Metagenome Family F073211

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073211
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	123 residues
Representative Sequence	MRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKH
Number of Associated Samples	107
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.19 %
% of genes near scaffold ends (potentially truncated)	38.33 %
% of genes from short scaffolds (< 2000 bps)	72.50 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.333 % of family members)
Environment Ontology (ENVO)	Unclassified (36.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.86% β-sheet: 0.00% Coil/Unstructured: 64.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF12850	Metallophos_2	40.83
PF08281	Sigma70_r4_2	10.00
PF00069	Pkinase	9.17
PF01435	Peptidase_M48	5.00
PF11950	DUF3467	1.67
PF00781	DAGK_cat	0.83
PF00586	AIRS	0.83
PF00121	TIM	0.83
PF02800	Gp_dh_C	0.83
PF07885	Ion_trans_2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	36.67
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.67
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.83
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.33 %
Unclassified	root	N/A	26.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.33 %
Unclassified	root	N/A	26.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.33 %
Unclassified	root	N/A	26.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.67 %
Unclassified	root	N/A	26.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	12.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.67 %
Unclassified	root	N/A	26.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	12.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	12.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.50 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.67 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	12.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.33 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.67 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.67 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.67 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.67 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.67 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.83 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10799341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300004081\|Ga0063454_100574915	Not Available	816	Open in IMG/M
3300004479\|Ga0062595_101465578	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300004479\|Ga0062595_102455088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300005330\|Ga0070690_100276873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1196	Open in IMG/M
3300005332\|Ga0066388_106446379	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005334\|Ga0068869_100510251	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300005337\|Ga0070682_100278848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300005347\|Ga0070668_100431547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300005353\|Ga0070669_100070938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2576	Open in IMG/M
3300005356\|Ga0070674_100577589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	947	Open in IMG/M
3300005439\|Ga0070711_100421869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1087	Open in IMG/M
3300005457\|Ga0070662_100059095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2792	Open in IMG/M
3300005536\|Ga0070697_101737828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300005543\|Ga0070672_100453893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1104	Open in IMG/M
3300005545\|Ga0070695_100471042	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005713\|Ga0066905_100427213	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005764\|Ga0066903_100359163	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300005764\|Ga0066903_100360293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2359	Open in IMG/M
3300005842\|Ga0068858_100432897	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300005844\|Ga0068862_102119239	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005937\|Ga0081455_10005223	All Organisms → cellular organisms → Bacteria	14283	Open in IMG/M
3300005983\|Ga0081540_1003239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12961	Open in IMG/M
3300005983\|Ga0081540_1025164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3433	Open in IMG/M
3300006058\|Ga0075432_10027464	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300006845\|Ga0075421_100254227	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300006845\|Ga0075421_101475216	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006854\|Ga0075425_100277181	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300006880\|Ga0075429_101480633	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300006914\|Ga0075436_100277515	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300007076\|Ga0075435_100046365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3486	Open in IMG/M
3300009093\|Ga0105240_10477267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1391	Open in IMG/M
3300009094\|Ga0111539_10145662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2773	Open in IMG/M
3300009098\|Ga0105245_10036696	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300009098\|Ga0105245_10939335	Not Available	907	Open in IMG/M
3300009147\|Ga0114129_12908057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300009162\|Ga0075423_10180913	Not Available	2213	Open in IMG/M
3300009174\|Ga0105241_10805715	Not Available	866	Open in IMG/M
3300009176\|Ga0105242_10176770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1880	Open in IMG/M
3300009553\|Ga0105249_10296222	Not Available	1621	Open in IMG/M
3300009840\|Ga0126313_10054094	All Organisms → cellular organisms → Bacteria	2841	Open in IMG/M
3300010044\|Ga0126310_10494921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	892	Open in IMG/M
3300010362\|Ga0126377_10101542	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300010362\|Ga0126377_10590578	Not Available	1154	Open in IMG/M
3300010375\|Ga0105239_10100699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3196	Open in IMG/M
3300010375\|Ga0105239_10970325	Not Available	977	Open in IMG/M
3300012896\|Ga0157303_10016468	Not Available	1194	Open in IMG/M
3300012899\|Ga0157299_10012531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1469	Open in IMG/M
3300012901\|Ga0157288_10001379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2970	Open in IMG/M
3300012902\|Ga0157291_10027990	Not Available	1188	Open in IMG/M
3300012908\|Ga0157286_10003020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2771	Open in IMG/M
3300012911\|Ga0157301_10002103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3352	Open in IMG/M
3300012912\|Ga0157306_10012431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1689	Open in IMG/M
3300012951\|Ga0164300_10066808	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300012951\|Ga0164300_10876832	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300012958\|Ga0164299_10922358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300012985\|Ga0164308_11383061	Not Available	642	Open in IMG/M
3300012986\|Ga0164304_10271428	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012988\|Ga0164306_11134907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300012989\|Ga0164305_11018222	Not Available	705	Open in IMG/M
3300013096\|Ga0157307_1033224	Not Available	906	Open in IMG/M
3300013297\|Ga0157378_10970745	Not Available	883	Open in IMG/M
3300013306\|Ga0163162_12917277	Not Available	550	Open in IMG/M
3300017792\|Ga0163161_11103855	Not Available	682	Open in IMG/M
3300018465\|Ga0190269_10155759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1188	Open in IMG/M
3300019361\|Ga0173482_10049231	Not Available	1362	Open in IMG/M
3300019362\|Ga0173479_10008706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2556	Open in IMG/M
3300022756\|Ga0222622_10765956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300022883\|Ga0247786_1000788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5705	Open in IMG/M
3300022886\|Ga0247746_1008346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2086	Open in IMG/M
3300022889\|Ga0247785_1009496	Not Available	995	Open in IMG/M
3300022892\|Ga0247753_1028863	Not Available	653	Open in IMG/M
3300022898\|Ga0247745_1001696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2883	Open in IMG/M
3300022915\|Ga0247790_10005379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2492	Open in IMG/M
3300023057\|Ga0247797_1026190	Not Available	773	Open in IMG/M
3300023066\|Ga0247793_1004676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1852	Open in IMG/M
3300023102\|Ga0247754_1032156	Not Available	1183	Open in IMG/M
3300025899\|Ga0207642_10075468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1619	Open in IMG/M
3300025903\|Ga0207680_10378191	Not Available	998	Open in IMG/M
3300025914\|Ga0207671_10549431	Not Available	921	Open in IMG/M
3300025917\|Ga0207660_10274884	Not Available	1335	Open in IMG/M
3300025921\|Ga0207652_10329439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1379	Open in IMG/M
3300025923\|Ga0207681_10099454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2095	Open in IMG/M
3300025927\|Ga0207687_10162719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1714	Open in IMG/M
3300025927\|Ga0207687_10470869	Not Available	1045	Open in IMG/M
3300025928\|Ga0207700_11683783	Not Available	560	Open in IMG/M
3300025933\|Ga0207706_10022649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5639	Open in IMG/M
3300025940\|Ga0207691_10437276	Not Available	1114	Open in IMG/M
3300025972\|Ga0207668_10116391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2016	Open in IMG/M
3300025986\|Ga0207658_11546020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300026023\|Ga0207677_10389224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1179	Open in IMG/M
3300026035\|Ga0207703_10863943	Not Available	865	Open in IMG/M
3300026118\|Ga0207675_100387312	Not Available	1375	Open in IMG/M
3300027821\|Ga0209811_10093160	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300027907\|Ga0207428_10011913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7656	Open in IMG/M
3300027907\|Ga0207428_10210838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1459	Open in IMG/M
3300027909\|Ga0209382_10106375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3282	Open in IMG/M
3300027909\|Ga0209382_11789056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300028380\|Ga0268265_12385787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300028596\|Ga0247821_10336090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	929	Open in IMG/M
3300028596\|Ga0247821_10710284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300028707\|Ga0307291_1005389	All Organisms → cellular organisms → Bacteria	2731	Open in IMG/M
3300028714\|Ga0307309_10023047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1226	Open in IMG/M
3300028720\|Ga0307317_10061104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1219	Open in IMG/M
3300028744\|Ga0307318_10006909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3668	Open in IMG/M
3300028768\|Ga0307280_10001058	All Organisms → cellular organisms → Bacteria	6466	Open in IMG/M
3300028778\|Ga0307288_10032689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1726	Open in IMG/M
3300028782\|Ga0307306_10010525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1975	Open in IMG/M
3300028784\|Ga0307282_10585245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300028799\|Ga0307284_10404058	Not Available	556	Open in IMG/M
3300028885\|Ga0307304_10017247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2385	Open in IMG/M
3300030336\|Ga0247826_10641492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300030336\|Ga0247826_10947394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300031547\|Ga0310887_10213634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1057	Open in IMG/M
3300031996\|Ga0308176_11869770	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300032002\|Ga0307416_100965011	Not Available	955	Open in IMG/M
3300032013\|Ga0310906_10238491	Not Available	1128	Open in IMG/M
3300032126\|Ga0307415_102049567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300034817\|Ga0373948_0013553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1474	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.83%
Host-Associated	Host-Associated	44.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.00%
Plants	Host-Associated → Plants	44.17%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.83%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.33%
Loam	Environmental → Terrestrial → Soil → Loam	11.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.50%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_107993412	3300001686	Soil	MRWRNGLLTASSVLLLAGCGDGQKQQAAPPKLPKIPSGVASRLAAEADQVGALTPGSCEARDAAARFRSDVIASIGSVPARYREPLTSAANSLAERLATC
Ga0063454_1005749151	3300004081	Soil	MRWRNGLLTASSVLLLAGCGDGQKQQAAPPKLPKIPSGVASRLAAEADQVGALTPGSCEARDAAARFRSDVIASIGSVPARYREPLTSAANSLAERLATCVEPKPEPQPKP
Ga0062595_1014655782	3300004479	Soil	MRWRNGLLTASSALLLAGCGGEHRATPPPPPRIPADVASRLAVEADRVAALSPGTCEARDAAARFRQDVIASIGRIPARYREPLTSAANALAERLATCVEPKPNPRKSKRHHGHHHDEEP
Ga0062595_1024550881	3300004479	Soil	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKEDR
Ga0070690_1002768732	3300005330	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0066388_1064463792	3300005332	Tropical Forest Soil	MRWRSGLLTASSALLLAGCGGGDRAAPPPKPPRIPGGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRIPPRYQEPLMSAANSLVDRLAACVAPQPVEPEHGKGHGKKKHDGDDND
Ga0068869_1005102512	3300005334	Miscanthus Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPEPPRIPARVVQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHG
Ga0070682_1002788483	3300005337	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEVRDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKE
Ga0070668_1004315472	3300005347	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARFQEPLTSAANTLAERLATCVERKPEHGK
Ga0070669_1000709381	3300005353	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPE
Ga0070674_1005775892	3300005356	Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGEGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0070711_1004218691	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PMGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0070662_1000590951	3300005457	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHG
Ga0070697_1017378282	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVE
Ga0070672_1004538932	3300005543	Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHRKENRKKHRGKGH
Ga0070695_1004710422	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPARVVQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPAHGKGHGKKHGRKKHDGDNQGGGEGEG*
Ga0066905_1004272132	3300005713	Tropical Forest Soil	MRWRSGLLTASSALLLAGCGGGDHTAPPPKPPRIPAGVAQQLAAQADRVATLTPGTCEARDAAARFRGQVIASIGRIPPRYQEPLMSAANSLADRLATCVAPPPVEPEHGKGHGRKHGKKKHGGDDDQG*
Ga0066903_1003591632	3300005764	Tropical Forest Soil	MRWRSGLLTASSALLLAGCGGGDGAAPPPKPPRIPGGVAQQLATEADHVATLTPGTCEARDAAARFRAHVIASIGKVPPRYQEPLMSAANSLADRLAACVAPQPVEPEHGKGHGKKKHDGDDNDQG*
Ga0066903_1003602932	3300005764	Tropical Forest Soil	MRWRSGLLTASSAFLLAGCGGGDRAAPPPRPPRIPGGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRIPPRYQEPLMSAANSLADRLAACVEPQPIEPEHGKGHGKGHGKKKHDGDNQGEGDGEG*
Ga0068858_1004328972	3300005842	Switchgrass Rhizosphere	MGWRIALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0068862_1021192391	3300005844	Switchgrass Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPAGVARQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALAERLTACVEPQPVESG
Ga0081455_1000522313	3300005937	Tabebuia Heterophylla Rhizosphere	MRWRSGLLTASSALLLAGCGGGDHAAPPPKPPRIPAGVAQQLAAEADHVATLTPGTCEARDAAAGLRSHVIASIGRIPPRYQEPLMSAANALADRLAACVEPPPAEPEHGKRHGKKHERKKHGHDDDQGDG*
Ga0081540_10032394	3300005983	Tabebuia Heterophylla Rhizosphere	MRWRSALLTASSAFVLAGCGGADHASPPPKPPRIPAGVAQQLSAEADRVAMLTPGTCEARDAAARFRGHVIASIGRIPPRYQEPLMSAANSLADRLAACVEPRPVEPEHGKGHDRKHGRTKHDHDEGNGEQGNG*
Ga0081540_10251644	3300005983	Tabebuia Heterophylla Rhizosphere	SARRLRFAKGGCPIRWRSGLLTASSALLLAGCGGGDRAAPPPKPPRIPAGVARQLAAEADRVATLTPGTCEARDAAARFRGHVIASIGRIPPRYQEPLMSAANSLADRLATCVAPPPVEPEHGEGHGRKHGKKKHDGDDDGQG*
Ga0075432_100274642	3300006058	Populus Rhizosphere	MRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGHGDG*
Ga0075421_1002542272	3300006845	Populus Rhizosphere	VRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGHGDG*
Ga0075421_1014752162	3300006845	Populus Rhizosphere	MRWRNGLLTVSSALVLAGCGGGEHRAAPQPRPPRIPADVASRLAAEADRVAALTPGTCEARDAAARFRQDVIASIGRVPPRYQEPLTSAANTLAARLATCVEPKPDHGHEDRDGRHHEKRHRGGGEGND*
Ga0075425_1002771811	3300006854	Populus Rhizosphere	MRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKH
Ga0075429_1014806332	3300006880	Populus Rhizosphere	MRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDGDNKGDGEG*
Ga0075436_1002775152	3300006914	Populus Rhizosphere	MRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGDGEG*
Ga0075435_1000463653	3300007076	Populus Rhizosphere	MRWRRGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGHGDG*
Ga0105240_104772672	3300009093	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKTEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0111539_101456622	3300009094	Populus Rhizosphere	LLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGHGDG*
Ga0105245_100366965	3300009098	Miscanthus Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPARVVQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDGDNQGRGEGEG*
Ga0105245_109393352	3300009098	Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHPGKGHKGDD*
Ga0114129_129080571	3300009147	Populus Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPAGVAQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEP
Ga0075423_101809132	3300009162	Populus Rhizosphere	MRWRSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGDGEG*
Ga0105241_108057151	3300009174	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGGGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEVRDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0105242_101767702	3300009176	Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHRKENRKKHRGKGHKGDD*
Ga0105249_102962222	3300009553	Switchgrass Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPARVVQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPAHGKGHGKKHGRKKHDGDNQGRGEGEG*
Ga0126313_100540943	3300009840	Serpentine Soil	MRWRSGLLTASSALLLTGCGGGDHAAPPPKPPRIPAGVAQQLAAEADRVATLTPGTCEARDAAATFRAHVIGSIGRIPPHYQEPLMSAANSLVDRLAACAEPRPVEPEHDNGHGKKHGKKKHDDEGNEGHG*
Ga0126315_104787132	3300010038	Serpentine Soil	APPPKPPRIPAGVAQQLAAEADRVATLTPGTCEARDAAATFRAHVIGSIGRIPPHYQEPLMSAANSLVDRLAACAEPRPVEPEHDNGHGKKHGKKKHDDEGNEGHG*
Ga0126310_104949212	3300010044	Serpentine Soil	LLTASSALLLTGCGGGDHAAPPPKPPRIPAGVAQQLAAEADRVATLTPGTCEARDAAATFRAHVIGSIGRIPPHYQEPLMSAANSLVDRLAACAEPRPVEPEHDNGHGKKHGKKKHDDEGNEGHG*
Ga0126377_101015423	3300010362	Tropical Forest Soil	MRWRSGLLTASSALLLAGCGGGDHTSPPPRPPRIPAGVAQQLAAEADRVAALTPGTCEARDAAVRFRGNVIASIGRIPSRYQEPLMSAANSLADRLAACVQPRVEPKHGKGHGKKHGRKKNGGGDDNDQGNG*
Ga0126377_105905781	3300010362	Tropical Forest Soil	RMRWRSGLLTASSALLLAGCGGGDHTAPPPKPPRIPAGVAQQLAAQADRVATLTPGTCEARDAAARFRGQVIASIGRIPPRYQEPLMSAANSLADRLATCVAPPPVEPEHGKGHGRKHGKKKHGGDDDQG*
Ga0105239_101006992	3300010375	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAAHFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0105239_109703252	3300010375	Corn Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDGDNQGGGEGEG*
Ga0157303_100164681	3300012896	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGDGDG*
Ga0157299_100125313	3300012899	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKH
Ga0157288_100013793	3300012901	Soil	MRWQSGLLTASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALAERLTACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG*
Ga0157291_100279901	3300012902	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALAERLTACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG*
Ga0157286_100030203	3300012908	Soil	MRWHSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG*
Ga0157301_100021033	3300012911	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG*
Ga0157306_100124313	3300012912	Soil	TASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADHVDTLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG*
Ga0164300_100668082	3300012951	Soil	MRWRSGLLTASSAALLAGCGGNGHQAQPPPKPPRIPAGVATRLAAEADRVAGMTPGTCAARDAANRLRRDVIASVGRLPARYQEPLTSAANTLAERLATCVEPKPDRHGRNDEKHRKHGHGHDG*
Ga0164300_108768322	3300012951	Soil	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEPGKENRKKHRGKGHKGDD*
Ga0164299_109223582	3300012958	Soil	MRWRNGLLTASSALLLAGCGDAHKASPPQRPPRIPAGVAARLAAEADRVAALTPGTCEARNAAIRFRNDVIASIGRVPARYQEPLSSAANSLAERLSSCVEPQKPQHEKRHGKKPHGHEHDGN
Ga0164308_113830611	3300012985	Soil	MRWRNGLLTASSALLLAGCGDAHKASPPQRPPRIPAGVAARLAAEADRVAALTPGTCEARDAAIRFRNDVIASIGRVPARYQEPLSSAANSLAERLSSCVEPQKPQHEKKRHDRKPHGHGHDGND*
Ga0164304_102714282	3300012986	Soil	MRWRNGLLTASSALLLAGCGDAHKASPPQRPPRIPAGVAARLAAEADRVAALTPGTCEARDAAIRFRNDVIASIGRVPARYQEPLSSAANSLAERLSSCVEPQKPQHEKRHGKKPHGHEHDGND*
Ga0164306_111349072	3300012988	Soil	MRWRNGLLTASSALLLAGCGDAHKASPPQRPPRIPAGVAARLAAEADRVAALTPGTCEARDAAIRFRNDVIASIGRVPARYQEPLSSAANSLAERLSSCVEPQKPQHEKRHGKKPHGHERDGND*
Ga0164305_110182222	3300012989	Soil	AGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHHGKGHKGDD*
Ga0157307_10332242	3300013096	Soil	MRWQSGLLTASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARVRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEG
Ga0157378_109707452	3300013297	Miscanthus Rhizosphere	TALLTVSSALLLAGCGDGKKAEPPPPLPRIPASVAAKLAAEADRVAALTPGSCEARDAAAHFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0163162_129172771	3300013306	Switchgrass Rhizosphere	AGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD*
Ga0163161_111038551	3300017792	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKEHRGKGHKGDD
Ga0190269_101557592	3300018465	Soil	MRWRSVLLTGSSALLLAGCGGSDNATPTPRPPRIPGDVAARLAGEAEAVARLTPGSCAARAAAIRFRSDVIASVGRIPSRYQEPLLSAANNLAESLATCTEPRREGKDHEKHGKKRGHKKHEDEQ
Ga0173482_100492311	3300019361	Soil	MRWQSGLLTASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0173479_100087064	3300019362	Soil	MRWHSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0222622_107659562	3300022756	Groundwater Sediment	MRWRNGLLTASSALLLAGCGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASIGSIPPRWQEPLTSAANSLAARLATCVQPEPKEHKPHHGYHKKHGEN
Ga0247786_10007886	3300022883	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0247746_10083463	3300022886	Soil	MRWHSGLLTASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0247785_10094962	3300022889	Soil	GGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0247753_10288631	3300022892	Soil	WQSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALAERLTACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0247745_10016963	3300022898	Soil	MRWHSGLLTASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALAERLTACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0247790_100053794	3300022915	Soil	MRWQSGLLTASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALAERLTACVEPSR
Ga0247797_10261901	3300023057	Soil	AGCGGGDQTAPPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0247793_10046761	3300023066	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALAERLTACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0247754_10321562	3300023102	Soil	MRWHSGLLTASSALLLAGCGGGDQTAHPPRPPRIPAGVAQQLATEADRVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVESGHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0207642_100754681	3300025899	Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD
Ga0207680_103781911	3300025903	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRK
Ga0207671_105494312	3300025914	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHRKENRKKHRGKGHKGDD
Ga0207660_102748842	3300025917	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKEDRKKHRGKGHKSDD
Ga0207652_103294391	3300025921	Corn Rhizosphere	AGCGGNGHQAQPPPKPPRIPAGVATRLAAEADHVAGMTPGTCAARDAANRLRSDVIASVGRLPARYQEPLTSAANDLAARLAACTPPQPKQPEHGHHGHGHGKKKGEGD
Ga0207681_100994541	3300025923	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEPG
Ga0207687_101627191	3300025927	Miscanthus Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPARVVQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0207687_104708691	3300025927	Miscanthus Rhizosphere	CGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD
Ga0207700_116837832	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AALLAGCGGNGHQAQPPPKPPRIPAGVATRLAAEADHVAGMTPGTCAARDAANRLRSDVIASVGRLPARYQEPLTSAANDLAARLAACTPPQPKQPEHGHHGHGHGKKKGEGD
Ga0207706_100226497	3300025933	Corn Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPDPQRDACPRSSYL
Ga0207691_104372761	3300025940	Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHRKENRKKHRGKGHK
Ga0207668_101163911	3300025972	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARFQEPLTSAANTLAERLATCVERKPEHGKENRKKHRGKGHKGDD
Ga0207658_115460201	3300025986	Switchgrass Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHRGDD
Ga0207677_103892243	3300026023	Miscanthus Rhizosphere	MGWRTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGH
Ga0207703_108639431	3300026035	Switchgrass Rhizosphere	LLAGCGDGKKAEPPPQLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD
Ga0207675_1003873122	3300026118	Switchgrass Rhizosphere	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPAGVAQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDGDNQGRGEGEG
Ga0209811_100931602	3300027821	Surface Soil	MRWRNGLLTASSALLLAGCGDAHKASPPQRPPRIPAGVAARLAAEADRVAALTPGTCEARNAAIRFRNDVIASIGRVPARYQEPLSSAANSLAERLSSCVEPQKPQHEKKRHDGKPHGHGHDGND
Ga0207428_100119133	3300027907	Populus Rhizosphere	MRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGHGDG
Ga0207428_102108381	3300027907	Populus Rhizosphere	GGCRMRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGDGEG
Ga0209382_101063753	3300027909	Populus Rhizosphere	VRWRSGLLTASSALLLAGCGGGDRTAPPPRPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDRDNQGHGDG
Ga0209382_117890562	3300027909	Populus Rhizosphere	MRWRNGLLTVSSALVLAGCGGGEHRAAPQPRPPRIPADVASRLAAEADRVAALTPGTCEARDAAARFRQDVIASIGRVPPRYQEPLTSAANTLAARLATCVEPKPDHGHEDRDGRHHEKRHRGGGEG
Ga0268265_123857872	3300028380	Switchgrass Rhizosphere	RTALLTVSSALLLAGCGDGKKAEPPPPLPRIPAGVAAKLAAEADRVAALTPGSCEARDAAARFRTDVIASIGRIPARYQEPLTSAANTLAERLATCVEPKPEHGKENRKKHRGKGHKGDD
Ga0247821_103360901	3300028596	Soil	MRWRTGLLTASSALLLAGCGGGDETAPPPKPPRIPAGVAQQLATEADHVATLTPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEAEHGKGHGKKHGRKKHDGDSQGDG
Ga0247821_107102841	3300028596	Soil	MRWRNGLLTASSALLLAGCGGVEHRATPPPPPRIPADVAARLATEADRVAALTPGTCEARDAAARFRQDVIASIARIPVRYQEPLTSAANTLAERLATCVEPKPENGKGHGKKRH
Ga0307291_10053891	3300028707	Soil	LTASSALLLAGCGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASISRIPPRWQEPLTSAANSLAARLATCVQPEPKEHKPHHGQHKKHGENE
Ga0307309_100230472	3300028714	Soil	MRWRNGLLTASSALLLAACGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASIGSIPPRWQEPLTSAANSLAARLATCVQPEPKEHKPHHGYHKKHGEN
Ga0307317_100611042	3300028720	Soil	LLTASSALLLAACGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASIGSIPPRWQEPLTSAANSLAARLATCVQPEPKEHKPHHGYHKKHGENE
Ga0307318_100069094	3300028744	Soil	MRWRSALLTGSSALLLAGCGDSDNATPTPRPPRIPGDVAARLAGEADAVARLTPGSCAARAAAIRFRSDVMASVGRIPSRYQEPLLSAANNLAESLATCTEPRREGKDHEKHGKKRGHKKHEDEQ
Ga0307280_100010586	3300028768	Soil	MRWRNGLLTASSALLLAGCGGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASIGSIPPRWQEPLTSAANSLAARLATCVQPEPKEHKPHHGYHKKHGENE
Ga0307288_100326892	3300028778	Soil	MRWRNGLLTASSALLLAGCGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASISRIPPRWQEPLTSAANSLAARLATCVQPEPKEHKPHHGYHKKHGEN
Ga0307306_100105253	3300028782	Soil	MRWRNGLLTASSALLLAACGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASIGSIPPRWQEPLISAANSLAARLATCVQPEPKEHKPHHGYHKKHGEN
Ga0307282_105852451	3300028784	Soil	MRWRSALLTGSSALLLAGCGDSDNATPTPRPPRIPGDVAARLAGEADAVARLTPGSCAARAAAIRFRSDVMASVGRIPSRYQEPLLSAANNLAESLATCTEPRREGK
Ga0307284_104040582	3300028799	Soil	LLAGCGGGHRAAPPPPPRIPAQDATRLAAEADRVAALAPGSCAARDAAVRLRSDVIVSVGRIPAEYQETLLSATNDLAERLAACTQPENTRKEHGKHEHRKKKHEGEG
Ga0307304_100172473	3300028885	Soil	MRWRNGLLTASSALLLAGCGGGHRATPPPRPPRIPADVASRLAAEAGRVAVLTPGTCEARDAAVRFRDDVIASIGSIPPRWQEPLTSAANSLAARLATCVQPEPKEHKPHHGQHKKHGEN
Ga0247826_106414922	3300030336	Soil	MGWRTGLLTVSSALLLAGCGGGHNAPPPAPLPRIPAGVAAKLADEADQVAALAPGSCEARDAAARFRTDVIASIGQIPARYQEPLTSAANTLAERLATCVEPKPRKRHKPHHENKHDQER
Ga0247826_109473942	3300030336	Soil	MRWRNGLLTASSALLLAGCGGVEHRATPPPPPRIPADVAARLATEADRVAALTPGTCEARDAAARFRQDVIASIARIPVRYQEPLTSAANTLAERLATCVEPKPENGKGHGKKRHGHEGDENQ
Ga0310887_102136341	3300031547	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPAGVAQQLATEADRVATLKPGTCEARDAAARFRSHVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHGKGHGKKHGRKKHDGDNQGGGEGEG
Ga0308176_118697702	3300031996	Soil	MRWRSGLLTASSALLFAGCGGGDHAEPPPKPPRIPAGVAQQLAAEADRVATLTPGTCEARDAAASFRAHVIASIGRIPPRYQEPLMSAANSLADRLAACVEPQPAEPEHDNGHGKKHGRKKHDDEGNGG
Ga0307416_1009650111	3300032002	Rhizosphere	MRWRSGLLTASSALLLAGCGGGGDAAPPPKPPRIPTGVAQQLAAEADRVATLTPGTCEARDAAAGFRAHVIGSIGRIPPRYQEPLMSAANSLVDRLAACAEPRPVEPE
Ga0310906_102384911	3300032013	Soil	MRWQSGLLTASSALLLAGCGGGDQTAPPPKPPRIPAGVAQQLATEADRVATLKPGTCEARDAAARFRSNVIASIGRVPPRYQEPLMSAANALADRLAACVEPQPVEPEHG
Ga0307415_1020495672	3300032126	Rhizosphere	MRWRSGLLTASSALLLTGCGGGDHAAPPPKPPRIPAGVAQQLAAEADRVATLTPGTCEARDAAATFRAHVIGSIGRIPPHYQEPLMSAANSLVDRLAACAEPRPVEPEHDNGHGKKHGKKKHDDEGNEGHG
Ga0373948_0013553_818_1195	3300034817	Rhizosphere Soil	MRWRSGLLTASSAALLAGCGGNGHQAQPPPKPPRIPAGVATRLAAEADRVAGMTPGTCAARDAANRFRSDVIASVGRLPARYQEPLTSAANDLAGRLAACTPPQPKQPEHGHHGHGHGKKKGEGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073211

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences