Metagenome Family F073203

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073203
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	102 residues
Representative Sequence	GPSRTFVFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS
Number of Associated Samples	100
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.60 %
% of genes near scaffold ends (potentially truncated)	61.67 %
% of genes from short scaffolds (< 2000 bps)	79.17 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (27.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.20% β-sheet: 48.06% Coil/Unstructured: 45.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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SCOP family	SCOP domain	Representative PDB	TM-score
b.60.1.1: Retinol binding protein-like	d1x8pa_	1x8p	0.70975
b.61.7.1: Extracellular hemoglobin linker subunit, receptor domain	d2gtlo1	2gtl	0.69563
b.61.4.1: Quinohemoprotein amine dehydrogenase A chain, domain 3	d1pbya5	1pby	0.68721
b.61.4.1: Quinohemoprotein amine dehydrogenase A chain, domain 3	d1jmxa5	1jmx	0.6692
b.61.7.1: Extracellular hemoglobin linker subunit, receptor domain	d2gtln1	2gtl	0.66906

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13474	SnoaL_3	7.50
PF04389	Peptidase_M28	5.00
PF02239	Cytochrom_D1	1.67
PF02563	Poly_export	1.67
PF00069	Pkinase	1.67
PF13431	TPR_17	0.83
PF01810	LysE	0.83
PF04140	ICMT	0.83
PF00158	Sigma54_activat	0.83
PF01171	ATP_bind_3	0.83
PF01965	DJ-1_PfpI	0.83
PF13450	NAD_binding_8	0.83
PF13649	Methyltransf_25	0.83
PF01268	FTHFS	0.83
PF12850	Metallophos_2	0.83
PF00977	His_biosynth	0.83
PF13590	DUF4136	0.83
PF14579	HHH_6	0.83
PF10531	SLBB	0.83
PF04191	PEMT	0.83
PF02371	Transposase_20	0.83
PF08818	DUF1801	0.83
PF00486	Trans_reg_C	0.83
PF01546	Peptidase_M20	0.83
PF01042	Ribonuc_L-PSP	0.83
PF12680	SnoaL_2	0.83
PF03551	PadR	0.83
PF06325	PrmA	0.83
PF01541	GIY-YIG	0.83
PF00756	Esterase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.67
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	1.67
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.83
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.83
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.83
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.83
COG2759	Formyltetrahydrofolate synthetase	Nucleotide transport and metabolism [F]	0.83
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.83
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.83
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.83
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.83
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.83
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.83
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.83
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.83
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.83
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.83 %
Unclassified	root	N/A	9.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.00 %
Unclassified	root	N/A	9.17 %
Viruses	superkingdom	All Organisms → Viruses	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.00 %
Unclassified	root	N/A	9.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.50 %
Unclassified	root	N/A	9.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	65.83 %
Unclassified	root	N/A	9.17 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.33 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.00 %
Unclassified	root	N/A	9.17 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.33 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.00 %
Unclassified	root	N/A	9.17 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.33 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.00 %
Unclassified	root	N/A	9.17 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.33 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.00 %
Unclassified	root	N/A	9.17 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.33 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_9387386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1370	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104529044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300000559\|F14TC_103462285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300000559\|F14TC_106856361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300000787\|JGI11643J11755_10855915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300003319\|soilL2_10193855	All Organisms → Viruses → Predicted Viral	1285	Open in IMG/M
3300004114\|Ga0062593_100263285	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300004156\|Ga0062589_101418527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300004157\|Ga0062590_101890101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300004480\|Ga0062592_101450358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300005288\|Ga0065714_10141420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300005295\|Ga0065707_10002164	All Organisms → cellular organisms → Bacteria	4926	Open in IMG/M
3300005338\|Ga0068868_101542321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	623	Open in IMG/M
3300005353\|Ga0070669_100554326	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300005440\|Ga0070705_101553012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005444\|Ga0070694_100108649	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300005471\|Ga0070698_100779401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300005564\|Ga0070664_100898157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300005617\|Ga0068859_100557817	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005618\|Ga0068864_101581218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300005719\|Ga0068861_101388319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300005843\|Ga0068860_100574522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300005844\|Ga0068862_100937941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300006049\|Ga0075417_10735994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300006846\|Ga0075430_101653262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300006852\|Ga0075433_10356567	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300006854\|Ga0075425_102802603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300006880\|Ga0075429_100505293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300006918\|Ga0079216_10506232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300007004\|Ga0079218_11089487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300009094\|Ga0111539_10004139	All Organisms → cellular organisms → Bacteria	19023	Open in IMG/M
3300009094\|Ga0111539_10063002	All Organisms → cellular organisms → Bacteria	4388	Open in IMG/M
3300009094\|Ga0111539_10868103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300009094\|Ga0111539_13068595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300009098\|Ga0105245_11981982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	636	Open in IMG/M
3300009100\|Ga0075418_10076529	All Organisms → cellular organisms → Bacteria → Acidobacteria	3562	Open in IMG/M
3300009101\|Ga0105247_10078432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2077	Open in IMG/M
3300009147\|Ga0114129_10223478	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300009147\|Ga0114129_10754919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1245	Open in IMG/M
3300009147\|Ga0114129_11584457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300009156\|Ga0111538_12169784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300009162\|Ga0075423_10001967	All Organisms → cellular organisms → Bacteria	18469	Open in IMG/M
3300009162\|Ga0075423_11368364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300009162\|Ga0075423_11574346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300009177\|Ga0105248_10001685	All Organisms → cellular organisms → Bacteria → Acidobacteria	24592	Open in IMG/M
3300009553\|Ga0105249_10385337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300009609\|Ga0105347_1312763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300010036\|Ga0126305_10143327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300010037\|Ga0126304_10000222	All Organisms → cellular organisms → Bacteria	20375	Open in IMG/M
3300010040\|Ga0126308_10081198	All Organisms → cellular organisms → Bacteria → Acidobacteria	1952	Open in IMG/M
3300010043\|Ga0126380_11834493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010362\|Ga0126377_11925745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300010362\|Ga0126377_11963215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300010398\|Ga0126383_13115395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300010399\|Ga0134127_10034811	All Organisms → cellular organisms → Bacteria → Proteobacteria	4057	Open in IMG/M
3300010399\|Ga0134127_10830812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300010399\|Ga0134127_13709500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010400\|Ga0134122_10371877	Not Available	1252	Open in IMG/M
3300010403\|Ga0134123_11742142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300010403\|Ga0134123_13546070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300011271\|Ga0137393_10790468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300012355\|Ga0137369_10286786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300012360\|Ga0137375_10607704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300012527\|Ga0136633_1140753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300012680\|Ga0136612_10036268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2480	Open in IMG/M
3300012684\|Ga0136614_10345250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	1097	Open in IMG/M
3300012897\|Ga0157285_10072826	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300012912\|Ga0157306_10296593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300012930\|Ga0137407_12347113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012948\|Ga0126375_10953061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300012957\|Ga0164303_11054291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300013308\|Ga0157375_12216410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300014745\|Ga0157377_10068807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2041	Open in IMG/M
3300015077\|Ga0173483_10036127	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300015371\|Ga0132258_13238478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300015372\|Ga0132256_100443369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1405	Open in IMG/M
3300015373\|Ga0132257_101228643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300018432\|Ga0190275_10048350	All Organisms → cellular organisms → Bacteria	3539	Open in IMG/M
3300018432\|Ga0190275_13088089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300018465\|Ga0190269_10448235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300018468\|Ga0066662_12971305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300018469\|Ga0190270_10228811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1598	Open in IMG/M
3300018469\|Ga0190270_12070020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300018469\|Ga0190270_12435118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300018481\|Ga0190271_10043236	All Organisms → cellular organisms → Bacteria	3768	Open in IMG/M
3300018481\|Ga0190271_10108239	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300019377\|Ga0190264_11265030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300019877\|Ga0193722_1136101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300025315\|Ga0207697_10449227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300025925\|Ga0207650_11785445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300025927\|Ga0207687_10999033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300025930\|Ga0207701_10864973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	759	Open in IMG/M
3300025936\|Ga0207670_10621562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300025936\|Ga0207670_11555230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300025960\|Ga0207651_11874660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300025972\|Ga0207668_10801802	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300026095\|Ga0207676_10201868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1757	Open in IMG/M
3300026121\|Ga0207683_11528572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300027617\|Ga0210002_1031497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	882	Open in IMG/M
3300027873\|Ga0209814_10551144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300027907\|Ga0207428_10304118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300031538\|Ga0310888_10068337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1721	Open in IMG/M
3300031847\|Ga0310907_10057489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1536	Open in IMG/M
3300031908\|Ga0310900_11563591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031912\|Ga0306921_11588198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300032003\|Ga0310897_10055925	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300032013\|Ga0310906_10019526	All Organisms → cellular organisms → Bacteria → Proteobacteria	2860	Open in IMG/M
3300032075\|Ga0310890_10476135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300032261\|Ga0306920_103980032	Not Available	537	Open in IMG/M
3300034115\|Ga0364945_0081165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300034150\|Ga0364933_080905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.17%
Host-Associated	Host-Associated	40.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.83%
Plants	Host-Associated → Plants	40.83%
Aquatic	Environmental → Aquatic	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.33%
Freshwater	Environmental → Aquatic → Freshwater	2.50%
Floodplain	Environmental → Terrestrial → Floodplain	1.67%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.17%
Ice	Environmental → Aquatic → Freshwater → Ice	2.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.33%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.50%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0351.00002910	2162886011	Miscanthus Rhizosphere	VFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS
INPhiseqgaiiFebDRAFT_1045290442	3300000364	Soil	LSGLSRTFTFDHELTYHLSDYTKQSRFVLYDNGAFALQYVALGAEYRGGYTEANGVITFEWEGWSIAGPWGATGTXKDGSLTXQYNLIMQLSDFEDGVYRLTP*
INPhiseqgaiiFebDRAFT_1046997721	3300000364	Soil	PVSNYTKTSKFVLYDNSAFVLQYPGLXPAGSYRGAYTESNGVLTFQWEGWSIAGPWGATGTLKGNSLTVQYNEIMELTDFENAVYVRVP*
F14TC_1034622852	3300000559	Soil	PVPRPIGPPTRTFPPLSGPSRTFAFDREVSYRVSDYTRKSIFVLYDNGAFVLRFSGPGEYRGGYTVANGVITFEWEGWNVAGPWGATGTIRGDSLTVEYNLIMQWTDFEDAVYALMPPT*
F14TC_1068563612	3300000559	Soil	PPLSGPSRTFNFDRSASHAVSAYTRSSRFILYDNGAFALEYPSLGGSYRGGYTEANGVLSFDWEGWSSAGPWGATGTIKGDALTVEYNLIMELTDFXXXXNALSR*
JGI11643J11755_108559151	3300000787	Soil	SRTFTFDRELTYQLRDYTKQSRFVLYDNGAFALQYLSLGGEYRGAYTESNGIIAFQFEGWSIAGAWGATGMLKDGSLTVQYNLIMRLSDFEDAVYGLKH*
soilL2_101938552	3300003319	Sugarcane Root And Bulk Soil	VFDHQLTYPVQDYTKRSRFILYDNGAFVLRYEGLGEYRGGFTESNGVITFDWEGWSAAGPWGAGATLEHTSLIVRFNLIMQMTDFEDAVYVEDGPSAR*
Ga0062593_1002632854	3300004114	Soil	RTFPPLSGPSRTFVFDRELKYRVSDYTRKSSFMLYDNGAFVLRYGGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSIRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0062589_1014185272	3300004156	Soil	VFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFE
Ga0062590_1018901012	3300004157	Soil	PPAPPPTNFPALSGLSRTFTFDHELTYHLSDYTKQSRFVLYDNGAFALQYVALGAEYRGGYTESNGVITFQWEGWSSAGPWGATGTLKDGSLTVQYNLIMQMTDFEDAVYGLKQ*
Ga0062595_1004627851	3300004479	Soil	MDYTKQSRFVLYDNGAFVLQYVSLGVEYRGGYTESNGVITFQWEGWSTAGAWGATGTLKDGSLTVRYNVVMQLSDFEDAVYGATIP*
Ga0062592_1014503581	3300004480	Soil	SGPARTFVFERELSFHVAAYTKASRFVLYDNGAFVLQYEVGDYRGRYTESNGEIAFDWEGSSAAGPWGATGTLKQDSLTVQYNVIMQLTDFEDAVYVLVKN*
Ga0065714_101414201	3300005288	Miscanthus Rhizosphere	VFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0065707_100021641	3300005295	Switchgrass Rhizosphere	VPPVPTGFPPLSGPARTFVFERELSFHVAAYTKASRFVLYDNGAFVLQYEVGDYRGRYTESNGEIAFDWEGSSAAGPWGATGTLKQDSLTVQYNVIMQLTDFEDAVYVLVKN*
Ga0068868_1015423212	3300005338	Miscanthus Rhizosphere	AHELRYAVQDYTRKSTFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSVRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0070669_1005543261	3300005353	Switchgrass Rhizosphere	PSRTFVFAHELRYAVQDYTRKSTFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSVRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0070705_1015530122	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VFDHELTYPVRDYTKRSRIVLYDNGAFVLRYDGLGDYRGGYMESNGVVSFDWEGWSAAGPWGASGTLEKTSLTIQFNFIMQLTDFEDAVYVLTPS*
Ga0070694_1001086493	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VFDHELTYLVRDYTKRSRIVLYDNGAFVLRYDGLGDYRGGYMESNGVVSFDWEGWSAAGPWGASGTLEKTSLTIQFNFIMQLTDFEDAVYVLTPS*
Ga0070707_1009858782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GPARTFVFDHEVSYHVSEYTKDSRFILYDTHEFVLRFDGLSLDYRGTYSESNGVIVFDWEGWSSAGPWGATGTLKGDTLTVNYNIIMSLTDFEDAAYVLQR*
Ga0070698_1007794011	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	APGQPPPRSFPPLTGPSRTFAFDRELTYAVSAYTKGSRFVLYNTGGFVLQYPSISGEYRGGYTEADGVITFEWEGWNIQGPWGATGTINDGTLTVRYNDIMIWTDFEDAVYRLTP*
Ga0070664_1008981572	3300005564	Corn Rhizosphere	LTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0068859_1005578173	3300005617	Switchgrass Rhizosphere	LSGPSRTFVFAHELRYAVQDYTRKSTFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSVRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0068864_1015812182	3300005618	Switchgrass Rhizosphere	PNFLALSGPSRIFTFDHALTYGVGDYTKNSRFVFYDNGAFVLQFAICKCGGEYRGRYTEANGLITFEWEGWSVAGPWGATGTVQGDTLTVQYNPIMELSDFENAVYLRTQ*
Ga0068861_1013883192	3300005719	Switchgrass Rhizosphere	PVAAPTAPPTRTFPPLSGPSRTFVFAHELRYAVQDYTRKSTFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSVRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0068863_1011852811	3300005841	Switchgrass Rhizosphere	LYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWKGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0068860_1005745221	3300005843	Switchgrass Rhizosphere	PAPSPGNFPPLAGQSRTFAFSHELTYRLMDYTKQSRFVLYDNGAFVLQYVSLGVEYRGGYTESNGVITFQWEGWSTAGAWGATGTLKDGSLTVRYNVVMQLSDFEDAVYGAAVP*
Ga0068862_1009379412	3300005844	Switchgrass Rhizosphere	LSGPSRTFVFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0075417_107359941	3300006049	Populus Rhizosphere	HELTDPVRDYTKRSRFILYDNGAFVLRYEGIGDDRGGFTESNGVITLDWEGWSAAGPWGASATLERTSLIVRFNFIMQLTDFEDAVYVLTPST*
Ga0075430_1016532621	3300006846	Populus Rhizosphere	PPTRTFPPLSGPSRTFAFDRELSYRVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVANGVITFEWEGWSAAGPWGATGTIRGDSLTVEYNFIMQLTDFEDAVYALVPAT*
Ga0075433_103565673	3300006852	Populus Rhizosphere	GPSRTFVFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0075425_1028026031	3300006854	Populus Rhizosphere	VFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAV
Ga0075429_1005052931	3300006880	Populus Rhizosphere	SPPRTFPPLSGPSRTFVFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0079216_105062321	3300006918	Agricultural Soil	GPGRTFVFGRELLYPVSSYTSTSRFVLYDNGAFVLQYPTLGEPGYRGEYQQVNGIITFEWEGWNITGPWGATGTLSGDSLAVRYNQVMQWTDFEDAVYVLMR*
Ga0079218_110894872	3300007004	Agricultural Soil	GAIQPPAALPSAAAAPVSVFPSLSGPSRTFAFEREVSYPVSDYTKGSRLVLYDNGAFVLQYPTLSSGGYRGRYTEVNGVITFEWEGWSAAGPWGAIGTLQGDSLRVQYNFIMQMTDFEDAVYALAR*
Ga0111539_1000413924	3300009094	Populus Rhizosphere	VSYRVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVTDGVITFEWEGWNVAGPWGATGTIRGDSLTVEYNLIMQWTDFEDAVYALVPST*
Ga0111539_100630029	3300009094	Populus Rhizosphere	SGPSRTFVFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0111539_103361442	3300009094	Populus Rhizosphere	LYPVGDYTRNSRFVLYDNGAFVLQYPSLSEGGYRGGYQDANGVIMFEWEGWNVAGPWGATGTLKRDSLTIQYNEIMQLADFEDASYVLMP*
Ga0111539_108681032	3300009094	Populus Rhizosphere	VFDHELTDPVRDYTKRSRFILYDNGAFVLRYEGIGDDRGGFTESNGVITLDWEGWSAAGPWGASATLERTSLIVRFNFIMQLTDFEDAVYVLTPST*
Ga0111539_130685951	3300009094	Populus Rhizosphere	ARTFVFERELSFHVAAYTKASRFVLYDNGAFVLQYEVGDYRGRYTESNGEIAFDWEGSSAAGPWGATGTLKQDSLTVQYNVIMQLTDFEDAVYVLVKN*
Ga0105245_119819821	3300009098	Miscanthus Rhizosphere	QDYTRKSTFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSVRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0075418_100765294	3300009100	Populus Rhizosphere	VSFRVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVTDGVITFEWEGWNVAGPWGATGTIRGDSLTVEYNLIMQWTDFEDAVYALVPST*
Ga0105247_100784323	3300009101	Switchgrass Rhizosphere	LAGQSRTFAFSHELTYRLMDYTKQSRFVLYDNGAFVLQYVSLGVEYRGGYTESNGVITFQWEGWSTAGAWGATGTLKDGSLTVRYNVVMQLSDFEDAVYGATIP*
Ga0114129_102234782	3300009147	Populus Rhizosphere	LSGPSRTFTFDKALAYGVRDYTKQSRFVLYDTGGFALQYASLGGEYRGGYTEANGVITFAWEGWSTAGPWLATGTLKGGSLTVQYNFIMMMSDFEDAVYRLTE*
Ga0114129_107549194	3300009147	Populus Rhizosphere	LSGPSRTFFFDREESYPVSDYTKKSRFVLYDNGAFVLQYLSLGEGGYRGGYKDANGVITFEWEGSNTAGPWGATGTLQGDSLRVQYNLIMLYSDFEDAVYALMR*
Ga0114129_115844571	3300009147	Populus Rhizosphere	VFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYVLTPS*
Ga0111538_121697841	3300009156	Populus Rhizosphere	VFDHELTYPVRDYTKRSRIVLYDNGAFVLRYDGLGDYRGGYTESNGVIRFDWEGWSAAGAWGASGTLEKTSLTIQFNFIMQLTDFEDAFYVLTPS*
Ga0075423_100019673	3300009162	Populus Rhizosphere	LTYAVRAYTKGSRFVLYNTGGFVLQYPSINGEYRGGYTEADGVITFEWEGWNIQGPWGATGTVKDGTLTIRYNEIMLWSDFEDAVYRLTP*
Ga0075423_113683641	3300009162	Populus Rhizosphere	VPPVPTGFPPLSGAARTFVFDRELSFHVAAYTKTSRFVLYDNRAFALLYDVGEYRGRYTESNGEIVFDWEGSSAAGPWGASGTLKQDSLTVQYNVIMQLTDFEDAVYVLVKN*
Ga0075423_115743462	3300009162	Populus Rhizosphere	RAFPPLSGPSRTFVFDHELTDPVRDYTKRSRFILYDNGAFVLRYEGIGDDRGGFTESNGVITLDWEGWSAAGPWGASATLERTSLIVRFNFIMQLTDFEDAVYVLTPST*
Ga0105248_1000168520	3300009177	Switchgrass Rhizosphere	LAGQSRTFAFSHELTYRLMDYTKQSRFVLYDNGAFVLQYVSLGVEYRGGYTESSGVITFQWEGWSTAGAWGATGTLKDGSLTVRYNVVMQLSDFEDAVYGATIP*
Ga0105249_103853373	3300009553	Switchgrass Rhizosphere	VFDHELTYPVRDYTKRSRFILYDNGAFVLRYEGIGDYRGGFTESNGVITLDWEGWSAAGPWGASATLERTSLIVRFNFIMQLTDFEDAVYVLTPS*
Ga0105347_13127632	3300009609	Soil	SGPSRTFAFDREVSFRVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFEWEGWNVAGPWGATGTIRGDSLTVEYNEIMQWTDFEDAVYALVPST*
Ga0126305_101433271	3300010036	Serpentine Soil	VFDRELSSPVQDYTRKSRLVLYDTGAFVLRYDDIGDYRGGYTESNGVITFDWEGWSVAGPWGASATLERTSLTIRFNFIMQMTDFEDAVY
Ga0126304_1000022222	3300010037	Serpentine Soil	VFDRELSSPVQDYTRKSRLVLYDTGAFVLRYDDIGDYRGGYTESNGVITFDWEGWSVAGPWGASATLERTSLTIRFNFIMQMTDFEDAVYVLMPPQQPW*
Ga0126308_100811982	3300010040	Serpentine Soil	VFDRELSYPVQDYTRKSRLVLYDTGAFVLRYDDIGDYRGGYTESNGVITFDWEGWSVAGPWGASATLERTSLTIRFNFIMQMTDFEDAVYVLMPPQQPW*
Ga0126380_118344931	3300010043	Tropical Forest Soil	PPVFPPPSGASRTFTFERELTYHVHDYTKQSRFVLYDNGAFVLQYIGLSGEYRGGYTSANGVIDFKWEGSGAAAPWSATGTLTADSLTIRYNLNMELSDFDNAVYTLRP*
Ga0126377_119257451	3300010362	Tropical Forest Soil	VSEYTKNSRFVLYENGAFVLQYVSLGGQYRGKYTEANGVLDFQWEGWSAAGPWGATGTVKGDLLTVQYNLIMQLTDFEDAVYGLAP*
Ga0126377_119632151	3300010362	Tropical Forest Soil	FPTLTGPSRTFAFDHALSDHVQDYTKHSRFILYDTGGFVLQYTSLTGDGYRGGYTQADGTITFDWEGWSVAGPWAATGTVKDGTLTVRYNDIMQWTDFEDAVYRLTP*
Ga0126383_131153951	3300010398	Tropical Forest Soil	LTGASRSFTFERELSYHVRDYTKQSRFVLYDDGAFVLQYVGLSIEYRGGYTSANGVIDFKWEGTSTAGPWSATGTLAGDSLTVQYNEIMQLSDFENAVYAASKPTAP*
Ga0134127_100348113	3300010399	Terrestrial Soil	VFDHEVAYAVRDYTKRSRIVLYDNGAFVLRYEGIGDYRGGYTVANGVITFEWEGWSAAGPWGATGTIRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0134127_108308121	3300010399	Terrestrial Soil	LSGLSRTFAFDHQFTYPLTDYTRQSRFVLYDNGAFALQYVSLGIDYRGGYTESNGVITFQWEGWSVAGPWGATGTLKDGSLTVQYNLIMQMTDFEDAVYALK*
Ga0134127_137095001	3300010399	Terrestrial Soil	PSTFPAPTVPPTRTFPPLSGPSRTFAFDREVSYRVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVANDVITFEWEGWNVAGPWGATGTIRGDSLTVEYNLIMQWTDFEDAVYALVPST*
Ga0134122_103718772	3300010400	Terrestrial Soil	GPSRTFSFDHELSYQVREFTKTSRFVLYDNGAFVLEYTGVGAFGYRGGYTEMNGIISFDWEGSSTGGPWGATGTLKGDLLTVQYNELMQHSDFEDAVYALVASSSG*
Ga0134123_117421422	3300010403	Terrestrial Soil	PPLSGPSRTFVFDHELTYPVRDYTKRSRIVLYDNGAFVLRYDGLGDYRGGYMESNGVVSFDWEGWSAAGPWGASGTLEKTSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0134123_135460702	3300010403	Terrestrial Soil	VPSPRAPVPSIFPPLSGPSRTFTFDRELTYHVSGYTKQSRFVLYENGAFTLQYVSLGIEYRGGYTESNGVITFQWEGWSVAGPWGATGTLKDGSLTVQYNLIMQMTDFEDAVYALK*
Ga0137393_107904682	3300011271	Vadose Zone Soil	VSYPVSWYTRDSRFVLYENGAFALRYQGLGLEYRGGYTESNGVIVFDWEGWSGAGPWGATGTLKADTLTVRYNFIMASTDFEDASYVLGH*
Ga0150985_1116211182	3300012212	Avena Fatua Rhizosphere	VADYTKTSRFVLYDNGAFVLEYPSISLDKGYRGGYKDANGVMTFEWEGWNIQGPWGATGTVSGGSLTVRYNTIMQLSDFDDAVYRLNP*
Ga0137369_102867862	3300012355	Vadose Zone Soil	LTGPSRTFIFVRELSYPVSNYTSQSRFVLYDNGAFVLQYVGLGADYGGGYTETNGVIAFEWEGWSVAGPWGATGTIRGETLTVQYNLIMQLTDFEDAVYTRMP*
Ga0137375_106077041	3300012360	Vadose Zone Soil	LTGPSRTFIFVRELSYPVSNYTSQSRFVLYDNGAFVLQYVGLGADYGGGYTETNGVIAFEWEGWSVAGPWGATGTIRGETLTVQYNLIMQLTDFEDA
Ga0136633_11407532	3300012527	Polar Desert Sand	LSGPSRTFVFDRELSRRVSRYTKESRFVLYDSGAFVLQYPPPPEGGLAGGYKDADGVITFEWEGWSILGPWGAVGTLRGDSLTINYNEVMELNDFEDAVYVLIR
Ga0136612_100362681	3300012680	Polar Desert Sand	LSGPSRTFVFDRELSYRVSDYTKKSRFVLYDNGAFVLQYPSLGERGYRGGYEDANGVIAFQWEGWSIAGPWGATGTLKNDSLTVHYNQIMQLTDFEDAVYVRTP*
Ga0136614_103452501	3300012684	Polar Desert Sand	LSGPSRTFVFDRELSCRVSDYTTKSRFVLYDNGAFVLQYPSLGERGYRGGYEDANGGIAFQWEGWSIAGPWGATGTLKNDSLTVHYNQIMQLTDFEDAVYVRTP*
Ga0157285_100728261	3300012897	Soil	TFPPLSGPSRTFVFDRELKYRVSDYTRKSSFMLYDNGAFVLRFSGPGEYRGGYTVADGGVTFEWEGWSAAGPWGATGSIRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0157306_102965931	3300012912	Soil	VAAPTALPPRTFPPLSGPSRTFVFDRELKYRVSDYTRKSSFMLYDNGAFVLRYGGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSIRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0137407_123471131	3300012930	Vadose Zone Soil	MSGPFRTFTFDHQLTPSVAYYTMESRFVLYDDGAFVLGYPSAIGEYRGGYTESNGVITFEWEGWSAAGPWGATGTIKDGLLTVQYNLIMGLTD
Ga0126375_109530611	3300012948	Tropical Forest Soil	LTGASRTFTFERELSYHVRDYTKQSRFVLYDDGAFVLQYVGLSIEYRGGYTSTNGVIDFKWEGSSSAGSWSATGTLAGDSLTVQYNQIMELTDFENAVYTLSTPTAP*
Ga0164303_110542911	3300012957	Soil	GLSRTFTFDHELTYALRDYTKQSRFVLYDDGAFALQYVSLGIEYHGGYTESNGVITFQWESWSSAGPWGATGTLKDGSLTVQYNLIMQMTDFEDAVYGLKQ*
Ga0157375_122164102	3300013308	Miscanthus Rhizosphere	RDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYVLTPS*
Ga0157377_100688071	3300014745	Miscanthus Rhizosphere	LSGSSRTFIFDRGLSYPVSDYTKASRFVLYDNGAFVLQYVGLGEYRGGYTEANGVMNFQWEGWSTAGPWGATGIVNGNSLTVQYNAVMEWSDFEDAVYALMH*
Ga0173483_100361274	3300015077	Soil	PVAAPTAPPTRTFPPLSGPSRTFVFDRELKSRVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFEWEGWSAAGPWGATGSIRGDSLTVEYNLIMQLTDFEDAVYALVPST*
Ga0132258_132384781	3300015371	Arabidopsis Rhizosphere	LAGPSRTFTFDHALSSRVSGYTAQSRVVLYDNGAFVLQYDSLSAGYRGGYDETNGVIVFHWEGWSSAGPWGATGTLRGDLLTVQYNLIMQLTDFEDAVYALKP*
Ga0132256_1004433693	3300015372	Arabidopsis Rhizosphere	PPLSGPSRTFVFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS*
Ga0132257_1012286431	3300015373	Arabidopsis Rhizosphere	TFAPPSGPARVFTFDHELSYSVRDYTKNSRFVLYDSGAFDLDYPGGGYGGSWTDANGVITFEWKGWSAAGPWGATATLQGDTLTVRYNIVMQLTDFEDAAYRRTQ*
Ga0190275_100483506	3300018432	Soil	MDASMSPPTPSSVAAFPPLSGPSRTFIFERELLYPVTDSTMKSRLVLYDNGAFVLQYPSTGEGGYRGGYSEANGALTFAWEGWSAAGPWGAAGILTGDSLTLKFNPIMQLTDFEDAVYVLMR
Ga0190275_130880892	3300018432	Soil	ERELLYPVTDSTMKSRLVLYDNGAFVLQYLSLGDGGYRGGYKDANGVIMFEWKGWSVAGPWGATGTLEGNSLTIQYNEIMQHTDFEDALYVLPIRAS
Ga0190269_104482351	3300018465	Soil	KTSRFLLYDNGAFVLEYPGYPFGYRGVYSESNGQITFEWEGWSVAGPWGAIGALDGDSLTVRFNSIMQLTDFDDAVYTLVR
Ga0066662_129713051	3300018468	Grasslands Soil	TFDHEVTYQVTDYTKQSRFVLYDDGAFVLQYVSLRGEYRGSYTESNGVITFEWEGWSSAGPWGATGALKDGSLAVHYNVIMQLTDFEDAVYRLTP
Ga0190270_102288111	3300018469	Soil	SPAPPAAPTFPPLSGPSRTFVFDRELSYRVSDYTKKSRFVLYDNGAFVLQYPSLGEGGYRGGYEDANDVVAFEWEGWNVTGPWGATGTVEGDSLTVRYNQIMQWTDFEDAVYVRIP
Ga0190270_120700201	3300018469	Soil	APPAAPTFPPLSGPSRTFVFDRELSYRVSDYTKNSRFVLYDNGAFVLQYPSLGEGGYRGGYEDANGVITFDWEGWSVVGPWGATAALKGDSLAVQYNQIMQWTDFEDAVYVRMP
Ga0190270_124351181	3300018469	Soil	ATIFPPLSGPSRIFIFDCEVSYPVTGYTRNSRFVLYDNGAFVLQYPSLGERGYRGGYRDANGVIKFEWEGWSVAGPWGATGTLKGDTLTVQYNEIMHYTDFEDALYVLPGSKS
Ga0190271_100432362	3300018481	Soil	LSGPSRSFAFDRELSYRVSDYTKMSRFVLYDNGASVLQFPSLGEGGYRGGYTDANGVITFEWEGRNVAGSWGASGTLKGDALTVQYNPMMQLSDFEDAVYVRIP
Ga0190271_101082391	3300018481	Soil	VFQCATRRVIPSLSGPSRTFVFDRELSYRVSDYTKRSRFILYDNGAFVLQYPSLGEGGYRGAYDGANGGLAFEWEGWNVAGPWGATGTLNGDSLTVQYNDIMQWTDFEDAVYVRIP
Ga0190264_112650301	3300019377	Soil	ITAPPLSGPSRTFVFDRELSYRVRDYTKNSRFVLYDNGAFVLRFEGLAGEHRGAYTEADGVISFEWERWNIGGPWGATGALKGDRLTVQYNEIMQWTDFEDAVYALTGDR
Ga0193722_11361011	3300019877	Soil	LSGPSRTFTFDHASTPYLTDYTTQSQFVLYDDGGFALQYVSLGVGYRGGYTESNGVITFQWEGWSIAGAWGATGKVNDGSLTVQYNLIMQLSDFEDAVYGLKQ
Ga0207697_104492271	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	TFVFAHELRYAVQDYTRKSTFVLYDNGAFVLRFSGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSVRGDSLTVEYNLIMQLTDFEDAVYALVPST
Ga0207650_117854452	3300025925	Switchgrass Rhizosphere	FDHELSYRVSDYTRKSSVVLYDNGAFVLRFSGPGEYRGGYTVADGVITFDWEGWSAAGPWGATGSIRGDSLTVEYNLIMQLTDFEDAVYALVPST
Ga0207687_109990331	3300025927	Miscanthus Rhizosphere	PPLSGPSRTFAFDHELTYRVSDYTRQSRFILYDTGGFLLQYTSLTGDGYRGGYTQADGTITFDWEGWSVAGPWAATGVVKDGTLTVRYNDIMQWTDFEDAVYRLTP
Ga0207701_108649731	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DRELKYRVSDYTRKSSFVLYDNGAFVLRYGGPGEYRGGYTVTDGVITFDWEGWSAAGPWGATGTIRGDSLTVEYNLIMQLTDFEDAVYALVPST
Ga0207670_106215622	3300025936	Switchgrass Rhizosphere	VFDHELTYLVRDYTKRSRIVLYDNGAFVLGYDRLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS
Ga0207670_115552302	3300025936	Switchgrass Rhizosphere	TAVSASTSPPQPNFLALSGPSRIFTFDHALTYGVGDYTKNSRFVFYDNGAFVLQFAICKCGGEYRGRYTEANGLITFEWEGWSVAGPWGATGTVQGDTLTVQYNPIMELSDFENAVYLRT
Ga0207651_118746601	3300025960	Switchgrass Rhizosphere	VRDYTKRSRIVLYDNGAFVLRYDGLGDYRGGYMESNGVVSFDWEGWSAAGPWGASGTLEKTSLTIQFNFIMQLTDFEDAVYVLTPS
Ga0207668_108018021	3300025972	Switchgrass Rhizosphere	VAYAVRDYTKRSRIVLYDNGAFVLRYEGIGDYRGGYTVANGVITFEWEGWSAAGPWGATGTIRGDSLTVEYNLIMQWTDFEDAVYALVPST
Ga0207676_102018682	3300026095	Switchgrass Rhizosphere	SAVPSTPAPSPGNFPPLAGQSRTFAFSHELTYRLMDYTKQSRFVLYDNGAFVLQYVSLGVEYRGGYTESSGVITFQWEGWSTAGAWGATGTLKDGSLTVRYNVVMQLSDFEDAVYGATIP
Ga0207683_115285722	3300026121	Miscanthus Rhizosphere	MRSGTKRSRIVLYDNGAFVLRYDGLGDYRGGYMESNGVVSFDWEGWSAAGPWGASGTLEKTSLTIQFNFIMQLTDFEDAVYVLTPS
Ga0210002_10314971	3300027617	Arabidopsis Thaliana Rhizosphere	PPLSGPSRTFAFDHELSYRVSDYTRKSSVVLYDNGAFVLRFSGPGEYRGGYTVANGVITFDWEGWSAAGPWGATGTIRGDSLTVEYNLIMQLTDFEDAVYTLVPST
Ga0209814_105511442	3300027873	Populus Rhizosphere	HELTDPVRDYTKRSRFILYDNGAFVLRYEGIGDDRGGFTESNGVITLDWEGWSAAGPWGASATLERTSLIVRFNFIMQLTDFEDAVYVLTPST
Ga0207428_103041181	3300027907	Populus Rhizosphere	GPVPPVPTGFPPLSGAARTFVFDRELSFHVAAYTKTSRFVLYDNRAFALLYDVGEYRGRYTESNGEIAFDWEGSSAAGPWGATGTLKQDSLTVQYNVIMQLTDFEDAVYVLVKN
Ga0310888_100683374	3300031538	Soil	RDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWKGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYVLTPS
Ga0310907_100574893	3300031847	Soil	SPPRTFPPLSGPSRTFVFDHELTYPVRDYTKRSRIVLYDNGAFVLGYDGLGDYRGGYTESNGLIRFDWEGWSVAGPWGASGTLEKRSLTIQFNFIMQLTDFEDAVYLLAPS
Ga0306925_122625041	3300031890	Soil	ALSYSVSNYTKNSQFVLYDNGGFVLQYVSLGGPGYRGGYTVANGVITLAWEGWSAAGPWGATGTLSGNSLTVRYNDIMQLTDFEDAAYVLAP
Ga0310900_115635911	3300031908	Soil	RTFVFDHELTYPVRDYTKRSRIVLYDNGAFVLRYDGLGDYRGGYMESNGVVSFDWEGWSAAGPWGASGTLEKTSLTIQFNFIMQLTDFEDAVYVLTPS
Ga0306921_115881981	3300031912	Soil	QTPVTPLMPSATPPPTATFPPLSGPSRTFVFDHALSYSVSNYTKNSQFVLYDNGGFVLQYVSLGGPGYRGGYTVANGVITLAWEGWSAAGPWGATGTLSGNSLTVRYNDIMQLTDFEDAAYVLAP
Ga0310903_108571281	3300032000	Soil	YPVRGYTKSSRFVLYDNSAFVLQYPGIGEYRGGYTATDGTITFEWEGWSTAGPWSATGTLTGDLLTVRYNFIMQMTDFEDAVYVLIP
Ga0310897_100559253	3300032003	Soil	SRTFAFDREVSYRVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVTDGVMTFEWEGWSAAGPWGATGAIRGDSLTVEYNLIMQLTDFEDAVYALVP
Ga0310897_101814681	3300032003	Soil	TFNFDHELANPVRGYTKSSRFVLYDNSAFVLQYPGIGEYRGGYTATDGTITFEWEGWSTAGPWSATGTLTGDLLTVRYNFIMQMTDFEDAVYVLIP
Ga0310906_100195266	3300032013	Soil	RVSDYTRKSSFVLYDNGAFVLRFSGPGEYRGGYTVTDGVMTFEWEGWSAAGPWGATGAIRGDSLTVEYNLIMQLTDFEDAVYALVP
Ga0310890_104761352	3300032075	Soil	RTFVFDRELSYRVSDYTKMSRFVLYDNGAFVLQYPSLGQGGYRGGYKDANGVTTFEWEGWSVAGPWGASGTLEGDALTVQYNQIMLLTDFEDAVYVRIP
Ga0306920_1039800321	3300032261	Soil	PLTGPSRTFTFDRELSYHVRDYTKQSRFVLYDDGAFVLQYVGLSIEYRGGYTSTNGVIDFKWEGSSTAGSWSATGTLAGDSLTVQYNQLMELSDFENAVYTLSKPTAL
Ga0364945_0081165_181_492	3300034115	Sediment	LAGPSRTFTFDHALSYRVSGYTTQSRVLLYDNGAFVLQYDSLGGGYRGGYDETNGVIVFRWEGWSSAGPWGATGTLTGDLLTVQYNLVMQMSDFEDAVYALKP
Ga0364933_080905_82_393	3300034150	Sediment	LAGPSRTFTFDHALSYRVSGYTTQSRVLLYDNGAFVLLYDSLGGGYRGGYDETNGVIVFRWEGWSSAGPWGATGTLTGDLLTVQYNLVMQMTDFEDAVYALKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073203

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences