Metagenome Family F073122

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073122
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	59 residues
Representative Sequence	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	21.19 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	75.83 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (49.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (39.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 39.08% β-sheet: 0.00% Coil/Unstructured: 60.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF12836	HHH_3	65.00
PF08264	Anticodon_1	15.00
PF03772	Competence	11.67
PF13603	tRNA-synt_1_2	2.50
PF00829	Ribosomal_L21p	1.67
PF00300	His_Phos_1	0.83
PF06144	DNA_pol3_delta	0.83
PF01467	CTP_transf_like	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	11.67
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	1.67
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	0.83
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.33 %
Candidatus Nanopelagicales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	3.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.83 %
Candidatus Nanopelagicales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	3.33 %
actinobacterium acIB-AMD-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-6	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573028\|GS313G0146KB_1112076088210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300000928\|OpTDRAFT_10003678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4096	Open in IMG/M
3300000929\|NpDRAFT_10110962	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300001259\|B570J13892_102377	Not Available	1147	Open in IMG/M
3300001274\|B570J13895_1024887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300001282\|B570J14230_10008987	All Organisms → cellular organisms → Bacteria	3873	Open in IMG/M
3300002161\|JGI24766J26685_10014466	Not Available	2063	Open in IMG/M
3300002305\|B570J29619_1016980	Not Available	558	Open in IMG/M
3300002399\|B570J29610_1007045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300002408\|B570J29032_109146251	Not Available	611	Open in IMG/M
3300002835\|B570J40625_100284445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1691	Open in IMG/M
3300003393\|JGI25909J50240_1062815	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005662\|Ga0078894_10428434	Not Available	1193	Open in IMG/M
3300005662\|Ga0078894_10627004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	955	Open in IMG/M
3300007363\|Ga0075458_10008172	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300007544\|Ga0102861_1036244	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300007545\|Ga0102873_1026713	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300007545\|Ga0102873_1085199	Not Available	959	Open in IMG/M
3300007546\|Ga0102874_1095029	Not Available	943	Open in IMG/M
3300007547\|Ga0102875_1117718	Not Available	843	Open in IMG/M
3300007547\|Ga0102875_1151594	Not Available	728	Open in IMG/M
3300007560\|Ga0102913_1032714	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300007562\|Ga0102915_1272906	Not Available	546	Open in IMG/M
3300007585\|Ga0102916_1087604	Not Available	830	Open in IMG/M
3300007590\|Ga0102917_1210631	Not Available	678	Open in IMG/M
3300007593\|Ga0102918_1059054	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300007593\|Ga0102918_1073618	Not Available	1000	Open in IMG/M
3300007600\|Ga0102920_1037211	Not Available	1502	Open in IMG/M
3300007603\|Ga0102921_1099202	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300007603\|Ga0102921_1287864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300007603\|Ga0102921_1316377	Not Available	556	Open in IMG/M
3300007634\|Ga0102901_1161513	Not Available	635	Open in IMG/M
3300007639\|Ga0102865_1039291	Not Available	1393	Open in IMG/M
3300007644\|Ga0102902_1019569	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300007649\|Ga0102912_1101663	Not Available	828	Open in IMG/M
3300007667\|Ga0102910_1024995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1348	Open in IMG/M
3300007670\|Ga0102862_1057886	Not Available	947	Open in IMG/M
3300007706\|Ga0102899_1101329	Not Available	702	Open in IMG/M
3300008021\|Ga0102922_1276792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300008052\|Ga0102893_1051995	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300008055\|Ga0108970_10458640	Not Available	724	Open in IMG/M
3300008108\|Ga0114341_10012151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6521	Open in IMG/M
3300008108\|Ga0114341_10023697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4297	Open in IMG/M
3300008108\|Ga0114341_10111757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3223	Open in IMG/M
3300008111\|Ga0114344_1169762	Not Available	725	Open in IMG/M
3300008113\|Ga0114346_1105345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300008114\|Ga0114347_1046348	Not Available	1876	Open in IMG/M
3300008120\|Ga0114355_1004406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12108	Open in IMG/M
3300008261\|Ga0114336_1213959	Not Available	799	Open in IMG/M
3300008961\|Ga0102887_1074730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1089	Open in IMG/M
3300009052\|Ga0102886_1209957	Not Available	574	Open in IMG/M
3300009059\|Ga0102830_1095035	Not Available	885	Open in IMG/M
3300009059\|Ga0102830_1163033	Not Available	654	Open in IMG/M
3300009080\|Ga0102815_10299103	Not Available	889	Open in IMG/M
3300010309\|Ga0102890_1025799	Not Available	1148	Open in IMG/M
3300010312\|Ga0102883_1231211	Not Available	520	Open in IMG/M
3300010354\|Ga0129333_10281781	Not Available	1491	Open in IMG/M
3300010370\|Ga0129336_10133123	Not Available	1443	Open in IMG/M
3300011268\|Ga0151620_1062496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1210	Open in IMG/M
3300012266\|Ga0136712_1048604	Not Available	502	Open in IMG/M
3300013004\|Ga0164293_10035253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4129	Open in IMG/M
3300013004\|Ga0164293_10035945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4084	Open in IMG/M
3300013004\|Ga0164293_10108568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2118	Open in IMG/M
3300013004\|Ga0164293_10484722	Not Available	819	Open in IMG/M
3300013005\|Ga0164292_10027434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4609	Open in IMG/M
3300013014\|Ga0164295_10011743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-6	6789	Open in IMG/M
3300020151\|Ga0211736_10132705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-6	2081	Open in IMG/M
3300020159\|Ga0211734_10617938	Not Available	567	Open in IMG/M
3300020160\|Ga0211733_10791147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-6	1469	Open in IMG/M
3300020511\|Ga0208593_1024049	Not Available	701	Open in IMG/M
3300020525\|Ga0207938_1010212	Not Available	1728	Open in IMG/M
3300020526\|Ga0208085_1003367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3206	Open in IMG/M
3300020526\|Ga0208085_1049413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300020534\|Ga0208596_1008682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1886	Open in IMG/M
3300020534\|Ga0208596_1014109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1359	Open in IMG/M
3300020546\|Ga0208853_1025162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300020547\|Ga0208361_1013291	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300020556\|Ga0208486_1002445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3253	Open in IMG/M
3300020574\|Ga0208221_1059332	Not Available	702	Open in IMG/M
3300021141\|Ga0214163_1049826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300024346\|Ga0244775_10289511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1359	Open in IMG/M
3300024348\|Ga0244776_10166852	Not Available	1591	Open in IMG/M
3300025091\|Ga0209616_1008462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300027141\|Ga0255076_1010517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1791	Open in IMG/M
3300027145\|Ga0255114_1065963	Not Available	629	Open in IMG/M
3300027278\|Ga0208439_1071276	Not Available	646	Open in IMG/M
3300027285\|Ga0255131_1011071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2067	Open in IMG/M
3300027304\|Ga0208810_1025834	Not Available	1350	Open in IMG/M
3300027804\|Ga0209358_10266272	Not Available	856	Open in IMG/M
3300027805\|Ga0209229_10014117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3399	Open in IMG/M
3300031784\|Ga0315899_10201034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2008	Open in IMG/M
3300032050\|Ga0315906_10401914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300032092\|Ga0315905_10207934	Not Available	1923	Open in IMG/M
3300032092\|Ga0315905_10447368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300032092\|Ga0315905_10798003	Not Available	822	Open in IMG/M
3300033816\|Ga0334980_0017450	Not Available	3090	Open in IMG/M
3300033981\|Ga0334982_0334073	Not Available	704	Open in IMG/M
3300033984\|Ga0334989_0027985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3021	Open in IMG/M
3300033993\|Ga0334994_0046822	Not Available	2719	Open in IMG/M
3300033996\|Ga0334979_0654523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	552	Open in IMG/M
3300034012\|Ga0334986_0322277	Not Available	811	Open in IMG/M
3300034013\|Ga0334991_0127130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	1188	Open in IMG/M
3300034021\|Ga0335004_0112325	Not Available	1807	Open in IMG/M
3300034050\|Ga0335023_0076674	Not Available	1941	Open in IMG/M
3300034060\|Ga0334983_0062121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2430	Open in IMG/M
3300034062\|Ga0334995_0203421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	1374	Open in IMG/M
3300034082\|Ga0335020_0161213	Not Available	1129	Open in IMG/M
3300034095\|Ga0335022_0021395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4247	Open in IMG/M
3300034102\|Ga0335029_0283777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Candidatus Nanopelagicales	1053	Open in IMG/M
3300034105\|Ga0335035_0521003	Not Available	646	Open in IMG/M
3300034105\|Ga0335035_0547482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300034108\|Ga0335050_0013940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5397	Open in IMG/M
3300034110\|Ga0335055_0285253	Not Available	708	Open in IMG/M
3300034119\|Ga0335054_0659422	Not Available	566	Open in IMG/M
3300034121\|Ga0335058_0426440	Not Available	758	Open in IMG/M
3300034167\|Ga0335017_0016472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4219	Open in IMG/M
3300034355\|Ga0335039_0136869	Not Available	1393	Open in IMG/M
3300034356\|Ga0335048_0102713	Not Available	1715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.17%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.33%
Marine	Environmental → Aquatic → Marine	35.83%
Leaf	Host-Associated → Plants → Leaf	0.83%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	33.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	30.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	20.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.83%
River	Environmental → Aquatic → Freshwater → River	2.50%
Coastal	Environmental → Aquatic → Marine → Coastal	2.50%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.67%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	33.33%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	30.83%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.67%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	30.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	24.17%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	11.67%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	4.17%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.17%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.50%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.50%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.67%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.67%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.83%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.83%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.83%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.83%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573028	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, CMGS313-FOS-0p8-ETM-15m	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300001259	Freshwater microbial communities from Lake Mendota, WI - 9JUL2008 deep hole epilimnion	Environmental	Open in IMG/M
3300001274	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002305	Freshwater microbial communities from Lake Mendota, WI - 03OCT2011 deep hole epilimnion	Environmental	Open in IMG/M
3300002364	Freshwater microbial communities from Lake Mendota, WI - 09AUG2011 deep hole epilimnion	Environmental	Open in IMG/M
3300002399	Freshwater microbial communities from Lake Mendota, WI - 07JUL2009 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300008021	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300009052	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300010309	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-3	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012266	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - JTO19cm metaG	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020511	Freshwater microbial communities from Lake Mendota, WI - 15JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020525	Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020526	Freshwater microbial communities from Lake Mendota, WI - 21JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020534	Freshwater microbial communities from Lake Mendota, WI - 12JUL2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020546	Freshwater microbial communities from Lake Mendota, WI - 03OCT2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020547	Freshwater microbial communities from Lake Mendota, WI - 05AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020556	Freshwater microbial communities from Lake Mendota, WI - 03AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300027141	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8h	Environmental	Open in IMG/M
3300027145	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8h	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027285	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8d	Environmental	Open in IMG/M
3300027304	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS313G0146KB_00497050	2189573028	Marine Estuarine	MIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL
OpTDRAFT_100036786	3300000928	Freshwater And Marine	MIVSKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
NpDRAFT_101109623	3300000929	Freshwater And Marine	MDIAAAPTMIVSNRKVNRFLLLTMAIVVKSNAQADIRHGETALCIKAPAQRAPPSARAR*
B570J13892_1023771	3300001259	Freshwater	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL*
B570J13895_10248871	3300001274	Freshwater	AEKTTSCVKYSPIAEFSSDTCRIDIAAAPTIIVSTIRVSLFLLLAIATTARIKAQANIFQGEVALWSNAPAQRAPPKARAR*
B570J14230_100089874	3300001282	Freshwater	VKYSLIAEFSSDACRIDIAAAPTMIVSTIRVNLFFLLAIVTAAITTAQANIRQGETALWSNAPAQRAPPKARAR*
JGI24766J26685_100144662	3300002161	Freshwater And Sediment	MIVSKKRVNLFLLLAIAIAARKNEQANMRQGESALCKSAPAQTAPPKARAL*
B570J29619_10169801	3300002305	Freshwater	AAVPTMIVSNMRVNLFLLLAIATTVKSSAQANIRHGETALCISAPAQRAPPKARAR*
B570J29600_1070862	3300002364	Freshwater	KRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARAL*
B570J29610_10070453	3300002399	Freshwater	KKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL*
B570J29032_1091462512	3300002408	Freshwater	MDIAAAPTMTVSKTRVNRFLLLAIATAAISSAHANIRHGESALCKRAPAQSAPPSARAR*
B570J40625_1002844453	3300002835	Freshwater	APTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
JGI25909J50240_10628152	3300003393	Freshwater Lake	MIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0078894_104284342	3300005662	Freshwater Lake	MIVSKKRVNRFLLLAIAIVARSKAQANMRHGETALCNSAPAQTAPPKARAL*
Ga0078894_106270042	3300005662	Freshwater Lake	MIVSRKIVNLFLLLVIAMAAKSKAQANIRHGETALCKSAPAQTAPPKARAL*
Ga0075458_100081722	3300007363	Aqueous	MDIAAAPTMIVSNRKDNRFLLLAIATVVKSNAQANIRHGETALCISAPAQRAPPKARAR*
Ga0102861_10362443	3300007544	Estuarine	SSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102873_10267132	3300007545	Estuarine	MIVSKKRVNRFLLLAIAIAARNNAQAKMRHGESALCKSAPAQTAPPKARAL*
Ga0102873_10851991	3300007545	Estuarine	FSSEAWRIDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102874_10950292	3300007546	Estuarine	VIAAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102875_11177182	3300007547	Estuarine	MDIAAAPTMIVSKKKVNLFLLLAMAITARSKAPANIRHGETALCNSAPAQTAPPKARAL*
Ga0102875_11515942	3300007547	Estuarine	PTMIVSKRKVNRFLLLAIATVVKSNAQADIRHGETALCIKAPAQRAPPSARAR*
Ga0102913_10327143	3300007560	Estuarine	AAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102915_12729062	3300007562	Estuarine	ACRIDIAAAPTMIVSKKRVNRFLLLAIAIAARNNAQAKMRHGESALCKSAPAQTAPPKARAL*
Ga0102916_10876041	3300007585	Estuarine	KKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102917_12106311	3300007590	Estuarine	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNNAPAQTAPPKARAL*
Ga0102918_10590542	3300007593	Estuarine	MDIAAAPTMIVSNRKDNRFLLLAIATVVKSNAQTNIRHGETALCISAPAQRAPPKARAR*
Ga0102918_10736183	3300007593	Estuarine	KYSVIAAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102920_10372113	3300007600	Estuarine	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102921_10992023	3300007603	Estuarine	IAAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102921_12878642	3300007603	Estuarine	IAAFSSEACRMDIAAAPTMIVSKKKVNLFLLLAIAITARSKAPANIRHGETALCNSAPAQTAPPKARAL*
Ga0102921_13163771	3300007603	Estuarine	MDIAAAPTMIVSKKRVNRFLLLAIAIVARSKAQANMRHGETALCNSAPAQTAPPKARAL*
Ga0102901_11615132	3300007634	Estuarine	MDIAAAPTMIVSKIKVNLFLLLAIAKAAKSNVHRNIRHGETALCISAPAQRAPPKARAR*
Ga0102865_10392912	3300007639	Estuarine	MIVSKKRVNRFLLLAIAIAVKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102902_10195692	3300007644	Estuarine	MIVIKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102912_11016632	3300007649	Estuarine	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102910_10249952	3300007667	Estuarine	MIVSKKRVNRFLLLAIAIAAKSKTHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102862_10578862	3300007670	Estuarine	MIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCKSAPAQTAPPKARAL*
Ga0102823_11628482	3300007692	Estuarine	RFLLLAIAIAAKSKTHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102899_11013292	3300007706	Estuarine	IAAAPTMIVSKRKVNRFLLLAIATVVKSNAQADIRHGETALCSSAPAQRAPPKARAR*
Ga0102922_12767922	3300008021	Estuarine	ACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNSAPAQTAPPKARAL*
Ga0102893_10519953	3300008052	Estuarine	MDIAAAPTMIVSKIKVNIFLLLAIAKAAKSNAQTNIRHGETALCISAPAQRTPPKARAS*
Ga0108970_104586402	3300008055	Estuary	MDIAAAPTMIVSNRKVNRFLLLAIAIVVKSNAQADMRHGETALCIKAPAQRAPPKARAR*
Ga0114341_100121514	3300008108	Freshwater, Plankton	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKNKAQTNIRHGDTALWKSAPAQTAPPRARAL*
Ga0114341_100236973	3300008108	Freshwater, Plankton	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKNKAQPNICHGDTALWKSAPAQTAPPRARAL*
Ga0114341_101117572	3300008108	Freshwater, Plankton	MDIAAAPTMIVSKKKVNLFLLLAIAITARSKAPANIRHGETALCNSAPAQTAPPKARAL*
Ga0114344_11697621	3300008111	Freshwater, Plankton	MDIAAAPTMIVSNRKVNRFLLLAIATVVKSNAQADMRHGETALCISAPA
Ga0114346_11053451	3300008113	Freshwater, Plankton	KKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0114347_10463482	3300008114	Freshwater, Plankton	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKNKAQANIRHGDTALWKSAPAQTAPPRARAL*
Ga0114355_100440615	3300008120	Freshwater, Plankton	AFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0114336_12139592	3300008261	Freshwater, Plankton	MDIAAAPTMIVSKKRVKRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102887_10747302	3300008961	Estuarine	MIVSKKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL*
Ga0102886_12099572	3300009052	Estuarine	AAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102830_10950352	3300009059	Estuarine	MDIAAAPTMIVSNRKVNRFLLLTMAKVVKSNAQADIRHGETALCIKAPAQRAPPSARAR*
Ga0102830_11630332	3300009059	Estuarine	MDIAADPTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNSAPAQTAPPKARAL*
Ga0102815_102991031	3300009080	Estuarine	KRVNRFLLLAIAIAVKSKAHANIRHGETALCNSAPAQTAPPTARAL*
Ga0102890_10257991	3300010309	Estuarine	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRQGETVLCISAPAQRAPPKARAR*
Ga0102883_12312112	3300010312	Estuarine	MDIAAAPTMIVSNMRVNLFLLLAIATTVKSSAQANIRHGETALCISAPAQRAPPKARAR*
Ga0129333_102817811	3300010354	Freshwater To Marine Saline Gradient	MDIAAAPTMIVSNRKVNRFLLLAIATVVKSNAQADIRHGETALCISAPAQRAPPKARAR*
Ga0129336_101331231	3300010370	Freshwater To Marine Saline Gradient	MDIAAAPTMIVSNRKVNRFLLLAIATVVKSNAQADMRHGETALCIKAPAQRAPPKARAR*
Ga0151620_10624962	3300011268	Freshwater	MDIAAAPTMIVSNRKVNRFLLLAIATVVKSNAQANIRHGETALCKSAPAQTAPPKARAL*
Ga0136712_10486042	3300012266	Freshwater	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANVCHGETALCNSAPAQTAPPKARAL*
Ga0164293_100352533	3300013004	Freshwater	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKNKVQTNIRHGDTALWKSAPAQTAPPRARAL*
Ga0164293_100359452	3300013004	Freshwater	MDIAAAPTMIVSKKRVNRFLLLAIAITAKNKAQANIRQGETALCKSAPAHTAPPKARAL*
Ga0164293_101085682	3300013004	Freshwater	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARAL*
Ga0164293_104847222	3300013004	Freshwater	MDIAAAPTMIVSNRKVNRFLLLAIATVVKSNAQADMRHGETALCISAPAQRAPPKARAR*
Ga0164292_100274342	3300013005	Freshwater	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKSKAHANIRQGETALCNSAPAQTAPPTARAL*
Ga0164295_100117433	3300013014	Freshwater	MDIAAAPTMIVSKKRVNRFLLLAIAIPAQNKAHANIRQGETALCNSAPAQTAPPIARAL*
Ga0211736_101327052	3300020151	Freshwater	MIVSKKRVNRFLLLAIAIAAKRKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0211734_106179382	3300020159	Freshwater	MIVSKKRVNRFLLLVIAIAAQSKAHANIRHGETALCNSAPVQTAPPTARAL
Ga0211733_107911472	3300020160	Freshwater	MIVSKKRVNRFLLLAIAIAAQSKAHANIRQGETALCNSAPAQTAPPTARAL
Ga0208593_10240492	3300020511	Freshwater	LIAEFSSDACRIDIAAAPTMIVSTIRVNLFFLLAIVTAAITTAQANIRQGETALWSNAPAQRAPPKARAR
Ga0207938_10102123	3300020525	Freshwater	MIVSKKRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARAL
Ga0208085_10033673	3300020526	Freshwater	RMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL
Ga0208085_10494132	3300020526	Freshwater	APTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNSAPAQTAPPKARAL
Ga0208596_10086821	3300020534	Freshwater	RMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNSAPAQTAPPKARAL
Ga0208596_10141091	3300020534	Freshwater	RMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARAL
Ga0208853_10251621	3300020546	Freshwater	PTMIVSKKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL
Ga0208361_10132912	3300020547	Freshwater	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKSKAHANIRQGETALCNSAPAQTAPPTARAL
Ga0208486_10024453	3300020556	Freshwater	EFSSDACRIDIAAAPTMIVSTIRVNLFFLLAIVTAAITTAQANIRQGETALWSNAPAQRAPPKARAR
Ga0208221_10593321	3300020574	Freshwater	FSSEACRMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNSAPAQTAPPKARAL
Ga0214163_10498263	3300021141	Freshwater	PTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNSAPAQTAPPKARAL
Ga0244775_102895111	3300024346	Estuarine	AAPTMIVSKKRVNRFLLLAIAIAAKSKTHANIRHGETALCNSAPAQTAPPTARAL
Ga0244776_101668522	3300024348	Estuarine	MIVSKKRVNRFLLLAIAIAARNNAQAKMRHGESALCKSAPAQTAPPKARAL
Ga0209616_10084623	3300025091	Freshwater	VIAAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0255076_10105172	3300027141	Freshwater	MIVSKKRVNRFLLLAIAIAAKSKTHANIRHGETALCNSAPAQTAPPTARAL
Ga0255114_10659632	3300027145	Freshwater	AAFSSEAWRIDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0208439_10712762	3300027278	Estuarine	KYSVIAAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAQSKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0255131_10110711	3300027285	Freshwater	IAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0208810_10258343	3300027304	Estuarine	APTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0209358_102662721	3300027804	Freshwater Lake	AAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIVARSKAQANMRHGETALCNSAPAQTAPPKARAL
Ga0209229_100141172	3300027805	Freshwater And Sediment	MIVSKKRVNLFLLLAIAIAARKNEQANMRQGESALCKSAPAQTAPPKARAL
Ga0315899_102010343	3300031784	Freshwater	VIAAFSSEACRIDIAAAPTMIVSKKRVNRFLLLAIAIVARSKAQANMRHGETALCNSAPAQTAPPKARAL
Ga0315906_104019143	3300032050	Freshwater	ACRIDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0315905_102079343	3300032092	Freshwater	MDIAAAPTMIVSNRKVNRFLLLAIATVVKSNAQADMRHGETALCISAPAQRAPPKARAR
Ga0315905_104473681	3300032092	Freshwater	IVSNIKVNLFLLLAIARATKSKAQANIRHGDTALCISAPAQSAPPKARAR
Ga0315905_107980032	3300032092	Freshwater	MIVSKSRVNLFLLLAIATIVESNAQANIRHGETALCISAPAQTAPPKASA
Ga0334980_0017450_2439_2618	3300033816	Freshwater	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARAL
Ga0334982_0334073_545_700	3300033981	Freshwater	MIVSKKKVNLFLLLAIAIAAKSKAHANIRQGETALCNSAPAQTAPPTARAL
Ga0334989_0027985_1_195	3300033984	Freshwater	SDTCRIDIAAAPTIIVSTIRVSLFLLLAIATTARIKAQANIFQGEVALWSNAPAQRAPPKARAR
Ga0334994_0046822_2465_2689	3300033993	Freshwater	LKNSVIAAFSSEACRMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL
Ga0334979_0654523_220_444	3300033996	Freshwater	LKYSVIAAFSSEACRMDIAAAPTMIVSKKKVNLFLLLAIAIAAKSKAHANIRQGETALCNSAPAQTAPPTARAL
Ga0334986_0322277_640_795	3300034012	Freshwater	MIVSKKRVNRFLLLAIAIAAKSKAQANMRHGETALCNSAPAQTAPPKARAL
Ga0334991_0127130_38_217	3300034013	Freshwater	MDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL
Ga0335004_0112325_1492_1716	3300034021	Freshwater	LKNSVIAAFSSEACRMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARAL
Ga0335023_0076674_747_926	3300034050	Freshwater	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKNRAQANIRHGETALWKSAPAQTAPPRARAL
Ga0334983_0062121_1143_1322	3300034060	Freshwater	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKNKAQANIRHGDTALWKSAPAQTAPPRARAL
Ga0334995_0203421_889_1068	3300034062	Freshwater	MDIAAAPTMIVSKKKVNLFLLLVIAIAAKNKAQANIRHGETALWKSAPAQTAPPRARAL
Ga0335020_0161213_736_960	3300034082	Freshwater	LKYSVIAAFSSEACRMDIAAAPTMIVSKKKANLFLLLAIAITAKSKAHANIRQGETALCNSAPAQTAPPTARAL
Ga0335022_0021395_1632_1787	3300034095	Freshwater	MIVSKKRVNRFLLLAIAIAAKSKAQANVRHGETALCNSAPAQTAPPKARAL
Ga0335029_0283777_869_1048	3300034102	Freshwater	MDIAAAPTMIVSNRKVNRFLLLAIATVVKSNAQADMRHGETALCIKAPAQRAPPKARAR
Ga0335035_0521003_325_480	3300034105	Freshwater	MIVSKKKVNLFLLLAIAIAAKNKVQTNIRHGDTALWKSAPAQTAPPRARAL
Ga0335035_0547482_38_262	3300034105	Freshwater	LKNSVIAAFSSEACRMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAQANMRHAETALCNSAPAQTAPPKARAL
Ga0335050_0013940_2068_2247	3300034108	Freshwater	MDIAAAPTMIVSKKKVNLFLLLAIAIAAKNKVQTNIRHGDTALWKSAPAQTAPPRARAL
Ga0335055_0285253_240_395	3300034110	Freshwater	MIVSKKRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARTL
Ga0335054_0659422_149_373	3300034119	Freshwater	LKYSVIAAFSSEACRMDIAAAPTTIVSKKKANLFLLLAIAITAKSKAHANIRQGETALCNSAPAQTAPPTARAL
Ga0335058_0426440_494_718	3300034121	Freshwater	LKYLVIAAFSSDACRMDIAAAPTMIVSRKRVNRFLLLAIAITAQSKAHANIRHGETALCNSAPAQTAPPTARAL
Ga0335017_0016472_4000_4218	3300034167	Freshwater	YSLIAEFSSDACRIDIAAAPTMIVSTIRVNLFFLLAIVTAAITTAQANIRQGETALWSNAPAQRAPPKARAR
Ga0335039_0136869_1117_1341	3300034355	Freshwater	LKNSVITAFSSEACRMDIAAAPTMIVSKKRVNRFLLLAIAIAAKSKAPANIRHGETALCNSAPAQTAPPKARAL
Ga0335048_0102713_735_914	3300034356	Freshwater	MDIAAAPTMIVSKKKANLFLLLAIAITAKSKAHANIRQGETALCNSAPAQTAPPTARAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences