Metagenome Family F072978

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072978
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	102 residues
Representative Sequence	LGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSTRDPVEIDLDGITCADRAGGQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR
Number of Associated Samples	69
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.67 %
% of genes near scaffold ends (potentially truncated)	44.17 %
% of genes from short scaffolds (< 2000 bps)	76.67 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (74.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (35.000 % of family members)
Environment Ontology (ENVO)	Unclassified (80.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.65% β-sheet: 23.39% Coil/Unstructured: 45.97%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
c.13.2.1: Anti-sigma factor antagonist SpoIIaa	d1vc1a_	1vc1	0.79105
c.13.2.0: automated matches	d6m37b_	6m37	0.73217
c.13.2.1: Anti-sigma factor antagonist SpoIIaa	d1th8b_	1th8	0.71944
c.14.1.2: Tail specific protease, catalytic domain	d1fc6a4	1fc6	0.67301
c.1.8.5: Type II chitinase	d1jnda1	1jnd	0.67273

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF07690	MFS_1	37.50
PF02954	HTH_8	22.50
PF13492	GAF_3	1.67
PF13185	GAF_2	0.83
PF12903	DUF3830	0.83
PF12697	Abhydrolase_6	0.83
PF13632	Glyco_trans_2_3	0.83
PF00543	P-II	0.83
PF13229	Beta_helix	0.83
PF01261	AP_endonuc_2	0.83
PF01894	UPF0047	0.83
PF00528	BPD_transp_1	0.83
PF00005	ABC_tran	0.83
PF13581	HATPase_c_2	0.83
PF03992	ABM	0.83
PF14559	TPR_19	0.83
PF00011	HSP20	0.83
PF13801	Metal_resist	0.83
PF04055	Radical_SAM	0.83
PF01292	Ni_hydr_CYTB	0.83
PF14294	DUF4372	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	0.83
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.83
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.83
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.83
COG3038	Cytochrome b561	Energy production and conversion [C]	0.83
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.83
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.17 %
Unclassified	root	N/A	25.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.17 %
Unclassified	root	N/A	25.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.17 %
Unclassified	root	N/A	25.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.17 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009518\|Ga0116128_1190474	Not Available	578	Open in IMG/M
3300009519\|Ga0116108_1175638	Not Available	632	Open in IMG/M
3300009548\|Ga0116107_1170928	Not Available	587	Open in IMG/M
3300009615\|Ga0116103_1000975	All Organisms → cellular organisms → Bacteria → Acidobacteria	13738	Open in IMG/M
3300009616\|Ga0116111_1031536	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300009616\|Ga0116111_1163523	Not Available	523	Open in IMG/M
3300009621\|Ga0116116_1200211	Not Available	511	Open in IMG/M
3300009629\|Ga0116119_1035393	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300009760\|Ga0116131_1120490	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010339\|Ga0074046_10005465	All Organisms → cellular organisms → Bacteria	10149	Open in IMG/M
3300010339\|Ga0074046_10025779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	4053	Open in IMG/M
3300010339\|Ga0074046_10208938	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300010343\|Ga0074044_10155869	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300010379\|Ga0136449_100012009	All Organisms → cellular organisms → Bacteria	23617	Open in IMG/M
3300010379\|Ga0136449_102641985	Not Available	715	Open in IMG/M
3300014152\|Ga0181533_1351557	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300014155\|Ga0181524_10010315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7580	Open in IMG/M
3300014155\|Ga0181524_10162688	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300014156\|Ga0181518_10155305	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300014158\|Ga0181521_10344938	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300014158\|Ga0181521_10520675	Not Available	566	Open in IMG/M
3300014160\|Ga0181517_10003766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14240	Open in IMG/M
3300014490\|Ga0182010_10144876	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
3300014496\|Ga0182011_10143095	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300014499\|Ga0182012_10992068	Not Available	528	Open in IMG/M
3300014638\|Ga0181536_10479124	Not Available	544	Open in IMG/M
3300014654\|Ga0181525_10407841	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300014655\|Ga0181516_10177232	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300014838\|Ga0182030_10021795	All Organisms → cellular organisms → Bacteria	11974	Open in IMG/M
3300014839\|Ga0182027_10029827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7108	Open in IMG/M
3300014839\|Ga0182027_11098149	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300017925\|Ga0187856_1024754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2971	Open in IMG/M
3300017925\|Ga0187856_1155935	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300017925\|Ga0187856_1265318	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300017925\|Ga0187856_1271127	Not Available	592	Open in IMG/M
3300017929\|Ga0187849_1059393	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300017929\|Ga0187849_1082545	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300017931\|Ga0187877_1071915	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300017935\|Ga0187848_10397804	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300017935\|Ga0187848_10466548	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300017938\|Ga0187854_10113802	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300017941\|Ga0187850_10188542	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300017941\|Ga0187850_10278005	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300017943\|Ga0187819_10390234	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300017946\|Ga0187879_10285483	Not Available	917	Open in IMG/M
3300017972\|Ga0187781_10490284	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300017975\|Ga0187782_10101935	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300017975\|Ga0187782_10347016	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300017988\|Ga0181520_10011472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11634	Open in IMG/M
3300017988\|Ga0181520_10930328	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300017998\|Ga0187870_1095509	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300018003\|Ga0187876_1041644	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300018003\|Ga0187876_1093306	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300018003\|Ga0187876_1279359	Not Available	537	Open in IMG/M
3300018004\|Ga0187865_1013593	All Organisms → cellular organisms → Bacteria	4218	Open in IMG/M
3300018004\|Ga0187865_1130453	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300018005\|Ga0187878_1314533	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300018013\|Ga0187873_1072447	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300018013\|Ga0187873_1099971	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300018013\|Ga0187873_1183561	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300018013\|Ga0187873_1352614	Not Available	537	Open in IMG/M
3300018014\|Ga0187860_1105941	Not Available	1270	Open in IMG/M
3300018015\|Ga0187866_1162278	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300018017\|Ga0187872_10048709	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300018019\|Ga0187874_10272239	Not Available	692	Open in IMG/M
3300018023\|Ga0187889_10032452	All Organisms → cellular organisms → Bacteria	2953	Open in IMG/M
3300018023\|Ga0187889_10224087	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300018024\|Ga0187881_10385429	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300018024\|Ga0187881_10435844	Not Available	536	Open in IMG/M
3300018025\|Ga0187885_10476920	Not Available	556	Open in IMG/M
3300018026\|Ga0187857_10195158	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018030\|Ga0187869_10337277	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300018030\|Ga0187869_10426755	Not Available	631	Open in IMG/M
3300018030\|Ga0187869_10484293	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300018042\|Ga0187871_10110539	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300018043\|Ga0187887_10120988	Not Available	1572	Open in IMG/M
3300018062\|Ga0187784_10539710	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300018088\|Ga0187771_10574555	Not Available	955	Open in IMG/M
3300018088\|Ga0187771_11861085	Not Available	511	Open in IMG/M
3300018090\|Ga0187770_10139495	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300018090\|Ga0187770_10200605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1536	Open in IMG/M
3300019082\|Ga0187852_1081012	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300019082\|Ga0187852_1327585	Not Available	606	Open in IMG/M
3300019082\|Ga0187852_1384403	Not Available	549	Open in IMG/M
3300025506\|Ga0208937_1041270	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300027825\|Ga0209039_10016111	All Organisms → cellular organisms → Bacteria	3979	Open in IMG/M
3300029889\|Ga0246001_1027128	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300029922\|Ga0311363_11157691	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300029955\|Ga0311342_10900542	Not Available	668	Open in IMG/M
3300030659\|Ga0316363_10266203	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300030688\|Ga0311345_10121652	All Organisms → cellular organisms → Bacteria → Acidobacteria	2889	Open in IMG/M
3300032893\|Ga0335069_10005023	All Organisms → cellular organisms → Bacteria	19465	Open in IMG/M
3300032893\|Ga0335069_10779185	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300032893\|Ga0335069_12432648	Not Available	543	Open in IMG/M
3300032897\|Ga0335071_10313024	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300032897\|Ga0335071_11313651	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300032897\|Ga0335071_12116281	Not Available	506	Open in IMG/M
3300033402\|Ga0326728_10008055	All Organisms → cellular organisms → Bacteria → Acidobacteria	26522	Open in IMG/M
3300033402\|Ga0326728_10008241	All Organisms → cellular organisms → Bacteria	26026	Open in IMG/M
3300033402\|Ga0326728_10026857	All Organisms → cellular organisms → Bacteria	10133	Open in IMG/M
3300033402\|Ga0326728_10053887	All Organisms → cellular organisms → Bacteria	5774	Open in IMG/M
3300033402\|Ga0326728_10079822	All Organisms → cellular organisms → Bacteria	4212	Open in IMG/M
3300033402\|Ga0326728_10133506	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300033402\|Ga0326728_10179965	All Organisms → cellular organisms → Bacteria → Acidobacteria	2190	Open in IMG/M
3300033402\|Ga0326728_10458395	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300033402\|Ga0326728_10631271	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300033402\|Ga0326728_10695311	Not Available	765	Open in IMG/M
3300033402\|Ga0326728_10735875	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300033402\|Ga0326728_10961639	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300033402\|Ga0326728_10975714	Not Available	590	Open in IMG/M
3300033402\|Ga0326728_11186407	Not Available	508	Open in IMG/M
3300033405\|Ga0326727_10057701	All Organisms → cellular organisms → Bacteria	5907	Open in IMG/M
3300033405\|Ga0326727_10151667	All Organisms → cellular organisms → Bacteria → Acidobacteria	2732	Open in IMG/M
3300033405\|Ga0326727_10250985	All Organisms → cellular organisms → Bacteria → Acidobacteria	1826	Open in IMG/M
3300033405\|Ga0326727_10324871	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300033405\|Ga0326727_10411697	Not Available	1233	Open in IMG/M
3300033405\|Ga0326727_10789506	Not Available	735	Open in IMG/M
3300033755\|Ga0371489_0483357	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300033977\|Ga0314861_0002645	All Organisms → cellular organisms → Bacteria	18531	Open in IMG/M
3300034091\|Ga0326724_0031509	All Organisms → cellular organisms → Bacteria	4238	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	55.00%
Terrestrial	Environmental → Terrestrial	45.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	55.00%
Soil	Environmental → Terrestrial → Soil	23.33%
Peat	Environmental → Terrestrial → Peat	21.67%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	55.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.50%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	45.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	35.00%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	18.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.00%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.33%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.33%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.50%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.67%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.83%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116128_11904741	3300009518	Peatland	VLRTTVLYFRDRTKVVLNGQLVAEWAECLPKAVARCCSTQDAVEIDLDGITCADRAGEQALLALWRAHGRFLCTSPFARALCEHLGIPVEGDSR*
Ga0116108_11756381	3300009519	Peatland	SSTIVSTYIKKTYKPTELGQEAALILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVALCCSTRDTVEIDLDGITCADRAGEQALLSLWRARRRFLCTSPFARTLCEHLGIPVEGNSR*
Ga0116107_11709281	3300009548	Peatland	EAALILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVARCCSTRDTVEIDLDGITCADRAGEQALLSLWRARRRFLCTSPFARTLCEHLGIPVEGNSR*
Ga0116103_10009754	3300009615	Peatland	MPVSIKFTKDYAPTTLGKEAALILGVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAVAHCCSTRDAVEIDLDGITCVDRAGEQALLSLSRAHGRFRCTFPFARALCEHLGIPVEGDS*
Ga0116111_10315362	3300009616	Peatland	MRAFATSPDAPRMPVSIKITKDYAPTTLGKEAALILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDRITCADRAGGQALLSLWRAHRRFVCTSLFARALCEGLGIPVEGDSR*
Ga0116111_11635231	3300009616	Peatland	TSPFRTILTIANYRAPCQPLGTRGILNTLLIRVSIEITRGYALTTLGKETALFLVVLRTTILYFRDRIKVVLSGQLVAEWAECLPKAVAQCCSTRDSVEIDLDGITCADRAGEQALLSLSRAHGRFRCTSPFARALCEGLGIPVEGDSR*
Ga0116116_12002111	3300009621	Peatland	DYAPTTLGKEAALILGVLRTTILYLRDRTKIVLSGQLVAEWAECLPKAIAQCCSPRDPLEIHLDGVTCVDRAGEEALLSLSRAQGCFRCTSPFVRALCEHLGIPVEGDSP*
Ga0116119_10353932	3300009629	Peatland	VLRTTILYLRDRTKVVLSGQLVAEWAECLPKAIAQCCSTRDGVEVDLDRITCADRAGEQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR*
Ga0116131_11204902	3300009760	Peatland	ILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDRITCADRAGGQALLSLWRAHRRFVCTSLFARALCEGLGIPVEGDSR*
Ga0074046_100054653	3300010339	Bog Forest Soil	VTVLRATVLYLRDRTKVVLSGQLVAEWAECLPKAIAQCCSTQDPVEVDLDGITCADCAGEQALLSLWRAHRRFLCSSPFARTLCEHLGIPVEGDSR*
Ga0074046_100257791	3300010339	Bog Forest Soil	MIKNYELSTFGKKFALVAFVLRTTVLFLRDRTKVLLRGQLVGEWAECLPRAIANCCPDREVEIDLDGVTCADRAGEKALLALSRAHRHFVCTSWFARALCEGLGIPVEGNT*
Ga0074046_102089382	3300010339	Bog Forest Soil	MEDAFILVVLRTTVLYLRDRTRIVLSGQLAGEWAESLPRVLAQCCPAGAIEIDLDGITCADHTGEQALLALWRDHRRLVCTSLFARALCEGLGIPVEEGAR*
Ga0074044_101558692	3300010343	Bog Forest Soil	VLRTTVLYLRDRVRIVLNGQLAGEWAESLPMTLAQCCPAGVVEIDLDGITCADHTGEQALLTLWRDHRRFVCTSVFARALCEGLGIPVEEGAR*
Ga0136449_1000120095	3300010379	Peatlands Soil	MIVLRTTVLYLRDRVRVVLKGQLAGEWAESLPRALAQCCPAGVVEIDLDGITCADQTGEQALLALWRDHRRFVCTSLFARALCEGLGIPVEESAR*
Ga0136449_1026419852	3300010379	Peatlands Soil	MPGKESALSVVMLRTTILYLRDRTKVVLSGQLVGEWAECLPKAVPQCCPTRDDVEIDLDGITCVDCAGEEALLSLWHAHGRFLCTFPFPRALCERLGISIESDSR*
Ga0181533_13515571	3300014152	Bog	GQLVAEWAECLPKAVAQCCSPRDPVEIDLDGITCADRAGGQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR*
Ga0181524_100103156	3300014155	Bog	MLVSIEITRDYALTTLGKEAALILVVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDGITCADRAGEHALLSLWRAHGRFRCTSPFARTLCEHLGIPVEGDSQ*
Ga0181524_101626882	3300014155	Bog	AAFILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDRITCADRAGGQALLSLWRAHRRFVCTSLFARALCEGLGIPVEGDSR*
Ga0181518_101553051	3300014156	Bog	VLRTTILYLRDRTKVVLKGQLVAEWAECLTKGVAQCCSTGDAVEIDLDGITCADHAGEEALLALWRAHGRFRCTSPFARVLCEHLGIPIEGDSRYPPLPPLSRVGG
Ga0181521_103449382	3300014158	Bog	MLRTTFLYQRDQTKLVLSGELVGEGAKCLSRAIAQCCSTPETVVIDLDGITCVDRDGEEALLSLWRAHRRFICTSSYALALCERLGIPVEGNHP*
Ga0181521_105206752	3300014158	Bog	DYAPTTLGKEAALTLVVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAIAQCCSTQDPVEVDLDGITCADRAGEHALLSLWQAHRRFLCTSPFARTLCEHLGIPVEGDSR*
Ga0181517_100037666	3300014160	Bog	MHLKDKQVGAEVALILSMLRTTILYLRDRVKVVLSGQLVGEWADCLPNAVPQCCSNQDEVEIDLDGITCVDHAGEEALLTLSRSRGRFLCTSPFARTLCERLGIPVEGDCR*
Ga0182010_101448762	3300014490	Fen	MLQTTILYLRDRIKVVPSGQLVGEWAECLPKAVPQCCSPQDPVEIDLDGITCVDRAGEEALLTLWRARGRFICTSPFARTLCDRLGIPIEGDSR*
Ga0182011_101430952	3300014496	Fen	VVVIRTSILYLRDRTRVVLSGQLVGEGAGCLSRAIAQYFSAQDTVEIDLDGITCADGAGEQALLFLWQAHYCFRCTSPFAQSLCVRLGIPVEGDCR*
Ga0182012_109920681	3300014499	Bog	MLRTTILYLHDRVKVIPSGQLVGEWAECLPKAVPNGGAIHDPVEIDLDGITCVDRVGEEALLALSEANGHFFCTSTFARALCDRLGIHVSGERP*
Ga0181536_104791241	3300014638	Bog	TLGKEAALTLVVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAIAQCCSTQDPVEVDLDGITCADRAGEHALLSLWQAHRRFLCTSPFARTLCEHLGIPVEGDSR*
Ga0181525_104078411	3300014654	Bog	MLQTTILYLHDRIKVVPSGQLVGEWAECLPKAVPQAGHGGDPVEIDLDGITCVDRAGEEALLALWEAHGHFYCTSPFARALCTRLGIHITGVGH*
Ga0181516_101772322	3300014655	Bog	MDGSLRAITVGMLQTTILYLHDRIKVVPSGQLVGEWAECLPKAVPHAGSGGDPVEIDLDGITCVDRAGEEALLRLWEAHGHFYCTSPFAQALCNRLGIHVTGVGH*
Ga0182030_100217954	3300014838	Bog	MLVSIEITKDYVPTPPGKEAALIPVVLRTTILYLRDRTKVILNGQLVGEWAECLPQAVAQCCSTRNTVEIDLDGITCADGAGEEALLSLWRAHRLFICASPYARTLCEHLGIPVEGDSR*
Ga0182027_100298272	3300014839	Fen	MHLKVKWVGAEVALILIVLRTTILYLRDRVKVVLSGQLVGEWADCLPNAVPQCCSNQDDVEIDLDGITCVDHAGEEALLILSQSRGRFLCTSPFARILCGRLGIPVEGDSR*
Ga0182027_110981492	3300014839	Fen	MLRTSILYLRDRTRIVLSGQLVGEGAKCLSRAIAQYFSTQDTVEIDLDGITCVDRAGEEALVSLFQAYGRFLGTSPFARALCERLGIPVEGDSR*
Ga0187856_10247542	3300017925	Peatland	VLRTTILYLRDRTKVVLSGQLVAEWAECLPKAIAQCCSTRDGVEVDLDRITCADRAGEQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR
Ga0187856_11559352	3300017925	Peatland	LGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSTRDPVEIDLDGITCADRAGGQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR
Ga0187856_12653181	3300017925	Peatland	VQVMLRTTILYQRDRTKLVLSGELVGEGAKCLSRAIAQCCSTPDTVVIDLDGITCVDRAGEEALLSLWRAHRRFLCTSSQALALCERLGIPVESDNP
Ga0187856_12711272	3300017925	Peatland	MVMLRTTILYLRDRVKVVPSGQLVGEWAVCLPKAVPQCCSTQDEVEIDLDGITCVDRAGEEALISLWRAHGHFHCRSPFARALCGRLGIPIEEESR
Ga0187849_10593932	3300017929	Peatland	MRAFATSPDAPRMPVSIKFTKDYAPTTLGKEAALILGVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAVAHCCSTRDAVEIDLDGITCVDRAGEQALLSLSRAHGRFRCTFPFARALCEHLGIPVEGDS
Ga0187849_10825451	3300017929	Peatland	FTKDYAPTTLGKEAALILGVLRTTILYLRDRTKIVLSGQLVAEWAECLPKAIAQCCSPRDPLEIHLDGVTCVDRAGEEALLSLSRAQGCFRCTSPFVRALCEHLGIPVEGDSP
Ga0187877_10719152	3300017931	Peatland	MPVSIEFTKDYAPTTLGKEAALILGVLRTTILYLRDRTKIVLSGQLVAEWAECLPKAIAQCCSPRDPLEIHLDGVTCVDRAGEEALLSLSRAQGCFRCTSPFVRALCEHLGIPVEGDSP
Ga0187848_103978041	3300017935	Peatland	LLYLQDQTKLVLSGQLVGEGAKCLSRAIVHCRSTPDTVLIDLDAITCVDRAGEEALLSLWRAHRRFLCTSPFARTLCERLGIPVEGNSQ
Ga0187848_104665482	3300017935	Peatland	DRVKVVPSGQLVGEWAVCLPKAVPQCCSTQDEVEIDLDGITCVDRAGEEALLTLWRAHGRFLCTSPFARALCERLGIPVAGDSR
Ga0187854_101138021	3300017938	Peatland	VLRTTILYLRDRTKVVLSGQLVAEWAECLPKAIAQCCSTRDGVEVDLDRITCADRAGEQALLSLWRAHRRFLCTTPFARTLCEHLGIPVEGDSR
Ga0187850_101885422	3300017941	Peatland	MCSGCATNHHPLFARSGQSVLNGQLVGEWADCLPKAIAQCCPEGEVEIDLDGITCADHAGEQALLALWQAHRRLVCTSPFARAVCDHLGIPAEGVSR
Ga0187850_102780051	3300017941	Peatland	LILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDGITCADRVGEQALLSLWRAHRRFLCTSPFVRALCEHLGIPVEGDSR
Ga0187819_103902341	3300017943	Freshwater Sediment	TKVVLKGPLVGEWAASLPKAIADCCPVGDVEIDLDGITCADRAGERALQVLWEAHRRFVGTSLFARALCAGLGIPVEEFGQ
Ga0187879_102854832	3300017946	Peatland	MLVSIEITKDYVPTPPGKEAALIPVVLRTTILYLRDRTKVILNGQLVGEWAECLPQAVAQCCSTRNTVEIDLDGITCADGAGEEALLSLWRAHRLFICASPYARTLCEHLGIPVEGDSR
Ga0187781_104902842	3300017972	Tropical Peatland	LRPLGEEAAVNVGVLRTTVLYLRDRTKVVLKGQLVGEWAESLPKAIDQCCSPTDPVEIDLDGITCVDRAGEQALLALWQAHRLLVGTSLFPRALCAGLGIPVEEGGR
Ga0187782_101019352	3300017975	Tropical Peatland	MENAFDLGVLRTTVLYLRDQTKVVLNGQLVGEWADSLPGAIAQCCSPTDPVEIDLDGVTCADPAGEKALLALWQAHRCFVCSSLFGRALCAGLGIPVEEGGR
Ga0187782_103470161	3300017975	Tropical Peatland	RVVLKGQLAGERAETLTGTIARCCPGGEVEIDLDGITCADHAGERALLALFEAHRHFVCTSLFARAVCEALGIPVEESAR
Ga0181520_100114726	3300017988	Bog	MHLKDKQVGAEVALILSMLRTTILYLRDRVKVVLSGQLVGEWADCLPNAVPQCCSNQDEVEIDLDGITCVDHAGEEALLTLSRSRGRFLCTSPFARTLCERLGIPVEGDCR
Ga0181520_109303281	3300017988	Bog	KVVLKGQLVAEWAECLTKGVAQCCSTGDAVEIDLDGITCADHAGEEALLALWRAHGRFRCTSPFARVLCEHLGIPIEGDSRYPPLPPLSRVGGRR
Ga0187870_10955091	3300017998	Peatland	LVLVVLRTTVLYLRDQTRVVLNGQLVGEWADCLPDAIAQCCSPTDPVEINLDGITCADHLGEQALLALWQAHRRFVCTSLFGRALCEGLGIPVEGVSR
Ga0187876_10416441	3300018003	Peatland	TALTLVVLRTTILYLRDRTKVVLKGQLVAEWAECLTKGVAQCCSTGDAVEIDLDGITCADHAGEEALLALWRAHGRFRCTSPFARVLCEHLGIPIEGDSRYPPLPPLSRVGGRR
Ga0187876_10933062	3300018003	Peatland	MRAFATSPDAPRMPVSIKITKDYAPTTLGKEAALILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSTRDPVEIDLDGITCADRAGGQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR
Ga0187876_12793591	3300018003	Peatland	MLRTTILYQRDRTKLVLSGELVGEGAKCLSRAIAQCCSTPDTVVIDLDGITSVDRAGEEALLSLWRAQRHFLCTAPFARTLCERLGIPVEGDKQ
Ga0187865_10135932	3300018004	Peatland	VLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDGITCADRVGEQALLSLWRAHRRFLCTSPFVRALCEHLGIPVEGDSR
Ga0187865_11304531	3300018004	Peatland	RTKVVLSGQLVAEWAECLPKAIAQCCSTRDGVEVDLDRITCADRAGEQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR
Ga0187878_13145331	3300018005	Peatland	LRTTILYFRDRIKVVLSGQLVAEWAECLPKAVAQCCSTRDSVEIDLDGITCADRAGEQALLSLSRAHGRFRCTSPFARALCEGLGIPVEGDSR
Ga0187873_10724471	3300018013	Peatland	MPVSIKFTKDYAPTTLGKEAALILGVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAVAHCCSTRDAVEIDLDGITCVDRAGEQALLSLSRAHGRFRCTFPFARALCEHLGIPVEGDS
Ga0187873_10999712	3300018013	Peatland	VLRTTVLYFRDRTKVVLNGQLVAEWAECLPKAVARCCSTQDAVEIDLDGITCADRAGEQALLALWRAHGRFLCTSPFARALCEHLGIPVEGDSR
Ga0187873_11835612	3300018013	Peatland	VLRTTILYLRDRVKVVLNGQLVGEWADCLPKAIAQCCPEGEVEIDLDGITCADHTGEQALLALWQAHRRLVCTSSFPRAVCDHLGIPVEGVSR
Ga0187873_13526141	3300018013	Peatland	MPVSIKFTKDYAPTTLGKEAALILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSTRDPVEIDLDGITCADRAGGQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR
Ga0187860_11059412	3300018014	Peatland	MDYAPTALGKESALILGVLRTTILYLRDRTKVVLRGQLVAEWAECLPRAIGQCCPAPGTVEIDLDGITCVDRAGEQALLSLWQAHRLFLCTSPFARTLCEHLGIPVEGGSR
Ga0187866_11622781	3300018015	Peatland	IAKYRASCQHLGTRGILNALLIRVSIEITKDYALTTLGKETALFLVVLRTTILYFRDRIKVVLSGQLVAEWAECLPKAVAQCCSTRDSVEIDLDGITCADRAGEQALLSLSRAHGRFRCTSPFARALCEGLGIPVEGDSR
Ga0187872_100487093	3300018017	Peatland	VLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDGITCADRAGGQALLSLWRDHRRFVCTSLFARALCEGLGIPVEGDSR
Ga0187874_102722391	3300018019	Peatland	VLRTTVLYLRDRVKVVLTGQLVGEWADCLPKAVAQCCPSGEVEIDLDGITCADHAGEQALLALWQAHRRFICTSLFGRALCEGLGIPVEGGSR
Ga0187889_100324523	3300018023	Peatland	KEAALTLVVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAIAQCCSTRDGVEVDLDRITCADRAGEQALLSLWRAHRRFLCTSPFARTLCEHLGIPVEGDSR
Ga0187889_102240872	3300018023	Peatland	SILVARSYIPGPAGIENALVLVVLRTTVLYLRDQTRLVLNGQLVGEWADCLPDAIAQCCSPTDPVEINLDGITCADHLGEQALLALWQAHRRFVCTSLFGRALCEGLGIPVEGGSR
Ga0187881_103854292	3300018024	Peatland	RTKVVLKGQLVAEWAECLTKGVAQCCSTGDAVEIDLDGITCADHAGEEALLALWRAHGRFRCTSPFARVLCEHLGIPIEGDSRYPPLPPLSRVGGRR
Ga0187881_104358442	3300018024	Peatland	CQHLGTRGILNALLIRVSIEITKDYALTTLGKETALFLVVLRTTILYFRDRIKVVLSGQLVAEWAECLPKAVAQCCSTRDSVEIDLDGITCADRAGEQALLSLSRAHGRFRCTSPFARALCEGLGIPVEGDSR
Ga0187885_104769201	3300018025	Peatland	VVVLRTTILYLRDRIRIVLKGQLVGEWAESLPEVIAQCCSPTDAVEIDLDGITYADHVGEQVLLTFWKAHRRFVCNSIFARALCERLGIPVEEDGR
Ga0187857_101951582	3300018026	Peatland	VLRTTILYLRDRTKVVLKGQLVAEWAECLPKAVAHCCSTRDAVEIDLDGITCVDRAGEQALLSLSRAHGRFRCTFPFARALCEHLGIPVEGDS
Ga0187869_103372771	3300018030	Peatland	TILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSTRDSVEIDLDGITCADRAGEQALLSLSRAHGRFRCTSPFARALCEGLGIPVEGDSR
Ga0187869_104267551	3300018030	Peatland	YIKKTYKPTELGQEAALILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVARCCSTRDTVEIDLDGITCADRAGEQALLSLWRARRRFLCTSPFARTLCEHLGIPVEGNSR
Ga0187869_104842931	3300018030	Peatland	MPVSIEFTKDYAPTTLGKEAALILGVLRTTILYLRDRTKIVLSGQLVAEWAECLPKAIAQCCSPRDPLEIHLDGVTCVDRAGEEALLSLSRAQGCFRCTSPFVRALCEHLGIPVEGDS
Ga0187871_101105391	3300018042	Peatland	AALLDASWMLVSIEITKDYVPTPPGKEAALIPVVLRTTILYLRDRTKVILNGQLVGEWAECLPQAVAQCCSTRNTVEIDLDGITCADGAGEEALLSLWRAHRLFICASPYARTLCEHLGIPVEGDSR
Ga0187887_101209884	3300018043	Peatland	CLPQAVAQCCSTRNTVEIDLDGITCADGAGEEALLSLWRAHRLFICASPYARTLCEHLGIPVEGDSR
Ga0187784_105397102	3300018062	Tropical Peatland	MENAFDLGVLRTTVLYLRDQTKVVLNGQLVGEWADSLPGAIAQCCSPTDPVEIDLDGVTCADPAGEKALLALWQAHRCFVCSSLFGRALCAGLGIPVEEGRR
Ga0187771_105745552	3300018088	Tropical Peatland	MSYGFACHGTEHAFVLVVLRITVLYLRDRVRVVLNGQLVGEWADCLPEAIAECCTAREVEIDLDGITCADGSGEQALLTLWQEHRRFTCTSLFARALCEGLGIPVEKGGQ
Ga0187771_118610851	3300018088	Tropical Peatland	MTVLRATILYLRDRTKVVLSGQLVAEWAECLPKAIAQCCSTRDAVEIDLDGITCADRVGERALLSLWRAHLRFLCTSPFARTLCEHLGIPVEGGSR
Ga0187770_101394952	3300018090	Tropical Peatland	MENAFNLGVLRTTVLYLRDQTKVVLNGQLVGEWADSLPGAIAQCCSPTDSVEIDLDGVTCADPAGEKALLALWQAHRRFVCTSLFGRALCAGLGIPVEEGGR
Ga0187770_102006052	3300018090	Tropical Peatland	LTIANYRAACQHLGTRGIPSTPRTLVSIEITEDYAPTTLGKEAALILVVLRTTILYLRDRTKVVLKGQLVAEWAECLPKALAQCCSTEDPIEIDLDGITCADRAGEQALLSLWRAHRRFLCTSPFARTLCEHLGIPIERDSR
Ga0187852_10810122	3300019082	Peatland	MVMLRTTILYLRDRVKVVPSGQLVGEWAVCLPKAVPQCCSTQDEVEIDLDGITCVDRDGEEALLSLWRAHRRFRCTSPFARTLCARLGIPVEGDSQ
Ga0187852_13275852	3300019082	Peatland	VLRTTILYLRDRTKVVLKGQLVAEWAECLTKGVAQCCSTGDAVEIDLDGITCADHAGEEALLALWRAHGRFRCTSPFARVLCEHLGIPIEGDSRYPPLP
Ga0187852_13844031	3300019082	Peatland	MLRTTILYQRDRTELVLSGELVGEGAKCLSRAIAQCCSTPDTVVIDLDGITCVDRDGEEALLSLWGAHRQFLCTSSYALALCERLGIPVESDNP
Ga0208937_10412701	3300025506	Peatland	PVSIKFTKDYAPTTLGKEAALILGVLRTTILYLRDRTKVVLSGQLVAEWAECLPKAVAQCCSPRDPVEIDLDRITCADRAGGQALLSLWRAHRRFVCTSLFARALCEGLGIPVEGDSR
Ga0209039_100161112	3300027825	Bog Forest Soil	MLGKKAALTLVVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAIAQCCSTEDPVEVDLDGITCADRAGEQALLSLWRAHRRFLCTSPFARTLCEHLGIPIEVDSR
Ga0246001_10271282	3300029889	Peat	GPAGYGTEHACVLVVLRTTILYLRDRVKVVLNGQLVGEWADCLPKAIAQCCPEGEVEIDLDGITCADHAGEQALLALWQAHRRLVCTSPFARAVCDHLGIPAEGVSR
Ga0311363_111576911	3300029922	Fen	DFPHGAAIAIIVGMLRTTILYLHDRVKVIPSGQLVGEWAECLPKAVPNGGAIHDPVEIDLDGITCVDRVGEEALLALSEANGHFFCTSTFARALCDRLGIHVSGERP
Ga0311342_109005421	3300029955	Bog	MLRTTILYLHDRVKVIPSGQLVGEWAECLPKAVPNGGAIHDPVEIDLDGITCVDRVGEEALLALSEANGHFFCTSTFARALCDRLGIHVSGER
Ga0316363_102662031	3300030659	Peatlands Soil	GPQDAFIMIVLRTTVLYLRDRVRVVLKGQLAGEWAESLPRALAQCCPAGVVEIDLDGITCADQTGEQALLALWRDHRRFVCTSLFARALCEGLGIPVEESAR
Ga0311345_101216521	3300030688	Bog	MLRTTILYLHDRVKVIPSGQLVGEWAECLPKAVPNGGAIHDPVEIDLDGITCVDRVGEEALLALSEANGHFFCTSTFARALCDRLGIHVSGERP
Ga0335069_100050233	3300032893	Soil	VLRTTVIYLRDRTRVVLYGRLVGEWAESLPKAIEQCCPAANVEIDLDGITCADRAGEQALLTLWRTHRRFVCRSFFARALCEGLKIPVERGEQ
Ga0335069_107791852	3300032893	Soil	MACGGTAHADIQFVLRTTILYLRDRVRVVLKGQLVGEWAECLPSALAQCCPGPNVEIDLDGITCADHTGEQALLALWRANRRFVGTSILALALCESLGIAVDRGDL
Ga0335069_124326482	3300032893	Soil	MLRTTVIYLRDRAKVVLQGQLVGEWADCVPRTIADFCPAGEVEIDLDGITCADHAGERALLTLRDAHRHFVCNSLFGQALCESLGIPVERNVP
Ga0335071_103130241	3300032897	Soil	ADIQFVLRTTILYLRDRVRVVLKGQLVGEWAECLPSALAQCCPGPNVEIDLDGITCADHAGEQALVALWHANRRFVGTSVFSLALGGSLGIPVDRGEQ
Ga0335071_113136511	3300032897	Soil	VLRTTVLYLRGHVKVVLNGQLVGEWADCLPNAIAQCCPKGEAEIDLSGITCADSVGRQALLTLHREHHHFVCTTLFARALC
Ga0335071_121162812	3300032897	Soil	EPKKNGPTDAFVLVMLRTTVLYLRDRVKVVLNGQLVGEWANCLQQTLTQYCSEGEVEIDLDGITCADRAGEQALLALQNRHRHFVCTSPFARALCRGLGIPVEEGK
Ga0326728_1000805523	3300033402	Peat Soil	MRYEWTALGSEDAFILVVLTTTVRHSRDRVRVVLNGQLTGEWVDCLARAVAECSPGAEMEIDLDSITRVDRIGEQALLALWQARRRFICTSIFARALCEGLGIPIEEGAR
Ga0326728_1000824116	3300033402	Peat Soil	MPVSIEFTRDYTPTTPGKKAALIVVVLRTTVLYLRDQTKVVLRGQLVGQWAESLPKAIDQCCSPTDPVEIDLDGITCVDHAGEQALLALWQAHRRFVCTSLFARALCEGLGIPVEGGDR
Ga0326728_100268572	3300033402	Peat Soil	MLRTTFLYQRDQTKLVLSGELVGEGAKCLSRAIAQCCSTPETVVIDLDGITCVDRDGEEALLSLWRAHRRFICTSSYALALCERLGIPVEGNHP
Ga0326728_100538873	3300033402	Peat Soil	MLRTTILYQRDQTKLVLSGELVGEGAKCLSRAIAQCCSTPDTVVIGLDGITCVDRDGEEALLSLRRAHRRFTCTSPFARTLCERLGITVEGDSQ
Ga0326728_100798222	3300033402	Peat Soil	MIVLRTTVLYLRDRVRVVLKGQLAGEWAESLPRALAQCCPEGVVEIDLDGITCADQTGEQALLTLWREHRCFVCTSLFARALCEGLGIPVEEGVR
Ga0326728_101335064	3300033402	Peat Soil	VLCVLRTSILYLRDRTKVVLSGQLVRQWAECLPKVISQYCSAQDIVEIDLDGITCVDHAGEEALLSLQQAHGRFLCASPFARTLCERLGVSVEGDRR
Ga0326728_101799652	3300033402	Peat Soil	MLVSIELTKDYAPTTLGKEAALTLVVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAVAQCCSPQNPVEVDLDGITCADRAGEQALLSLWRAHLRVLCTSPFARTLCEHLGISVEGDSR
Ga0326728_104583952	3300033402	Peat Soil	MPGIVVALILDMLRTTILYLRDHVKVVPSGQLVGEWAECLPKAIPKCCSTQDDIEIDLDGITCVDRAGEEALLTLWRARGRFLCTSPFARTLCERLGIPVAGDSR
Ga0326728_106312711	3300033402	Peat Soil	VVVLRITVVYLRDRTKVVLNGELVGDCADRLPKTVEQCCPSVDVEIDLDGITCADRAGEQALLALWRAHRRFVCTSLFPHALCQGLGIPLEGGKA
Ga0326728_106953111	3300033402	Peat Soil	FGKEAALIVVVLRTTVLYLRDRTKVVLNGQLTGEWADCLPNAVAGCCPAGEVEIDLDGITCADRAGEQALLALWKAHRCFICTSPFARTLCEHLGIPVEEGSR
Ga0326728_107358752	3300033402	Peat Soil	VLRTTVLYLRDRTKVVLKGQLVGEWADSLPQAIDQCCPAAGVEIDLDGITCVDRAGEQALLTLWQAHRRFVCTSLFGRALCAGLGIPVEEGGR
Ga0326728_109616391	3300033402	Peat Soil	LSAKNTIGYGPASYGTECACVLAVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAIAQCCSARDTVEIDLDGITCTDLAGEEALLSLWRAYRRFLCTSPFARALCEHLGIPVEGARR
Ga0326728_109757142	3300033402	Peat Soil	MLTALGREAAFIVVMLRTTILYLRDRTKVIPNGQLIGEWAECLPKAVPQCCSPQDDVEIDLDGITCVDRAGEEALLTLWRARGRFLCTTP
Ga0326728_111864071	3300033402	Peat Soil	MVMLRTTILYLPDRTKIVLSGELVGEGAKCLSRAIAQCYPTPDTVVIDLDGITCVDRAGEEALLSLWLARRRFLCTSPFARALCERLEIPVEGDSQ
Ga0326727_100577013	3300033405	Peat Soil	MKAALVLCVLRTSILYLRDRTKVVLSGQLVRQWAECLPKVISQYCSAQDIVEIDLDGITCVDHAGEEALLSLQQAHGRFLCASPFARTLCERLGVSVEGDRR
Ga0326727_101516672	3300033405	Peat Soil	MLTALGREAAFIVVMLRTTILYLRDRTKVIPNGQLIGEWAECLPKAVPQCCSPQDDVEIDLDGITCVDRAGEEALLTLWRARGRFLCTTPFARTLCERLGIPVEGDGR
Ga0326727_102509852	3300033405	Peat Soil	VLRTTILYLRNRTKVVLKGQLVAEWAECLPKALAQCCSTEDPVEVDLDGITCADRAGEQALLSLWRAHRRFLCTSPFARTLCEHLGIPIEADSR
Ga0326727_103248711	3300033405	Peat Soil	LTKDYAPTTLGKEAALTLVVLRTTILYLRDRTKVVLKGQLVAEWAECLPKAVAQCCSPQNPVEVDLDGITCADRAGEQALLSLWRAHLRVLCTSPFARTLCEHLGISVEGDSR
Ga0326727_104116972	3300033405	Peat Soil	VLRTTVLYLRDRTKVVLKGQLVAEWAESLPNAIAQCCPTRDAVEIDLDGITCVDRAGENALLCLWQAHRLFRCTSLFARAICERLGIPVEGENR
Ga0326727_107895062	3300033405	Peat Soil	MLRTTIIYLRDRTRIVLSGQLVGEGAKCLSRSITQCYPTPETVEIDLDGITCVDRGGEEALLSLQIAHGHFLCTSPFARTLCERLGIPVEGNSP
Ga0371489_0483357_3_245	3300033755	Peat Soil	MDWTVLRTTVLYFRDRVKVVLNGQLVGEWADCLPKAIAQCCSGGEVEIQLDGITCADRRGGQALLALAKARRRFVCTSPFA
Ga0314861_0002645_2113_2421	3300033977	Peatland	MKNAFDLGVLRTTVLYLRDQTRVVLNGQLVGEWADSLPGAVAQCCSPTDSVEIDLDGVTCADPAGEKALLALWQARRRFVCSSLFGRALCAGLGIPVEEGGR
Ga0326724_0031509_419_727	3300034091	Peat Soil	MGAALVLCVLRTSILYLRDRTKVVLSGQLVRQWAECLPKVISQYCSAQDIVEIDLDGITCVDHAGEEALLSLQQAHGRFLCASPFARTLCERLGVSVEGDRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072978

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences