Metagenome / Metatranscriptome Family F072979

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072979
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	56 residues
Representative Sequence	MNKGRFLNQKLGKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNRS
Number of Associated Samples	63
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.88 %
% of genes near scaffold ends (potentially truncated)	35.00 %
% of genes from short scaffolds (< 2000 bps)	63.33 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (23.333 % of family members)
Environment Ontology (ENVO)	Unclassified (92.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (44.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF06271	RDD	30.83
PF13180	PDZ_2	15.83
PF00490	ALAD	4.17
PF04453	LptD	3.33
PF13231	PMT_2	3.33
PF04748	Polysacc_deac_2	2.50
PF00849	PseudoU_synth_2	0.83
PF06439	3keto-disac_hyd	0.83
PF01370	Epimerase	0.83
PF03699	UPF0182	0.83
PF00753	Lactamase_B	0.83
PF02452	PemK_toxin	0.83
PF13546	DDE_5	0.83
PF01895	PhoU	0.83
PF01467	CTP_transf_like	0.83
PF00528	BPD_transp_1	0.83
PF00266	Aminotran_5	0.83
PF05050	Methyltransf_21	0.83
PF14066	DUF4256	0.83
PF02472	ExbD	0.83
PF01555	N6_N4_Mtase	0.83
PF08843	AbiEii	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	30.83
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	4.17
COG1452	LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA)	Cell wall/membrane/envelope biogenesis [M]	3.33
COG2861	Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family	Carbohydrate transport and metabolism [G]	2.50
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.83
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.83
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.83
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.83
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.83
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.83
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.83
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.17 %
Unclassified	root	N/A	10.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.33 %
Unclassified	root	N/A	10.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	55.83 %
Unclassified	root	N/A	10.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.83 %
Unclassified	root	N/A	10.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.17 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.83 %
Unclassified	root	N/A	10.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.83 %
Unclassified	root	N/A	10.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.83 %
Unclassified	root	N/A	10.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.83 %
Unclassified	root	N/A	10.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.83 %
Unclassified	root	N/A	10.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
Hymenobacter daecheongensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → Hymenobacter daecheongensis	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100584191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300009518\|Ga0116128_1131047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300009519\|Ga0116108_1017197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2542	Open in IMG/M
3300009547\|Ga0116136_1176030	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300009548\|Ga0116107_1076007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300009548\|Ga0116107_1208491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009549\|Ga0116137_1218885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300009615\|Ga0116103_1148275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300009616\|Ga0116111_1131675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300009637\|Ga0116118_1146762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300009639\|Ga0116122_1001389	All Organisms → cellular organisms → Bacteria	12241	Open in IMG/M
3300009640\|Ga0116126_1107168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300009641\|Ga0116120_1165868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300009760\|Ga0116131_1063519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300009760\|Ga0116131_1074782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300010339\|Ga0074046_10005339	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → Hymenobacter daecheongensis	10269	Open in IMG/M
3300010339\|Ga0074046_10212901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300010379\|Ga0136449_103547862	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300014151\|Ga0181539_1128899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300014151\|Ga0181539_1317516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300014152\|Ga0181533_1034678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2853	Open in IMG/M
3300014153\|Ga0181527_1087477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1504	Open in IMG/M
3300014156\|Ga0181518_10098368	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300014159\|Ga0181530_10434719	Not Available	663	Open in IMG/M
3300014638\|Ga0181536_10182028	Not Available	1066	Open in IMG/M
3300017823\|Ga0187818_10169454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300017925\|Ga0187856_1028626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2691	Open in IMG/M
3300017925\|Ga0187856_1097400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300017925\|Ga0187856_1135302	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300017929\|Ga0187849_1196632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300017931\|Ga0187877_1193444	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300017941\|Ga0187850_10048580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2204	Open in IMG/M
3300017943\|Ga0187819_10643008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300017961\|Ga0187778_10252319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300017972\|Ga0187781_10031432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3668	Open in IMG/M
3300017975\|Ga0187782_10004166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10813	Open in IMG/M
3300017975\|Ga0187782_10190867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531	Open in IMG/M
3300017975\|Ga0187782_10329147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300017975\|Ga0187782_11377125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300017996\|Ga0187891_1206074	Not Available	669	Open in IMG/M
3300018002\|Ga0187868_1030329	All Organisms → cellular organisms → Bacteria	2483	Open in IMG/M
3300018003\|Ga0187876_1132997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	886	Open in IMG/M
3300018003\|Ga0187876_1178989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300018005\|Ga0187878_1125789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300018014\|Ga0187860_1171954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300018014\|Ga0187860_1247118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300018015\|Ga0187866_1118713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1066	Open in IMG/M
3300018016\|Ga0187880_1039730	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300018016\|Ga0187880_1323292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300018017\|Ga0187872_10024374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3463	Open in IMG/M
3300018020\|Ga0187861_10134742	Not Available	1154	Open in IMG/M
3300018021\|Ga0187882_1175175	Not Available	858	Open in IMG/M
3300018021\|Ga0187882_1271428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300018022\|Ga0187864_10322151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300018022\|Ga0187864_10508432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300018024\|Ga0187881_10022761	All Organisms → cellular organisms → Bacteria	3411	Open in IMG/M
3300018024\|Ga0187881_10105602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1268	Open in IMG/M
3300018040\|Ga0187862_10086923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2190	Open in IMG/M
3300018057\|Ga0187858_10696763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300018058\|Ga0187766_11303681	Not Available	529	Open in IMG/M
3300018062\|Ga0187784_10024421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4876	Open in IMG/M
3300018062\|Ga0187784_10049649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3395	Open in IMG/M
3300018062\|Ga0187784_10130007	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300018062\|Ga0187784_10426886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300018086\|Ga0187769_10018490	All Organisms → cellular organisms → Bacteria	4589	Open in IMG/M
3300018086\|Ga0187769_10074809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2396	Open in IMG/M
3300018086\|Ga0187769_10336357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300018086\|Ga0187769_10903166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300018088\|Ga0187771_10007529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7782	Open in IMG/M
3300018088\|Ga0187771_10018760	All Organisms → cellular organisms → Bacteria	5126	Open in IMG/M
3300018088\|Ga0187771_10056961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3059	Open in IMG/M
3300018088\|Ga0187771_10206397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1631	Open in IMG/M
3300018088\|Ga0187771_10223867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300018088\|Ga0187771_10384066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300018088\|Ga0187771_10618325	Not Available	918	Open in IMG/M
3300018088\|Ga0187771_10657121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300018088\|Ga0187771_11512360	Not Available	570	Open in IMG/M
3300018088\|Ga0187771_11816936	Not Available	517	Open in IMG/M
3300018090\|Ga0187770_10269113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1322	Open in IMG/M
3300018090\|Ga0187770_11364821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300019082\|Ga0187852_1003308	All Organisms → cellular organisms → Bacteria	11883	Open in IMG/M
3300019284\|Ga0187797_1301194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300024233\|Ga0224521_1107730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300025448\|Ga0208037_1022603	Not Available	1449	Open in IMG/M
3300025469\|Ga0208687_1001385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11110	Open in IMG/M
3300025472\|Ga0208692_1020927	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300025498\|Ga0208819_1082430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300027825\|Ga0209039_10199667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300032069\|Ga0315282_10027051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7523	Open in IMG/M
3300032069\|Ga0315282_10615161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300033402\|Ga0326728_10009274	All Organisms → cellular organisms → Bacteria	23784	Open in IMG/M
3300033402\|Ga0326728_10020970	All Organisms → cellular organisms → Bacteria	12366	Open in IMG/M
3300033402\|Ga0326728_10041927	All Organisms → cellular organisms → Bacteria	7090	Open in IMG/M
3300033402\|Ga0326728_10080220	All Organisms → cellular organisms → Bacteria	4195	Open in IMG/M
3300033402\|Ga0326728_10119520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3038	Open in IMG/M
3300033402\|Ga0326728_10410826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300033402\|Ga0326728_10996282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300033405\|Ga0326727_10380598	All Organisms → cellular organisms → Bacteria → Acidobacteria	1311	Open in IMG/M
3300033405\|Ga0326727_10824165	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300033561\|Ga0371490_1134740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300033977\|Ga0314861_0000009	All Organisms → cellular organisms → Bacteria	374132	Open in IMG/M
3300033977\|Ga0314861_0000117	All Organisms → cellular organisms → Bacteria	131549	Open in IMG/M
3300033977\|Ga0314861_0000394	All Organisms → cellular organisms → Bacteria	72108	Open in IMG/M
3300033977\|Ga0314861_0000808	All Organisms → cellular organisms → Bacteria	45376	Open in IMG/M
3300033977\|Ga0314861_0001124	All Organisms → cellular organisms → Bacteria	37024	Open in IMG/M
3300033977\|Ga0314861_0001673	All Organisms → cellular organisms → Bacteria	27160	Open in IMG/M
3300033977\|Ga0314861_0002070	All Organisms → cellular organisms → Bacteria	22851	Open in IMG/M
3300033977\|Ga0314861_0002229	All Organisms → cellular organisms → Bacteria	21250	Open in IMG/M
3300033977\|Ga0314861_0004023	All Organisms → cellular organisms → Bacteria	13327	Open in IMG/M
3300033977\|Ga0314861_0004205	All Organisms → cellular organisms → Bacteria	12931	Open in IMG/M
3300033977\|Ga0314861_0007071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8839	Open in IMG/M
3300033977\|Ga0314861_0017634	All Organisms → cellular organisms → Bacteria	4636	Open in IMG/M
3300033977\|Ga0314861_0030081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3256	Open in IMG/M
3300033977\|Ga0314861_0070557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1861	Open in IMG/M
3300033977\|Ga0314861_0187107	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300033977\|Ga0314861_0234959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300033977\|Ga0314861_0277536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300033977\|Ga0314861_0355099	Not Available	650	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.83%
Aquatic	Environmental → Aquatic	49.17%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.17%
Soil	Environmental → Terrestrial → Soil	40.83%
Peat	Environmental → Terrestrial → Peat	10.00%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	47.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	40.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.00%
Lake	Environmental → Aquatic → Freshwater → Lake	1.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	40.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	30.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	15.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	23.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	22.50%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	15.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	15.00%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	9.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1005841912	3300004152	Bog Forest Soil	MNKGRFLNQKLGKRASRKMTLLKSSLSAIRQPLRPEALATRFPKKGASREKGLNPKLGGS
Ga0116128_11310471	3300009518	Peatland	FTRHSMNKGRFLNQKLGKRASRKIALLKSSLSTMRQPGRPEALATRFPKKGASREKGLNPRLGGR*
Ga0116108_10171974	3300009519	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNFKVGR*
Ga0116136_11760302	3300009547	Peatland	MNKGRLLNQKLGKRASRKIALLKSSLSAVRQPLRLEASATRFPKKGASREKGLSPKLGGR
Ga0116107_10760071	3300009548	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPLRPEASATRFPKKGASREKGLNRS*
Ga0116107_12084911	3300009548	Peatland	TFTRHSMNKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPTTRFPKKGASREKGLNPYS*
Ga0116137_12188851	3300009549	Peatland	TRHSMNKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPTTRFPKKGASREKGLNPYS*
Ga0116103_11482752	3300009615	Peatland	NKGRFLNQKLGKRASRKIALLKSSLSTMRQPGRPEALATRFPKKGASREKGLNPRLGGR*
Ga0116111_11316751	3300009616	Peatland	TFTRHSMNKGRFLNQKLGKRASRKIALLKSSLSAVRQPLRLEASATRFPKKGASREKGLSPKLGGR*
Ga0116118_11467621	3300009637	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPLRAEASATRFPKKGASREN
Ga0116122_100138912	3300009639	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPLRPEASAPRFPKKGASREKGPESEVRS*
Ga0116126_11071682	3300009640	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTIRQPSRTEASATRFPKKGASREKGPNP*
Ga0116120_11658682	3300009641	Peatland	PTFTRHSMNKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPTTRFPKKGASREKGLNPYS*
Ga0116131_10635191	3300009760	Peatland	TFPTFTRHSMNKGRFLNQKLGKRASRKIALLKSSLSAIRQPLRPEASATRFPKKGASREKGLNRS*
Ga0116131_10747821	3300009760	Peatland	NKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPTTRFPKKGASREKGLNPYS*
Ga0074046_100053391	3300010339	Bog Forest Soil	MNKGRFLNQKLGKRASRKMTLLKSSLSAIRQPLRPEALAARFPKKGASREKGLNPKLGGS
Ga0074046_102129012	3300010339	Bog Forest Soil	MNKGRFLNQKLGKRASRKIALLKSSLATSRLSGRAEALATRFPKKGVSREKSVGERLK*
Ga0136449_1035478621	3300010379	Peatlands Soil	MNKGRFLNQKLGKRASRKIALLKSSLSTMRPPGRPEALAARFPKKGASREKGLTPKSGGG
Ga0181539_11288991	3300014151	Bog	NQKLGKRASRKIALLKSSLSASRQSRRPEAPATHFPKKGASREKGLNFKAGR*
Ga0181539_13175161	3300014151	Bog	LGKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNPKLGGR*
Ga0181533_10346783	3300014152	Bog	MNKGRFLNQKLGKRASRKIALLKSSLATRRQPGRLEASATRFPKKGASREKGLYPKI*
Ga0181527_10874771	3300014153	Bog	AFTRHSMNKGRFLNQKLGKRASRKIALLKSSLSTMRQPGRPEALATRFPKKGASREKGLNPRLGGR*
Ga0181518_100983682	3300014156	Bog	MNKGRFLNQKLGKQASRKIALLKSSLSTIRQPSRTEASATRFPKKGASREKGPNP*
Ga0181530_104347191	3300014159	Bog	MNKGRFLNQKLGKRASRKIALLKSSLAARRQPARSEASAPGFPKKGASREKGLNPKFGGKG*
Ga0181536_101820282	3300014638	Bog	MNKGRFLNQKLGKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNRS*
Ga0187818_101694542	3300017823	Freshwater Sediment	MNKGRFLNQKLGKRASRQRVLLKSSLAASHPVGRPDALATRFPKKGASREKGPYPKAGE
Ga0187856_10286262	3300017925	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAVRQPLRLEASATRFPKKGASREKGLSPKLGGR
Ga0187856_10974002	3300017925	Peatland	FTRHSMNKGRFLNQKLGKRASRKIALLKSSLSTMRQPGRPEALATRFPKKGASREKGLNPRLGGR
Ga0187856_11353022	3300017925	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNPKLGGR
Ga0187849_11966322	3300017929	Peatland	MNKGRFLNQKLGKRVSRKIALLKSSLSAIRQPGRPEASATRFPKKGASREKGLNRS
Ga0187877_11934442	3300017931	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNFKVGR
Ga0187850_100485801	3300017941	Peatland	GKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNFKAGR
Ga0187819_106430081	3300017943	Freshwater Sediment	MNKGRFLNQKLGKRASRKIALLKSSLATSRQTGRAEALATRFPKKGASREKSLGERLK
Ga0187778_102523191	3300017961	Tropical Peatland	KGRFLNQKLGKRTSRQRVLLKSSLRAGHPVGRPEALAPRFPKKGASREKGLFFKINE
Ga0187781_100314322	3300017972	Tropical Peatland	VNKGRFLNQKLGKRASRKVALLKSSLATSRQPGRAEILATRFPKKGVSRENR
Ga0187782_100041668	3300017975	Tropical Peatland	MNKGRFLNQKLGKRASRKIALLKSTLSTIRQPRRAETLAARFPKKGVSREKGL
Ga0187782_101908672	3300017975	Tropical Peatland	MNKGRFLNQKLGKRASHKTALLKSSLATGRQLGRPGASVTRFPKKGASREEVPYPQVGGR
Ga0187782_103291472	3300017975	Tropical Peatland	MNKGRFLNQKLGKRASRKIALLKSSLAAGRQPGRADVLGPRFPKKGVSRENSQFPKWV
Ga0187782_113771252	3300017975	Tropical Peatland	ESKAMNKGRFLNQKLGKRASRKIGLLKSSLVAGRQPGRPDVLGPRFPKKGVSRENR
Ga0187891_12060741	3300017996	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLAARRQPARSEASAPGFPKKGASREKGLNPKFGGK
Ga0187868_10303293	3300018002	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAVRQPLRLEASATRFHKKGASREKGLSPKLGGR
Ga0187876_11329971	3300018003	Peatland	MNKGRFLNQKLGKRTSRKIALLKSSLSTGHRPDRPHDSAAHFPKKRASREKPLSPKAI
Ga0187876_11789891	3300018003	Peatland	TFTRHSMNKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPTTRFPKKGASREKGLNPYS
Ga0187878_11257892	3300018005	Peatland	MNKGRFLNQKLGKRASRQRALLKSSLAAGHPVGRPEALATRFPKKGASREK
Ga0187860_11719541	3300018014	Peatland	FLNQKLGKRASRKIALLKSSLAARRQPARSEASAPGFPKKGASREKGLNPKFGGKG
Ga0187860_12471181	3300018014	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTMRQPGRPEALATRFPKKGASREKGLNPRLGGR
Ga0187866_11187131	3300018015	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLATGRQPGRPEALATRFPKKGASREKGLN
Ga0187880_10397301	3300018016	Peatland	TRHSMNKGRFLNQKLGKRASRKIALLKSSLSAIRQPLRPEASATRFPKKGASREKGLNRS
Ga0187880_13232922	3300018016	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTIRQPSRTEASATRFPKKGASREKGPNP
Ga0187872_100243742	3300018017	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLAARRQPARSEASAPGFSKKGASREKGLNPKFGGK
Ga0187874_102800331	3300018019	Peatland	QKLGKRASRKIALLKSSLSAIRQPLRPEASATRFPKKGASREKGLNRS
Ga0187861_101347422	3300018020	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPLRPEASATRFPKKGASREKGLNRS
Ga0187882_11751751	3300018021	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTMRQPGRPEALATRFPKKGASREKGLNFKVGR
Ga0187882_12714281	3300018021	Peatland	IEAMNKARFLNQKLGKRASRQRALLKSSLAAGHPVGRPEALATRFPKKGASREKGQYPKAGE
Ga0187864_103221512	3300018022	Peatland	NKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPTTRFPKKGASREKGLNPYS
Ga0187864_105084321	3300018022	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPATRFPKKG
Ga0187881_100227612	3300018024	Peatland	MNKGRFLNQKLGKRASRKMALLKSSLSAIRQPLRPEALATRFPKKGASREKGLNPKLGGS
Ga0187881_101056022	3300018024	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPGRPEASATRFPKKGASREKGLNRS
Ga0187862_100869233	3300018040	Peatland	FTRHSMNKGRFLNQKLGKRASRKIALLKSSLSTIRQPGRPEALATRFPKKGASREKGLNFKVGR
Ga0187858_106967632	3300018057	Peatland	NKGRFLNQKLGKRASRKIALLKSSLSAVRQPLRLEASATRFPKKGASREKGLSPKLGGR
Ga0187766_113036812	3300018058	Tropical Peatland	GRFLNQKLGKRASRQSALLKSSLAAGRKVGRPEALPARFPKKGASREKGPTTGFTA
Ga0187784_100244212	3300018062	Tropical Peatland	MNKGRFLNQKLGKRASRKIGLLKSSLSTFRQPARPAAWPTRFPKKGASRDKGL
Ga0187784_100496492	3300018062	Tropical Peatland	MNKGRFLNQKLGKRASRKVALLKSSLVAGRQPGRPDVLGPRFPKKGVSRENR
Ga0187784_101300072	3300018062	Tropical Peatland	MKKGRFLNQKLGKRASRKIALLKSSLATGRQRGRAEILAPRFPKKGVSRENTQSRGASE
Ga0187784_104268862	3300018062	Tropical Peatland	MNKGRFLNQKLGKRASHKTALLKSSLATGRQRGRPGASVTRFPKKGASREEVPYPQVGGR
Ga0187769_100184904	3300018086	Tropical Peatland	MKKGRFLNQKLGKRASRKIALLKSSLATGRQPGRAEILATRFPKKGVSRGNSQFRRASE
Ga0187769_100748093	3300018086	Tropical Peatland	MNKGRFLNQKLGKRASRKIGLLKSSLVAGRQPGRPDVLGPRFPKKGVSRENR
Ga0187769_103363571	3300018086	Tropical Peatland	MSKGRFLNQKLGKRASRKIALLKSSLSTFRQPGRPEAFTSRSPKKGASREKGP
Ga0187769_109031661	3300018086	Tropical Peatland	MSKGRFLNQKLGKRASRKITLLKSSLSTFRQPGRPEVLTSYSPKKGASREKGP
Ga0187771_100075292	3300018088	Tropical Peatland	MNKGRFLNQKLGKRASRKIALLKSSLATSRQPGRAEILATRFPKKGVSRENR
Ga0187771_100187603	3300018088	Tropical Peatland	MNKGRFLNQKLGKRASRKVALLKSSLSTIRQPARPEVPFARFPKKGASREKSA
Ga0187771_100569612	3300018088	Tropical Peatland	MNKGRFLNQKLGKRTSRQRVLLKSSLRAGYPVGRPEALAPRFPNKGASREKGLFSKINE
Ga0187771_102063972	3300018088	Tropical Peatland	MNKGRFLNQKLGKRASRKMTLLKSSLSAIRQPLRPEALATRFSKKGASREKGLNRS
Ga0187771_102238672	3300018088	Tropical Peatland	MNKGRFLNQKLGKRASRKIALLKSSLATGRPAGRREALASRFPKKGASREKGLYPKVGE
Ga0187771_103840662	3300018088	Tropical Peatland	MNKGRFLNQKLGKRASRKMALLKSNLAIGRPLGLREALAKRFPKRGASREEVPYPKAGSR
Ga0187771_106183251	3300018088	Tropical Peatland	GRFLNQKLGKRASRKMALLKSSLAMGRQSGRTKASATRFPKKGDSREKGPTTGLRI
Ga0187771_106571211	3300018088	Tropical Peatland	MNKGRFLNQKLGKRASRKMAFLKASLAAGRARGRPEAPATRFPKKGASRDKGPTTGFRI
Ga0187771_115123602	3300018088	Tropical Peatland	MNKGRFLNQKLGKRASRKIALLKSSLATGRQPRRAEILATRFPKKGVSRESGQSPKASE
Ga0187771_118169362	3300018088	Tropical Peatland	CETKAMNKGRFLNQKLGKRASRKMALLKSSLATGRPAGQREALATRFPKKGASREEVPYPQVGGRS
Ga0187770_102691132	3300018090	Tropical Peatland	MNKGRFLNQKLGKRASRKMTLLKSSLSAIRQPLRPEALATRFPKKGASREKGLNPKLGGG
Ga0187770_113648211	3300018090	Tropical Peatland	NQKLGKRASRKIALLKSSLATSRQPGRAEILATRFPKRGVSRENR
Ga0187852_10033081	3300019082	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPLRPEASAPRFPKKGASREKGPESEVRS
Ga0187797_13011941	3300019284	Peatland	MSKGRFLNQKLGKRASRKIALLKSSLSTFRQPGRPEVLTSYSPKKGASREKGP
Ga0224521_11077301	3300024233	Soil	MNKGRFLNQKLGKRASRKIALLKSSLATRRQPVRSEASAPGFPKKGASRE
Ga0208037_10226032	3300025448	Peatland	KGRFLNQKLGKRASRKIALLKSSLSAIRQPLRPEASAPRFPKKGASREKGPESEVRS
Ga0208687_10013851	3300025469	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPGRPEALATRFPKKGASREKGLNPKLGGR
Ga0208692_10209273	3300025472	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAVRQPLRLEASATRFPK
Ga0208819_10824302	3300025498	Peatland	TRHSMNKGRFLNQKLGKRASRKIALLKSSLSASRQPRRPEAPTTRFPKKGASREKGLNPY
Ga0209039_101996672	3300027825	Bog Forest Soil	MHKGRFLNQKLGKRASRQIALLKSSLSASRQPRRPEAPAARFPKKGAS
Ga0315282_100270517	3300032069	Sediment	MNKGRFLNQKLGKRTSRQRALLKSSLAAGHSVGRPDALARHFPKKGASREKSFYTKAGE
Ga0315282_106151612	3300032069	Sediment	MNKGRFLNQKLGKRASRQRALLKSSLAAGRPVGRSEALATRFPKKGASREKGLYPKAGE
Ga0326728_100092743	3300033402	Peat Soil	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPSRPEASATRFPKKGASREKGLNPS
Ga0326728_1002097010	3300033402	Peat Soil	MNKGRFLNQKLGKRASRKIALLKSSLSAVRQPLRLEASATRFPKKGASREKGLNPKLDGR
Ga0326728_100419271	3300033402	Peat Soil	MKGFLNQKLGKRTSRKVALLKSTLATRQPPARPADPARLFPKKGTSRQKP
Ga0326728_100802201	3300033402	Peat Soil	KLGKRASRKMALLKSSFSAIRQPLRPEAMATRFPKKGASREKGLNPKLGGS
Ga0326728_101195203	3300033402	Peat Soil	MNKGRFLNQKLGKRASRKMALLKSSFSAIRQPLRPEAMATRFPKKGASREKGLNPKLGGS
Ga0326728_104108262	3300033402	Peat Soil	MSKGRFLNQKLGKRASRKIALLKSSLSATRQARQTEAPAA
Ga0326728_109962822	3300033402	Peat Soil	MNKGRFLNQKLGKRTSRKTALLKSSLSAIRQPRRLEAPATRFPKKGASREKGLNP
Ga0326727_100181443	3300033405	Peat Soil	MSKMRFVNQKLGKRPSRKIALLKSSLSTRRPPVRLEPSGTRLPKK
Ga0326727_103805981	3300033405	Peat Soil	MKGFLNQKLGKRTSRKVALLKSTLATRQPTARPADPARLFPKKGTSRQKP
Ga0326727_108241652	3300033405	Peat Soil	MNKGFLNQKLGKRASRKTALLKSSFAARPRPALPEAASVRFPKKGASRQKP
Ga0371490_11347402	3300033561	Peat Soil	TFTRHSMNKGRFLNQKLGKRASRKIALLKSSLSAIRQPSRPEASATRFPKKGASREKGLNPS
Ga0314861_0000009_259536_259715	3300033977	Peatland	MNKGRFLNQKLGKRASRKMALLKSSLATSRPPVGSKASVARFPKKGASREKGPTTGLVI
Ga0314861_0000117_107627_107806	3300033977	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLAAGRAAGRREALATRFPKKGASREKGPTTGFTI
Ga0314861_0000394_23830_23988	3300033977	Peatland	MNKGRFLNQKLGKRASRKVALLKSSLSTIRQPARPEISSARFPKKGTSRENS
Ga0314861_0000808_31323_31484	3300033977	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSTFRQPGRPEVSATRFPKKGASREKGP
Ga0314861_0001124_21979_22158	3300033977	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLAMGRSAGRREALATRFPKKGASREKGLYPKVGG
Ga0314861_0001673_3093_3275	3300033977	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLATGRPAGRREALATRFPKKGASREKGLYPKLGGR
Ga0314861_0002070_17411_17572	3300033977	Peatland	MNKGRFLNQKLGKRASRKIALLKSSFAATHPPARPEAPATRFPKKGASRERGL
Ga0314861_0002229_17826_18005	3300033977	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLSAIRQPVRSEALATRFPKKGDSREKGRTTGFRI
Ga0314861_0004023_400_579	3300033977	Peatland	MNKGRFLNQKLGKRTSRQMVLLKSSLRAGHPVGRPEALAPRLPKKGASREKGLFSKINE
Ga0314861_0004205_5611_5787	3300033977	Peatland	MNKGRFLNQKLGKRASRKIALLKSSLATSRQLGRAEILATRFPKKGVSRENSQFPRAS
Ga0314861_0007071_7981_8160	3300033977	Peatland	MNKGHFLNQKLGKRASRKIALLKSSLATGRPAARREALATRFPKKGASREKGLYPKVGK
Ga0314861_0017634_3883_4044	3300033977	Peatland	MNKGRFLNQKLGKRTSRKIALLKSSLSTIRQLGRPEALATRFPKKGASREKGP
Ga0314861_0030081_2414_2584	3300033977	Peatland	MNKGRFLNQKLGKQASRKIALLKSSLSASRQLRRPEAPATRFPKKGASREKGLNPK
Ga0314861_0070557_1465_1626	3300033977	Peatland	MNKGRFLNQKLGKRASRKVALLKSSLSTIRQPARPEVPSARFPKKGASREKGP
Ga0314861_0187107_523_699	3300033977	Peatland	MKKGRFLNQKLGKRTSRKIALLKSSLSTGRKPGWPQAATAHFPKKGASREKVVKPKVI
Ga0314861_0234959_372_533	3300033977	Peatland	MNKGRFLNQKLGKRASRKVALLKSSLSTIRQPARPEVPSARFPKKGASREKGA
Ga0314861_0277536_297_458	3300033977	Peatland	MNKGRFLNQKLGKRASRKVALLKSSLSSIRQPARPEVPSARFPKKGASREKGA
Ga0314861_0355099_2_157	3300033977	Peatland	NQKLGKRASRKIALLKSSLATSRQLGRAEILATRFPKKGVSREDSLFPKAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072979

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences