NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F073300

Metagenome / Metatranscriptome Family F073300

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073300
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 38 residues
Representative Sequence MPISPARVAAFDILLRVEREDSYASELLHSSRYAELS
Number of Associated Samples 110
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 48.33 %
% of genes near scaffold ends (potentially truncated) 99.17 %
% of genes from short scaffolds (< 2000 bps) 93.33 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(10.833 % of family members)
Environment Ontology (ENVO) Unclassified
(21.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(38.333 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.54%    β-sheet: 0.00%    Coil/Unstructured: 58.46%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF02911Formyl_trans_C 79.17
PF01327Pep_deformylase 6.67
PF01264Chorismate_synt 4.17
PF13570PQQ_3 0.83
PF09107SelB-wing_3 0.83
PF01594AI-2E_transport 0.83
PF04073tRNA_edit 0.83
PF13561adh_short_C2 0.83
PF07690MFS_1 0.83
PF03692CxxCxxCC 0.83
PF07732Cu-oxidase_3 0.83
PF02518HATPase_c 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG0223Methionyl-tRNA formyltransferaseTranslation, ribosomal structure and biogenesis [J] 79.17
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 6.67
COG0082Chorismate synthaseAmino acid transport and metabolism [E] 4.17
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.83
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.83

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.00 %
UnclassifiedrootN/A5.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps_contig39133.24777All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1737Open in IMG/M
3300004092|Ga0062389_104151005All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae544Open in IMG/M
3300005330|Ga0070690_100120225All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1762Open in IMG/M
3300005335|Ga0070666_10104046All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1959Open in IMG/M
3300005337|Ga0070682_101363720All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter605Open in IMG/M
3300005435|Ga0070714_100214185All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1767Open in IMG/M
3300005532|Ga0070739_10398035All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter640Open in IMG/M
3300005577|Ga0068857_101442793All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter670Open in IMG/M
3300005900|Ga0075272_1054470All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae741Open in IMG/M
3300006052|Ga0075029_101193377Not Available531Open in IMG/M
3300006797|Ga0066659_11783266All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300009098|Ga0105245_11675280All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300009621|Ga0116116_1150537All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300009760|Ga0116131_1110362All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300009762|Ga0116130_1260281Not Available552Open in IMG/M
3300009839|Ga0116223_10885264Not Available509Open in IMG/M
3300010048|Ga0126373_11681271All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300010343|Ga0074044_10002248All Organisms → cellular organisms → Bacteria16916Open in IMG/M
3300010359|Ga0126376_11880044All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300010379|Ga0136449_101906059All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300010397|Ga0134124_12549653All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300011270|Ga0137391_10969714All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis693Open in IMG/M
3300012206|Ga0137380_11751353All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300012355|Ga0137369_10940352All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012357|Ga0137384_10062589All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3086Open in IMG/M
3300012362|Ga0137361_11776666All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300012363|Ga0137390_10255334All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1738Open in IMG/M
3300012582|Ga0137358_10949436All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012929|Ga0137404_10177692All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1790Open in IMG/M
3300012944|Ga0137410_11879629All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012971|Ga0126369_10225609All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1826Open in IMG/M
3300012984|Ga0164309_10160270All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1507Open in IMG/M
3300012986|Ga0164304_11033385All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300014158|Ga0181521_10095593All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1839Open in IMG/M
3300014158|Ga0181521_10141573All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1396Open in IMG/M
3300014165|Ga0181523_10669742All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300014201|Ga0181537_10382454All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300014326|Ga0157380_11268192All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300014493|Ga0182016_10624943All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300014655|Ga0181516_10566176Not Available585Open in IMG/M
3300014657|Ga0181522_10125872All Organisms → cellular organisms → Bacteria → Acidobacteria1490Open in IMG/M
3300016357|Ga0182032_10848324All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae774Open in IMG/M
3300016702|Ga0181511_1412482All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis559Open in IMG/M
3300017931|Ga0187877_1136538All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300017932|Ga0187814_10263538All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300017932|Ga0187814_10386869All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300017933|Ga0187801_10168630All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300017933|Ga0187801_10252913All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300017933|Ga0187801_10386474All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300017937|Ga0187809_10356442All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300017955|Ga0187817_10189531All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300017972|Ga0187781_10884400All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300017973|Ga0187780_10426568All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300017974|Ga0187777_10925938All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300017975|Ga0187782_10327473All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300017975|Ga0187782_10552448All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300017994|Ga0187822_10162767All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300018006|Ga0187804_10201920All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300018007|Ga0187805_10599549All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300018022|Ga0187864_10018147All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4427Open in IMG/M
3300018024|Ga0187881_10093215All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1371Open in IMG/M
3300018027|Ga0184605_10048822All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1796Open in IMG/M
3300018035|Ga0187875_10450759All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300018046|Ga0187851_10256912All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300018085|Ga0187772_10368260All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis996Open in IMG/M
3300020170|Ga0179594_10185713All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300021170|Ga0210400_10079925All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2568Open in IMG/M
3300021401|Ga0210393_10867992All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300021407|Ga0210383_10495200All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300021407|Ga0210383_11535781All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300021420|Ga0210394_10308433All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1389Open in IMG/M
3300021433|Ga0210391_10726709All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300021474|Ga0210390_10487875All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300021478|Ga0210402_10768279All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300021559|Ga0210409_11433757All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300021560|Ga0126371_12068141All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300021861|Ga0213853_10875239All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300024288|Ga0179589_10211591All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300025553|Ga0208080_1039459All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1319Open in IMG/M
3300025898|Ga0207692_10242226All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300025898|Ga0207692_11020720Not Available546Open in IMG/M
3300025915|Ga0207693_11479982All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300025928|Ga0207700_11196611All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300025929|Ga0207664_10385345All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300025939|Ga0207665_10115658All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1890Open in IMG/M
3300025939|Ga0207665_10317365All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300026312|Ga0209153_1154659All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300026317|Ga0209154_1047776All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1916Open in IMG/M
3300026317|Ga0209154_1108914All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300026334|Ga0209377_1127293All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300026542|Ga0209805_1204328All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300027313|Ga0207780_1004531All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3395Open in IMG/M
3300027376|Ga0209004_1062848All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia626Open in IMG/M
3300027545|Ga0209008_1093874All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300027603|Ga0209331_1111276All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300027725|Ga0209178_1106998All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300027842|Ga0209580_10137878All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300027911|Ga0209698_10368299All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300028788|Ga0302189_10081195All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1511Open in IMG/M
3300028800|Ga0265338_10463816All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300029910|Ga0311369_11298935All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300030991|Ga0073994_11467131All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300031250|Ga0265331_10138934All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300031524|Ga0302320_11712891All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300031820|Ga0307473_10998444All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300031820|Ga0307473_11182700All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300031823|Ga0307478_10539879All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300031859|Ga0318527_10290237All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300031945|Ga0310913_10337938All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300031954|Ga0306926_10555343All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1406Open in IMG/M
3300032067|Ga0318524_10759126Not Available512Open in IMG/M
3300032782|Ga0335082_10534322All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300032805|Ga0335078_10071376All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5073Open in IMG/M
3300032829|Ga0335070_10051910All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4507Open in IMG/M
3300032892|Ga0335081_10843648All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300032893|Ga0335069_10178689All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2604Open in IMG/M
3300032897|Ga0335071_10368085All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1391Open in IMG/M
3300032955|Ga0335076_10190518All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1955Open in IMG/M
3300033158|Ga0335077_11012901All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300033807|Ga0314866_042474All Organisms → cellular organisms → Bacteria729Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.83%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.17%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment8.33%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.67%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.33%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.50%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.67%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.67%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.67%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.67%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.67%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.83%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.83%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.83%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.83%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.83%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.83%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.83%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005900Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009621Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150EnvironmentalOpen in IMG/M
3300009760Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100EnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016702Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025553Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027313Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031250Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaGHost-AssociatedOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033807Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_039908702199352024SoilMPVSPARAAAFEILMRIETTDAYASEMLHSSQFAKLSRADHGL
Ga0062389_10415100513300004092Bog Forest SoilMAISPARIAAFDILLRVDQQDAYASELLHAPDYSKLSPAN
Ga0070690_10012022533300005330Switchgrass RhizosphereMPVSAARAAAFDILMRVGQQGAYASELLHSAQFRTLSATDHGLA
Ga0070666_1010404613300005335Switchgrass RhizosphereMPIAPARIAAFDILLRVEQTGAFASELLHSSGYSQLTSADHG
Ga0070682_10136372013300005337Corn RhizosphereVKTSPARTAAFEILMRVETTDAYASELLNSSRFSRLSTADHGLV
Ga0070714_10021418533300005435Agricultural SoilMPISPARAAAFDLLMRIEQQDAYASEILHSKQYEKLSNVDHGLTT
Ga0070739_1039803523300005532Surface SoilMSGVSPARITAFDILLRVEQGGAYASELLHANSATP
Ga0068857_10144279323300005577Corn RhizosphereLISPARTAAFDILLRVETQNAYASELLHSDRLEKL
Ga0075272_105447013300005900Rice Paddy SoilMPVSVARRIAFDVLLRVESESAYASELLHSALAPE
Ga0075029_10119337713300006052WatershedsMAVSVARSVAFDILVRVEREDSYASELLHSPALAQ
Ga0066659_1178326623300006797SoilMPISPARAAAFDILLRVERESSYASELLHSKEQNK
Ga0105245_1167528023300009098Miscanthus RhizosphereMSISPARAAAFDILLRIEQQDAYASELLHSSQYEKLSA
Ga0116116_115053713300009621PeatlandMPISAARLAAFEILLRVQEQGAYASELLHSERLVSLSA
Ga0116131_111036223300009760PeatlandMAVSPARAVAFEIFLRVEREDSYAAELLHSAHAAKL
Ga0116130_126028113300009762PeatlandMPISAARRAAFEILLRVEEQGAYASELLHSERLAALSAA
Ga0116223_1088526413300009839Peatlands SoilMAVSPARAAAFEILQRVEREQSYAGELLHSARFNRLSSADHGL
Ga0126373_1168127123300010048Tropical Forest SoilMLMPVSPARAAAFDILLGVEQRNAYASELLHSERLSKLSA
Ga0074044_1000224813300010343Bog Forest SoilMAVSPARAAAFEILQRVEREQSYAGELLHSARFNRLSSADH
Ga0126376_1188004423300010359Tropical Forest SoilMPISPARIAAFEILIRIEGTDAYASELLHASRFSRLSPADH
Ga0136449_10190605923300010379Peatlands SoilMAVSPARAAAFEILQRVEREQSYAGELLHSVRFNKLSSADHGLAT
Ga0134124_1254965313300010397Terrestrial SoilMPIAPARIAAFDILLRVEQTGAFASELLHSSGYSQLTS
Ga0137391_1096971423300011270Vadose Zone SoilMPVSPARAAAFDILLRVERDSAYTSELLHSAKYDQLS
Ga0137380_1175135323300012206Vadose Zone SoilMAISPARAAAFDILLRMERQHAYASELLHSGQYQKLSPG
Ga0137369_1094035223300012355Vadose Zone SoilMPVSPARAAAFEILLRIETTDAYASELLHSSRFAKL
Ga0137384_1006258943300012357Vadose Zone SoilMSISPARTTAFDILLQVEKEDAYASELLHSAQYATLSRGS
Ga0137361_1177666623300012362Vadose Zone SoilMPATPARAAAFEILLRVDRDHSYASELLHSDRNARLSP
Ga0137390_1025533413300012363Vadose Zone SoilMSTSPARAAAFDVLLRIEQEDAYSSELLHSSQYAK
Ga0137358_1094943623300012582Vadose Zone SoilMSISPARTAAFDILLQVEKEDAYASELLHSAKYGALSR
Ga0137404_1017769213300012929Vadose Zone SoilMAISPARVAAFEILLRVERENGYSSELLHSARYSKL
Ga0137410_1187962923300012944Vadose Zone SoilMAVSPARAAAFEILLRVERDNSYVSELLHAERNVTL
Ga0126369_1022560913300012971Tropical Forest SoilMPVSPARAAAFDVLLRVEKQDAYASELLHSARSDKLST
Ga0164309_1016027033300012984SoilMSIAPARTAAFDILLRIEQHAAYASELLHSGPYAKL
Ga0164304_1103338523300012986SoilMPTSPARAAAFDILLRIEQHDAYASELLHSGPYARLSP
Ga0181521_1009559313300014158BogMAVSLARAAAFDILLRVERESSYTSELLHSAAYASLSGPDHA
Ga0181521_1014157333300014158BogMPVSPARAAAFDILLRVEQTNAYASELLHSERLDK
Ga0181523_1066974213300014165BogMPIAPARLAAFDILLRIERQNAYAGELLHSDRLNS
Ga0181537_1038245423300014201BogMPISPARAAAFDILLRVDRESSYASELLHSSAYENLSTP
Ga0157380_1126819223300014326Switchgrass RhizosphereMPVSAARAAAFDILMRVGQQGAYASELLHSAQFRTLSATDHG
Ga0182016_1062494313300014493BogMAVSPARAAAFEILLRVERDDSYAAELLHSAAFCKLTSRDHG
Ga0181516_1056617613300014655BogMPISAARLAAFEILLRVQEQGAYASELLHSERLASL
Ga0181522_1012587213300014657BogMPVSPARSLAFDILLRVERESAYASELLHSAASEN
Ga0182032_1084832423300016357SoilMPISPARSVAFDILLRIDKQNAYASELLHSDRLEKLTSA
Ga0181511_141248223300016702PeatlandMPVSPARAAAFDILLRVEQTNAYASELLHSERLDKL
Ga0187877_113653823300017931PeatlandMPISAARLAAFEILLRVQEQGAYASELLHSERLASLS
Ga0187814_1026353833300017932Freshwater SedimentMPISPARVAAFDILLRVEREDSYASELLHSSRYSEL
Ga0187814_1038686923300017932Freshwater SedimentMPVSPARVAAFHILLRVEQEDAYAAELLHSTRYTRIDSAD
Ga0187801_1016863023300017933Freshwater SedimentVAAMPVSPARAAAFEILLRVEHEDSYADELLHSARLAKLTP
Ga0187801_1025291313300017933Freshwater SedimentMPVSSARAAAFEILLRIGREDSYANELLHSASPAKLSS
Ga0187801_1038647413300017933Freshwater SedimentMPISPARVAAFDILFRVERENSYASELLHASRYAELS
Ga0187809_1035644213300017937Freshwater SedimentMPVSPARATAFDILLRIDRQNSYASELLHSQIYGKLS
Ga0187817_1018953123300017955Freshwater SedimentMPISPARVAAFETLLRVDQKNSYASELLHSSRYKKLSAAD
Ga0187781_1088440013300017972Tropical PeatlandMPVSPARATAFDILVRVERESSYAAELLHSAAYSR
Ga0187780_1042656813300017973Tropical PeatlandMNGMPVSPARAAAFDILLRVECESSYASELLHSAACER
Ga0187777_1092593813300017974Tropical PeatlandMPISPARLAAFDILLRVEQQGAYASELLHSSRHQKLASAD
Ga0187782_1032747313300017975Tropical PeatlandMPASPARAAAFDILVRVERESSYAAELLHSAAYSR
Ga0187782_1055244813300017975Tropical PeatlandMSVSPARRTAFEVLLRVETQDAYASELLNSARVAALSPVDRHLCM
Ga0187822_1016276713300017994Freshwater SedimentMPISPARVAAFDILLRVERESSYASELLHADTYNRL
Ga0187804_1020192023300018006Freshwater SedimentMPASPARAAAFDILLRVERESSYASELLHSATYEHLS
Ga0187805_1059954923300018007Freshwater SedimentMPISPARVAAFETLLRVDQKNSYASELLHSSRYKKLSAADHHLAT
Ga0187864_1001814713300018022PeatlandMAVSPARAVAFEILLRVEREESYAAELLHSARLAK
Ga0187881_1009321533300018024PeatlandMAVSPARAVAFEILLRVEREESYAAELLHSARLAKL
Ga0184605_1004882213300018027Groundwater SedimentMAVSPARAAAFDILLRVEQQDAYASELLHSPRFAK
Ga0187875_1045075923300018035PeatlandMPISPARVAAFDILLRVERDDSYASELLHSSGNAG
Ga0187851_1025691213300018046PeatlandMAVSPARAAAFEILLKVEREHSYASELLHSARYSKL
Ga0187772_1036826013300018085Tropical PeatlandMGKMSVSPARAAAFEILLKVEREQSYAAELLHSSRFSKLSRADH
Ga0179594_1018571323300020170Vadose Zone SoilMSISRARTAAFDTLLQVEKEDAYASELLHSAQYAA
Ga0210400_1007992513300021170SoilMPISPARVAAFDILLRVEREDSYASELLHASRYANLS
Ga0210393_1086799213300021401SoilMPVSPARAAAFDILLRVERESSYASDLLHSTAHERLST
Ga0210383_1049520013300021407SoilMPISPARIAAFDILLRVERESSYASELLHSSRYASLS
Ga0210383_1153578113300021407SoilMPVSAARAAAFDILLRAERESSYASELLHSATYEGLSRLD
Ga0210394_1030843333300021420SoilMPISPARTAAFDILLRVEREDSYASELLRSARHANLSP
Ga0210391_1072670923300021433SoilMPISPARVAAFDILLRVEREDSYASELLHSSRYAELS
Ga0210390_1048787513300021474SoilMPISPARVAAFDILLRVERDDSYASELLHSSGNAGLSAAAPP
Ga0210402_1076827913300021478SoilMPISPARVAAFDILLRVERENSYASELLHASRYAN
Ga0210409_1143375723300021559SoilMPISPARVAAFDILLRVEREDSYASELLHSSRYAGL
Ga0126371_1206814113300021560Tropical Forest SoilMPVSPARAAAFDILLRVEREDSYAAELLHSTRCADL
Ga0213853_1087523913300021861WatershedsMPASPARTAAFDILLRVERESSYVSELLHSNAYADMSTP
Ga0179589_1021159123300024288Vadose Zone SoilMAISPARAAAYDLLMRIEQQDAYASELLHSPQYEKLS
Ga0208080_103945913300025553Arctic Peat SoilMLSRYASCMATPAREVAYDILLRVEQQDAYASELLHGGRLESLS
Ga0207692_1024222623300025898Corn, Switchgrass And Miscanthus RhizosphereMPVSPARAAAFEILMRIETTDAYASEMLHSAWAAKLSPEDH
Ga0207692_1102072013300025898Corn, Switchgrass And Miscanthus RhizosphereMAGLKAAISPARLAAFNILLRVEREAAYAVELLHS
Ga0207693_1147998223300025915Corn, Switchgrass And Miscanthus RhizosphereMPVSPARAAAFEILMRIETSDAYASEMLHSARAAKLSSEDHGLL
Ga0207700_1119661113300025928Corn, Switchgrass And Miscanthus RhizosphereMAVSPARAAAFEILMRIETTDAYASEMLHSSRFAKLSSADHG
Ga0207664_1038534533300025929Agricultural SoilMPVSPPRAAAFEILLRIDATDAYASELLHSLRFSK
Ga0207665_1011565813300025939Corn, Switchgrass And Miscanthus RhizosphereMPISPARTAAFDILLKVEREAAYASDLLHSPAYEQLS
Ga0207665_1031736513300025939Corn, Switchgrass And Miscanthus RhizosphereMPISPARASAFDILLRIEQQDAYASELLHGGEYCKLS
Ga0209153_115465923300026312SoilMPVSPARAAAFEILMRVERENSYASELLHAARYLRLSPAD
Ga0209154_104777613300026317SoilMPISPARTAAFDILLRVEQEDSYASELLHSTRCAELAAP
Ga0209154_110891423300026317SoilMAVSPARAAAFDIVLRVEQQDAYASELLHSSRFAKLSP
Ga0209377_112729313300026334SoilMPISPARVAAFEILLRVERENAYASELLHSARYSKLSP
Ga0209805_120432813300026542SoilVPQSMRVSPARSAAFDVLFRVESQASYASELLHSNLLAG
Ga0207780_100453153300027313Tropical Forest SoilMPVSAARAAAFDILLRVETQDAYASELLHSERLDQ
Ga0209004_106284823300027376Forest SoilMPVSAARATGFDILLRMERENAYAAELLHSSPYAKLSAV
Ga0209008_109387423300027545Forest SoilMPVSAARSAAFDILLRAERESSYASELLHSATYEGLSR
Ga0209331_111127623300027603Forest SoilMAISPARAVAFDVLLRIEQQDAYASELLHSSQYVKLSPA
Ga0209178_110699823300027725Agricultural SoilMLSSSRAAAFEILLRVEQHGAYASELLHSERYKKLSYAD
Ga0209580_1013787813300027842Surface SoilMPISPARVAAFDILLRVEQEDSYASELLHSSRYANLS
Ga0209698_1036829933300027911WatershedsMAVSPARTAAFEILLKVEREQSYASELLHSSRFAKLS
Ga0302189_1008119533300028788BogMAISPARSAAFDILLRVELRNAYASELLHSGRWEQLS
Ga0265338_1046381623300028800RhizosphereMPVSPARAAAFDILLRVERESSYSSELLHAKTHQN
Ga0311369_1129893513300029910PalsaMAVSQARGAAFEILLRVERDGSYASELLHSDRLTK
Ga0073994_1146713113300030991SoilMAVSAARSVAFDILLRVGSQGSYASELLHSAALTKLAARDHGLVTELGQ
Ga0265331_1013893423300031250RhizosphereMAVSPGRAVAFEILLRVEREDSYASELLHSSLSAKI
Ga0302320_1171289113300031524BogVVSAARAAAFDILLRVERDGAYASELLHSRIHDRLDAGD
Ga0307473_1099844413300031820Hardwood Forest SoilMPVSPARAAAFDILLRVEQQDAYASELLHSAQYAKLSSQ
Ga0307473_1118270023300031820Hardwood Forest SoilMPVSPARVAAFDILLRIEQHDAYASELLHSRQYAK
Ga0307478_1053987923300031823Hardwood Forest SoilMHYDTVPNVSPARAAAFDILLRVERESSYASELLHSASCQRLTT
Ga0318527_1029023713300031859SoilMPASPARAAVFDILLRVELQDAYASELMHSARLDSLSQA
Ga0310913_1033793823300031945SoilMPASPARAAAFDILLRVEQQEAYASELLHSDKVAKLI
Ga0306926_1055534333300031954SoilMPISPARLAAFDILLRVEQQGAYASELLHSSRHQKLSSAD
Ga0318524_1075912623300032067SoilMPVSPARAVAFDILLRVELQNAYASELLHSRRLDQLS
Ga0335082_1053432223300032782SoilMAISAARVAAFDILLRVDQQDAYASELLHAPDHANLSPAD
Ga0335078_1007137673300032805SoilMAMPISPARTAAYDILLRVERQDAYAAELLHSERLEPLGP
Ga0335070_1005191063300032829SoilMPISPARIAAFDILLRVETQDAYASELLHSALLDKLSS
Ga0335081_1084364813300032892SoilMPISAARQIAYDVLLRVETQQAYASDLLHSALKGKI
Ga0335069_1017868913300032893SoilMPVSPARAAAFHILLRVETQDAYASELLHSWLLENASLRD
Ga0335071_1036808533300032897SoilMPVSPARAAAFDILLRVERESSYASELLHSVAYEAMATPDH
Ga0335076_1019051813300032955SoilMPVSPARAAAFDILTRVERENSYASELLHSAAYANLSKADH
Ga0335077_1101290113300033158SoilMAISPARAAACEILLKVERDRSFSDELLHAERFNKLSSIDHGLTT
Ga0314866_042474_609_7283300033807PeatlandMAISPTRVAAYQILQRVEQEDAYASELLHSARYAKLSAAD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.