Metagenome / Metatranscriptome Family F072890

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072890
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	67 residues
Representative Sequence	MDRGNDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGNFWPEEESIEDFLAALHEWRGHKRADPAA
Number of Associated Samples	85
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.34 %
% of genes near scaffold ends (potentially truncated)	28.93 %
% of genes from short scaffolds (< 2000 bps)	76.86 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.215 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (29.752 % of family members)
Environment Ontology (ENVO)	Unclassified (36.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.72% β-sheet: 0.00% Coil/Unstructured: 71.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01850	PIN	16.53
PF09364	XFP_N	5.79
PF11138	DUF2911	4.96
PF04909	Amidohydro_2	3.31
PF04255	DUF433	1.65
PF04542	Sigma70_r2	1.65
PF01636	APH	1.65
PF07973	tRNA_SAD	0.83
PF06114	Peptidase_M78	0.83
PF13444	Acetyltransf_5	0.83
PF16491	Peptidase_M48_N	0.83
PF07478	Dala_Dala_lig_C	0.83
PF12681	Glyoxalase_2	0.83
PF13380	CoA_binding_2	0.83
PF02082	Rrf2	0.83
PF05960	DUF885	0.83
PF03928	HbpS-like	0.83
PF14310	Fn3-like	0.83
PF13205	Big_5	0.83
PF01906	YbjQ_1	0.83
PF01844	HNH	0.83
PF01381	HTH_3	0.83
PF01458	SUFBD	0.83
PF06271	RDD	0.83
PF13581	HATPase_c_2	0.83
PF06429	Flg_bbr_C	0.83
PF02350	Epimerase_2	0.83
PF13518	HTH_28	0.83
PF01435	Peptidase_M48	0.83
PF00251	Glyco_hydro_32N	0.83
PF13620	CarboxypepD_reg	0.83
PF02470	MlaD	0.83
PF03702	AnmK	0.83
PF00108	Thiolase_N	0.83
PF01979	Amidohydro_1	0.83
PF00072	Response_reg	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.65
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.65
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.65
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.65
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.65
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.83
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.83
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	0.83
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	0.83
COG3507	Beta-xylosidase	Carbohydrate transport and metabolism [G]	0.83
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.83
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.83
COG2377	1,6-Anhydro-N-acetylmuramate kinase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.83
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.83
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.83
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.83
COG1749	Flagellar hook protein FlgE	Cell motility [N]	0.83
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.83
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.83
COG1621	Sucrose-6-phosphate hydrolase SacC, GH32 family	Carbohydrate transport and metabolism [G]	0.83
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	0.83
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.83
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	0.83
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.83
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.83
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.04 %
Unclassified	root	N/A	4.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.04 %
Unclassified	root	N/A	4.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.21 %
Unclassified	root	N/A	4.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.96 %
Unclassified	root	N/A	4.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	32.23 %
Unclassified	root	N/A	4.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.13 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.31 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.48 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.83 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	19.01 %
Unclassified	root	N/A	4.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.13 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.65 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.83 %
unclassified Candidatus Hydrogenedentes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	6.61 %
Unclassified	root	N/A	4.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.65 %
Candidatus Hydrogenedentes bacterium ADurb.Bin170	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin170	0.83 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	6.61 %
Unclassified	root	N/A	4.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.65 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	0.83 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.83 %
Candidatus Hydrogenedentes bacterium ADurb.Bin170	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin170	0.83 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6.61 %
Unclassified	root	N/A	4.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.65 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Candidatus Hydrogenedentes bacterium ADurb.Bin170	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin170	0.83 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.65 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.83 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Candidatus Hydrogenedentes bacterium ADurb.Bin170	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin170	0.83 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.83 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918024\|NODE_336783_length_3439_cov_6.936609	All Organisms → cellular organisms → Bacteria	3489	Open in IMG/M
3300000574\|JGI1357J11328_10108511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	851	Open in IMG/M
3300005534\|Ga0070735_10772547	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005541\|Ga0070733_10000635	All Organisms → cellular organisms → Bacteria	27969	Open in IMG/M
3300005921\|Ga0070766_10118011	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300006052\|Ga0075029_100402546	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin170	890	Open in IMG/M
3300006086\|Ga0075019_11105757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	514	Open in IMG/M
3300006795\|Ga0075520_1451379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	510	Open in IMG/M
3300006893\|Ga0073928_10014625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	8647	Open in IMG/M
3300006949\|Ga0075528_10154130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	616	Open in IMG/M
3300007072\|Ga0073932_1004465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16545	Open in IMG/M
3300009088\|Ga0099830_11833475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	507	Open in IMG/M
3300009137\|Ga0066709_101579256	Not Available	941	Open in IMG/M
3300009175\|Ga0073936_10365944	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300009521\|Ga0116222_1308642	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300009522\|Ga0116218_1325565	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300009547\|Ga0116136_1036259	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300009614\|Ga0116104_1053062	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300009644\|Ga0116121_1157203	Not Available	718	Open in IMG/M
3300010341\|Ga0074045_10832466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	583	Open in IMG/M
3300010379\|Ga0136449_100820261	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300010391\|Ga0136847_10223473	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010391\|Ga0136847_12627848	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012096\|Ga0137389_10829761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	794	Open in IMG/M
3300012351\|Ga0137386_10949281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	614	Open in IMG/M
3300014151\|Ga0181539_1055251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1840	Open in IMG/M
3300014152\|Ga0181533_1298929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	585	Open in IMG/M
3300014161\|Ga0181529_10389238	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300014167\|Ga0181528_10318335	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300014489\|Ga0182018_10000511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	50286	Open in IMG/M
3300014490\|Ga0182010_10599766	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300014491\|Ga0182014_10072584	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300014493\|Ga0182016_10580947	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300014494\|Ga0182017_10051905	All Organisms → cellular organisms → Bacteria → Acidobacteria	2733	Open in IMG/M
3300014494\|Ga0182017_10175048	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300014494\|Ga0182017_10210013	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300014494\|Ga0182017_10340198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	935	Open in IMG/M
3300014494\|Ga0182017_10411853	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300014494\|Ga0182017_10514662	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300014494\|Ga0182017_10563330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300014494\|Ga0182017_10633690	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300014494\|Ga0182017_10773791	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300014495\|Ga0182015_10857492	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300014496\|Ga0182011_10036604	All Organisms → cellular organisms → Bacteria	3515	Open in IMG/M
3300014496\|Ga0182011_10138208	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300014496\|Ga0182011_10141270	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300014496\|Ga0182011_10260330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1162	Open in IMG/M
3300014496\|Ga0182011_10260773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1160	Open in IMG/M
3300014496\|Ga0182011_10277325	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300014496\|Ga0182011_10360283	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300014496\|Ga0182011_10401654	Not Available	894	Open in IMG/M
3300014496\|Ga0182011_11002113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	518	Open in IMG/M
3300014501\|Ga0182024_10181057	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300014502\|Ga0182021_10100749	All Organisms → cellular organisms → Bacteria	3355	Open in IMG/M
3300014502\|Ga0182021_10155177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2666	Open in IMG/M
3300014502\|Ga0182021_10286945	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300014502\|Ga0182021_11345278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	860	Open in IMG/M
3300014502\|Ga0182021_11410225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	839	Open in IMG/M
3300014654\|Ga0181525_10322364	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	845	Open in IMG/M
3300014839\|Ga0182027_10003074	All Organisms → cellular organisms → Bacteria → Acidobacteria	26721	Open in IMG/M
3300014839\|Ga0182027_10208621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2260	Open in IMG/M
3300014839\|Ga0182027_10344478	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300014839\|Ga0182027_10917980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	904	Open in IMG/M
3300014839\|Ga0182027_11374162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300014839\|Ga0182027_11501349	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300014839\|Ga0182027_11695045	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300014839\|Ga0182027_11855114	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300014839\|Ga0182027_12063717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	544	Open in IMG/M
3300014839\|Ga0182027_12248105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300014839\|Ga0182027_12273032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	513	Open in IMG/M
3300017925\|Ga0187856_1013537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4509	Open in IMG/M
3300017941\|Ga0187850_10007688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7505	Open in IMG/M
3300018005\|Ga0187878_1131807	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300018020\|Ga0187861_10197156	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300018023\|Ga0187889_10378130	Not Available	615	Open in IMG/M
3300018025\|Ga0187885_10518776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	531	Open in IMG/M
3300018038\|Ga0187855_10166827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1309	Open in IMG/M
3300018046\|Ga0187851_10173232	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300018047\|Ga0187859_10298596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300019785\|Ga0182022_1218758	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300021861\|Ga0213853_10163451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1212	Open in IMG/M
3300021861\|Ga0213853_10913520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3396	Open in IMG/M
3300022524\|Ga0224534_1004382	All Organisms → cellular organisms → Bacteria	5592	Open in IMG/M
3300022557\|Ga0212123_10029570	All Organisms → cellular organisms → Bacteria	5695	Open in IMG/M
3300022650\|Ga0236339_1245669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300022881\|Ga0224545_1001741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4249	Open in IMG/M
3300024238\|Ga0224523_1088841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	722	Open in IMG/M
3300025829\|Ga0209484_10179246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	524	Open in IMG/M
3300027815\|Ga0209726_10005104	All Organisms → cellular organisms → Bacteria	16194	Open in IMG/M
3300027854\|Ga0209517_10185940	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300027867\|Ga0209167_10004491	All Organisms → cellular organisms → Bacteria	7058	Open in IMG/M
3300027905\|Ga0209415_10163569	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300028069\|Ga0255358_1048632	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300028735\|Ga0272446_1015704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5463	Open in IMG/M
3300028780\|Ga0302225_10465572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	591	Open in IMG/M
3300029990\|Ga0311336_11620177	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300030399\|Ga0311353_11222834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	619	Open in IMG/M
3300030760\|Ga0265762_1042103	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300031234\|Ga0302325_11491753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	872	Open in IMG/M
3300031344\|Ga0265316_10190819	All Organisms → cellular organisms → Bacteria → Acidobacteria	1522	Open in IMG/M
3300031344\|Ga0265316_10553347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300031712\|Ga0265342_10397177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	712	Open in IMG/M
3300031718\|Ga0307474_10358012	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300031746\|Ga0315293_10597158	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300032160\|Ga0311301_12078935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	659	Open in IMG/M
3300032770\|Ga0335085_10030256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7558	Open in IMG/M
3300032782\|Ga0335082_10732000	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300032897\|Ga0335071_11650513	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300033402\|Ga0326728_10000454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	159760	Open in IMG/M
3300033405\|Ga0326727_10197420	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300033413\|Ga0316603_10097980	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300033433\|Ga0326726_12002165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	564	Open in IMG/M
3300033486\|Ga0316624_11933617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	547	Open in IMG/M
3300033743\|Ga0334844_006111	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300033743\|Ga0334844_012733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1686	Open in IMG/M
3300033743\|Ga0334844_114739	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300033798\|Ga0334821_081706	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300033891\|Ga0334811_051558	Not Available	1105	Open in IMG/M
3300033891\|Ga0334811_083078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	829	Open in IMG/M
3300033983\|Ga0371488_0466225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	575	Open in IMG/M
3300034091\|Ga0326724_0512309	Not Available	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.52%
Host-Associated	Host-Associated	2.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.07%
Aquatic	Environmental → Aquatic	26.45%
Plants	Host-Associated → Plants	2.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.37%
Freshwater	Environmental → Aquatic → Freshwater	21.49%
Peat	Environmental → Terrestrial → Peat	15.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.48%
Sediment	Environmental → Aquatic → Sediment	1.65%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	38.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.05%
Lake	Environmental → Aquatic → Freshwater → Lake	4.13%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.83%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	33.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.65%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.83%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	29.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	8.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.13%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.48%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.48%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.65%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.65%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.65%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.83%
Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Microbial Mat	0.83%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022650	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W3	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028735	Hot spring microbial mat communities from Yellowstone National Park, WY, United States - YNP-CB-006-1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033743	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B_all_v_00864820	2140918024	Soil	DSFSARQPPPKKRLVQATGVLEVRRPKMDRGNDPRYNFGADPSQDEIIAQQGKGPTADLSVLHGGPWPEEESVEAFLAALHEWRGHRRAGPAA
JGI1357J11328_101085112	3300000574	Groundwater	MDTSNDPRYNFEANPSLDELIAQQGKGPIADVSVLHGEFWPEEESIEDFLEALYEWRGHKKADSAA*
Ga0070735_107725472	3300005534	Surface Soil	MHKSDDPRYNFDANPKLDDLIAQQGKGPIVDIRALHGNFWPDDEPIEDFLAALHEWRGHKKADPAA*
Ga0070733_100006353	3300005541	Surface Soil	MERADDPRYNFDADPSLDEIIAQQGKGPITDLSDLHGGFWPEEESIEDFLDALREWRGHKRQDPAA*
Ga0070766_101180112	3300005921	Soil	VGKTNDPRYNFDANPTLDALIAQQGKGPIAGVQALHGNFGPEDERIEDFLAALHAWRGHKKADPAA*
Ga0075029_1004025463	3300006052	Watersheds	MDQPNDPRFNFDANPTLEELIAQQGKSPVTDLSELHGHFWPDDEPIEDFLTALHEWRGHKREDPAA*
Ga0075019_111057572	3300006086	Watersheds	MDRSNDPRYNFYSSPSLDELIAQQGKGPLSDPTILLGDFWPEDEPVEEFLAALHE
Ga0075520_14513792	3300006795	Arctic Peat Soil	DPRYNFDADPSLDEIIAQQGKGPISDLSVLHGGFWPEEESIEEFLAALHEWRGHNKRVDPAA*
Ga0073928_100146253	3300006893	Iron-Sulfur Acid Spring	MDRSNDPRNFYANPSVEQIIAQQGKVPIADPTILLGDVWPEDEPVERFLAVLHEWRGHNRANRHA*
Ga0075528_101541302	3300006949	Arctic Peat Soil	MDKSNDPRYNFDADPSLDEIIAQQGRGPISDLSVLHGGFWPEEESIEEFLAALHEWRGHNKRVDPAA*
Ga0073932_10044652	3300007072	Hot Spring Sediment	LLYLELRRLNIDTAKDPRFHFDADPELEELISQQGRGPIEDLSVLQGGFWPEEESIEDFLAALHEWRGHRLADPAA*
Ga0099830_118334752	3300009088	Vadose Zone Soil	VLVTSNDPRYNFEANPTLDELIAQQGKGQIVDVSLLHGDFWPEDERIEDFLTALYEWRGHKSSSKSDPAA*
Ga0066709_1015792561	3300009137	Grasslands Soil	MVRLIYSKYRRWSTDERLNDPRYNFGANPTLDELIAQQGKGTITDLRVLDAAFWPDNEPIEDFLAALHDWRGHKKTDPTA*
Ga0073936_103659442	3300009175	Freshwater Lake Hypolimnion	MDTTNDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGEFWPEEESIEDFLAALHEWRGHKRVDPAA*
Ga0116222_13086422	3300009521	Peatlands Soil	LRSSDPQHAFEANPTLDEIIEQQGKGPITDVAVLHGNFWPEDEPIEDFLAALHEWRGHTKADPAA*
Ga0116218_13255651	3300009522	Peatlands Soil	AFEANPTLDEIIEQQGKGPITDVAVLHGNFWPEDEPIEDFLAALHEWRGHTKADPAA*
Ga0116136_10362592	3300009547	Peatland	MNESWNDPRHNFDANPTLDELIAQQGKGPVTDVRVLHGNFWPEEERIEDFLAALHEWRGHKRADPAA*
Ga0116104_10530621	3300009614	Peatland	NFDANPTVDELIAQQGKGPISDPRTLLGDLWPDNEPIEEFLAALREWRGHNRSDRAA*
Ga0116121_11572031	3300009644	Peatland	MNESWSDPRHNFDANPTLDELIAQQGKGPVTDVRVLHGDFWPEEERIEDFLAALHE*
Ga0074045_108324662	3300010341	Bog Forest Soil	MDRASDPRYNFDADPSLDEIIAQQGKGPIADLSVLHGDPWPEEEPIEEFLAALHEWRGHKRTGPAA*
Ga0136449_1008202612	3300010379	Peatlands Soil	VDKVNDPRYNFDANPTLAELIVQQRKGPLAGMPAPHGNFWPEDEPIEDFLAALHEWRGHKKADPAA*
Ga0136847_102234731	3300010391	Freshwater Sediment	ANPTVDELIAQQGKGPIKDPKVLLGDVWPEDEPVEKFLAALDEWRGHNKSDRAA*
Ga0136847_126278482	3300010391	Freshwater Sediment	MDKSNDPRYNFYASPTVGELIAQQGKGPISDPAILLGDFWPEDGPIQEFLAALHEWRGHNRSDRAA*
Ga0137389_108297612	3300012096	Vadose Zone Soil	VLVTSNDPRYNFEANPTLDELIAQQGKGQIVDVSLLHGDFWPEDELIEDFLTALYEWRGHKSSSKSDPAA*
Ga0137386_109492811	3300012351	Vadose Zone Soil	MDPNDPRSNDPRYNFYANPTLDEIIAQQGKGPVDISVLRQNAWPDDEPIEDFLAALREWRGHGRTDPAA*
Ga0181539_10552512	3300014151	Bog	MNESWNDPRHNFDANPTLDELIAQQGKGPVTDVRVLHGNFWPEEERIEDFLAALHEWRGHKRADPA*
Ga0181533_12989291	3300014152	Bog	MNESWNDPRHNFDANPTLDELIAQQGKGPLTDVRVLHGNFWPEEERIEDFLAALHEWRGHKRADPA*
Ga0181529_103892382	3300014161	Bog	MNKSADNPRHNFDADPTLEELIAQQGKGPVTDVRVLHGYFWPEEERIEDFLAALHEWRGHKTVHPAA*
Ga0181528_103183352	3300014167	Bog	MDQPNDPRFNFDANPTLDELIAQQGKSPVTDLTELHGHFWPDDEPIEDFLSALHDWRGHEREDPAA*
Ga0182018_1000051116	3300014489	Palsa	MDNADDPRYNFDADLSLDEIIAQQGKGPITDLSVLHGEFWPPEESVEDFLAALHEWRGHKRAEPAA*
Ga0182010_105997662	3300014490	Fen	MDRSNDPRCNFDANPTVDELIAQQGKGPIGDPRALLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182014_100725841	3300014491	Bog	MLKGQRRQMDKSNDPRYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALDEWRGHDRSD*
Ga0182016_105809471	3300014493	Bog	MDKHNDPRYDFYANPTVDELITQQGKGPVSDPRTLLGDFWPEDEPIEDFLLALHEWRGHNQRDLA
Ga0182017_100519054	3300014494	Fen	MDRANDPRYNFDADPSLDEIIAQQGKGPIADLSVLHGDLWPGEESIEDFLEALHEWRGHKRAGPAA*
Ga0182017_101750481	3300014494	Fen	NPTVDELIAQQGKDPISDPSTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182017_102100131	3300014494	Fen	RYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSE*
Ga0182017_103401981	3300014494	Fen	MDKANDPRYNFDANPTVDELIAQQGKGPVGDPRTLLGDVWPGDEPIEEFLAALHEWRGHNRSDRA
Ga0182017_104118532	3300014494	Fen	MDGANDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGDSWQEEESIEDFLAALREWRGHRRAGPAA*
Ga0182017_105146621	3300014494	Fen	RYNFDANPTVDELIAQQGKGPVSDPSTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182017_105633301	3300014494	Fen	MLKMQRRQMDGSNDPRYNFDANPTVDELVAQQGKGPVVDPSTLLGDLWPDDEPIEEFLAALHEWRGRNRSD*
Ga0182017_106336901	3300014494	Fen	RYNFDADPSLDEIIAQQGKGPIADLSVLHSDPWPEEEPIEGFLAALHEWRGHKRTGPAA*
Ga0182017_107737912	3300014494	Fen	MDRSNDPRYNFDANPTVDELIAQQGKGPVSDPSILLGDLWPDDEPIEEFLAALHEWRGHNKSDRA
Ga0182015_108574921	3300014495	Palsa	VDKTNDPRYNFDANPTLEELIAEQGKGPVTDVQALHGNFWPEEERIEDFLAALHEWRGHKKADPAA*
Ga0182011_100366043	3300014496	Fen	MQRPKMDRANDPRYNFDADPSLDEIIAQQGKGPIADLSVLHSDPWPEEEPIEGFLAALHEWRGHKRTGPAA*
Ga0182011_101382083	3300014496	Fen	MDRSNDPRYNFDANPTVDELIAQQGKGPVSDPSILLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182011_101412702	3300014496	Fen	MDRSNDPRYSFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182011_102603302	3300014496	Fen	MDRSNDPRYNFDANPTVDELIAQQGKGPVGDPWTLLGDLWPDDEPIEEFLAALHEWRGHNRSE*
Ga0182011_102607733	3300014496	Fen	MDTSNDPRYNFDANPTVDELIAQQGKGPVSDPSTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182011_102773252	3300014496	Fen	VKPGILEGRRPKMDRANDPRYNFDADPSLDEIIAQQGKRPITDLSVLHGGFWPEEESIEDFLLALHEWRGHKRADPAVTT*
Ga0182011_103602832	3300014496	Fen	LAINPAGILELRRPTMDRANDPRYNFDADPSLDEIVAQQGKGPISDLSVLHGGFWREEVSSEDFLSALHEWRGHKRADPAA*
Ga0182011_104016542	3300014496	Fen	MDRGNDPRYNFGADPSLDEIIAQQGKGPTADLSVLHGGAWPEEESVEAFLAALHEWRGHRRAGPAA*
Ga0182011_110021131	3300014496	Fen	MDKSNDPRYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRA
Ga0182024_101810572	3300014501	Permafrost	MERANDPRYNFDADPSLDEIIAQQGKGPITDLSDLHGNFWPEEESIEDFLDALHEWRGHKQQDPAA*
Ga0182021_101007494	3300014502	Fen	LAINPAGILELRRPTMDRANDPRYNFDADPSLDEIVAQQGKGPISDLSVLHGGFWPEEESIEDFLSALHEWRGHKRADPAA*
Ga0182021_101551774	3300014502	Fen	MDRVNDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGGFWPEEESIEDFLLALHEWRGHKRADPAVTT*
Ga0182021_102869452	3300014502	Fen	MDRANDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGDLLPEEESIEDFLAALHEWRGHRRAGPAA*
Ga0182021_113452782	3300014502	Fen	MDRSNDPRYNFDANPTVDELIAQQGKGPVGDPSTLLGDLWPDDEPIEEFLAALHEWRGHNRSD*
Ga0182021_114102253	3300014502	Fen	MDRSNDPRYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSD
Ga0181525_103223642	3300014654	Bog	VDKRNDPLQDFEANPTLDELISQQGKGPITDLLALHGNFWPEDERIEDFQAALHEWRGHKKADPAA*
Ga0182027_100030743	3300014839	Fen	MRRPKMDRANDPRYNFDADPFLDEIIAQQGTGPIADLSVLHGDPWPEEEPIEEFLAALHEWRGHKRTGPAA*
Ga0182027_102086212	3300014839	Fen	MDRPNDPRYSFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182027_103444782	3300014839	Fen	MDRSNDPRYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA*
Ga0182027_109179802	3300014839	Fen	MDRSNDPRYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGRNRSDRAA*
Ga0182027_113741621	3300014839	Fen	MDKSNDPRYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSE*
Ga0182027_115013491	3300014839	Fen	PAIDRTGTLDMQRPKMDRANDPRYNFDADPSLDEIIAQQGKGPIADLSVLHSDPWPEEEPIEGFLAALHEWRGHKRTGPAA*
Ga0182027_116950452	3300014839	Fen	MDLSNDPRYNFYASPTVDELIAQQVKGPIHDPKVLLGDFWPEDEPIEEFLAALDEWRGHNRSDRAA*
Ga0182027_118551142	3300014839	Fen	EVRRPKMDRGNDPRYNFGADPSLDEIIAQQGKGPTADLSVLHGGAWPEEESVEAFLAALHEWRGHRRAGPAA*
Ga0182027_120637172	3300014839	Fen	CWRPKMDRANDPRYNFDADPSLDEIIAQQGKGPIADLSVLHGDLWPEEEPIEDFLAALHEWRGHKRAGPAA*
Ga0182027_122481052	3300014839	Fen	VDRANDPRYNFDADPSLDEIIAQQGKGPITDPSVLHGDSWPEEESIEVFLAALHEWRGH
Ga0182027_122730322	3300014839	Fen	MDKANDPRYNFDANPTVDELIAQQGKGPVGDPRTLLGDVWPGDEPIEEFLAALHEWRGHNRSDRAA*
Ga0187856_10135376	3300017925	Peatland	MNESWNDPRHNFDANPTLDELIAQQGKGPVTDVRVLHGNFWPEEERIEDFLAALHEWRGHKRADPAA
Ga0187850_100076883	3300017941	Peatland	VRRQQTDKSKDPRYNFDANPTVDELIAQQGKGPISDPRTLLGDLWPDNEPIEEFLAALREWRGHNRSDRAA
Ga0187878_11318072	3300018005	Peatland	LDRTGILKVRRQQTDKSKDPRYNFDANPTVDELIAQQGKGPISDPRTLLGDLWPDNEPIEEFLAALREWRGHNRSDRAA
Ga0187861_101971562	3300018020	Peatland	LDRTGILKVRRQQTDKSKDPRYNFDANPAVDELIAQQGKGPISDPRTLLGDLWPDNEPIEEFLAALREWRGHNRSDRAA
Ga0187889_103781302	3300018023	Peatland	MNESWNDPRHNFDANPTLDELIAQQGKGPVTDVRVLHGNFWPEEERIEDFLAALHEWRGHKR
Ga0187885_105187762	3300018025	Peatland	MNESWNDPRHNFDANPTLDELIAQQGKGPVTDVRVLHGNFWPEEERIEDFLAALHEWRGHKRADPA
Ga0187855_101668272	3300018038	Peatland	VDKPNGPRYNFDANPTLDEFIAQQGKGPTTGNFWPEDEPIEDFLAALHEWRGHKKADPAA
Ga0187851_101732321	3300018046	Peatland	MNKSADNPRHNFDADPTLEELIAQQGKGPVTDVRVLHGNFWPEEERIEDFLAALHEWRGHKTVHPAA
Ga0187859_102985962	3300018047	Peatland	DANPTLDEFIAQQGKGPTTGNFWPEDEPIEDFLAALHEWRGHKKADPAA
Ga0182022_12187584	3300019785	Fen	MDTSNDPRYNFDANPTVDELIAQQGKGPVSDPSTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA
Ga0213853_101634511	3300021861	Watersheds	KEDAQDPRYNFEASPSLEDLIAQQGKQPVTDLGRLRGNFWPGDESIEDFLAALPEWRGHNRAHPAA
Ga0213853_109135204	3300021861	Watersheds	MAKAFGFTQDELKLFYASPTVDELIAQQGKGPIPDPSILLGDFWPENEPIEEFLTALHEWRGHNRSGRAA
Ga0224534_10043824	3300022524	Soil	MLKGQRRQMDKSNDPRYNFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALDEWRGHDRSD
Ga0212123_100295704	3300022557	Iron-Sulfur Acid Spring	MDRSNDPRNFYANPSVEQIIAQQGKVPIADPTILLGDVWPEDEPVERFLAVLHEWRGHNRANRHA
Ga0236339_12456691	3300022650	Freshwater	FRTGRSVILKMQRRQMDRSNDPRYNFDANPPVDELIAPQGKGPIGDPRTLLGDLWPDDEPVEEFLAALHE
Ga0224545_10017416	3300022881	Soil	MDNADDPRYNFDADLSLDEIIAQQGKGPITDLSVLHGEFWPPEESVEDFLAALHEWRGHKRAEPAA
Ga0224523_10888411	3300024238	Soil	VILKTQRRQMDTSNDPRYNFDANPTVDELIAQQGKGPVSDPSTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA
Ga0209484_101792462	3300025829	Arctic Peat Soil	MDKSNDPRYNFDADPSLDEIIAQQGRGPISDLSVLHGGFWPEEESIEEFLAALHEWRGHNKRVDPAA
Ga0209726_1000510416	3300027815	Groundwater	MDTSNDPRYNFEANPSLDELIAQQGKGPIADVSVLHGEFWPEEESIEDFLEALYEWRGHKKADSAA
Ga0209517_101859403	3300027854	Peatlands Soil	LRSSDPQHAFEANPTLDEIIEQQGKGPITDVAVLHGNFWPEDEPIEDFLAALHEWRGHTKADPAA
Ga0209167_100044919	3300027867	Surface Soil	MERADDPRYNFDADPSLDEIIAQQGKGPITDLSDLHGGFWPEEESIEDFLDALREWRGHKRQDPAA
Ga0209415_101635692	3300027905	Peatlands Soil	MESTNDPRYNFDADPSLDEIIAQQGQGPITDLSDLHGSFWQEEESIEDFLDALHEQRGHKRQVSAS
Ga0255358_10486322	3300028069	Soil	QMDRSNDPRYNFDANPTVDELIAQQGKGPVGDPWTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA
Ga0272446_10157047	3300028735	Microbial Mat	MDTSNDRRYNFYASPTVDELIAQQGKGPISDPTVLLGDFWLEDEPVEDFLAALLEWRGHNRSDRAA
Ga0302225_104655721	3300028780	Palsa	VDKPNGPRYNFDANPTLDEFIAQQGKGPTTGNFWPEDEPIEDFLAALHEWRGHK
Ga0311336_116201771	3300029990	Fen	NFDADPSLDEIIAQQGKGPITDPSVLHGDSWPEEESIEVFLAALHEWRGHKRAGPAA
Ga0311353_112228343	3300030399	Palsa	GPRYNFDANPTLDEFIAQQGKGPTTGNFWPEDEPIEDFLAALHEWRGHKKADPAA
Ga0265762_10421031	3300030760	Soil	MEVNVDKLKDPRYNFDANPTLDELIAQQGKGPVTDVRVLYGNFWPQDEPTEDFLAALHEWRGHKKADPAA
Ga0302325_114917531	3300031234	Palsa	VLVDPKSNDPRDNFYANPAMDELIAQQGKGPIADVRVLHGNFWPEDEPIEHFLEALHEWRGHRRFTKFDPAA
Ga0265316_101908192	3300031344	Rhizosphere	MDRANDPRYNFDADPSLDEIIAEQGKGPITDLSVLHGGFWPEEEPIEDFLTALHEWRGHKRADPAA
Ga0265316_105533472	3300031344	Rhizosphere	MLKMQRRQMDGSNDPRYNFDANPTVDELVAQQGKGPVVDPSTLLGDLWPDDEPIEEFLAALHEWRGRNRSD
Ga0265342_103971771	3300031712	Rhizosphere	NSGTAGAGRVGAGILEMRRPKMDRANDPRYNFDADPFLDEIIAQQGTGPIADLSVLHGDPWPEEESIEEFLAALHEWRGHKRTGPAA
Ga0307474_103580122	3300031718	Hardwood Forest Soil	MDGINDPRYNFDADPSLDEIIAQQGKGPIADLSVLHGNFWPDEESIEDFLAALDEWRGHKRAGPAA
Ga0315293_105971582	3300031746	Sediment	MGTSDDPRYNFDANPSLDELIAQQGKGPITDVSVLHGNFWPEEESIEDFLAALHEWRGHRRADSAA
Ga0311301_120789352	3300032160	Peatlands Soil	VDKVNDPRYNFDANPTLAELIVQQRKGPLAGMPAPHGNFWPEDEPIEDFLAALHEWRGHKKADPAA
Ga0335085_100302569	3300032770	Soil	MSDSNDPLQNFNADPTLEELIAQQRKSPVRDISSLRGNFWPQEESVEDFLEALHEWRGHKQADPAA
Ga0335082_107320002	3300032782	Soil	MDRSNDPRYKFYASPSVDDLIAHQGKGPLSDPTILLGDFWPEEEPVEEFPTALHEWRGHNRADRAA
Ga0335071_116505131	3300032897	Soil	ILGLRRCRMSDSNDPLQNFNADPTLEELIAQQRKSPVRDISSLRGNFWPQEESVEDFLEALHEWRGHKQADPAA
Ga0326728_1000045489	3300033402	Peat Soil	MDKANDPRYNFDADPSLDEIIAQQGKGPIADLSSLHGGPWPEEESIEDFLAALHEWRGHKRTGPAA
Ga0326727_101974202	3300033405	Peat Soil	MQMWQVDRSNDPRYNFDANPSVGELIAQQGKGPVSDPSTLLGDLWPDDEPIEEFLAALHGWRGHNRSE
Ga0316603_100979804	3300033413	Soil	MDRGNDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGNFWPEEESIEDFLAALHEWRGHKRADPAA
Ga0326726_120021651	3300033433	Peat Soil	MDRACDPRYNFDADTSLDAVIARRGKGPITDLPVLNGNFWPEEKPVEEFLAALHEWRGH
Ga0316624_119336172	3300033486	Soil	MDRGDDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGNFWPEEESIEDFLAALHEWRGHKRADPAA
Ga0334844_006111_1551_1742	3300033743	Soil	MDRSNDPRYNFDANPTVDELIAQQGKGPVGDPWTLLGDLWPDDEPIEEFLAALHEWRGHNRSE
Ga0334844_012733_1_183	3300033743	Soil	MDRGNDPRYNFGADPSLDEIIAQQGKGPTADLSVLHGGAWPEEESVEAFLAALHEWRGHR
Ga0334844_114739_23_223	3300033743	Soil	MDRSNDPRYNFDANPTVDELIAQQGKGPVSDPSILLGDLWPDDEPIEEFLAALHEWRGHNKSDRAA
Ga0334821_081706_394_594	3300033798	Soil	MDRANDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGDLLPEEESIEDFLAALHEWRGHRRAGPAA
Ga0334811_051558_3_170	3300033891	Soil	MDRSNDPRYNFDANPTVDELIAQQGKGPVSDPSILLGDLWPDDEPIEEFLAALHEW
Ga0334811_083078_141_341	3300033891	Soil	MDRSNDPRYSFDANPTVDELIAQQGKGPIGDPRTLLGDLWPDDEPIEEFLAALHEWRGHNRSDRAA
Ga0371488_0466225_121_366	3300033983	Peat Soil	LAIDPAGILEVRRPKMDRANDPRYNFDADPSLDEIIAQQGKGPITDLSVLHGGFWPEEESIEDFLAALHEWRGHKRADPAA
Ga0326724_0512309_3_188	3300034091	Peat Soil	MQMWQVDRSNDPRYNFDANPSVGELIAQQGKGPVSDPSTLLGDLWPDDEPIEEFLAALHGWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072890

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences