Metagenome / Metatranscriptome Family F073315

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073315
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	63 residues
Representative Sequence	VREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKKLVDVTNDEIKDMCENQLWEDTVRDMGL
Number of Associated Samples	100
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.50 %
% of genes near scaffold ends (potentially truncated)	64.17 %
% of genes from short scaffolds (< 2000 bps)	88.33 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (24.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.26% β-sheet: 0.00% Coil/Unstructured: 45.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF03050	DDE_Tnp_IS66	7.50
PF00239	Resolvase	6.67
PF01609	DDE_Tnp_1	4.17
PF08973	TM1506	3.33
PF13005	zf-IS66	0.83
PF13565	HTH_32	0.83
PF00196	GerE	0.83
PF13613	HTH_Tnp_4	0.83
PF00296	Bac_luciferase	0.83
PF09912	DUF2141	0.83
PF13343	SBP_bac_6	0.83
PF06724	DUF1206	0.83
PF05717	TnpB_IS66	0.83
PF03992	ABM	0.83
PF13744	HTH_37	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3436	Transposase	Mobilome: prophages, transposons [X]	8.33
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	6.67
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	6.67
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	4.17
COG3293	Transposase	Mobilome: prophages, transposons [X]	4.17
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	4.17
COG5421	Transposase	Mobilome: prophages, transposons [X]	4.17
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	4.17
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	4.17
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
All Organisms	root	All Organisms	35.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
cellular organisms	root	All Organisms → cellular organisms	35.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.83 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	4.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.33 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	4.17 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.67 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.17 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.33 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.67 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1.67 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	1.67 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.67 %
unclassified Patescibacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.83 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.67 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1.67 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.83 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.83 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.83 %
Candidatus Marithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Candidatus Marithrix	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.67 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1.67 %
unclassified Candidatus Marithrix	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Candidatus Marithrix → unclassified Candidatus Marithrix	0.83 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.83 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.83 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.17 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.67 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1.67 %
Candidatus Marithrix sp. Canyon 246	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Candidatus Marithrix → unclassified Candidatus Marithrix → Candidatus Marithrix sp. Canyon 246	0.83 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.83 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.83 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100500630	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300002908\|JGI25382J43887_10047981	Not Available	2321	Open in IMG/M
3300002908\|JGI25382J43887_10109275	All Organisms → cellular organisms → Bacteria → Proteobacteria	1453	Open in IMG/M
3300003203\|JGI25406J46586_10227311	Not Available	546	Open in IMG/M
3300004633\|Ga0066395_10015610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2921	Open in IMG/M
3300005166\|Ga0066674_10215453	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	914	Open in IMG/M
3300005176\|Ga0066679_10382686	Not Available	921	Open in IMG/M
3300005186\|Ga0066676_10262619	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300005186\|Ga0066676_11096795	Not Available	525	Open in IMG/M
3300005187\|Ga0066675_10680349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	773	Open in IMG/M
3300005187\|Ga0066675_11071447	Not Available	603	Open in IMG/M
3300005332\|Ga0066388_102899927	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300005332\|Ga0066388_103956149	Not Available	756	Open in IMG/M
3300005450\|Ga0066682_10814920	Not Available	563	Open in IMG/M
3300005536\|Ga0070697_101604533	Not Available	582	Open in IMG/M
3300005540\|Ga0066697_10711744	Not Available	549	Open in IMG/M
3300005552\|Ga0066701_10797606	Not Available	563	Open in IMG/M
3300005713\|Ga0066905_100594020	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005713\|Ga0066905_101031607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300005764\|Ga0066903_100891998	Not Available	1607	Open in IMG/M
3300005888\|Ga0075289_1090290	Not Available	513	Open in IMG/M
3300005937\|Ga0081455_10005617	All Organisms → cellular organisms → Bacteria	13701	Open in IMG/M
3300005985\|Ga0081539_10178082	Not Available	1000	Open in IMG/M
3300006058\|Ga0075432_10036950	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300006796\|Ga0066665_11120988	Not Available	599	Open in IMG/M
3300006796\|Ga0066665_11371127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	546	Open in IMG/M
3300006844\|Ga0075428_101255892	Not Available	780	Open in IMG/M
3300006847\|Ga0075431_101571773	Not Available	616	Open in IMG/M
3300006852\|Ga0075433_11732458	Not Available	538	Open in IMG/M
3300006969\|Ga0075419_10172817	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300007265\|Ga0099794_10528951	Not Available	622	Open in IMG/M
3300007777\|Ga0105711_1143726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Candidatus Marithrix → unclassified Candidatus Marithrix → Candidatus Marithrix sp. Canyon 246	753	Open in IMG/M
3300009012\|Ga0066710_100818579	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300009038\|Ga0099829_11520917	Not Available	553	Open in IMG/M
3300009088\|Ga0099830_10811914	Not Available	772	Open in IMG/M
3300009100\|Ga0075418_11551269	Not Available	719	Open in IMG/M
3300009162\|Ga0075423_10987490	Not Available	894	Open in IMG/M
3300009162\|Ga0075423_12990475	Not Available	518	Open in IMG/M
3300009162\|Ga0075423_13062904	Not Available	512	Open in IMG/M
3300009553\|Ga0105249_10372419	Not Available	1452	Open in IMG/M
3300009792\|Ga0126374_10026840	All Organisms → cellular organisms → Bacteria	2631	Open in IMG/M
3300010039\|Ga0126309_10523887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
3300010043\|Ga0126380_10677824	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300010046\|Ga0126384_12487236	Not Available	502	Open in IMG/M
3300010047\|Ga0126382_10015417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3821	Open in IMG/M
3300010321\|Ga0134067_10244668	Not Available	674	Open in IMG/M
3300010360\|Ga0126372_13311731	Not Available	501	Open in IMG/M
3300010360\|Ga0126372_13312923	Not Available	501	Open in IMG/M
3300010361\|Ga0126378_11421412	Not Available	786	Open in IMG/M
3300010361\|Ga0126378_11837852	Not Available	689	Open in IMG/M
3300010362\|Ga0126377_11901412	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010362\|Ga0126377_13534992	Not Available	505	Open in IMG/M
3300010398\|Ga0126383_12329424	Not Available	621	Open in IMG/M
3300010398\|Ga0126383_12362675	Not Available	617	Open in IMG/M
3300011269\|Ga0137392_10780890	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300011270\|Ga0137391_10484946	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1048	Open in IMG/M
3300011270\|Ga0137391_11007033	Not Available	678	Open in IMG/M
3300012189\|Ga0137388_10456687	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300012199\|Ga0137383_10423482	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	975	Open in IMG/M
3300012199\|Ga0137383_10771893	Not Available	702	Open in IMG/M
3300012201\|Ga0137365_10446165	Not Available	953	Open in IMG/M
3300012205\|Ga0137362_10263411	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300012209\|Ga0137379_10420296	Not Available	1246	Open in IMG/M
3300012211\|Ga0137377_11117884	Not Available	718	Open in IMG/M
3300012350\|Ga0137372_10905814	Not Available	624	Open in IMG/M
3300012357\|Ga0137384_10037202	All Organisms → cellular organisms → Bacteria	4011	Open in IMG/M
3300012359\|Ga0137385_11224445	Not Available	613	Open in IMG/M
3300012361\|Ga0137360_11223788	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	650	Open in IMG/M
3300012362\|Ga0137361_10273294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1543	Open in IMG/M
3300012362\|Ga0137361_10857028	Not Available	825	Open in IMG/M
3300012476\|Ga0157344_1020143	Not Available	569	Open in IMG/M
3300012918\|Ga0137396_10676455	Not Available	762	Open in IMG/M
3300012918\|Ga0137396_10830671	Not Available	679	Open in IMG/M
3300012929\|Ga0137404_11382892	Not Available	650	Open in IMG/M
3300012948\|Ga0126375_10019045	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300012948\|Ga0126375_10808161	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012958\|Ga0164299_11323396	Not Available	552	Open in IMG/M
3300013306\|Ga0163162_12108025	Not Available	647	Open in IMG/M
3300014150\|Ga0134081_10413604	Not Available	508	Open in IMG/M
3300014154\|Ga0134075_10406756	Not Available	601	Open in IMG/M
3300014302\|Ga0075310_1098757	Not Available	618	Open in IMG/M
3300015264\|Ga0137403_11234296	Not Available	593	Open in IMG/M
3300015372\|Ga0132256_100414805	Not Available	1450	Open in IMG/M
3300016270\|Ga0182036_10805256	Not Available	766	Open in IMG/M
3300016270\|Ga0182036_11281143	Not Available	611	Open in IMG/M
3300016319\|Ga0182033_11062802	Not Available	722	Open in IMG/M
3300016422\|Ga0182039_10073700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2426	Open in IMG/M
3300017792\|Ga0163161_10470779	Not Available	1019	Open in IMG/M
3300018074\|Ga0184640_10127019	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300018076\|Ga0184609_10350071	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300018077\|Ga0184633_10530587	Not Available	566	Open in IMG/M
3300020067\|Ga0180109_1171197	Not Available	682	Open in IMG/M
3300021560\|Ga0126371_11433649	Not Available	821	Open in IMG/M
3300021560\|Ga0126371_13044360	Not Available	567	Open in IMG/M
3300022209\|Ga0224497_10421490	Not Available	503	Open in IMG/M
3300025922\|Ga0207646_10420718	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300026296\|Ga0209235_1009721	All Organisms → cellular organisms → Bacteria	5337	Open in IMG/M
3300026297\|Ga0209237_1040165	Not Available	2454	Open in IMG/M
3300027636\|Ga0214469_1125132	Not Available	737	Open in IMG/M
3300027654\|Ga0209799_1006983	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300027748\|Ga0209689_1160932	Not Available	1055	Open in IMG/M
3300027787\|Ga0209074_10312930	Not Available	632	Open in IMG/M
3300027874\|Ga0209465_10025978	Not Available	2731	Open in IMG/M
3300027874\|Ga0209465_10044531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2114	Open in IMG/M
3300027882\|Ga0209590_10553452	Not Available	741	Open in IMG/M
3300027909\|Ga0209382_10242725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	2049	Open in IMG/M
3300027957\|Ga0209857_1071608	Not Available	593	Open in IMG/M
3300031229\|Ga0299913_10560717	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300031744\|Ga0306918_10841688	Not Available	716	Open in IMG/M
3300031748\|Ga0318492_10616525	Not Available	579	Open in IMG/M
3300031793\|Ga0318548_10104769	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300031879\|Ga0306919_10941714	Not Available	661	Open in IMG/M
3300031910\|Ga0306923_10428239	Not Available	1503	Open in IMG/M
3300031945\|Ga0310913_10206153	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300031954\|Ga0306926_10795751	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1140	Open in IMG/M
3300032063\|Ga0318504_10438684	Not Available	624	Open in IMG/M
3300032076\|Ga0306924_11427219	Not Available	737	Open in IMG/M
3300032261\|Ga0306920_103360047	Not Available	595	Open in IMG/M
3300033289\|Ga0310914_10257236	Not Available	1569	Open in IMG/M
3300034681\|Ga0370546_031575	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.00%
Host-Associated	Host-Associated	15.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Plants	Host-Associated → Plants	15.00%
Aquatic	Environmental → Aquatic	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.00%
Sediment	Environmental → Aquatic → Sediment	2.50%
Marine	Environmental → Aquatic → Marine	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.33%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.83%
Sediment	Environmental → Aquatic → Marine → Sediment	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.83%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.50%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Diffuse Vent Fluid, Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents	0.83%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007777	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS918_NRZ_DNA CLC_assembly	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022209	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1005006302	3300000364	Soil	TCPRVIRKLLRWMREKKLIDITNDEIQGMRENQLWEDTVKDLGL*
JGI25382J43887_100479811	3300002908	Grasslands Soil	MAGNEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL*
JGI25382J43887_101092752	3300002908	Grasslands Soil	LKTCPRVIRKLLRWMREKELVAFTNDEMKDMCENQLWEDTVRDLGL*
JGI25406J46586_102273111	3300003203	Tabebuia Heterophylla Rhizosphere	DYFVPRKVMAGNEFILKTCPRVIRKFLRWMREKQLVDFTNDEIQSMCENQLWEETVRDLGL*
Ga0066395_100156102	3300004633	Tropical Forest Soil	VCPRVIRKFLRWMREKKLVDFTNDEIKDMCENQLWEDTVRDMGL*
Ga0066674_102154532	3300005166	Soil	DYFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKKLVDLTNDEMKDMCENQLWEDTLRDMGF*
Ga0066679_103826863	3300005176	Soil	LDYFVPRKVMAGNAFILKTCPRVIRKLLRWMREKKLIAVTNDEIQGMCENQLWEDTVKDLGL*
Ga0066676_102626192	3300005186	Soil	MAGNDFILKTCPRVIRKLLRWMREKELVAFTNDEMKDMCENQLWEDTVRDLGL*
Ga0066676_110967951	3300005186	Soil	LYDHTHIESNVREFLDYFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKKLVDLTNDEMKDMCENQLWEDTLRDMGF*
Ga0066675_106803492	3300005187	Soil	LDYFVPRKVMAGNEFILKTCPRVMRKLLRWMREKKLVDLTNDEMKGMCENQLWEDTVRDMEL*
Ga0066675_110714471	3300005187	Soil	VREFLDYFVPHKVMAGNEFILKTCPRVIRKLLRWMREKKLIAVTNDELKDMCENQLWEDTVKDLRL*
Ga0066388_1028999272	3300005332	Tropical Forest Soil	HTHIADNVREFLDYFVPRKVMAGNEFILKTCPRVIRKFLRWMREKQLVDFTNDEIQSMCENQLWEETVRDLGL*
Ga0066388_1039561491	3300005332	Tropical Forest Soil	VREFLDYFVPRKVIAGNEFILQTCPRVIRKFLRWMREKQLVDCTNEEIKDMCENQLWEDT
Ga0066682_108149202	3300005450	Soil	RKVMAGNEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL*
Ga0070697_1016045331	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NVREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKKLVELTNDEIQDMCEHQLWEDTVRDLGF*
Ga0066697_107117441	3300005540	Soil	VREFLDYCVPRKVMAGNDFILKTCPRVIRKLLRWMREKELVAFTNDEMKGMCENQLWEDTVRDLGL*
Ga0066701_107976061	3300005552	Soil	VREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKELVAFTNDEMKDMCENQLWEDTVRDLGL*
Ga0066905_1005940201	3300005713	Tropical Forest Soil	VRELLDYFVPRKVMAGNEFILKTCPRVIRRLLRWMRNKQLVDLTNDDIKEMCENQLWEDTVREMGF*
Ga0066905_1010316072	3300005713	Tropical Forest Soil	RSFLELYDHTHIESNVREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKKLVELTNDEIKDMCENQLWEDTVRDLGF*
Ga0066903_1008919982	3300005764	Tropical Forest Soil	MDLYDHTHIESNVREFLDYFVPRKVMAGKEFILKTCPRVLRSLLRWMRNKQLVDLTTDDMKEMCENQ*
Ga0075289_10902903	3300005888	Rice Paddy Soil	VREFLDYFVPRKVMAGTEFILKTCPRVIRKLLRWMREKKLVALTNEELKEMCENQLWEDTVRDM
Ga0081455_100056176	3300005937	Tabebuia Heterophylla Rhizosphere	MAGNEFILKTCPRVIRKLLRWMREKKLGEFTNADIKDMCENQLWEDTVRELGL*
Ga0081539_101780821	3300005985	Tabebuia Heterophylla Rhizosphere	VREFLDYFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKQLVDLTNDDIKEMCENQLWEDTVREMGF*
Ga0075432_100369503	3300006058	Populus Rhizosphere	GNEFILKTCPRVIRKLLRWMREKELVALTNDEMKDMCENQLWEDTVRDMGL*
Ga0066665_111209881	3300006796	Soil	MAGNEFILKTCPRVIRKLLRWMREKKLIDLTNAEMKDMCENQLWEDTVKDLGL*
Ga0066665_113711271	3300006796	Soil	SFIDLYDHTHIEENVREFLDYFVPRKVMAGNEFILKTCPRVMRQLLKWMKNKKLVDLTNDDIKEMCENQLWEDTMRDMGF*
Ga0075428_1012558922	3300006844	Populus Rhizosphere	VREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKKLVDVTNDEIKDMCENQLWEDTVRDMGL*
Ga0075431_1015717731	3300006847	Populus Rhizosphere	PRKVMAGNEFILKVCPRVIRKFLRWMRAQKLVDFTNDEIKDMCENQLWEDTVRDLGL*
Ga0075433_117324582	3300006852	Populus Rhizosphere	LDYFVPRKVIAGDDFILKTCPRVIRKLLKWMRAKHLVELTNEDIQAMCENQLWEDTMRDLGF*
Ga0075419_101728172	3300006969	Populus Rhizosphere	VREFLDYFVPRKVRAGHEFILKTCPRVIRKFLRWMREKQLVDLTNDEIQSMCENQLWEETVRDLGL*
Ga0099794_105289511	3300007265	Vadose Zone Soil	KKQEKGFIDLYDHTHIESNMREFLDYFVPRKVMAGNEFILKTCPRVMRSLLRWMRNKKLVDLTNDEMKDMCENQLWEDTLRDMGF*
Ga0105711_11437263	3300007777	Diffuse Vent Fluid, Hydrothermal Vents	GQGFILKTCPRVIRTLLKWMREKKLCDLTNDEIKERCENQLWEDSLKDMGF*
Ga0066710_1008185791	3300009012	Grasslands Soil	HTHIAENVREFLDYFVPRKVMAGNEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0099829_115209171	3300009038	Vadose Zone Soil	KTCPRVIRKLLKWMREKHLVDLTNDDIQAMCENQLWEDTMRDMGF*
Ga0099830_108119141	3300009088	Vadose Zone Soil	GDDFILKTCPRVIRKLLKWMREKHLVDLTNDDIQAMCENQLWEDTMRDMGF*
Ga0075418_115512691	3300009100	Populus Rhizosphere	NEFILKTCPRVIRKFLRWMREKKLVDLTNDEIQGMCENQLWEDTVRDLGL*
Ga0075423_109874902	3300009162	Populus Rhizosphere	MAGNEFILKTCPRVIRKFLRWMREKKLVDLTNDEIQGMCENQLWEDTVRDLGL*
Ga0075423_129904751	3300009162	Populus Rhizosphere	VREFLDYFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKKLVDLTNDEIKDMCENRLWEDTVRDMGF*
Ga0075423_130629041	3300009162	Populus Rhizosphere	EFILKTCPRVMRKLLTWMSKKKLVDLTNSDIKEMCENQLWEDTMRDMGF*
Ga0105249_103724191	3300009553	Switchgrass Rhizosphere	EFLDYFVPRKVIAGNEFILKTCPRVIRSLLRWMRNKKLVDLTNDEIKDMCENQLWEDTVRDMGF*
Ga0126374_100268404	3300009792	Tropical Forest Soil	MAGNEFILKTCPRVIRKFLRWMREKKLVDLTNDEMKDMCENQLWEDTVRDMGL*
Ga0126309_105238871	3300010039	Serpentine Soil	MQKKSFIDLYDHTHIEDNVGDFLDYFVPRKVMSGDEFILKTCPRVIRKLLKWMRDKKLVDLTNDDIKAMCENQLWEDTMREMGF*
Ga0126380_106778241	3300010043	Tropical Forest Soil	RKVIAGNDFILKTCPRVIRKLLKWMRERHLVELTNEDIQEMCENQLWEDTMRDMGF*
Ga0126384_124872361	3300010046	Tropical Forest Soil	LYDHTHIADNVREFLDYFVPRKVLAGNAFILKTCPRVIRKLLRWMRDKKLVDFTNDEIQGMCENQLWEDTVRDLGL*
Ga0126382_100154173	3300010047	Tropical Forest Soil	MAGNEFILKTCPRVIRKFLRWMREKQLVDFTNDEIQSMCENQLWEETVRDLGL*
Ga0134067_102446682	3300010321	Grasslands Soil	MAGNAFILKTCPRVIRKLLRWMREKKLIAVTNDEIQGMCENQLWEDTVKDLRL*
Ga0126372_133117311	3300010360	Tropical Forest Soil	MESEFFDYFVPRKVMAGNAFILKTCPRVIRKLLRWMREKKLGEFTNADMKDMCENQLWEDTVRELGR*
Ga0126372_133129231	3300010360	Tropical Forest Soil	IADNVREFLDYFVPRKVMAGNEFILKTCPRVIRQLLRWMREKKLVDFTNDEIKDMCENQLWEDTVRDLGL*
Ga0126378_114214121	3300010361	Tropical Forest Soil	MAGNEFILKTCPRVIRKFLRWMREKKLVDFTNDEMKDMCENQLWEETVRDMG
Ga0126378_118378522	3300010361	Tropical Forest Soil	LDYFVPRKVIAGNGFILKTCPRVIRKFLRWMREKKLVDLTNDEIQGMCENQLWEDTVRDLGL*
Ga0126377_119014122	3300010362	Tropical Forest Soil	FLDYFVPRKVIAGNDFILKTCPRVIRKLLKWMREKHLVELTNEDIQEMCENQLWEDTMRDMGF*
Ga0126377_135349921	3300010362	Tropical Forest Soil	IAENVSEFLDYFVPRKVMAGNAFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGLQDAWVAL*
Ga0126383_123294241	3300010398	Tropical Forest Soil	RFVDLYDHTHIADNVREFLDDFVPRKVMAGPEFILKTCPRVIRKFLRWMRAKKLVDLTNDEIQDMCENQLWEDTVRDLGL*
Ga0126383_123626751	3300010398	Tropical Forest Soil	AQKKGKSFIDLYDHTHIEENVGKFLDYFVPRKVVAGDDFILKTCPRVIRKLLKWMREKHLVDVTNEDIQAMCENQLWEDTMRDMGF*
Ga0137392_107808901	3300011269	Vadose Zone Soil	MAGDDFILKTCPRVIRKLLKWMREKHLVDLTNDDIQAMCENQLWEDTMRDMGF*
Ga0137391_104849462	3300011270	Vadose Zone Soil	VMRKLLRWMREKKLVDFTNDEMKGMCENQLWEDTVRDMELSGALFAL*
Ga0137391_110070331	3300011270	Vadose Zone Soil	NVREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKELVAFTNDEMKDMCENQLWEDTVRDMGL*
Ga0137388_104566872	3300012189	Vadose Zone Soil	MAGDDFILKTCPRVIRRLLQWMREKHLVDVTNDDIQAMCENQLWEDTMRDMGF*
Ga0137383_104234822	3300012199	Vadose Zone Soil	YDHTHIEENVGEFLDYFVPRKVMAGDEFILKTCPRVMRKLLKWMREKHLVELTNDDIQAMCENQLWEDTMRDMGF*
Ga0137383_107718932	3300012199	Vadose Zone Soil	MAGNEFILKTCPRVIRKLLRWMREKKLVDVTNDEIKDMCENQLWEDTVKDLGL*
Ga0137365_104461652	3300012201	Vadose Zone Soil	MANGERMAGNEFILKTCPRVIRKLLRWMREKKLVDVTNDEIKDMCENQLWEDTVKDLGL*
Ga0137362_102634112	3300012205	Vadose Zone Soil	VREFLDYFVPRKVMAGNKFILKTCPRVIRKFLRWMREKKLVDCTNDEIQAMCENQLWEDTVRDMGL*
Ga0137379_104202964	3300012209	Vadose Zone Soil	MAGNEFILKTCPRVIRKLLRWMREKKLVDVTNDEIKNMCENQLWE
Ga0137377_111178842	3300012211	Vadose Zone Soil	DYFVPRKVMAGDEFILKTCPRVMRKLLKWMREKHLVELTNDDIQAMCENQLWEDTMRDMGF*
Ga0137372_109058141	3300012350	Vadose Zone Soil	REFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKKLVDVTNDEIKDMCENQLWEDTVKDLGL*
Ga0137384_100372024	3300012357	Vadose Zone Soil	VREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKKLVDVTNDEIKDMCENQLWEDTVKDLGL*
Ga0137385_112244452	3300012359	Vadose Zone Soil	MILKTCPRVIRKLLGWRIEKKLVDLTNDEIKEMCENQLWEDTVRDLGF*
Ga0137360_112237882	3300012361	Vadose Zone Soil	VREFLDYFVPRKVMAGNEFILKTCPRVMRSLLRWMRNKKLVDLTNDEMKDMCENQLWEDTLRDRGF*
Ga0137361_102732941	3300012362	Vadose Zone Soil	MSSFNRKKVYGGEFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKELVALTNEEMKDMCENQLWEDTVRDMGL*
Ga0137361_108570283	3300012362	Vadose Zone Soil	YDHTHIEENVGEFLDYFVPRKVMAGDGFILKTCPRVMRKLLKWMREKHLVDLTNEDIQAMCENQLWEDTMRDMGF*
Ga0157344_10201431	3300012476	Arabidopsis Rhizosphere	IELYDHTHIESNVREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKQLVELTNDEIKDMCENQLWEDTVRDLGF*
Ga0137396_106764552	3300012918	Vadose Zone Soil	LDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKKLVELTNDEIKDMCENQLWEDTVRDLGF*
Ga0137396_108306711	3300012918	Vadose Zone Soil	DHTHIESNVREFLDYFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKKLVDLTNDEMKDMCENQLWEDTLRDMGF*
Ga0137404_113828921	3300012929	Vadose Zone Soil	DHTHIEENVREFLDYFVPRKVMAGNEFILKTCPRVMRKLLRWMREKKLVDLTNDEMKGMCENQLWEDTVRDMEL*
Ga0126375_100190452	3300012948	Tropical Forest Soil	MAGNEFILKTCPRVIRKFLRWMREKQLVDFTHDEIQSMCENQLWEETVRDLGW*
Ga0126375_108081611	3300012948	Tropical Forest Soil	IAENVGEFLDYFVPRKVIAGNDFILKTCPRVIRKLLKWMREKHLVELTNEDIQEMCENQLWEDTVRDMGF*
Ga0164299_113233961	3300012958	Soil	QGKSFIDLYDHTHIESNVREFLDYFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKQLVDLTNDDIKEMCENQLWEDTVREMGF*
Ga0163162_121080251	3300013306	Switchgrass Rhizosphere	FILKTCPRVIRSLLRWMRNKKLVDLTNDEMKDMCENQLWEDTVRDMGF*
Ga0134081_104136042	3300014150	Grasslands Soil	DYFVPRKVMAGNEFILKTCPRVMRKLLRWMREKKLVDLTNDEMKGMCENQLWEDTVRDMEL*
Ga0134075_104067561	3300014154	Grasslands Soil	VREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKELVACTKDEMKDLCENQLWEDTVRDLGL*
Ga0075310_10987571	3300014302	Natural And Restored Wetlands	DLYDHTHIESNVREFLDYFVPRKVMAGNEFILKTCPRVIRGLLRWMRNKQLVDLTNEDIKDMCENQLWEDTLREMGF*
Ga0137403_112342961	3300015264	Vadose Zone Soil	EFILKTCPRVMRKLLRWMREKKLVDLTNDEMKGMCENQLWEDTVRDMEL*
Ga0132256_1004148051	3300015372	Arabidopsis Rhizosphere	NEFLLKTCPRVIRKLLRWMREKKLVELTNDEIKDMCENQLWEDTVRDLGF*
Ga0182036_108052561	3300016270	Soil	EAAQKKGQRFIDLYDHTHIEANVSEFLDYFVPRKVLAGNAFILQTCPRVIRKFLRWMREKKLVDFTNDEIKDVCENQLWEDTVRDLGL
Ga0182036_112811431	3300016270	Soil	VPRKVIAGDDFILKTCPRVIRKLLKWMREKHLVDVTNEDIQAMCENQLWEDTMRDMGF
Ga0182033_110628021	3300016319	Soil	DQTHIAENVREFLDYFVPRKVMAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0182039_100737002	3300016422	Soil	MAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0163161_104707792	3300017792	Switchgrass Rhizosphere	YDHTHIEENVREFLDYFVPRKVMAGNEFILKTCPRVMRQLLKWMKNKKLVDLTNDDIKEMCENQLWEDTRRDMGF
Ga0184640_101270193	3300018074	Groundwater Sediment	NVGEFLDYFVPRKVMAGEEFILKTCPRVIRKLLRWMREKKLVELTNDEMKAMCENQLWKDTVREMGL
Ga0184609_103500711	3300018076	Groundwater Sediment	MAGDDFILKTCPRVMRKLLRWMREKHLVDLTNEDIQAMCENQLWEDTMRDMGF
Ga0184633_105305872	3300018077	Groundwater Sediment	MAGEEFILKTCPRVIRKLLRWMREKKLVELTNDEMKAMCENQLWKDTVREMGL
Ga0180109_11711972	3300020067	Groundwater Sediment	FLDYFVPRKVMAGNDFILKTCPRVMRQLLKWMRERHLVDLTNDDIKEMCENQLWEDTMRDMGL
Ga0126371_114336492	3300021560	Tropical Forest Soil	MAGNEFILKVCPRVIRKFLRWMREKTLVDFTNDEIKDMCENQLWEDTVRDLGV
Ga0126371_130443602	3300021560	Tropical Forest Soil	HTHIADNVSEFLDYFVPRKVVAGNEFILKTCPRVIRKLLRWMREKKLIDVTNDEIQGMCENQLWEDTVKDLGL
Ga0224497_104214901	3300022209	Sediment	REFLDYFVPRKVMAGDAFILETCPRVIRQLLKWMRTKKLVNLTNDDIKEMCENQLWEDTMRDLGF
Ga0207646_104207183	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	NVREFLDYFVPRKVMAGNEFILKTCPRVIRKFLRWMREKKLVDLTNDEIQGMCENQLWEDTVRDMGL
Ga0209235_10097217	3300026296	Grasslands Soil	MAGNEFILKTCPRVIRKLLRWMREKELVAFTNDEMKDMCENQLWEDTVRDLGL
Ga0209237_10401652	3300026297	Grasslands Soil	MAGNEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0214469_11251322	3300027636	Soil	HTHIEDNVGEFLDYFVPRKVMAGDEFILKTCPRVIRKLLRWMRTKKLVDLTNDDIKEMCENQLWEDTMRDMGF
Ga0209799_10069834	3300027654	Tropical Forest Soil	LKTCPRVIRKFLRWMREKKLVDLTNDEMKDMCENQLWEDTVRDMGL
Ga0209689_11609323	3300027748	Soil	VREFLDYFVPRKVMAGNEFILKTCPRVMRKLLRWMREKKLVDLTNDEMKGMCENQLWEDTVRDMEL
Ga0209074_103129302	3300027787	Agricultural Soil	YSRYTHIAENVREFLDYFVPRKVMAGNEFILKTCPRVIRKLLRWMREKELVAFTNDEMKDMCENQLWEDTVRDMGL
Ga0209465_100259782	3300027874	Tropical Forest Soil	MAGNAFLLKTCPRVIRKLLRWMREKKLVDCTHEEIQAMCENQLWEDTVREMGL
Ga0209465_100445314	3300027874	Tropical Forest Soil	MAGNEFILKVCPRVIRKFLRWMREKKLVDFTNDEIKDMCENQLWEDTVRDMGL
Ga0209590_105534522	3300027882	Vadose Zone Soil	RSFIDLYDHTHIESNVREFLDYFVPRKVMAGNEFILKTCPRVIRKFLRWMREKKLVDCTNDEIQAMCENQLWEDTVRDMGL
Ga0209382_102427252	3300027909	Populus Rhizosphere	MAGNEFILKTCPRVMRQLLKWMKNKKLVDLTNDDIKEMCENQLWEDTRRDMGF
Ga0209857_10716082	3300027957	Groundwater Sand	PRKVIAGNAFILKTCPRVMRKLLKWMRDKHLVDVTNDDIQGMCENQLWEDTVRDMGL
Ga0299913_105607172	3300031229	Soil	EFLDYFVPGKVMAGDEFILKTCPRVIRKLLRWMRDKKLVDLTNDDIKEMCENQLWGDTMRDMGF
Ga0306918_108416882	3300031744	Soil	MAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDL
Ga0318492_106165252	3300031748	Soil	LYDHTHIEANVSEFLDYFVPRKVLAGNAFILQTCPRVIRKFLRWMREKKLVDFTNDEIKDVCENQLWEDTVRDLGL
Ga0318548_101047692	3300031793	Soil	MAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIKDVCENQLWEDTVRDLGL
Ga0306919_109417141	3300031879	Soil	HIAENVREFLDYFVPRKVMAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0306923_104282392	3300031910	Soil	DLYDHTHIESNVREFLDDFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKKLVDLTNDEIKDMCENPLWEDTLRDMGF
Ga0310913_102061532	3300031945	Soil	VSEFLDYFVPRKVLAGNAFILQTCPRVIRKFLRWMREKKLVDFTNDEIKDVCENQLWEDTVRDLGL
Ga0306926_107957511	3300031954	Soil	NSKSCQKCGKVMAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0318504_104386841	3300032063	Soil	ILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0306924_114272192	3300032076	Soil	PFFQGCQKCGKVMAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0306920_1033600471	3300032261	Soil	VREFLDYFVPRKVMAGHEFILKTCPRVIRKFLRWMREKKLVDFTNDEIQGMCENQLWEDTVRDLGL
Ga0310914_102572361	3300033289	Soil	KAYEEAKKREKSFIDLYDHTHIESNVREFLDDFVPRKVMAGNEFILKTCPRVIRSLLRWMRNKKLVDLTNDEIKDMCENPLWEDTLRDMGF
Ga0370546_031575_197_358	3300034681	Soil	MAGDDFILKTCPRVIRKLLKWMREKHLVDVTNEDIQAMCENQLWEDTMRDMGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073315

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences