Metagenome Family F073328

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073328
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	54 residues
Representative Sequence	MFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIVAYYKAKAGLS
Number of Associated Samples	96
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.83 %
% of genes near scaffold ends (potentially truncated)	94.17 %
% of genes from short scaffolds (< 2000 bps)	89.17 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.500 % of family members)
Environment Ontology (ENVO)	Unclassified (35.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.52% β-sheet: 16.05% Coil/Unstructured: 65.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04234	CopC	77.50
PF05425	CopD	4.17
PF13442	Cytochrome_CBB3	3.33
PF09594	GT87	0.83
PF04945	YHS	0.83
PF00702	Hydrolase	0.83
PF02219	MTHFR	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2372	Copper-binding protein CopC (methionine-rich)	Inorganic ion transport and metabolism [P]	77.50
COG1276	Putative copper export protein	Inorganic ion transport and metabolism [P]	4.17
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.00 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	28.33 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	28.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.00 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	28.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.33 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	20.00 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.50 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Aminobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter	20.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.50 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Aminobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter	20.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.50 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Aminobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	16.67 %
Aminobacter sp. J15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15	3.33 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.50 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100146192	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300004156\|Ga0062589_100769481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	867	Open in IMG/M
3300004156\|Ga0062589_102293503	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300004268\|Ga0066398_10081438	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	719	Open in IMG/M
3300004479\|Ga0062595_102393751	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005171\|Ga0066677_10353586	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300005180\|Ga0066685_10545032	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300005181\|Ga0066678_10140615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1501	Open in IMG/M
3300005181\|Ga0066678_10179879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1340	Open in IMG/M
3300005184\|Ga0066671_10144523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1379	Open in IMG/M
3300005184\|Ga0066671_10354775	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005187\|Ga0066675_11332950	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	528	Open in IMG/M
3300005367\|Ga0070667_101241530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	698	Open in IMG/M
3300005447\|Ga0066689_10284756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1023	Open in IMG/M
3300005447\|Ga0066689_10510115	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300005518\|Ga0070699_101964194	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005540\|Ga0066697_10029118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15	3050	Open in IMG/M
3300005546\|Ga0070696_101363532	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005554\|Ga0066661_10765727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	565	Open in IMG/M
3300005555\|Ga0066692_10179635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1315	Open in IMG/M
3300005617\|Ga0068859_100711642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1095	Open in IMG/M
3300005713\|Ga0066905_100216389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1445	Open in IMG/M
3300005713\|Ga0066905_100846493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	796	Open in IMG/M
3300005764\|Ga0066903_101687071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1206	Open in IMG/M
3300005764\|Ga0066903_103120056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	897	Open in IMG/M
3300005764\|Ga0066903_106046430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	634	Open in IMG/M
3300006031\|Ga0066651_10296054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	864	Open in IMG/M
3300006032\|Ga0066696_10977665	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006032\|Ga0066696_10977666	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006046\|Ga0066652_100973313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	807	Open in IMG/M
3300006796\|Ga0066665_10112088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	2018	Open in IMG/M
3300006796\|Ga0066665_11162542	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	588	Open in IMG/M
3300006797\|Ga0066659_11608763	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006845\|Ga0075421_100476040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	1487	Open in IMG/M
3300006854\|Ga0075425_100236296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	2103	Open in IMG/M
3300006854\|Ga0075425_102728005	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300006871\|Ga0075434_101158290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	786	Open in IMG/M
3300006969\|Ga0075419_11055199	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300007076\|Ga0075435_101082646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp.	700	Open in IMG/M
3300009012\|Ga0066710_102364179	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	771	Open in IMG/M
3300009012\|Ga0066710_102472334	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300009012\|Ga0066710_103394072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	605	Open in IMG/M
3300009012\|Ga0066710_103731113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	572	Open in IMG/M
3300009089\|Ga0099828_11790930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	539	Open in IMG/M
3300009100\|Ga0075418_10924964	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009137\|Ga0066709_102712417	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300009147\|Ga0114129_11451528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	845	Open in IMG/M
3300009808\|Ga0105071_1037395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	751	Open in IMG/M
3300009815\|Ga0105070_1136033	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010029\|Ga0105074_1069011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	641	Open in IMG/M
3300010043\|Ga0126380_11850431	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300010046\|Ga0126384_11585952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	616	Open in IMG/M
3300010047\|Ga0126382_10960773	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300010047\|Ga0126382_12158646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	535	Open in IMG/M
3300010322\|Ga0134084_10365357	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300010335\|Ga0134063_10155235	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300010336\|Ga0134071_10273304	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300010359\|Ga0126376_11199259	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300010359\|Ga0126376_11626139	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	679	Open in IMG/M
3300010362\|Ga0126377_11806965	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300010362\|Ga0126377_12284540	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300010366\|Ga0126379_10144057	All Organisms → cellular organisms → Bacteria → Proteobacteria	2208	Open in IMG/M
3300010398\|Ga0126383_11476244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	770	Open in IMG/M
3300010398\|Ga0126383_11558841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	750	Open in IMG/M
3300011271\|Ga0137393_10146000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1971	Open in IMG/M
3300012360\|Ga0137375_10589008	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300012922\|Ga0137394_10052245	All Organisms → cellular organisms → Bacteria	3378	Open in IMG/M
3300012922\|Ga0137394_10244323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1534	Open in IMG/M
3300012927\|Ga0137416_10335996	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300012929\|Ga0137404_10771472	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300012930\|Ga0137407_12245422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300012944\|Ga0137410_10314178	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300012948\|Ga0126375_11137735	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012977\|Ga0134087_10134330	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300015053\|Ga0137405_1344358	All Organisms → cellular organisms → Bacteria	3224	Open in IMG/M
3300015359\|Ga0134085_10031588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15	2064	Open in IMG/M
3300016371\|Ga0182034_11318782	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300016371\|Ga0182034_11760475	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300016404\|Ga0182037_12030254	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300016404\|Ga0182037_12091499	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300017659\|Ga0134083_10333809	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	649	Open in IMG/M
3300017659\|Ga0134083_10494283	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	547	Open in IMG/M
3300018056\|Ga0184623_10209403	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300018063\|Ga0184637_10270036	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1034	Open in IMG/M
3300018063\|Ga0184637_10530836	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	679	Open in IMG/M
3300018468\|Ga0066662_10279241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1387	Open in IMG/M
3300018468\|Ga0066662_10301555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15	1346	Open in IMG/M
3300025986\|Ga0207658_10386233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1227	Open in IMG/M
3300026296\|Ga0209235_1089926	All Organisms → cellular organisms → Bacteria → Proteobacteria	1347	Open in IMG/M
3300026309\|Ga0209055_1123702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	974	Open in IMG/M
3300026326\|Ga0209801_1036400	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300026332\|Ga0209803_1316581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	537	Open in IMG/M
3300026335\|Ga0209804_1188642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	880	Open in IMG/M
3300026446\|Ga0257178_1031100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	664	Open in IMG/M
3300026524\|Ga0209690_1072498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1468	Open in IMG/M
3300026524\|Ga0209690_1181670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	695	Open in IMG/M
3300026528\|Ga0209378_1033557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2671	Open in IMG/M
3300026536\|Ga0209058_1355020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	508	Open in IMG/M
3300026550\|Ga0209474_10078844	All Organisms → cellular organisms → Bacteria → Proteobacteria	2268	Open in IMG/M
3300027277\|Ga0209846_1046681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300027646\|Ga0209466_1004658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15	2871	Open in IMG/M
3300027682\|Ga0209971_1094975	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	728	Open in IMG/M
3300027846\|Ga0209180_10463782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	713	Open in IMG/M
3300027880\|Ga0209481_10562323	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300027909\|Ga0209382_11184084	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300028047\|Ga0209526_10205251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1363	Open in IMG/M
3300028673\|Ga0257175_1000480	All Organisms → cellular organisms → Bacteria → Proteobacteria	3456	Open in IMG/M
3300031679\|Ga0318561_10565668	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031748\|Ga0318492_10719334	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300031880\|Ga0318544_10135109	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300031890\|Ga0306925_10208237	Not Available	2110	Open in IMG/M
3300031946\|Ga0310910_11252298	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031954\|Ga0306926_12896298	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300032035\|Ga0310911_10831982	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300032064\|Ga0318510_10172288	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300032126\|Ga0307415_101153361	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300032205\|Ga0307472_102539657	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300032261\|Ga0306920_100839487	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300033805\|Ga0314864_0136164	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300033812\|Ga0364926_092711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.00%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.83%
Sediment	Environmental → Aquatic → Sediment	2.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Sand	Environmental → Terrestrial → Soil → Sand	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1001461923	3300000559	Soil	CPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLYWLNTSDIVAYYKAKAGLS*
Ga0062589_1007694811	3300004156	Soil	DKMIWSAGYDRGPGPVSTAGGTGSTYDLYWLKTSEIVAYYKAKAGLA*
Ga0062589_1022935032	3300004156	Soil	GDRMIWSTGLDRGPGPVSTAGGTGSTYDLFWLKTSDIVAYYKARAGLS*
Ga0066398_100814381	3300004268	Tropical Forest Soil	VDGACPMFTASGDKMIWSAGYDRGPGPVSTAGGTGGVYDLFWLNTSDIVAYYKAKAGLS*
Ga0062595_1023937512	3300004479	Soil	CPMFTAAGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDIVAYYKAKAGLS*
Ga0066677_103535863	3300005171	Soil	MFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDVVAYYKAKAGLA*
Ga0066685_105450323	3300005180	Soil	NIDGACPMFTADGDKMIWSSGLDRGPGPVSTSGGTGSHYDLFWLKTSDIVAYYRDKSGIR
Ga0066678_101406153	3300005181	Soil	DGACPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDIVAYYKAKAGLS*
Ga0066678_101798791	3300005181	Soil	DGACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLYWLNTSDVVAYYKAKAGLS*
Ga0066671_101445233	3300005184	Soil	MFTAGGDKMIWSAGYDRGPGLVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS*
Ga0066671_103547753	3300005184	Soil	NVDGACPMFTAAGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDVVAYYKAKAGLA
Ga0066675_113329501	3300005187	Soil	DKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIVAYYKAKAGLS*
Ga0070667_1012415303	3300005367	Switchgrass Rhizosphere	MIWSAGYDRGPGPVSTAGGTGSTYDLYWLKTSEIVAYYKAKAGLA*
Ga0066689_102847563	3300005447	Soil	GACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIVAYYKAKAGPS*
Ga0066689_105101153	3300005447	Soil	MFTADGDKMIWSSGLDRGPGPVSTSGGTGSHYDLFWLKTSDIVAYYRDKSGIR*
Ga0070699_1019641942	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GDKMIWSAGYDRGPGPVSTAGGTGSTYDLYWLKTSDIVAYYKAKAGLS*
Ga0066697_100291181	3300005540	Soil	PMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKTKAALA*
Ga0070696_1013635322	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	CPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDVVAYYKAKASRVSSTG*
Ga0066661_107657273	3300005554	Soil	FTAGGDKMIWSAGYDRGPGPVSTAAGTGSTYDLFWLKTSDIVAYYKAKAGLS*
Ga0066692_101796351	3300005555	Soil	VDGDKMIWSAGYDRGPGPVSAAGGTGGVYDLFWLKTSDVVAYYKAKARLAS*
Ga0068859_1007116421	3300005617	Switchgrass Rhizosphere	SNVDGACPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS*
Ga0066905_1002163893	3300005713	Tropical Forest Soil	GDKMIWSAGYDRGPGPVSAAGGTGGVYDIFWLKTSDVVAYYKAKARLSS*
Ga0066905_1008464931	3300005713	Tropical Forest Soil	GDKMIWSAGYDRGPGPVSAAGGTGGVYDLFWLKTSDVIAYYKTKARLAS*
Ga0066903_1016870713	3300005764	Tropical Forest Soil	QPNVDGACPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSHYDLFWLKTSDVVAYYKAKAGLS*
Ga0066903_1031200563	3300005764	Tropical Forest Soil	VDGACPMFTQAGDKMIWSAGYDRGPGAVSTAGGTGSTYDLFWLKTSDIVAYYKAKAGLS*
Ga0066903_1060464303	3300005764	Tropical Forest Soil	SGDKMIWSAGYDRGPGPISTATGVGGLYDLFWLNTSDIVAYYKAKAGLS*
Ga0066651_102960543	3300006031	Soil	CPMFTAGGDKMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDVVAYYKAKAGLS*
Ga0066696_109776652	3300006032	Soil	GDKMIWSAGYDRGPGPVSTSGGTGSIYDLYWLKTSDVVAYYKSKAGLA*
Ga0066696_109776662	3300006032	Soil	GDKMIWSAGYDRGPGPVSTSGGTGSIYDLYWLKTSDVVAYYKAKAGLA*
Ga0066652_1009733133	3300006046	Soil	FNQPNVDGACPMFTAGGDKMIWSAGYDRGPGAVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS*
Ga0066665_101120881	3300006796	Soil	MFTAGGDKMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDIVAYYKAKAGLS*
Ga0066665_111625421	3300006796	Soil	MFTAGGDKMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDVVAYYKAKAGLS*
Ga0066659_116087632	3300006797	Soil	FTTDGDKMFWSAGYDRGPGPVSAGGGTGGVYDLFWLKTSDVVAYYKAKARLGS*
Ga0075421_1004760401	3300006845	Populus Rhizosphere	MFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDIYWLNTSDVVAYYKAKAGLR*
Ga0075425_1002362963	3300006854	Populus Rhizosphere	GDKMIWSAGYDRGPGPVSAAGGTGGVYDLFWLKTSDVVAYYKAKARLAS*
Ga0075425_1027280052	3300006854	Populus Rhizosphere	GACPMFTTDGDKMIWSAGYDRGPGPVSAAGGTGSVYDLFWLKTSDIIAYYKAKAGLS*
Ga0075434_1011582903	3300006871	Populus Rhizosphere	GDKMIWSAGYDRGPGPISTSTGVGGLYDLFWLNTSDIVAYYKAKAGLS*
Ga0075419_110551992	3300006969	Populus Rhizosphere	ANIDGGCPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKAKAGLA*
Ga0075435_1010826463	3300007076	Populus Rhizosphere	DGDKMIWSAGYDRGPGPVSAAGGTGGVYDLFWLKTSDVIAYYKAKARLTS*
Ga0066710_1023641791	3300009012	Grasslands Soil	MIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIVAYYKAKAGLS
Ga0066710_1024723341	3300009012	Grasslands Soil	PMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKTKAALA
Ga0066710_1033940721	3300009012	Grasslands Soil	MFTAGGDKMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDVVAYYKAKAGLS
Ga0066710_1037311131	3300009012	Grasslands Soil	MFTAGGDKMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDIVAYYKAKAGLS
Ga0099828_117909301	3300009089	Vadose Zone Soil	CPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDIVAYYKAKASLS*
Ga0075418_109249643	3300009100	Populus Rhizosphere	MIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKAKAGLA*
Ga0066709_1027124171	3300009137	Grasslands Soil	PQFTADGDKMIWSSGQDRGPGPISGSDGSGSVYDLFWLKTSDVVAYYRAKARLT*
Ga0114129_114515281	3300009147	Populus Rhizosphere	PAIDGACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLYWLNTSDIVAYYKAKAGLS*
Ga0105071_10373951	3300009808	Groundwater Sand	IDGACPMFTAGGDKMVWSAGYDRGPGPVSTSGGTGSTYDLYWLNTSDIVAYYKAKAGLS*
Ga0105070_11360332	3300009815	Groundwater Sand	GGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIIAYYKAKAGLS*
Ga0105074_10690113	3300010029	Groundwater Sand	IDGACPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLA*
Ga0126380_118504311	3300010043	Tropical Forest Soil	MFTASGDKMIWSAGYDRGPGPISTSGGTGGLYDLFWLNTSDVVAYYKAQAGLS*
Ga0126384_115859522	3300010046	Tropical Forest Soil	NRPNVDGACPMFTAGGDKMIWSAGYDRGPGQVSTAGGTGSTYDLYWLKTSDIVAYYKAKAGLG*
Ga0126382_109607733	3300010047	Tropical Forest Soil	ACPMFTADGDKMIWSSGLDRGPGPVSSSAGTGSLYDLFWLKTSDMVAYYRAKAGIK*
Ga0126382_121586462	3300010047	Tropical Forest Soil	FNQANVDGACPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLNTSDIVAYYKAKAGLG*
Ga0134084_103653572	3300010322	Grasslands Soil	GACPMFTAAGDKMIWSAGYDRGPGPISTAAGTGSTYDLFWLKTSDVVAYYKSKAGLA*
Ga0134063_101552351	3300010335	Grasslands Soil	DKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKTKAALA*
Ga0134071_102733041	3300010336	Grasslands Soil	MIWSSGLDRGPGPVSTSGGTGSHYDLFWLKTSDIVAYYRDKSGIR*
Ga0126376_111992591	3300010359	Tropical Forest Soil	AGGDKMIWSAGYDHGPGPVSTAGGTGSTYDLFWLKTSDIVAYYKAKAGLS*
Ga0126376_116261391	3300010359	Tropical Forest Soil	PMFTASGDKMIWSAGYDRGPGPISTSGGTGGLYDLFWLNTSDVVAYYKAQAGLS*
Ga0126377_118069651	3300010362	Tropical Forest Soil	DGACPMFTAAGDRMIWSAGYDRGPGQVSTSGGTGSTYDLFWLKTSDIVAYYKAKAGLS*
Ga0126377_122845401	3300010362	Tropical Forest Soil	AGGDKMIWSAGYDRGPGPVSTAGGTGGTYDLFWLKTSDIVAYYKAKAGLS*
Ga0126379_101440573	3300010366	Tropical Forest Soil	IWSAGYDRGPGPVSTSGGTGSTYDLYWLNTSDLVAYYKAKAGLS*
Ga0126383_114762443	3300010398	Tropical Forest Soil	AGGDKMIWSAGYDRGPGPVSTAGGTGSHYDLFWLKTSDVVAYYKAKAGLS*
Ga0126383_115588411	3300010398	Tropical Forest Soil	PMFTASGDKMIWSAGYDRGPGPVSTSGGTGGVYDLFWLNTSDIVAYYKAKAGLS*
Ga0137393_101460003	3300011271	Vadose Zone Soil	FTAGGDKMIWSAGYDRGPGPVSSAGGTGSTYDLFWLKTSDIVAYYKAKAGLS*
Ga0137375_105890083	3300012360	Vadose Zone Soil	MFTAGGDKMIWSAGYDRGPGPVSTAGGTGGRYDLFWLKTSDIVAYYKANARLS*
Ga0137394_100522455	3300012922	Vadose Zone Soil	DGACPMFTAGGDKMIWSAGYDRGPGLVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS*
Ga0137394_102443233	3300012922	Vadose Zone Soil	DGACPMFTAGGDKMIWSAGYDRGPGLVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLG*
Ga0137416_103359963	3300012927	Vadose Zone Soil	FNQPNVDGACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLSTSDIVAYYKAKAGLS*
Ga0137404_107714723	3300012929	Vadose Zone Soil	PMFTAGGDKMIWSAGYDRGPGPVSSAGGTGSTYDLYWLNTSDIVACYKAKAGLS*
Ga0137407_122454222	3300012930	Vadose Zone Soil	GYDRGPGPVSTSGGTGSTYDLFWLNTSDIIAYYKAKAGLS*
Ga0137410_103141783	3300012944	Vadose Zone Soil	GDKMIWSAGYDRGPGLVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLG*
Ga0126375_111377352	3300012948	Tropical Forest Soil	MFTAGGDKMIWSAGYDRGPGQVSTAGGTGSTYDLYWLKTSDIVAYYKAKAGLG*
Ga0134087_101343301	3300012977	Grasslands Soil	AIDGACPMFTAGGDKMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDVVAYYKAKAGLS
Ga0137405_13443584	3300015053	Vadose Zone Soil	MFTAGGDKMIWSAGYDRGPASSPRRRHRLDLRLFWLKTSDVVAYYKAKAGLS*
Ga0134085_100315883	3300015359	Grasslands Soil	GDKMIWSAGYDRGPGPISTAAGTGSTYDLFWLKTSDVVAYYKSKAGLA*
Ga0182034_113187822	3300016371	Soil	PMFTDAGDKMIWSAAYDRGPGLIADADGNGSVCDLFWLKTSDVVAYYKAKAGLS
Ga0182034_117604751	3300016371	Soil	PMFTADGDKMIWSAGYDRGPGAISTAYGTGGVYDLFWLKTSDVIAYYKAKARLGS
Ga0182037_120302541	3300016404	Soil	AGDKMIWSAAYDRGPGLIADADGNGSVCDLFWLKTSDVVAYYKAKAGLR
Ga0182037_120914992	3300016404	Soil	MFTADGDKMIWSAGYDRGPGPIADADGGGSVYDLFWLKTSDVVAYYKAKAGLR
Ga0134083_103338093	3300017659	Grasslands Soil	MFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIVAYYKAKAGLS
Ga0134083_104942831	3300017659	Grasslands Soil	PMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLYWLNTSDVVAYYKAKAGLS
Ga0184623_102094033	3300018056	Groundwater Sediment	IWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIIAYYKAKAGLS
Ga0184637_102700363	3300018063	Groundwater Sediment	GDKMIWSSGLDRGPGPVSTSGGTGSLYDLFWLKTSDVVAYYKAKAGLS
Ga0184637_105308361	3300018063	Groundwater Sediment	NPAIDGACPMFTARGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLNTSDIVAYYKAKAGLS
Ga0066662_102792413	3300018468	Grasslands Soil	GACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIVAYYKAKAGLS
Ga0066662_103015553	3300018468	Grasslands Soil	IDGACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLYWLNTSDVVAYYKAKAGLS
Ga0207658_103862331	3300025986	Switchgrass Rhizosphere	MIWSAGYDRGPGPVSTAGGTGSTYDLYWLKTSEIVAYYKAKAGLA
Ga0209235_10899263	3300026296	Grasslands Soil	PMFTASGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKAKAGLS
Ga0209055_11237023	3300026309	Soil	DGACPMFTAGGDKMIWSAGYDRGPGAVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS
Ga0209801_10364004	3300026326	Soil	MFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKTKAALA
Ga0209803_13165811	3300026332	Soil	PAIDGACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDIVAYYKAKAGP
Ga0209804_11886421	3300026335	Soil	TAGGDKMIWSAGYDRGPGAVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS
Ga0257178_10311001	3300026446	Soil	MIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKAKASLS
Ga0209690_10724983	3300026524	Soil	AGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLNTSDVVAYYKAKAGIS
Ga0209690_11816701	3300026524	Soil	QPNVDGACPMFTAGGDRMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS
Ga0209378_10335574	3300026528	Soil	PMFTAGGDKMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDVVAYYKAKAGLS
Ga0209058_13550202	3300026536	Soil	KMIWSAGYDRGPGPVSSSGGTGSTYDLFWLNTSDVVAYYKAKAGLS
Ga0209474_100788441	3300026550	Soil	TAGGDKMIWSAGYDRGPGPVSTAGGTGGRYDLFWLKTSDIVAYYKANARLS
Ga0209846_10466811	3300027277	Groundwater Sand	ADGDKMIWSSGLDRGPGAISTSNGTGSLYDLFWLKTSDMVAYYRAKAGLR
Ga0209466_10046581	3300027646	Tropical Forest Soil	VDGACPMFTIDGDKMLWSAGYDRGPGPVSAAGGTGGVYDLFWLKTSDVVAYYKAKAGLS
Ga0209971_10949751	3300027682	Arabidopsis Thaliana Rhizosphere	MFTAGGDRMIWSAGYDRGPAPVSSAGGTGSTYDLYWLSTSDIVAFYKAKAGIS
Ga0209180_104637821	3300027846	Vadose Zone Soil	GACPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKAKAGLS
Ga0209481_105623232	3300027880	Populus Rhizosphere	QANIDGGCPMFTAGGDKMIWSAGYDRGPGPVSTSGGTGSTYDLFWLKTSDIVAYYKAKAGLA
Ga0209382_111840841	3300027909	Populus Rhizosphere	ACPMFTQAGDKMIWSAGYDRGPGAVSTAGGTGSTYDLFWLKTSDIVAYYKAKAGLS
Ga0209526_102052513	3300028047	Forest Soil	VDGACPMFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLS
Ga0257175_10004805	3300028673	Soil	DKMIWSAGYDRGPGPVSSAGGTGSTYDLFWLKTSDIVAYYKAKAGLS
Ga0318561_105656681	3300031679	Soil	APFNQPGVDGACPMFTADGDKMIWSAGYDRGPGPISDAFGSGSVYDLFWLKTSDIVAYYKAKAGLS
Ga0318492_107193341	3300031748	Soil	TADGDKMIWSAGYDRGPGAISTAYGTGGVYDLFWLKTSDVIAYYKAKARLGS
Ga0318544_101351091	3300031880	Soil	MFTADGDKMIWSAGYDRGPGAISTAYGTGGVYDLFWLKTSDVVAYYKAKAGLS
Ga0306925_102082371	3300031890	Soil	FTVDGDKMIWSAGYDRGPGPVSDAHGGSVYDLFWLKTSDVVAYYKAKAGRS
Ga0310910_112522981	3300031946	Soil	PFNQPGVDGACPMFTADGDKMIWSAGYDRGPGPISDAFGSGSVYDLFWLKTSDIVAYYKAKAGLS
Ga0306926_128962982	3300031954	Soil	DKMIWSAGYDRGPGPVADADGNGSVYDLFWLKTSDVVAYYKAKAGLS
Ga0310911_108319821	3300032035	Soil	VVGDKMIWSAGYDRGPGPVADADGNGSVYDLFWLKTSDVVAYYKAKAGLS
Ga0318510_101722881	3300032064	Soil	ADGDKMIWSAGYDRGPGAISTAYGTGGVYDLFWLKTSDVIAYYKAKARLGS
Ga0307415_1011533613	3300032126	Rhizosphere	NNTAIDGACPMFTAGGDKMIWSAGYDRGPGPVSTNRGTGSTYDMYWLNTRDIIAYYKAKAGLS
Ga0307472_1025396571	3300032205	Hardwood Forest Soil	PMFTTAGDKMIWSAGYDRGPGPVSAAGGTGSVYDLFWLKTSDLVAYYKAKAGLS
Ga0306920_1008394874	3300032261	Soil	MFTADGDKMIWSAGYDRGPGPISTAYGTGGVYDLFWLKTSDVVAYYKAKAGLR
Ga0314864_0136164_22_183	3300033805	Peatland	MFTAGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLKTSDVVAYYKAKAGLG
Ga0364926_092711_19_180	3300033812	Sediment	MFSHGGDKMIWSAGYDRGPGPVSTAGGTGSTYDLFWLNTSDIVAYYKAKAGLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073328

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences