\|Ga0066701_10710423	All Organisms → cellular organisms → Archaea	603	Open in IMG/M
3300005553\|Ga0066695_10056161	All Organisms → cellular organisms → Archaea	2349	Open in IMG/M
3300005553\|Ga0066695_10852215	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	522	Open in IMG/M
3300005555\|Ga0066692_10701237	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	628	Open in IMG/M
3300005557\|Ga0066704_10400905	All Organisms → cellular organisms → Archaea	911	Open in IMG/M
3300005557\|Ga0066704_10620361	All Organisms → cellular organisms → Archaea	692	Open in IMG/M
3300005559\|Ga0066700_10219184	All Organisms → cellular organisms → Archaea	1320	Open in IMG/M
3300005559\|Ga0066700_10394752	All Organisms → cellular organisms → Archaea	975	Open in IMG/M
3300005559\|Ga0066700_10443392	All Organisms → cellular organisms → Archaea	912	Open in IMG/M
3300005568\|Ga0066703_10020719	All Organisms → cellular organisms → Archaea	3389	Open in IMG/M
3300005568\|Ga0066703_10319320	All Organisms → cellular organisms → Archaea	937	Open in IMG/M
3300005569\|Ga0066705_10366172	All Organisms → cellular organisms → Archaea → Euryarchaeota	907	Open in IMG/M
3300005569\|Ga0066705_10947704	All Organisms → cellular organisms → Archaea	510	Open in IMG/M
3300005575\|Ga0066702_10083494	All Organisms → cellular organisms → Archaea	1792	Open in IMG/M
3300005575\|Ga0066702_10646175	Not Available	632	Open in IMG/M
3300005576\|Ga0066708_10776163	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	602	Open in IMG/M
3300005586\|Ga0066691_10122688	All Organisms → cellular organisms → Archaea	1476	Open in IMG/M
3300005586\|Ga0066691_10134468	All Organisms → cellular organisms → Archaea	1413	Open in IMG/M
3300005586\|Ga0066691_10353116	All Organisms → cellular organisms → Archaea	870	Open in IMG/M
3300005586\|Ga0066691_10725269	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	587	Open in IMG/M
3300005598\|Ga0066706_11207125	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	574	Open in IMG/M
3300006791\|Ga0066653_10776113	Not Available	503	Open in IMG/M
3300006796\|Ga0066665_10037960	All Organisms → cellular organisms → Archaea	3228	Open in IMG/M
3300006796\|Ga0066665_11277825	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	562	Open in IMG/M
3300006797\|Ga0066659_10890132	Not Available	743	Open in IMG/M
3300006797\|Ga0066659_11296289	Not Available	608	Open in IMG/M
3300009012\|Ga0066710_103189349	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	630	Open in IMG/M
3300010126\|Ga0127482_1107269	All Organisms → cellular organisms → Archaea	519	Open in IMG/M
3300010301\|Ga0134070_10287992	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	623	Open in IMG/M
3300010304\|Ga0134088_10668588	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	520	Open in IMG/M
3300010335\|Ga0134063_10156516	All Organisms → cellular organisms → Archaea	1059	Open in IMG/M
3300010337\|Ga0134062_10005560	All Organisms → cellular organisms → Archaea	4511	Open in IMG/M
3300012198\|Ga0137364_10093786	All Organisms → cellular organisms → Archaea	2101	Open in IMG/M
3300012198\|Ga0137364_11052834	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	613	Open in IMG/M
3300012199\|Ga0137383_10081800	All Organisms → cellular organisms → Archaea	2334	Open in IMG/M
3300012199\|Ga0137383_10985193	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	614	Open in IMG/M
3300012201\|Ga0137365_10214478	Not Available	1437	Open in IMG/M
3300012201\|Ga0137365_10709600	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300012202\|Ga0137363_10960575	All Organisms → cellular organisms → Archaea	725	Open in IMG/M
3300012206\|Ga0137380_10103043	All Organisms → cellular organisms → Archaea	2608	Open in IMG/M
3300012206\|Ga0137380_10153411	All Organisms → cellular organisms → Archaea	2100	Open in IMG/M
3300012206\|Ga0137380_10712784	All Organisms → cellular organisms → Archaea	870	Open in IMG/M
3300012207\|Ga0137381_10097426	All Organisms → cellular organisms → Archaea	2490	Open in IMG/M
3300012207\|Ga0137381_10333008	All Organisms → cellular organisms → Archaea	1323	Open in IMG/M
3300012207\|Ga0137381_10963591	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_40CM_3_52_4	736	Open in IMG/M
3300012208\|Ga0137376_10009842	All Organisms → cellular organisms → Archaea	6763	Open in IMG/M
3300012209\|Ga0137379_10828977	All Organisms → cellular organisms → Archaea	830	Open in IMG/M
3300012211\|Ga0137377_11019734	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	758	Open in IMG/M
3300012285\|Ga0137370_10384031	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_3_50_5	849	Open in IMG/M
3300012285\|Ga0137370_10450755	All Organisms → cellular organisms → Archaea	784	Open in IMG/M
3300012349\|Ga0137387_10161960	All Organisms → cellular organisms → Archaea	1597	Open in IMG/M
3300012349\|Ga0137387_10203126	All Organisms → cellular organisms → Archaea	1423	Open in IMG/M
3300012349\|Ga0137387_10873127	All Organisms → cellular organisms → Archaea	651	Open in IMG/M
3300012350\|Ga0137372_10029302	All Organisms → cellular organisms → Archaea	5056	Open in IMG/M
3300012351\|Ga0137386_10833743	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	662	Open in IMG/M
3300012351\|Ga0137386_11003932	Not Available	593	Open in IMG/M
3300012351\|Ga0137386_11136745	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	550	Open in IMG/M
3300012356\|Ga0137371_10424830	All Organisms → cellular organisms → Archaea	1030	Open in IMG/M
3300012359\|Ga0137385_11405158	All Organisms → cellular organisms → Archaea	561	Open in IMG/M
3300012359\|Ga0137385_11668424	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	501	Open in IMG/M
3300012362\|Ga0137361_10300363	All Organisms → cellular organisms → Archaea	1469	Open in IMG/M
3300012976\|Ga0134076_10436227	Not Available	589	Open in IMG/M
3300018468\|Ga0066662_10050447	All Organisms → cellular organisms → Archaea	2647	Open in IMG/M
3300018468\|Ga0066662_12931836	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	507	Open in IMG/M
3300026297\|Ga0209237_1135993	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	995	Open in IMG/M
3300026298\|Ga0209236_1007880	All Organisms → cellular organisms → Archaea	6381	Open in IMG/M
3300026298\|Ga0209236_1008785	All Organisms → cellular organisms → Bacteria	6005	Open in IMG/M
3300026300\|Ga0209027_1153783	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	781	Open in IMG/M
3300026301\|Ga0209238_1035510	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	1836	Open in IMG/M
3300026306\|Ga0209468_1087711	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1027	Open in IMG/M
3300026309\|Ga0209055_1004984	All Organisms → cellular organisms → Archaea	7743	Open in IMG/M
3300026309\|Ga0209055_1063072	Not Available	1563	Open in IMG/M
3300026313\|Ga0209761_1009167	All Organisms → cellular organisms → Archaea	6451	Open in IMG/M
3300026318\|Ga0209471_1079184	Not Available	1454	Open in IMG/M
3300026324\|Ga0209470_1332083	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	550	Open in IMG/M
3300026326\|Ga0209801_1114209	All Organisms → cellular organisms → Archaea	1160	Open in IMG/M
3300026328\|Ga0209802_1178236	All Organisms → cellular organisms → Archaea	855	Open in IMG/M
3300026331\|Ga0209267_1193444	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	786	Open in IMG/M
3300026332\|Ga0209803_1162302	All Organisms → cellular organisms → Archaea	855	Open in IMG/M
3300026333\|Ga0209158_1136287	All Organisms → cellular organisms → Archaea	908	Open in IMG/M
3300026333\|Ga0209158_1294500	All Organisms → cellular organisms → Archaea	558	Open in IMG/M
3300026334\|Ga0209377_1140868	All Organisms → cellular organisms → Archaea	931	Open in IMG/M
3300026343\|Ga0209159_1223357	Not Available	581	Open in IMG/M
3300026528\|Ga0209378_1025078	All Organisms → cellular organisms → Archaea	3236	Open in IMG/M
3300026528\|Ga0209378_1193382	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	690	Open in IMG/M
3300026532\|Ga0209160_1032382	All Organisms → cellular organisms → Archaea	3271	Open in IMG/M
3300026536\|Ga0209058_1088370	All Organisms → cellular organisms → Archaea	1603	Open in IMG/M
3300026550\|Ga0209474_10093315	All Organisms → cellular organisms → Archaea	2040	Open in IMG/M
3300027748\|Ga0209689_1221083	All Organisms → cellular organisms → Archaea	811	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	70.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	58.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100753522	3300002558	Grasslands Soil	MSLDLGSWRSVSYEAHFKRALIEMETGRKIAYSPVLRDNPGVSPRNVSTSEWILPRI*
JGI25385J37094_101030011	3300002558	Grasslands Soil	MNPDLGSGRGISYEAQYKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI*
JGI25384J37096_101398711	3300002561	Grasslands Soil	ISYDAHFKHALIQMETGRKMADPPVLREKPAISPRNVTDGERTHPRI*
JGI25382J37095_101888122	3300002562	Grasslands Soil	MNPDLGSGRGISYEAQFKRAMIQMKTGRKSAYSPVLRDKPGISRGNVSDGE
JGI25390J43892_100017365	3300002911	Grasslands Soil	AHFKHAMLQMETGRKTAGSPVLREKGVISPGNVSDGERNRLRI*
JGI25390J43892_100019665	3300002911	Grasslands Soil	AHFKHAMLQMETGRKTAGSPVLREKGVISPGNVSDGQRTRPRI*
Ga0066674_100106961	3300005166	Soil	RSISYEAHFKHAMLQMETGRKTAGSPVLREKGVISPGNVSDGERNRLRI*
Ga0066674_100250312	3300005166	Soil	MREMNPDLGSGTGVSYEAHFKRAMLQMETDRKTANSPVLRNKLGISPGNLSDGEWARPRI
Ga0066674_104974131	3300005166	Soil	MNPDLGSGRSISYEAHFKHAMLQMETGRKTAGSPVLREKGVISPGNV
Ga0066672_102534781	3300005167	Soil	MNPDLGSGRRISYEAQFKHALIQMETGRKIADSPVLGGKSIFSPGNVSTSEWIVPRI*
Ga0066672_110256661	3300005167	Soil	MNPDLGSGRSISHEAHFKHAILQVDTSQKIADSPVLRGKSKISLENVSDSEQPLSRI*
Ga0066683_102418091	3300005172	Soil	MNPDLKSGRSISYEAHFKHAMLQMEPSRKTADSPVLREKPALSPRNVSDSE
Ga0066680_100483484	3300005174	Soil	MNPDLGSGRGISYEAHFKHAMIRMETVRKGADSPVPRDKPGISPRNVSDGEGSLPRI*
Ga0066680_102491143	3300005174	Soil	MNPDLGSGRRISYEAHFKHALLQMEPGRKGAESPVPRDKPGMSPRNVSDGELTLPGI*
Ga0066680_107533022	3300005174	Soil	MNPDLGSGRSISYEAHFKHAILQVDTSQKIADSPVLRGKSKISLENVSDSEQPLSRI*
Ga0066679_102399272	3300005176	Soil	MNPDLGSGRSISYEAEFKHAMIQMEPGRKIADSPVPRDKPGISPRNVSDGERTLPGI*
Ga0066688_101497032	3300005178	Soil	MNPDLGSGRSISYEAQFKHAMIQMKTGRKIADSPVPRDKPAISPRIVSDSEWILPRI*
Ga0066688_104761231	3300005178	Soil	MNPDLGSGRSIPYEAHFNHALLQVDTSQKIADSLVLHDKPAISPRNVSDGE
Ga0066685_103083731	3300005180	Soil	MKPDIGSGRSISYEAHFKHAMLQMETGRKTAGSPVLREKGVISPG
Ga0066678_103227621	3300005181	Soil	ASREERRMNPDPGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI*
Ga0066678_104705141	3300005181	Soil	SGRSISYEAHFKHALIQMETGRKIADSPVLRDKPAISPRNVSDNEWILPRI*
Ga0066678_105851862	3300005181	Soil	MNPDLGSGRSISYEAQFKHAMIQMKTGRKIADSPVPRDKPGISPRNVSTSEWVLPRI*
Ga0066676_100109701	3300005186	Soil	MKPDIGSGRSISYEAHFKHAMLQMETGRKTAGSPVLREKGVISPGNV
Ga0066676_105587551	3300005186	Soil	DLGSGRSISYEAHFKHAMIQMETGRKGADSPVLRDKPGISPRNVSDSEWTLPGI*
Ga0066676_107467771	3300005186	Soil	RSISYEAHFKHAMLQMETGRKTAGSPVLREKGVISPGNVSDGQRTRPRI*
Ga0066689_109712151	3300005447	Soil	GHGMNPDLGSGRSISYAAHFKRALIQMETGRKTADSPVLRDKPGISPRNISDSERTRPRI
Ga0066689_110000051	3300005447	Soil	RMNPDLGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI*
Ga0066681_103283382	3300005451	Soil	MKPDIGSGRSISYEAHFKHAMLQMETGRKTAGSPVLREKGVISPGN
Ga0066697_106620731	3300005540	Soil	PDLGSGRSISYEAQFKHALLQVDTSRKIADSPVLRDKPGIPPRNVSGRK*
Ga0066701_101807532	3300005552	Soil	MNPDLGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI*
Ga0066701_107104231	3300005552	Soil	MNPDLKSRMSTSYGAHFKHAMLQMETGRKTADSPVLREKPLISPRNVSDGERTR
Ga0066695_100561611	3300005553	Soil	CPVTQKLSLRNNFKMKPDLGSGRSISYEAHFKHAMLQMETGRKTADSPVLRDKPAISPRNVSDGKWTRPRI*
Ga0066695_108522151	3300005553	Soil	GRSISYEAHFKHAMLQMEPSQETADSPVLREKPALSPRNVSDSEWTLLGI*
Ga0066692_107012371	3300005555	Soil	SISYEAHFKHAMLQMETGRKTADSPVLRDKPAISPRNVSDGKWTRPRI*
Ga0066704_104009051	3300005557	Soil	MNPDLGSGRSISYEAHFKHAMLQMETGRKTADSPVLRDKPAISPRNVSDGKWTR
Ga0066704_106203611	3300005557	Soil	MNPDLGSGRRISYEAHFKHALIQMETGRKIADSPVLRGKSIFSPGNVSDGERTLLGI*
Ga0066700_102191842	3300005559	Soil	SGRSVSYEAHFKHASIQMETGRKIADSLVLRDKPAISPRNGSDNEWILPRI*
Ga0066700_103947522	3300005559	Soil	MIPEVLPGKKRRMNPDLRSGRSISYEAHLKHAMIQMKTGRKIADSPVPRDKPAISPRIVSDSEWILPRI*
Ga0066700_104433921	3300005559	Soil	MNPDPGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI*
Ga0066703_100207195	3300005568	Soil	MNPDLGSGRGISYEAQFKHAMIQMETGRKIADSPVPRDNPGISPRNVSTSEWIVPRI*
Ga0066703_103193202	3300005568	Soil	MNPDLGSGRRISYEAQFKHALIQMETGRKIADSPVLGGKSIFSPGNVSTSEWIVLRI*
Ga0066705_103661721	3300005569	Soil	MNPDLGSGRGISYEAQFKHAMIQMKTGRKAADSPVPRDKPGISPRNVSDAE
Ga0066705_109477042	3300005569	Soil	MNPDPGSGRSISYEAHFKHAILQMETGRKTADSPVLREKQVISPRNVSDGEWTRPRIQKKTFPR
Ga0066702_100834944	3300005575	Soil	MNPDLGSGRRISYEAQFKHAMMEMETGRKGADSPVLGGKSIFSPGNVSTSEWIVPRI*
Ga0066702_106461752	3300005575	Soil	MNPDLGSGTGISYGAQFKHALMQVEPGRKGADSLVLRGKSKISLENVSDSERPPSRI*
Ga0066708_107761631	3300005576	Soil	MNHDPGSGTGISYDAQFKHALLQVDTSRKIADLPVLRDKPAISPRNV
Ga0066691_101226882	3300005586	Soil	MNPDPGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDGEGSLPRI*
Ga0066691_101344682	3300005586	Soil	MCLDLGSGRSVSYEAHFKRALIEMETGRKIAYSPVLRDNPGVSPRNVSTSEWILPRI*
Ga0066691_103531162	3300005586	Soil	GHGMNPDLGSGRSIPYEAHFKHALLQMETGRKTADSPVLRDKPII*
Ga0066691_107252692	3300005586	Soil	RMNPDLGSGRGISYEAQFKHAMIQMETGRKGADSPVPHDKLGISLRNVSDSEWIVPRI*
Ga0066706_112071252	3300005598	Soil	MNPDLGSGRSITYEAQFKHAILQMETGRKTADSPVLREKPAISPRNVSDGKRTRPRI*
Ga0066653_107761131	3300006791	Soil	GTGVSYEAHFKRAMLQMETDRKTANSPVLRNKLGISPGNLSDGEWARPRI*
Ga0066658_100076603	3300006794	Soil	MIPEVLAEKKRRTNPDLGTGMGTSYEAHFKHAMMQMKTGRKTADSPFLRDKPGISPRNVSASEWTLPRIYKKKYFPRHKPRS*
Ga0066665_100379604	3300006796	Soil	MNPDLGSGRGISYEAQFKHAMIQMKTGRKAADSPVPRDKPGISPRNVSDAEETLPRI*
Ga0066665_112778251	3300006796	Soil	SGRSISYEAQFKHAMIQMKTGRKIADSPVPRDKPGISPRNVSTSEWVLPRI*
Ga0066659_108901322	3300006797	Soil	MNPDLGSGRRISYEAYFKRALIQMETGRKTADSPVLREKQLILPRNVSDGERT
Ga0066659_112962891	3300006797	Soil	FSSRSSSDQRSERSVSYEAHLKHSMIQMETGRKIADSPVLRDKGIISLRNVSDSEWILPRI*
Ga0066710_1031893492	3300009012	Grasslands Soil	MNPDLGSGRGISYEAHFKHALLQMETGGKIADSPVLREKQVISPRNVSDSQRILPRI
Ga0127482_11072691	3300010126	Grasslands Soil	MNPDLGSGRSISYEAHFKHAMLQMETGRKTADSPVLRDKPAISPRNVSDGK
Ga0134070_102879921	3300010301	Grasslands Soil	LGSGTGISYEAQFKHALLQVDTSRKIADSPVLRDKPGIPPRNVSGRK*
Ga0134088_106685881	3300010304	Grasslands Soil	RLSKGHIPHPEIDFSSRSSSDQRSGRSVSYEAHLKHSMIQMETGRKIADSPVLRDKGIISLRNVSDSEWILPRI*
Ga0134063_101565162	3300010335	Grasslands Soil	MNADPGSGRSISYEVHFNLAIIQMETGRKIADSPVLRDKAGISLGALT
Ga0134062_100055601	3300010337	Grasslands Soil	LNPDLGSGRSISYEAHFKHALIQMETGRKTADSPVLRDKPAISPRNVFRWQVDPS*
Ga0137364_100937862	3300012198	Vadose Zone Soil	MNPDLGSGRGVSYEAHFKHALLQMETGRKTADSPVPRDKPGISPRNIPDSRRALPGI*
Ga0137364_110528342	3300012198	Vadose Zone Soil	KMKPDLGSGRSISYEAHFKHAMLQMEPSQETADSPVLREKQLISPRNVSDGERTRLRI*
Ga0137383_100818002	3300012199	Vadose Zone Soil	MNPDLGSGRSISYEAQFKHAMIQMETGRKGAESPVPRDKPGIPPRNVSDGERTLSRI*
Ga0137383_109851931	3300012199	Vadose Zone Soil	EERRMNPDLGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI*
Ga0137365_102144784	3300012201	Vadose Zone Soil	MNPDPGSGRSISYEAHFKHAMLQMETGRKTADSPVLREK
Ga0137365_107096001	3300012201	Vadose Zone Soil	SISYEAHFKHALIQMETGRKIADSPVLREKPVISPKTVSDGEWTRPRI*
Ga0137363_109605752	3300012202	Vadose Zone Soil	MNPDLGFGRGTSYEAHFKHELIQMETGRKIADSPVLLKNQVISPENASDGEQ
Ga0137380_101030431	3300012206	Vadose Zone Soil	GATKSPRMNPDPGSGRSISYEAHLKHAMIQMETGRKIADSAVLREKQVISPGNVSDGERTRPRI*
Ga0137380_101534112	3300012206	Vadose Zone Soil	MNPDLGSGRGISYEAHFKHALIQMETGRKIADSPVPRDKPGISPRNIPDSRRALPGI*
Ga0137380_107127841	3300012206	Vadose Zone Soil	MNPDPGSGRNISYEAHFKHAMLQMEPSQETADSPVLSEKPALSPRNVSDIEWTLLGI*
Ga0137381_100974265	3300012207	Vadose Zone Soil	SLLSAKGDGMNPDPGSGSSISYEADFKRALLQMDACRKRADSRVPRDKPGVSPRNVSDGGWTCPRI*
Ga0137381_103330082	3300012207	Vadose Zone Soil	MNPDLGSGRGVSYEAHFKHALLQVETGRKTADSPVPRDKPGISPRNIPDSRRALPGI*
Ga0137381_109635911	3300012207	Vadose Zone Soil	ISYEAHFKHAMLQMETGRKTADSPVLREKPALSPRNVSDSEWTLLGI*
Ga0137376_1000984213	3300012208	Vadose Zone Soil	MNPDLGSGRSISYEAHFKHAMLQMETGRKTADSPVLRDKPAISPRNVSDGKWTRPRI*
Ga0137379_108289771	3300012209	Vadose Zone Soil	RGRMNPDPGSGRSISYEAHFKHAMLQMEPSQETADSPVLREKPALSPRNVSDSEWTLLGI
Ga0137377_110197342	3300012211	Vadose Zone Soil	LLSAKGRGMNPDLGSGRSISYEAHFKHALIQMETGRKGADSPVLRDKPVISPRDVSDGEWTRPRI*
Ga0137370_103840312	3300012285	Vadose Zone Soil	YFGDQEILSPKSLRMNPDLGSGRGVSYEAHVKHAMLQMETGRKTADSPVLREKPLISPRNVSDGERTRPRI*
Ga0137370_104507551	3300012285	Vadose Zone Soil	YEAHFKHAMLQMEPSQETADSPVLREKPALSPRNVSDSEWTLLGI*
Ga0137387_101619601	3300012349	Vadose Zone Soil	MNPDPGSGRSISYEAHLKHAMIQMETGRKIADSAVLREKQVISPGNVSDGERTRPRI*
Ga0137387_102031261	3300012349	Vadose Zone Soil	MNPDLGSGRSISYEDHFKHALIQMETGRKTADSPVLRDKPAIWPRN
Ga0137387_108731271	3300012349	Vadose Zone Soil	MNPDPGSGRSISYEAHFKHAMLQMETGRKTADSPVLR
Ga0137372_100293025	3300012350	Vadose Zone Soil	MNPDPGSGRSISYEAHFKHAMLQMETGRKTADSPVLREKPALSPRNVSDSEWTLLGI*
Ga0137386_108337432	3300012351	Vadose Zone Soil	NPDPGSGRSISYEAHFKHAMLQMETGRKTADSPVLREKPALSPRNVSDSEWTLLGI*
Ga0137386_110039321	3300012351	Vadose Zone Soil	IRPDLGSGTGISYDAQFKHALLQVDTSRKIADSPVLRDKPGIPPRNVSGRK*
Ga0137386_111367452	3300012351	Vadose Zone Soil	MNPDLGSGRSISYEAHFKHAILQVDTSQKIADSPVLRGKSKISLENVSDSEQPLSR
Ga0137371_104248301	3300012356	Vadose Zone Soil	MNPDLGPGRSISYEAQFKRALLQMEPSRKTADSPVLRDKGIISPRNVSDSEWILPRV
Ga0137385_114051582	3300012359	Vadose Zone Soil	MNPDLGSGGSVSYEAHFKHALIQMETGRKTADSPVLREK
Ga0137385_116684242	3300012359	Vadose Zone Soil	GRSISYEAHFKHAMLQMETGRKTADSPVLREKQLISPRNDSDGERTRPGI*
Ga0137361_103003631	3300012362	Vadose Zone Soil	KLLLAAKGRGMNPDLGSGRSISYEAHFKHALIQMKSGRKTADSPVLREKPAIRLETFSDGEWTRPRI*
Ga0134076_104362272	3300012976	Grasslands Soil	SERSVSYEAHLKHSMIQMETGRKIADSPVLRDKGIISLRNVSDSEWILPRI*
Ga0066662_100504474	3300018468	Grasslands Soil	MNPDLGSGRGISYEAHFKHAMIRMETVRKGADSPVPRDKPGISPRNVSDGEGSLPRI
Ga0066662_129318361	3300018468	Grasslands Soil	MNPDLGSGRGISYEAQYKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI
Ga0209237_11359932	3300026297	Grasslands Soil	MNPDLGSGRGISYEAQFKHAMIQMETGRKGADSPVPHDKLGISLRNVSDSEWIVPRI
Ga0209236_10078806	3300026298	Grasslands Soil	MNPDLGSGRGISYEAHFKHAMIRMETVRKGADSPVPRDKPGISPRNVSDGEGIPPRI
Ga0209236_10087852	3300026298	Grasslands Soil	MSLDLGSWRSVSYEAHFKRALIEMETGRKIAYSPVLRDNPGVSPRNVSTSEWILPRI
Ga0209027_11537831	3300026300	Grasslands Soil	LNPDLGSGRSISYEAHFKHALIVMETGRKTADSPVLRDKPGISPRNVFRWQVDRPRI
Ga0209238_10355103	3300026301	Grasslands Soil	MNPDLGSGRSISYEAQFKHAMIQMKTGRKIADSPVPRDKPGISPRNVSTSEWVL
Ga0209468_10877111	3300026306	Soil	RNNFKMKPDIGSGRSISYEAHFKHAMLQMETGRKTAGSPVLREKGVISPGNVSDGERNRLRI
Ga0209055_10049842	3300026309	Soil	MNPDLGSGRRISYEAQFKHALIQMETGRKIADSPVLGGKSIFSPGNVSTSEWIVPRI
Ga0209055_10630722	3300026309	Soil	MNPDLGSGRRISYEAQFKHAMMEMETGRKGADSPVLGGKSIFSPGNVSTSEWIVPRI
Ga0209761_10091678	3300026313	Grasslands Soil	MNPDLGSGRSISYDAHFKHALIQMETGRKMADPPVLREKPAISPRNVTDGERTHPRI
Ga0209471_10791843	3300026318	Soil	MNPDLGSGRRISYEAHFKHALLQMEPGRKGAESPVPRDKPGMSPRNVSDGELTLPGI
Ga0209470_13320832	3300026324	Soil	TNLDLGSGRSISYEAHFKHAMIQMETGRKGADSPVLRDKPGISPRNVSDSEWTLPGI
Ga0209801_11142091	3300026326	Soil	MNPDPGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI
Ga0209802_11782363	3300026328	Soil	MNPDLGSGRGISYEAQFKHPMIQMKTGRKIADSPVPRDKPGISPRNVSDAEETLPRI
Ga0209267_11934441	3300026331	Soil	MNPDLGSGRSIPYEAHFNHALLQVDTSQKIADSLVLHDKPAISPRNVSDGERTRPRI
Ga0209803_11623021	3300026332	Soil	CSRSFRMSLDLGSGRSVSYEAHFKRALIEMETGRKIAYSPVLRDNPGVSPRNVSTSEWILPRI
Ga0209158_11362873	3300026333	Soil	MNPDLGSGRRISYEAQFKHALIQMETGRKIADSPVLGGKSIFSPGNVSTSEWIVLRI
Ga0209158_12945002	3300026333	Soil	MNPDLGSGRSISYEAHFKRALLQMETGRKTADSPVLREKPAISPRS
Ga0209377_11408683	3300026334	Soil	MNPDLGSGRSISYEAHFKHAMLQMETGRKTADSRVRRDKPAISPRNV
Ga0209159_12233571	3300026343	Soil	GRGVSYEAHFKHALLQVETGRKTADSPVPRDKPGISPRNIPDSRRALPGI
Ga0209378_10250783	3300026528	Soil	MNPDLGSGRGISYEAQFKHAMIQMKTGRKAADSPVPRDKPGISPRNVSDAEETLPRI
Ga0209378_11933821	3300026528	Soil	YPPQKGHGMNPDLGSGRSISYAAHFKRALIQMETGRKTADSPVLRDKPGISPRNISDSERTRPRI
Ga0209160_10323824	3300026532	Soil	MNPDPGSGSSISYEAHFKRALLQMATCRKTADSRVARDKPGISPRNVSDGERTLPRI
Ga0209058_10883701	3300026536	Soil	RGLNPDLGSGRSISYEAHFKHALIVMETGRKTADSPVLRDKPII
Ga0209474_100933153	3300026550	Soil	MNADPGSGRSISYEVHFNLAIIQMETGRKIADSPVL
Ga0209689_12210832	3300027748	Soil	MIPEVLPGKKRRMNPDLRSGRSISYEAHLKHAMIQMKTGRKIADSPVPRDKPAISPRIVSDSEWILPRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073360

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences