Metagenome Family F073298

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073298
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	113 residues
Representative Sequence	VTDYGVLFRALAISRLAGTPNHEKVREILKRELEARGFSVEQHAFSGRPARALLGAPRVVHGINLIARPSGRQAVRPSVWLVAHYDSKGQPISMAVRLLGF
Number of Associated Samples	99
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.67 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	80.83 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.833 % of family members)
Environment Ontology (ENVO)	Unclassified (30.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.71% β-sheet: 25.58% Coil/Unstructured: 52.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00701	DHDPS	75.00
PF00437	T2SSE	7.50
PF02826	2-Hacid_dh_C	5.83
PF02308	MgtC	0.83
PF00406	ADK	0.83
PF04389	Peptidase_M28	0.83
PF00459	Inositol_P	0.83
PF08867	FRG	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	150.00
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.83
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.83
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	79.17 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	79.17 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	38.33 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	15.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	38.33 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	15.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	38.33 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	15.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	38.33 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	11.67 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	38.33 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	11.67 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004281\|Ga0066397_10036845	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300004480\|Ga0062592_100275463	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300005186\|Ga0066676_10309761	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005441\|Ga0070700_100029352	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3279	Open in IMG/M
3300005450\|Ga0066682_10051164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2504	Open in IMG/M
3300005450\|Ga0066682_10163338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1421	Open in IMG/M
3300005451\|Ga0066681_10284579	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005518\|Ga0070699_100846832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	837	Open in IMG/M
3300005518\|Ga0070699_100903927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	809	Open in IMG/M
3300005536\|Ga0070697_101431363	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005540\|Ga0066697_10597196	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005545\|Ga0070695_100517481	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005552\|Ga0066701_10303326	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005552\|Ga0066701_10857785	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	539	Open in IMG/M
3300005558\|Ga0066698_10135223	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300005574\|Ga0066694_10316851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	742	Open in IMG/M
3300005586\|Ga0066691_10521724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	709	Open in IMG/M
3300005598\|Ga0066706_10400630	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300006031\|Ga0066651_10823881	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300006046\|Ga0066652_101392810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	657	Open in IMG/M
3300006049\|Ga0075417_10410523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	671	Open in IMG/M
3300006800\|Ga0066660_10117368	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300006845\|Ga0075421_101264539	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300006846\|Ga0075430_101358173	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300006847\|Ga0075431_101000028	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300006852\|Ga0075433_10375480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1255	Open in IMG/M
3300006894\|Ga0079215_11509640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	530	Open in IMG/M
3300006903\|Ga0075426_10040039	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3349	Open in IMG/M
3300006914\|Ga0075436_100327730	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300006914\|Ga0075436_100537831	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	857	Open in IMG/M
3300007265\|Ga0099794_10079053	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1620	Open in IMG/M
3300007265\|Ga0099794_10525060	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	624	Open in IMG/M
3300009012\|Ga0066710_103044625	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	651	Open in IMG/M
3300009090\|Ga0099827_10089770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2420	Open in IMG/M
3300009090\|Ga0099827_11280756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	638	Open in IMG/M
3300009094\|Ga0111539_10359839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1694	Open in IMG/M
3300009137\|Ga0066709_100825007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1346	Open in IMG/M
3300009137\|Ga0066709_102501465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	696	Open in IMG/M
3300009156\|Ga0111538_10044277	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5725	Open in IMG/M
3300009162\|Ga0075423_12150688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300009802\|Ga0105073_1071276	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300010326\|Ga0134065_10447028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	528	Open in IMG/M
3300010329\|Ga0134111_10118992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1026	Open in IMG/M
3300010329\|Ga0134111_10363039	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300010329\|Ga0134111_10545750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M
3300010329\|Ga0134111_10564397	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	506	Open in IMG/M
3300010333\|Ga0134080_10296508	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300010337\|Ga0134062_10720348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	526	Open in IMG/M
3300010361\|Ga0126378_12411885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300010396\|Ga0134126_10934574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	974	Open in IMG/M
3300010403\|Ga0134123_10922332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
3300010403\|Ga0134123_11169581	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	797	Open in IMG/M
3300011269\|Ga0137392_10445439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1076	Open in IMG/M
3300011419\|Ga0137446_1163686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	537	Open in IMG/M
3300011430\|Ga0137423_1013062	All Organisms → cellular organisms → Bacteria	2602	Open in IMG/M
3300011444\|Ga0137463_1132409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	938	Open in IMG/M
3300012179\|Ga0137334_1019069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1336	Open in IMG/M
3300012200\|Ga0137382_10084578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2064	Open in IMG/M
3300012203\|Ga0137399_10400946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1144	Open in IMG/M
3300012203\|Ga0137399_10766035	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300012206\|Ga0137380_10151797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2113	Open in IMG/M
3300012207\|Ga0137381_11532218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	558	Open in IMG/M
3300012208\|Ga0137376_10036832	All Organisms → cellular organisms → Bacteria	3926	Open in IMG/M
3300012210\|Ga0137378_10076375	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300012285\|Ga0137370_10045356	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2342	Open in IMG/M
3300012355\|Ga0137369_10035719	All Organisms → cellular organisms → Bacteria	4500	Open in IMG/M
3300012360\|Ga0137375_10130125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2498	Open in IMG/M
3300012362\|Ga0137361_10348005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1360	Open in IMG/M
3300012582\|Ga0137358_10665753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300012922\|Ga0137394_10618100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	916	Open in IMG/M
3300012922\|Ga0137394_10702406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	851	Open in IMG/M
3300012922\|Ga0137394_11364315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300012927\|Ga0137416_10034930	All Organisms → cellular organisms → Bacteria	3393	Open in IMG/M
3300012927\|Ga0137416_10987966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M
3300012929\|Ga0137404_10112969	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2209	Open in IMG/M
3300012929\|Ga0137404_11419384	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	641	Open in IMG/M
3300012944\|Ga0137410_10480225	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1013	Open in IMG/M
3300012972\|Ga0134077_10014755	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300014154\|Ga0134075_10236281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300014326\|Ga0157380_13469429	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300015052\|Ga0137411_1196688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1799	Open in IMG/M
3300015264\|Ga0137403_10015846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	8166	Open in IMG/M
3300015371\|Ga0132258_10055498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9096	Open in IMG/M
3300015374\|Ga0132255_102683235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	761	Open in IMG/M
3300017654\|Ga0134069_1326344	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300017656\|Ga0134112_10041752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1643	Open in IMG/M
3300017657\|Ga0134074_1041662	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300017657\|Ga0134074_1344636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300017657\|Ga0134074_1401385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300017997\|Ga0184610_1180323	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	701	Open in IMG/M
3300017997\|Ga0184610_1182333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	698	Open in IMG/M
3300018056\|Ga0184623_10373218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	634	Open in IMG/M
3300018074\|Ga0184640_10295819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	735	Open in IMG/M
3300018074\|Ga0184640_10366819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	652	Open in IMG/M
3300019789\|Ga0137408_1007454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	898	Open in IMG/M
3300021073\|Ga0210378_10001992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10531	Open in IMG/M
3300021073\|Ga0210378_10065196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1430	Open in IMG/M
3300021080\|Ga0210382_10285432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	725	Open in IMG/M
3300021081\|Ga0210379_10113537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1134	Open in IMG/M
3300024224\|Ga0247673_1072836	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300024330\|Ga0137417_1136417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1536	Open in IMG/M
3300025327\|Ga0209751_10911291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300025934\|Ga0207686_11316168	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	593	Open in IMG/M
3300025939\|Ga0207665_10607058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	855	Open in IMG/M
3300026075\|Ga0207708_10050135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3178	Open in IMG/M
3300026324\|Ga0209470_1065997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1694	Open in IMG/M
3300026329\|Ga0209375_1020448	All Organisms → cellular organisms → Bacteria	3813	Open in IMG/M
3300026343\|Ga0209159_1290636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	500	Open in IMG/M
3300026532\|Ga0209160_1161625	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	997	Open in IMG/M
3300026548\|Ga0209161_10175239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1217	Open in IMG/M
3300027787\|Ga0209074_10059631	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1192	Open in IMG/M
3300027903\|Ga0209488_10611729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300027909\|Ga0209382_11036148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	852	Open in IMG/M
3300028536\|Ga0137415_10802713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M
3300028811\|Ga0307292_10297419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	676	Open in IMG/M
3300028819\|Ga0307296_10022436	All Organisms → cellular organisms → Bacteria	3328	Open in IMG/M
3300028878\|Ga0307278_10002789	All Organisms → cellular organisms → Bacteria	8561	Open in IMG/M
3300031226\|Ga0307497_10433109	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M
3300031720\|Ga0307469_10146634	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300033815\|Ga0364946_072993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	737	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.67%
Host-Associated	Host-Associated	13.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.83%
Plants	Host-Associated → Plants	13.33%
Aquatic	Environmental → Aquatic	10.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.67%
Sediment	Environmental → Aquatic → Sediment	7.50%
Freshwater	Environmental → Aquatic → Freshwater	3.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.50%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066397_100368452	3300004281	Tropical Forest Soil	VTDYGVLFHELAIPRLVGSANHRKVRDILTRELEARGFSVEGHAFSGRPARALLTTPRTVQGINLIASRLPPAGQAVRPSVWLVAHYDSKGQPISMALRLLG
Ga0062592_1002754632	3300004480	Soil	VTDYGVLFGELAVPRLVGTPNHTKVRGILTRELEARGFSVEHHAFSIRPARVLLGAPRLVSGINLIAQRAVRPSTWLVAHYDSKGQPISMWVRLAG
Ga0066676_103097613	3300005186	Soil	AIPRLVGTPNHQRVREILKRELIARGFSVEEHVFSGRPARALLGVPSAVNGTNLIGTRAVGPSGRPAVWLVAHYDSKGQQSRWRSGWWDLPRYSSDCW*
Ga0070700_1000293524	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VTDYGVLFGELAVPRLVGTPNHTKVREILTRELEARGFSVEHHAFSIRPARALLGAPRLVSGINLIAQRAVRPSTWLVAHYDSKGQPISMWVRLAGFTLLVLGGFLLLLNWIAAVVTLALGVAIVAQNRVNDNS
Ga0066682_100511641	3300005450	Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELAARGFAVEEHAFSRRPARALLGVPRTISGVNLIARSIRPSAHPPVWLVAHYDSKGQPISMAIRLIGFAALVLGLITLFFVKLPAIVLLAVAVVIVSQNRVNDNSP
Ga0066682_101633382	3300005450	Soil	VTDYGVLFRALAISRLAGTPNHEKVREILNRELEARGFSVEQHAFSGRPARALLGVPRVVHGINLIARPSGRPAVPPSVWLVAHYDSKGQPISMAVRLLGFGALLIGLIGLLFAPPLPPVPALAAIALGGGAAIALLNRVTDNS
Ga0066681_102845791	3300005451	Soil	VTDYAALLRELAIPRLVGTANHQKVRNVLTRELMSRGFTVEEHAFTGRPSRMFFGAPTAIDGVNLIAVRPSGRPAVRPSVWLVAHYDSKGQPIAMALRLLGVFSLVLAMIGFFFVPGPALVF
Ga0070699_1008468321	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTDYGVLFRELAIPRLVGTPNHAKVREILNRELEARGFSVEQHAFSGRPARALLGAPRVVRGINLLGRPRSPLGSNRPTVQPSIWLVAHYDSKGQPISMALRLLGFGVLLIGLAALLFAAVPALVLVA
Ga0070699_1009039272	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTDYGLLFRELAVPRLVGTPNHQKVREVLKRELRARGFAVEEHAFSGRPARALLGTPSLVHGINLIAPPIRPSAHPPVWLVAHYDSKGQPISMAMRLIGFGMLVVGVLALLIALIPALVMLAAALLIV
Ga0070697_1014313632	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTDYGVLFRELAIPRLVGTPNHAKVREILNRELEARGFSVEQHAFSGRPARALLGAPRVVRGINLLGRPRSPLGSNRPTVQPSIWLVAHYDSKG
Ga0066697_105971961	3300005540	Soil	VRSYAVTDYAVLFRELAIPRLVGTSNHQRVRETLKRELIARGFTVEEHVFSGRPARALIGAPRVVSGTNLIARRPSDRPTARPPVWLVAHYDSKGQPISMAMRLLG
Ga0070695_1005174811	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTDYGVLFHELAIPRLVGTPNHLKVREILKRELQGRGFQVEEHAFTGRPARALFGVPRQISGTNLIALRPSGRPTVRPSVWLVAHYDAKGQPLSMLVRLLGFVLFVLGSVGLVVDFMTAVVVLGLGLVL
Ga0066701_103033261	3300005552	Soil	VTDYGVLFRELAIPRLVGSVNHAKVREILKRELAARDFSVEEHAFTGRPSSALFGTPRVISGVNLIARPAVPSPRPVVWLVAHYDSKGQPISM
Ga0066701_108577851	3300005552	Soil	VRSYAVTDYAVLFRELAIPRLVGTPNHQRVREILKRELIARGFSVEEHVFSGRPARALLGVPSAVNGTNLIGTRAVGPSGRPAVWLVAHYDSKGQPISMAVRLVGFAALLVGLLVVVLAPLPGLALLAAGTGV
Ga0066698_101352233	3300005558	Soil	VTDYAELFRELAVPRLVGTPNHQQVREILKRELAARGFNIEEHRFSGRPARALLGTPKLVSGINLIAERAVGPPGRPAVWLVAHYDSKG
Ga0066694_103168511	3300005574	Soil	VTDYGVLFRALAISRLAGTPNHEKVREILNRELEARGFSVEQHAFSGRPARALLGVPRVVHGINLIARPSGRPAVPPSVWLVAHYDSKGQPISMAVRLLGFGALLIGLIGLLFAPPLPPVPALAAIALGGGAA
Ga0066691_105217241	3300005586	Soil	VTDYGVLFRALAISRLAGTPNHEKVREILKRELEARGFSVEQHAFSGRPARVLLGAPRVVHGINLIARPSGRPAVRPSVWLVAHYDSKGQPISMALRLLG
Ga0066706_104006302	3300005598	Soil	VTDYAVLFRELAIPRLVGTPNHRKVREILKRELSARGFVVDEHQFTGRPARALLGTPRLVEGTNLIAHRPSDRPAVRPSVWLVAHYDSKGQPIAMLLRLLGVFSTLGAMIGFFFAVGPALVLLAIGALILSQ
Ga0066651_108238812	3300006031	Soil	VTDYGQLFRELAIPRLVGTPNHQKVREILKRELGARGFAVEEQAFAGKPSRAFFGVPSLVHGVNLIARPIHPSAHPPIWLVAHYDSKGQPISMALRLIGFGALVLGLVMLLVAIIP
Ga0066652_1013928102	3300006046	Soil	VTDYAELFRELAIPRLVGTPNHQKVREILKRELGARGFAVDEHQFTGRPARALLGTPRVVHGINLIAQRSPLQGGTVWLVAHYDSKGQPISM
Ga0075417_104105231	3300006049	Populus Rhizosphere	VTDYAELFRELAIPRLVGTPNHQRVREILQRELAARGFRIEAHAFAGRPARALLGTPRVVKGVNLIAQRGNERPAIWLVAHYDSKGQPISMAVRLLGFASLLLGLLVVFLWPVGGVAFLLAGAAIALLNRVND
Ga0066660_101173681	3300006800	Soil	VTDYGALFRELAIPRLVGSANHAKVRDILKRELAARGFSVEVHAFEGRPSRALFGVPQLVKGLNLIAHRSSDRPSVWLVAHYDSKGQPIS
Ga0075421_1012645391	3300006845	Populus Rhizosphere	LDLAGLLHALAVPRLVGTPKHTQVRERLTRELTARGFRVEEQSFTGHPAWMLLGAPRVVHGVNLIASRPSNRPTAHPPIWLSAHYDSKGQ
Ga0075430_1013581731	3300006846	Populus Rhizosphere	VTDYGVLFRELAVPRLVGTPNHQRVREALRRELEARGFDVEEHKFSGRPARALFGTPREVRGVNLIARRATVRPAVWLVAHYDSKGQPISMLVRLLGFLLLVLGLAGLVVDFMTAVVALGLGLVIVAQNRVTDNSPGA
Ga0075431_1010000282	3300006847	Populus Rhizosphere	VTDYGVLFRELAVPRLVGTPNHQRVREALRRELEARGFDVEEHKFSGRPARALFGTPREVRGVNLIARRATVRPAVWLVAHYDSKGQPISMLVRLLGFLLLVLGLAGLVVD
Ga0075433_103754802	3300006852	Populus Rhizosphere	VTDYGVLFRELAISRLVGTPNHEKVREILKRELEARGFSVEPHAFSGRPARALLGAPRVVHGINLIARASGRPAVRPSAWLVAHYDSKGQPISMAVRLVGFAALLIGLIGLLFAPVPA
Ga0079215_115096401	3300006894	Agricultural Soil	VTDYGVLFRELAVPRLVGTPNHRKVREALLRELDTRGFTVEEHPFSGRPARALFGTPREIRGINLIAHRATVRPAVWLVAHYDSKGQPISMMARLAGFALLVIGAVMLLVDFMTAI
Ga0075426_100400391	3300006903	Populus Rhizosphere	VTDYGVLFRELAISRLVGTPNHEKVREILKRELEARGFSVEPHAFSGRPARALLGAPRVVHGINLIARASGRPAVRPSAWLVAHYDSKGQPISMAVRLVGFAALLIGLIGLLFAPVPAFAAVALVGGGAAIA
Ga0075436_1003277301	3300006914	Populus Rhizosphere	VTDYAELFRELALPRLVGTANHQKVREILKRELAARGFAVEEHAFAGRPARALRGTPREVHGVNLIAHRAVRPSGHPAVWLVAHYDSKGQPISMALRLIGFGLLA
Ga0075436_1005378312	3300006914	Populus Rhizosphere	VTDYAALFRELAIPRLAGTSNHAKVREILKRELTTRGFMIEEHVFEGRPSRAFFGAPPAVRGINLIARRPSGRSTSRPSIWLVAHYD
Ga0099794_100790531	3300007265	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTPNHQKVREVLKRELTARGFAALEHRFFRRPSNAFWGFHAPIDGINLIAQRPSGHPPVRPTVWLVAHYDSKGQPISMAIRLIGFAALSFGLIT
Ga0099794_105250602	3300007265	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTANHQKVRAVLKRELATRGFLVEEHAFSGRPRRPLLGAPSWVNGINLIAQRPAGRPTVRPSLWLVAHYDSKGQPISMAVRLVAAFVLVAGVIGMLVGAIPAFVVLLLSFLLALNRVNDNSPGAVDNATAL
Ga0066710_1030446252	3300009012	Grasslands Soil	VTDYGVLFRALAISRLAGTPNHEKVREILKRELEARGFSVEQHAFSGRPARALLGAPRVVHGINLIARPSGRPAVWLVAHYDSKGQPISMAVRLLGFGALLIG
Ga0099827_100897701	3300009090	Vadose Zone Soil	VTDYAELFRELAVPRLVGTSNHQKVREILKRELSARGFVVDEHQFTGRPARALFGTPSQVHGVNLIAQRPSGRPAFRPSVWLVAHYDSKGQPISMAIRLVGFAALVLGFVALAFAPVPAIALLVVALIIVSQN
Ga0099827_112807561	3300009090	Vadose Zone Soil	VRSYAVTDYAVLFRELAIPRLVGTPNHQKVREILKRELAARGFGVEEHAFTGRPSRAFFGAPREVTGVNLIAQRPSNSQAEAWVWLVAHYDSKGQP
Ga0111539_103598393	3300009094	Populus Rhizosphere	VTDYGVLFNELAVPRLVGTSNHAKVREILTRELEARGFSVEAHHFTGRPARPLFGVPREVSGTNLIGRPSDRPAVRPSVWLVAHYVSKGQPISMLVRLL
Ga0066709_1008250071	3300009137	Grasslands Soil	VTDYAALFRELAVPRLVGTPNHQNVREILKRELSARGFAVEEHGFSGQPARALLGVPRTISGVNLIARPIRPSAHQPVWLVAHYDSKGQPISMAIRLVGF
Ga0066709_1025014651	3300009137	Grasslands Soil	VTDYAALLRELAIPRLVGTANHQKVRNVLTRELMSRGFTVEEHAFTGRPSRMFFGAPTAIDGVNLIAVRPSGRPAVGPSVWLVAHYDSKGQPIAMALRLLGVFSLVLAM
Ga0111538_100442777	3300009156	Populus Rhizosphere	VTDYGVLFNELAVPRLVGTSNHAKVREILTRELEARGFSVEAHHFTGRPARPLFGVPREVSGTNLIGRPSDRPAVRPSVWLVAHYDSKGQPISMLVRLLGSLLLVLGLAGLVVDVMIAVVALGI
Ga0075423_121506881	3300009162	Populus Rhizosphere	VTDYAELFRELAIPRLVGTPNHQRVREILQRELAARGFRIEAHAFAGRPARALLGTPRVVKGVNLIAQRGNERPAIWLVAHYDSKGQPISMAL
Ga0105073_10712762	3300009802	Groundwater Sand	VTDYGVLFRELAVPRLVGTPNHQKVRDILTRQLAARGFDVEEHAFSGRPALALLGTPSRVSGINLIAQRPTGRPTVRPSVWLVAHYDSKGQPVSMLVRLIGFLSLVIGLVWLPLGGGSTLPIIPLALGFSIL
Ga0134065_104470282	3300010326	Grasslands Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELAARGFVVAEHAFSGRPARVLLGVPRTISGVNLIARPIRPSAHPPVWLVAHYDSKGQPISMAIRLIGFAALVLGLITVFFVKLPAIMLLAVAVVI
Ga0134111_101189921	3300010329	Grasslands Soil	LFRELAVPRLVGTANHQSVREILKRELAARGFAIDEHRFTGRPARALLGTPRVVEGINLIAERSDGPTAGRPSVWLVAHYDSKGQPISMAVRLVGFFTLLAGLLGIFISTVPAVALLLV
Ga0134111_103630391	3300010329	Grasslands Soil	VRSYAVTDYAVLFRELAIPRLVGTSNHQRVRETLKRELIARGFTVEEHVFSGRPARALIGAPRVVSGTNLIARRPSDRPTARPPVWLVAHYDSKGQPISM
Ga0134111_105457502	3300010329	Grasslands Soil	VTDYGVLFRALAISRLAGTPNHEKVREILNRELEARGFSVEQHAFSGRPARALLGAPRVVHGINLIARPSSRPAVLPSVWLVAHYDSKGQPISMAVRLLGFGALLI
Ga0134111_105643971	3300010329	Grasslands Soil	VTDYAELFRELAIPRLVGTPNHQKVREILKRELGARGFAVDEHQFTGRPARALLGTPRVVHGINLIAQRSPLQGGTVWLVAHYDSKGQPISMAIRL
Ga0134080_102965081	3300010333	Grasslands Soil	VTDYGELFRALAIPRLVGTPNHQKVREILKRELAARGFAVEEHAFAGRPSRAFLGTPRTVSGVNLIARPSRPSAHPRIWLVAHYDSKGQPISMALRLIGFGALVLGLIML
Ga0134062_107203481	3300010337	Grasslands Soil	VTDYGVLFRALAISRLAGTPNHEKVREILNRELEARGFSVEQHAFSGRPARALLGVPRVVHGINLIARPSGRPAVPPSVWLVAHYDSKGQPISMAVRLLGFGALLIGLIGLLFAPPLP
Ga0126378_124118851	3300010361	Tropical Forest Soil	VTDYAVLFRELAIPRLVGTANHSRVREVLKRELTARGFSVEEHRFAGRPARALFGVPRVVNGVNLIAHAGRTDRPSTWLVAHYDSKGQPISMAVR
Ga0134126_109345741	3300010396	Terrestrial Soil	VTDYGLLFRELAVPRLVGTPNHQKVREVLKHELRARGFDVEEHAFTGRPARTLLGTPKRVSGINLIGQPALGPSGRPAVWLVAHYDSKGQPISMAVRLVGFFALLAGLLAIFI
Ga0134123_109223322	3300010403	Terrestrial Soil	VTDYGVLFGELAVPRLVGTPNHTKVREILTRELEARGFSVEHHAFSIRPARALLGAPRLVSGINLIAQRAVRPSTWLVAHYDSKGQPISMWVRLAGFTLLVLGGFLLLLNWIAAVVTLALGVAIVAQNRVNDNSAGALD
Ga0134123_111695811	3300010403	Terrestrial Soil	VTDYGLLFRELAVPRLVGTPNHQNVREVLKRELRARGFAVEEHAFSGRPARALLGTPSLVHGINLIAPPIRPSAHPPVWLVAHYDSKGQP
Ga0137392_104454391	3300011269	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTANHQKVRAVLKRELATRGFLVEEHAFSGRPRRPLLGAPSWVNGINLIAQRPAGRPTVRPSLWLVAHYDSKGQPISMAVRLVAAFVLVAGVIGMLVGAIPAFVVLLLSFLLALNRVNDNSP
Ga0137446_11636861	3300011419	Soil	VTDYAALLRELAVPRLVGTPNHAQVRERLKHELTARGFAVEEHAFAGRPSRMLLGTPPVVHGVNLIAQRAAARPSIWLAAHYDSKG
Ga0137423_10130621	3300011430	Soil	VTDYGVLFRELAVPRLVGTPNHAQVRTVLTRELEARGFTVQPHPFSGRPSRAFVRAPRVVAGVNLVARRATTRPTVWLVAHYDSKGQPISMLVRLLGVGLLV
Ga0137463_11324091	3300011444	Soil	VTDSAALLRALAIPRLVGTANHTQVRELLKRELAARGFAVEEHVFSARPSRMLLGAPPEVRGVNLIAQRRSAHPPIPPSVWLAAHYDSKGQPI
Ga0137334_10190691	3300012179	Soil	VTDYGVLFRELAVPRLVGTPNHQKVRATLIRELEARGFTVERHAFSGRPARALFGAPAVIAGTNLIAHRPSGRPTVRPSVWLVAHYDSKGQPISMLVRLLGVGLLVLGLPALLVDCMAAIVALG
Ga0137382_100845781	3300012200	Vadose Zone Soil	VTDYGQLFRELAIPRLVGTPNHQKVREILKRELGARGFAVEEQAFAGKPSRAFFGVPSLVHGVNLIARPIHPSAHPPIWLVAHYDSKGQPISMALRLIGFGALVLGLVML
Ga0137399_104009461	3300012203	Vadose Zone Soil	VTDLKGLVRALAVPRLVGTPNHTQVRERLKSELTARGFAVEEHVFAGRPSWLLLGTPAVVRGVNLIGRRPTAQPPNRPKVWLAAHYDSKGQP
Ga0137399_107660352	3300012203	Vadose Zone Soil	VTDYGLVFRELAVPRLSGTANHQRVREVLKRELAARGFAIAEHRFTGRPARALFGTPREVHGINLIAERPSGRPTVRPSIWLVAHYDSKGQPISMAVRLIGFFALLAGLVGLIVSTIPALALLLVGLSIVFQNRVNDNSP
Ga0137380_101517971	3300012206	Vadose Zone Soil	LCAVTDYAVLFRELALPRLVGTPNHRKVREILKRELSARGFVVDEHQFTGRPARALLGTPRLVEGTNLIAHRPSDRPAVRPSVWLVAHYDSKGQPIAMLLRLLGVFSTLGAMIGFFFAVG
Ga0137381_115322182	3300012207	Vadose Zone Soil	VTDYGVLFRELAIPRLVGSVNHAKVREILKRELAARGFRIEEHAFAGRPSRALFGAPRQVNGINLIAMRSQAEAERTWLVAHYDSKGQPISMAVRLLGFLGLASGVVGLLLAP
Ga0137376_100368321	3300012208	Vadose Zone Soil	VTDYGVLFRALAISRLAGTPNHEKVREILKRELEARAFSVEQHAFSGRPARVLLGAPRVVHGINLIARPSGRPAVRPSVWLVAHYDSKGQPISMAVRLLGFGALLIGLIGLLFAPP
Ga0137378_100763754	3300012210	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTANHQRVREILKRELAARGFAIDEHRFTGRPARALLNTPRVVEGINLIAQRPSGRPAVRPSVWLVAHYDSKGQPISMAVRLVGFFTLLAGLLGIFISTVPAVALLLVGLSI
Ga0137370_100453563	3300012285	Vadose Zone Soil	VTDYGVLFRELAVPRLVGTPNHKTVRNALKRELQARGFDVEEHAFTGRPARALLGVPRQVSGANLIATHPCARPPPRPPVWPVATY
Ga0137369_100357191	3300012355	Vadose Zone Soil	VTDYTLLFRELAVPRLIGTANHQRVREVLKRELTARGYAVEEHAFSGRPARALLGVPRTISGVNLIARPIRPSAHQPVWLVAHYDSK
Ga0137375_101301251	3300012360	Vadose Zone Soil	VTDYTLLFRELAVPRLVGTANHQKARGVLKRELTARGYAVEEHAFSGRPARALLGVPRTISGVNLIARPIRPSAHQPVWLVAHYDSKGQPISMAIRLIGFAALLLGLITLFFAKLPAIV
Ga0137361_103480053	3300012362	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTPNHQKVREVLKRELTARGFAALEHRFFRRPSNAFWGFHAPIDGINLIAQRPSGHPPVRPTVWLVAHYDSKGQPISMFTRLLCVVTVLVGLLT
Ga0137358_106657531	3300012582	Vadose Zone Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELTARGYAVEEHAFSGRPARALLGVPRTISGLNLIARPVRPSAHQPVWLVAHYDSKGQPISMAIRL
Ga0137394_106181001	3300012922	Vadose Zone Soil	VTDYGVLFRELAVPRLVGTPNHKTVRNALKRELQARGFDVEEHAFTGRPARALLGVPRQVSGANLIATRPSARPPARPPVWLVAHYDSKGQPISMWARLVGFLALAIGL
Ga0137394_107024062	3300012922	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTANHQKVREVLKRELAARGFAVEEHAFSGRPARALMGVPRTVSGVNLIGRPIGPSAHPSVWLVAHYDSKGQPISMAVR
Ga0137394_113643152	3300012922	Vadose Zone Soil	VTDYALLFRELAVPRLVGTPNHRTVREVLKRELIARGFAIQEHAFSGRPARALLGTPKRISGINLIGQRAGPPAVWLVAHYDSKGQPVSMLVRL
Ga0137416_100349301	3300012927	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTANHQKVREVLKRELVARGFAIEEHRFTGRPARALLGTPAVVEGTNLIAQRPSGRPAVRPSVWLVAHYDSKGQPISMAVRLVGFFALLAGLVAMLFTMIPALAL
Ga0137416_109879661	3300012927	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTSNHQKVREVLKRELAARGFAVEEHAFSGRPARALLGVPRTISGVNLIARPVRPSAHRPVWLVAHYDSKGQPISMAIRLVGFAALLLGLATLFLATLPALVLLIVAVVIVSQNRVN
Ga0137404_101129691	3300012929	Vadose Zone Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELTARGYAVEEQAFSGRPARALLGVPRTISGVNLIARPIRPSAHQPVWLVAHYDSKGQPISMAIRLVGFAALLLGLITLFFAKLPAIVLLAVAVVIVSQNRVNDNSAGAVDNATALVAI
Ga0137404_114193842	3300012929	Vadose Zone Soil	VTDYSVLFRELAVPRLVGTANHQRVREILKRELAARRFAVEEHAFSGRPARALLGVRRTISGINLIARPSDRPAVRPSVWLVAHYDSKGQPISMVI
Ga0137410_104802252	3300012944	Vadose Zone Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELAARGFVVSEHQFMGRPSRALFGTPSQVHGVNLIAARPSGRQTVRPSIWLVAHYDSKGQPISMAIRLVGFAAL
Ga0134077_100147551	3300012972	Grasslands Soil	LCAVTDYGVLFRELAIPRLVGSVNHAKVREILKRELAARDFSVEEHAFTGRPSSALFGTPRVISGVNLIARPAVPSPRPVVWLVAHYDSKGQPISMAL
Ga0134075_102362812	3300014154	Grasslands Soil	VRSYAVTDYAVLFRELAIPRLVGTPNHQRVREILKRELIARGFSVEEHVFSGRPARALLGVPSAVNGTNLIGTRAVGPSGRPAVWLVAHYDSKGQPISMAVRLVGFAALLVGLLVVVLAPLPGLALLAAGT
Ga0157380_134694291	3300014326	Switchgrass Rhizosphere	VTDYGVLFGELAVPRLVGTPNHTKVREILTRELEARGFSVEHHAFSIRPARALLGAPRLVSGINLIAQRAVRPSTWLVAHYDSKGQPISMWVRLAGFTLLV
Ga0137411_11966883	3300015052	Vadose Zone Soil	VTDYGLLFRELAVPRLVGTANHQRVREVLKRELVTRGFAIEEHRFSGRPARALLGTPAVVEGTNLIAQRPSGRPASRPSVWLVAHYDSKGQPISMAVRLVGFFALLAGLVAMLFTMIPA
Ga0137403_100158461	3300015264	Vadose Zone Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELTARGYAVEEQAFSGRPARALLGVPRTISGVNLIARPIRPSAHQPVWLVAHYDSKGQPISMAIRLVGFAALLLGLITLFFAKLPAILLLAVAVVIVSQNRVND
Ga0132258_100554981	3300015371	Arabidopsis Rhizosphere	VTDYGELFRELAIPRRVGTPNHQKVREILKRELQIRGFSIDEHLFEGRPSRAFFGAPRIVQGVNLIASRQPDRQTVRPSVWLVAHYDSKGQPISMAVRLIGFGLLV
Ga0132255_1026832351	3300015374	Arabidopsis Rhizosphere	VTDYGVLFGELAVPRLVGTPNHTKVREILTRELEARGVSVEHHAFSIRPARALLGTPRLVSGINLIAQRAVRPSIWLVAHYDSKGQPISMWVRLAGVTLLALGALLFLLNAIAAVVTLALGLAIVTQNR
Ga0134069_13263442	3300017654	Grasslands Soil	MRSYAVTDYAVLFRELAIPRLVGTPNHQRVREILKRELIARGFSVEEHVFSGRPARALLGVPSAVNGTNLIGTRAVGPSGRPAVWLVAHYDSKGQPISMAVRLVGFAALLVGLLVVVLAPLPGLALLA
Ga0134112_100417521	3300017656	Grasslands Soil	VTDYGLLFRELAVPRLAGTPNHQKVREVLKRELAARGLAVKEHAFSGRPSQAFLGTPRLVSGVNLIARPIDPSTHPPIWLVAHYDSKGQPISMFTRL
Ga0134074_10416623	3300017657	Grasslands Soil	VTDYTLLFRELAVPRLVGTANHQKAREVLKRELAARGFVVDEHQFMGRPARVLFGTPSQVRGVNLTAVRPSGRPAVRPSVWLVAHYDSKGQPISMAIRLIGFAALVLGLITLFLVKLLAI
Ga0134074_13446362	3300017657	Grasslands Soil	VTDYGVLFRELAIPRLVGTSNHQRVRETLKRELIARGFTVEEHVFSGRPARALIGAPRVVSGTNLIARRPSDRPTARPPVWLVAHYDSKG
Ga0134074_14013852	3300017657	Grasslands Soil	VTDYAVLFRELAVPRLVGTANHQKVRAVLTRELAARGFAVEEHLFSGRPTRALLGVPHAIAGINLIAPPIGSSARRPIWLVAHYDSKGQPISMAVRLVAAVVLLAGVVGMLVGAIPAF
Ga0184610_11803231	3300017997	Groundwater Sediment	VTDYATLLRELAVPRLVGTPNHRRVREVLKRELAARGYSVEEHEFSGRPSRALFGTPSVVHGINLIATRPSGRPTVRPSVWLVAHYDSKGQPISM
Ga0184610_11823332	3300017997	Groundwater Sediment	VTDYTLLFRELAVPRLVGTPNHQKVREILKRELTARGFAVEDHAFSGRPARALLGVPRTVSGVNLIARPIRPSAHQPVWLVAHYDSKGQPISMSIRLIGFAALLLGLITLFFATLPAIVLLAVAVVIVSQNRVNDNSAGAVD
Ga0184623_103732181	3300018056	Groundwater Sediment	VTDYAALLRELAVPRLVGTPNHAQVRERLKHELTARGYAVEEHAFAGRPSRMLFGTPPVVHGVNLIAQRAAARPSIWLAAHYDSKGQPIS
Ga0184640_102958192	3300018074	Groundwater Sediment	VTDYATLLRELAVPRLVGTPNHRRVREVLKRELAARGYSVEEHEFSGRPSRALFGTPSVVHGINLIATRPAGRPTVRPSVWLVAHYDSKGQPISMALRLAGAAALVVGAAGFVVALAAGWPVLPALALAVLG
Ga0184640_103668191	3300018074	Groundwater Sediment	VTDYAALLRELAVPRLVGTPNHDRVREILKRELAARGFTVEEQAFEGRPSRMLFGSPRLVQGVNLIGTRPSGRPAVRPSVWLVAHYDSKGQPISMALRLAGAIALAAGV
Ga0137408_10074542	3300019789	Vadose Zone Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELTARGYAVEEQAFSGRPARALLGVPRTISGVNLIARPIRPSAHQPVWLVAHYDSKGQPISMAIRLVGFAALLLGLITLFFAKLPAIVLLAV
Ga0210378_1000199213	3300021073	Groundwater Sediment	VTDSAALLRALAIPRLVGTPNHGRVRDLLKRELEARGFAAEEHAFSARPSRLLLGTPNLVHGVNLIAIHPSARPPVRPSVWLAAHYD
Ga0210378_100651963	3300021073	Groundwater Sediment	VTDYGVLFRELAVPRLVGTPNHRKVRELLARELGARGFSVEEHAFSGRPARMLFGTPRKIAGINLIARRPPVRPSGRPPVWLVAHYDSKGQPVSMLVRLIGFLSLVIGLVWLPLGGSTLPIIPLALGFSILFHNRVTDNSPGAVD
Ga0210382_102854322	3300021080	Groundwater Sediment	VTDYTLLFRELAVPRLVGTPNHQKVREILKRELTARGFAVEDHAFSGRPARALLGVPRTISGVNLIARPIRPSAHQPVWLVAHYDSKGQPISMAIRLIGFAALLLGLITLFFAKLPAIVLLAVAVVIVSQ
Ga0210379_101135371	3300021081	Groundwater Sediment	VPRLVGTSNHQKVREILNRELAARGLVVEAHAFTGRPARALFGTPRVVHGVNLIAQRSQAKVWLVAHYDSKGQPISMAVRL
Ga0247673_10728362	3300024224	Soil	MRSCAVTDYAELFRELAVPRLVGTANHQKVREILKRELAARGFAVEEHAFAGRPSRAFFGAPSVVNGINLIAERPSGRPTVWLVAHYDSKGQPISMALRLIG
Ga0137417_11364173	3300024330	Vadose Zone Soil	VTDYALLFRELAVPRLVGTPNHRTVREVLKRELAARGFSVEEHAFSGRPARALLGTPKLISGINLIAQRGRSAVWLVAHYDSKGQPVSMWARLVGFLALVIGLVWWPFAGGETWFVIPLAMGLSVLLLNRVTDKSA
Ga0209751_109112911	3300025327	Soil	VTDYGVLFRELAVPRLVGTPNHRKVRELLARELVARGFSVEEHAFAGRPARALLGVPREIRGVNLIARAGGPSGRPSVWLVAHYDSKGQPVSMLVRLIGFLSL
Ga0207686_113161681	3300025934	Miscanthus Rhizosphere	VTDYGVLFGELAVPRLVGTPNHTKVREILTRELEARGFSVEHHAFSIRPARALLGAPRLVSGINLIAQRAVRPSTWLVAHYDSKGQPISMWVRLAGFTLLGAGLTVLRGRRPLGGDVEHR
Ga0207665_106070582	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTDYAVLFRELAIPRLAGTPNHQKVREILKRELMARGFSIEEQAFSGRPARALLGTPRVVAGTNLIAERLSGGPTVRPSVWLVAHYDSKGKPISMAVRLVGFFALLLGLFTFFVALLPALAILAVAFVIVSQNRVTDN
Ga0207708_100501351	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRSSAVTDYGVLLTELAVPRLVGTPNHTKVREILTRELQARGFSVEEHAFAVRPARALLGTPRTVSGVNLIGRRAGRSAVWLVAHYDSKGQPI
Ga0209470_10659973	3300026324	Soil	VTDYGVLFRALAISRLAGTPNHEKVREILKRELEARGFSVEQHAFSGRPARALLGAPRVVHGINLIARPSGRQAVRPSVWLVAHYDSKGQPISMAVRLLGF
Ga0209375_10204485	3300026329	Soil	VTDYAVLFRELAIPRLVGTPNHQRVREILKRELIARGFSVEEHVFSGRPARALLGVPSAVNGTNLIGTRAVGPSGRPAVWLVAHYDSKGQPISMAVRLVGFAA
Ga0209159_12906361	3300026343	Soil	VTDYTLLFRELAVPRLVGTANHQKVREVLKRELAARGFVVAEHAFSGRPARVLLGVPRTISGVNLIARPIRPSAHPPVWLVAHYDSKGQPISMAIRLIGFAALVLGLITLFFVKLPAIVLLAVAVVIVSQNRVNDNSPGAVDNATALV
Ga0209160_11616251	3300026532	Soil	VTDYGVLFRELAIPRLVGSVNHAKVREILKRELAARGFRIEEHAFAGRPSRALFGAPRQVNGINLIAIRSQAEAERTWLVAHYDSKGQPI
Ga0209161_101752391	3300026548	Soil	VTDYAVLFRELAIPRLVGTPNHRKVREILKRELSARGFVVDEHQFTGRPARALLGTPRLVEGTNLIAHRPSDRPAVRPSVWLVAHYDSKGQPIAMLLRLLGVFSTLGAMIGFFFAVGPALVLLAIGALILSQNRV
Ga0209074_100596311	3300027787	Agricultural Soil	VTDYAELFRELAVPRLVGTVNHQKVREILKRELAVRGFAVEERAFSGRPARALLGTPKLVSGINLIAQRAVRPSGHPAVWLVAHYDSKGQPISMALRLIGFGVLAVGVLALLAALIPALVLLAVALIIVSQNRVTDD
Ga0209488_106117291	3300027903	Vadose Zone Soil	VRSCAVTDYAVLFRELAVPRLVGTANHQIVRDVLKRELAARGFSVEEHPFSGRPARALLGTPRMVSGINVIGRPNGRTAGRPNIWLV
Ga0209382_110361481	3300027909	Populus Rhizosphere	LDLAGLLHALAVPRLVGTPNHTQVRERLKRELSALGFSVDEHVFAGRPSWMLLGTPDVVRGINLIASRPPNGPSAHPPIWLAAHYDSKGQPISMATRI
Ga0137415_108027132	3300028536	Vadose Zone Soil	LLFRELAVPRLVGTSNHQKVREVLKRELAARGFAVEEHAFSGRPARALLGVPRTISGVNLIARPVRPSAHRPVWLVAHYDSKGQPISMAIRLVGFAALLLGLATLFLATLPALVLLIVAVVIVSQNRVN
Ga0307292_102974192	3300028811	Soil	VRSCAVTDYAVLFRELAVPRLVGTANHQKVREVLKRELAARGFATEEHRFAGRPARALLGTPREVQGINLIAVRPSGRPTVRPSVWLVAHYDSKGQPISMAIRLIGVAALLLGLITLFVAKLPAIVFLAVAVVIVSQNRVHDNSPGAVDNATALV
Ga0307296_100224364	3300028819	Soil	VTDSAALLRALAIPRLVGTPNHAQVRERLKHELTARGFAVEEHAFSGRPSRMLLGTPSVIRGVNLIAQRGRPSIWLAAHYDSKGQPISMATRIVGAS
Ga0307278_1000278911	3300028878	Soil	VVTDYSVLFRELAVPRLVGTPNHQKVREVLKRELAARGFAVLEHRFFRRPSNAFWGFHAPIDGINLIAQRPSGRPTVRPAIWLMAHYDSKGQPISMLTRLLCVVT
Ga0307497_104331092	3300031226	Soil	VTDYGQLFRELAIPRLVGTPNHQKVREILKRELGARGFAVEEQAFAGKPSRAFFGVPSLVHGVNLIARPIHPSAHPPIWLVAHYDSKGQPISMALRLIGFGALVLGLVMLLVAIIPAAAI
Ga0307469_101466341	3300031720	Hardwood Forest Soil	VTDYGVLFRELAIPRLVGTPNHQKVRDVLKRELSARGFAVEEHAFSGRPARALLGAPRVVHGINLLGRPSNRPTVQPSIWLVAHYDSKGQPISMALRLLGFGVLLIGLAALLFAAVPALVLVALGASIALLNRGT
Ga0364946_072993_2_415	3300033815	Sediment	VTDYSELFRALAVPRLVGTPNHQQVREILKRELAARGFAVEEHAFTGRPARALFGTPREVHGVNLIARQSLSLRTASAEPTLEGGRIWLVAHYDSKGQPISMAVRLVGFLALVVGLLGLLLTPVPAIALLLIAVAIIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073298

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences