Metagenome Family F072930

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072930
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	54 residues
Representative Sequence	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATV
Number of Associated Samples	67
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.50 %
% of genes near scaffold ends (potentially truncated)	96.67 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (52.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.667 % of family members)
Environment Ontology (ENVO)	Unclassified (91.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.30% β-sheet: 0.00% Coil/Unstructured: 53.70%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04392	ABC_sub_bind	11.67
PF00571	CBS	4.17
PF16177	ACAS_N	2.50
PF07732	Cu-oxidase_3	2.50
PF03401	TctC	1.67
PF02586	SRAP	1.67
PF00005	ABC_tran	1.67
PF00313	CSD	1.67
PF02735	Ku	1.67
PF01527	HTH_Tnp_1	1.67
PF03625	DUF302	0.83
PF02746	MR_MLE_N	0.83
PF13460	NAD_binding_10	0.83
PF09821	AAA_assoc_C	0.83
PF00027	cNMP_binding	0.83
PF01593	Amino_oxidase	0.83
PF13602	ADH_zinc_N_2	0.83
PF12680	SnoaL_2	0.83
PF00501	AMP-binding	0.83
PF00582	Usp	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	11.67
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	2.50
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	1.67
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.67
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.67
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.67
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
All Organisms	root	All Organisms	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
cellular organisms	root	All Organisms → cellular organisms	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.33 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.67 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	1.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	1.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.67 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.50 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	5.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.33 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	1.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.83 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100820567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	767	Open in IMG/M
3300005332\|Ga0066388_103334620	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300006086\|Ga0075019_10855367	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010360\|Ga0126372_10959884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	863	Open in IMG/M
3300010430\|Ga0118733_106708825	Not Available	600	Open in IMG/M
3300016270\|Ga0182036_10164010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1596	Open in IMG/M
3300016270\|Ga0182036_10718588	Not Available	809	Open in IMG/M
3300016270\|Ga0182036_11438648	Not Available	578	Open in IMG/M
3300016294\|Ga0182041_10380033	Not Available	1196	Open in IMG/M
3300016294\|Ga0182041_10824962	Not Available	830	Open in IMG/M
3300016294\|Ga0182041_11022193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300016294\|Ga0182041_11159371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	704	Open in IMG/M
3300016294\|Ga0182041_11486008	Not Available	623	Open in IMG/M
3300016319\|Ga0182033_10880303	Not Available	792	Open in IMG/M
3300016319\|Ga0182033_11316692	Not Available	649	Open in IMG/M
3300016319\|Ga0182033_11535961	Not Available	601	Open in IMG/M
3300016341\|Ga0182035_10101005	Not Available	2113	Open in IMG/M
3300016341\|Ga0182035_10263361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1397	Open in IMG/M
3300016341\|Ga0182035_11565445	Not Available	594	Open in IMG/M
3300016341\|Ga0182035_11643073	Not Available	580	Open in IMG/M
3300016357\|Ga0182032_10469993	Not Available	1029	Open in IMG/M
3300016357\|Ga0182032_10620079	Not Available	901	Open in IMG/M
3300016357\|Ga0182032_11084492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300016371\|Ga0182034_10474392	Not Available	1039	Open in IMG/M
3300016371\|Ga0182034_10843063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	786	Open in IMG/M
3300016371\|Ga0182034_11325259	Not Available	628	Open in IMG/M
3300016404\|Ga0182037_10082562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2261	Open in IMG/M
3300016404\|Ga0182037_10502822	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300016422\|Ga0182039_10285268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1361	Open in IMG/M
3300016422\|Ga0182039_10314131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303	Open in IMG/M
3300016422\|Ga0182039_11299133	Not Available	659	Open in IMG/M
3300016422\|Ga0182039_12026091	Not Available	530	Open in IMG/M
3300016422\|Ga0182039_12083522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	522	Open in IMG/M
3300016445\|Ga0182038_10191340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1602	Open in IMG/M
3300016445\|Ga0182038_10386350	Not Available	1170	Open in IMG/M
3300016445\|Ga0182038_10778170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300017930\|Ga0187825_10263492	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300018006\|Ga0187804_10461410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	568	Open in IMG/M
3300027703\|Ga0207862_1154859	Not Available	685	Open in IMG/M
3300027898\|Ga0209067_10487468	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031231\|Ga0170824_122407469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	504	Open in IMG/M
3300031543\|Ga0318516_10054044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2192	Open in IMG/M
3300031545\|Ga0318541_10006918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4885	Open in IMG/M
3300031545\|Ga0318541_10281193	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031546\|Ga0318538_10003069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5919	Open in IMG/M
3300031546\|Ga0318538_10341136	Not Available	809	Open in IMG/M
3300031546\|Ga0318538_10831110	Not Available	502	Open in IMG/M
3300031561\|Ga0318528_10234458	Not Available	984	Open in IMG/M
3300031572\|Ga0318515_10108554	Not Available	1460	Open in IMG/M
3300031573\|Ga0310915_10015621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4517	Open in IMG/M
3300031573\|Ga0310915_10428830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	939	Open in IMG/M
3300031640\|Ga0318555_10043669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2245	Open in IMG/M
3300031668\|Ga0318542_10036324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2159	Open in IMG/M
3300031679\|Ga0318561_10041421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2271	Open in IMG/M
3300031719\|Ga0306917_10175308	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300031744\|Ga0306918_10015857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4432	Open in IMG/M
3300031744\|Ga0306918_10096527	Not Available	2094	Open in IMG/M
3300031748\|Ga0318492_10004097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5479	Open in IMG/M
3300031751\|Ga0318494_10767583	Not Available	565	Open in IMG/M
3300031768\|Ga0318509_10091267	Not Available	1629	Open in IMG/M
3300031770\|Ga0318521_11036049	Not Available	504	Open in IMG/M
3300031771\|Ga0318546_10369994	Not Available	999	Open in IMG/M
3300031771\|Ga0318546_11130270	Not Available	550	Open in IMG/M
3300031780\|Ga0318508_1244507	Not Available	515	Open in IMG/M
3300031781\|Ga0318547_10665874	Not Available	646	Open in IMG/M
3300031781\|Ga0318547_10673305	Not Available	643	Open in IMG/M
3300031782\|Ga0318552_10061329	Not Available	1802	Open in IMG/M
3300031794\|Ga0318503_10190450	Not Available	664	Open in IMG/M
3300031795\|Ga0318557_10049653	Not Available	1760	Open in IMG/M
3300031798\|Ga0318523_10625632	Not Available	529	Open in IMG/M
3300031819\|Ga0318568_10930139	Not Available	537	Open in IMG/M
3300031821\|Ga0318567_10698854	Not Available	575	Open in IMG/M
3300031833\|Ga0310917_10153792	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300031833\|Ga0310917_10247651	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300031833\|Ga0310917_10506388	Not Available	821	Open in IMG/M
3300031835\|Ga0318517_10003359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4990	Open in IMG/M
3300031859\|Ga0318527_10239526	Not Available	771	Open in IMG/M
3300031879\|Ga0306919_10150781	Not Available	1695	Open in IMG/M
3300031879\|Ga0306919_10551567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300031880\|Ga0318544_10341615	Not Available	581	Open in IMG/M
3300031890\|Ga0306925_10409624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1452	Open in IMG/M
3300031890\|Ga0306925_10672151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300031893\|Ga0318536_10020335	Not Available	3002	Open in IMG/M
3300031893\|Ga0318536_10139363	Not Available	1230	Open in IMG/M
3300031894\|Ga0318522_10057935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1381	Open in IMG/M
3300031897\|Ga0318520_10071272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1885	Open in IMG/M
3300031910\|Ga0306923_10222277	Not Available	2160	Open in IMG/M
3300031910\|Ga0306923_10461262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1440	Open in IMG/M
3300031910\|Ga0306923_10572211	Not Available	1271	Open in IMG/M
3300031912\|Ga0306921_10659695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1205	Open in IMG/M
3300031912\|Ga0306921_10663639	Not Available	1201	Open in IMG/M
3300031912\|Ga0306921_12519217	Not Available	533	Open in IMG/M
3300031941\|Ga0310912_10119461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1962	Open in IMG/M
3300031941\|Ga0310912_10122037	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300031941\|Ga0310912_10170898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1650	Open in IMG/M
3300031942\|Ga0310916_10694096	Not Available	861	Open in IMG/M
3300031942\|Ga0310916_11165503	Not Available	638	Open in IMG/M
3300031942\|Ga0310916_11422044	Not Available	567	Open in IMG/M
3300031945\|Ga0310913_10129670	Not Available	1728	Open in IMG/M
3300031945\|Ga0310913_11109215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031947\|Ga0310909_10478717	Not Available	1044	Open in IMG/M
3300031947\|Ga0310909_11383997	Not Available	563	Open in IMG/M
3300031954\|Ga0306926_10050849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4957	Open in IMG/M
3300031954\|Ga0306926_10262557	Not Available	2139	Open in IMG/M
3300031954\|Ga0306926_11010185	Not Available	989	Open in IMG/M
3300031954\|Ga0306926_11633416	Not Available	738	Open in IMG/M
3300031981\|Ga0318531_10121152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300032001\|Ga0306922_10542015	Not Available	1237	Open in IMG/M
3300032001\|Ga0306922_11654231	Not Available	635	Open in IMG/M
3300032035\|Ga0310911_10288447	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300032039\|Ga0318559_10003306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5162	Open in IMG/M
3300032044\|Ga0318558_10694864	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300032090\|Ga0318518_10004804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5164	Open in IMG/M
3300032261\|Ga0306920_100169325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3257	Open in IMG/M
3300032261\|Ga0306920_100630745	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300032261\|Ga0306920_100770288	Not Available	1414	Open in IMG/M
3300032261\|Ga0306920_100985680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	1228	Open in IMG/M
3300032261\|Ga0306920_102091226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	790	Open in IMG/M
3300032261\|Ga0306920_102250656	Not Available	756	Open in IMG/M
3300033290\|Ga0318519_10932154	Not Available	537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.00%
Aquatic	Environmental → Aquatic	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.00%
Freshwater	Environmental → Aquatic → Freshwater	2.50%
Sediment	Environmental → Aquatic → Sediment	1.67%
Marine	Environmental → Aquatic → Marine	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Loam	Environmental → Terrestrial → Soil → Loam	1.67%
Coastal	Environmental → Aquatic → Marine → Coastal	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	92.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1008205672	3300004152	Bog Forest Soil	MAVTFVRSALMVPGKFPQAQQYLEKRIKWLKEKFGVEASLMVLLG
Ga0066388_1033346202	3300005332	Tropical Forest Soil	MAVTFVRSALMVPGKFPQAQEYLEKRIKWLKEKFGVEASLMVLLGGQ
Ga0075019_108553671	3300006086	Watersheds	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRVAT
Ga0126372_109598841	3300010360	Tropical Forest Soil	MVPGKFPQAQEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVT
Ga0118733_1067088251	3300010430	Marine Sediment	MTVTFVRSGLMMTGKFPQASQYIEDRNKWLKEEFGVESTMMTLLGGQLGRIAMASENESVAQIE
Ga0182036_101640101	3300016270	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEE
Ga0182036_107185881	3300016270	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEVSLMALLGGQVGRVATVTEQD
Ga0182036_114386481	3300016270	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIAT
Ga0182041_103800332	3300016294	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKCLKEKFGVEASLMVLLGGQVGRIATVTEED
Ga0182041_108249621	3300016294	Soil	MAVTFVRSALMVPGKFPQAQEYLEKRIKWLKEKFGAEASLMVLLGGQVGRIATVTEEDSVAQIEKIRREIVGGALP
Ga0182041_110221932	3300016294	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVG
Ga0182041_111593711	3300016294	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMALLGGQVGRIATVTEQDSVAQIEKIRREIV
Ga0182041_114860081	3300016294	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEAS
Ga0182033_108803031	3300016319	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQ
Ga0182033_113166921	3300016319	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAV
Ga0182033_115359611	3300016319	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVG
Ga0182035_101010054	3300016341	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIA
Ga0182035_102633614	3300016341	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATV
Ga0182035_115654451	3300016341	Soil	MAVTFVRSALMVPSKFPQAHEYLEKRIKWLSEKFGVQTSLMALLGGQVGRIATVTEQDDVAQI
Ga0182035_116430732	3300016341	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGR
Ga0182032_104699933	3300016357	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVSRPRSQSRI
Ga0182032_106200791	3300016357	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQV
Ga0182032_110844921	3300016357	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGV
Ga0182034_104743922	3300016371	Soil	MAVTFVRSALMVPGKFPQAQEYLEKRIKWLKEKFGAEASLMVLLGGQVGRIATVTEEDSVAQIEKIRREIVGGAL
Ga0182034_108430631	3300016371	Soil	NDLGGVPMAVTFVRSALMVPGKFPKRMNTSKKRIKWLKAKFG
Ga0182034_113252591	3300016371	Soil	MAITFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQV
Ga0182037_100825625	3300016404	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEKIR
Ga0182037_105028223	3300016404	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLM
Ga0182039_102852681	3300016422	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTE
Ga0182039_103141311	3300016422	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVE
Ga0182039_112991331	3300016422	Soil	MTVTFVRSALMAPGKFPQAHEYVEKRIKWLKDKFGVEASLMTLLGGQIGRIATVTEHDSVAQIE
Ga0182039_120260911	3300016422	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEAS
Ga0182039_120835221	3300016422	Soil	MAVTFVRSALMVPGKFPQAQEYLEKRIKWLKEKFGVEAS
Ga0182038_101913404	3300016445	Soil	MSVTFVRSSLMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEKIRREIV
Ga0182038_103863503	3300016445	Soil	MAVTFVRSALMVPGKFPQANEYLEKRIKWLKEKFGVEASLMVLLGGQ
Ga0182038_107781702	3300016445	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRINWLKEKFGVEASLMALLGGQVGRIATVTEQDSVAQIEKIRRE
Ga0187825_102634921	3300017930	Freshwater Sediment	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGG
Ga0187804_104614102	3300018006	Freshwater Sediment	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFCVEASLMVLLGGQVGRVATVA
Ga0207862_11548592	3300027703	Tropical Forest Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFSVEA
Ga0209067_104874681	3300027898	Watersheds	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRVATVAEQDS
Ga0170824_1224074692	3300031231	Forest Soil	MAVTFVRSGLMMPGKFPQAHEYLEKRIKWLKEKFGVEASLMALLGGQVGRIATVTEEDSVAQIEKV
Ga0318516_100540441	3300031543	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVE
Ga0318541_100069181	3300031545	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFDVEASLMVLL
Ga0318541_102811931	3300031545	Soil	MSVTFVRSSLMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGPDR
Ga0318538_100030691	3300031546	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRVKWLKEKFGVEASLMVLLG
Ga0318538_103411361	3300031546	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVTE
Ga0318538_108311101	3300031546	Soil	MAVTFVRSALMVPGKFPQAHEYLERRIKWLKEKFGVEASLAVL
Ga0318528_102344582	3300031561	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQV
Ga0318515_101085544	3300031572	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDSVAQIEKIRRE
Ga0310915_100156211	3300031573	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVSRIATVTE
Ga0310915_104288301	3300031573	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVTEEDSVAEIEKIRREIVG
Ga0318555_100436694	3300031640	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEQD
Ga0318542_100363243	3300031668	Soil	LSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVE
Ga0318561_100414213	3300031679	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEKIRREIVGGALPKEL
Ga0306917_101753081	3300031719	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLL
Ga0306918_100158571	3300031744	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVG
Ga0306918_100965271	3300031744	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEKI
Ga0318492_1000409712	3300031748	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRVKWLKEKFGVEASLMVLLGGQVGRIATVTE
Ga0318494_107675831	3300031751	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVTEED
Ga0318509_100912671	3300031768	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVTEQDSVAQI
Ga0318521_110360492	3300031770	Soil	MSVTFVRSSLMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEK
Ga0318546_103699943	3300031771	Soil	MAVTFVRSALMVPGKFPQAHEYLERRIKWLKEKFGVEASLAVLL
Ga0318546_111302701	3300031771	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVAEQDSVAQIE
Ga0318508_12445071	3300031780	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGR
Ga0318547_106658742	3300031781	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRVKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEKIRREIVGGALPKELA
Ga0318547_106733052	3300031781	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFG
Ga0318552_100613291	3300031782	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDSVAQIEKIRREIVGGALPKELA
Ga0318503_101904501	3300031794	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEPSLMVLL
Ga0318557_100496534	3300031795	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDS
Ga0318523_106256321	3300031798	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQ
Ga0318568_109301391	3300031819	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIA
Ga0318567_106988542	3300031821	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVTEQDS
Ga0310917_101537923	3300031833	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSV
Ga0310917_102476511	3300031833	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDS
Ga0310917_105063882	3300031833	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVAEQDSVVEIEKIRREIV
Ga0318517_100033591	3300031835	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDSVAQIEKIRREIVGGALPKEL
Ga0318527_102395263	3300031859	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVT
Ga0306919_101507811	3300031879	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEKIRRE
Ga0306919_105515672	3300031879	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVSRIATVTEQDSIAQIEKIRR
Ga0318544_103416151	3300031880	Soil	MSVTFVRSALMVPGKFPKAHGYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEED
Ga0306925_104096241	3300031890	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMV
Ga0306925_106721511	3300031890	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVTEQ
Ga0318536_100203351	3300031893	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGV
Ga0318536_101393631	3300031893	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWFKEKFGVEASLMVLLGGQVGRIATVTEEDS
Ga0318522_100579353	3300031894	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDSVAQI
Ga0318520_100712721	3300031897	Soil	MSVTFVRSALMVPGKFPKAHGYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEE
Ga0306923_102222774	3300031910	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEED
Ga0306923_104612623	3300031910	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATV
Ga0306923_105722114	3300031910	Soil	MAVTFVRSALMVPGKFPQAHEYLERRIKWLKEKFGVEASLAVLLGGQVGRIATVTEQ
Ga0306921_106596954	3300031912	Soil	MSVTFVRSSLMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIEKIRR
Ga0306921_106636393	3300031912	Soil	MAVTFVRSALMVPGKFPQAHEYLERRIKWLKEKFGVEASLAVLLGGQVGRIATVTEQDSVAQ
Ga0306921_125192171	3300031912	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLM
Ga0310912_101194613	3300031941	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLAVLLGGQVGRIATVTEQDSVVQIEKIRREIVGGAL
Ga0310912_101220371	3300031941	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGPDR
Ga0310912_101708981	3300031941	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFG
Ga0310916_106940962	3300031942	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDNVAQIEKIRREIVGGALPKEL
Ga0310916_111655031	3300031942	Soil	MAVTFVRSALMVPGKFPQAQEYLEKRIKWLKEKFGAEASLMVLLGGQVG
Ga0310916_114220442	3300031942	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLG
Ga0310913_101296704	3300031945	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEASLM
Ga0310913_111092152	3300031945	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVSRIATVTEQDSIAQIEKIRRE
Ga0310909_104787173	3300031947	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVSRI
Ga0310909_113839972	3300031947	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRI
Ga0306926_100508497	3300031954	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVSRIATVTEQDSIAQIE
Ga0306926_102625571	3300031954	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDSVAQIE
Ga0306926_110101851	3300031954	Soil	MAVTFVRSALMVPGKFPQAQEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVSEEDSV
Ga0306926_116334162	3300031954	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGV
Ga0318531_101211521	3300031981	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDSV
Ga0306922_105420153	3300032001	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGR
Ga0306922_116542311	3300032001	Soil	MAITFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVE
Ga0310911_102884472	3300032035	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVLLGGQVGRIATVTEEDNVAQIEKIRRE
Ga0318559_100033061	3300032039	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDS
Ga0318558_106948641	3300032044	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATV
Ga0318518_100048041	3300032090	Soil	MSVTFVRSALMVPGKFPKAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRIATVTEEDSVAQIEKIRREIVSG
Ga0306920_1001693254	3300032261	Soil	MAVTFVRSALMVPGKFPKRMNTSKKRIKWLKAKFG
Ga0306920_1006307451	3300032261	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASL
Ga0306920_1007702884	3300032261	Soil	MAITFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMVL
Ga0306920_1009856803	3300032261	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEASLMALLGGQVGRIAT
Ga0306920_1020912261	3300032261	Soil	MAVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEA
Ga0306920_1022506561	3300032261	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWLKEKFGVEPSLMVLLGGQVGRI
Ga0318519_109321541	3300033290	Soil	MSVTFVRSALMVPGKFPQAHEYLEKRIKWFKEKFGVEASLMVLLGGQVGRIATVTVEDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072930

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences