Metagenome Family F072884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072884
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	102 residues
Representative Sequence	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASTEPEANMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Number of Associated Samples	98
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.98 %
% of genes near scaffold ends (potentially truncated)	37.19 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (21.488 % of family members)
Environment Ontology (ENVO)	Unclassified (24.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (30.579 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.31% β-sheet: 22.31% Coil/Unstructured: 45.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF11799	IMS_C	15.70
PF00291	PALP	12.40
PF03401	TctC	7.44
PF01594	AI-2E_transport	5.79
PF00719	Pyrophosphatase	4.96
PF03486	HI0933_like	4.13
PF01425	Amidase	3.31
PF00082	Peptidase_S8	1.65
PF07927	HicA_toxin	1.65
PF00009	GTP_EFTU	1.65
PF05433	Rick_17kDa_Anti	1.65
PF00890	FAD_binding_2	1.65
PF04389	Peptidase_M28	1.65
PF00817	IMS	0.83
PF13490	zf-HC2	0.83
PF03358	FMN_red	0.83
PF01047	MarR	0.83
PF07883	Cupin_2	0.83
PF01135	PCMT	0.83
PF02798	GST_N	0.83
PF00535	Glycos_transf_2	0.83
PF01163	RIO1	0.83
PF01569	PAP2	0.83
PF00030	Crystall	0.83
PF04055	Radical_SAM	0.83
PF00472	RF-1	0.83
PF00398	RrnaAD	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	8.26
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	8.26
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	7.44
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	5.79
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	4.96
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	4.13
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	4.13
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	4.13
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	4.13
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	4.13
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	4.13
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	4.13
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	4.13
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	4.13
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	4.13
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	3.31
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.65
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.83
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.83
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.83
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.83
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.83
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.83
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.21 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	86.78 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	59.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13.22 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2.48 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	59.50 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.48 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2.48 %
Unclassified	root	N/A	1.65 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.83 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	59.50 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2.48 %
Unclassified	root	N/A	1.65 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.83 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01C4P4G	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300004058\|Ga0055498_10124519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	543	Open in IMG/M
3300004780\|Ga0062378_10106896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	698	Open in IMG/M
3300004781\|Ga0062379_10013135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1318	Open in IMG/M
3300005328\|Ga0070676_10181357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1369	Open in IMG/M
3300005328\|Ga0070676_10695505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	742	Open in IMG/M
3300005330\|Ga0070690_100366067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1050	Open in IMG/M
3300005336\|Ga0070680_100750344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	840	Open in IMG/M
3300005340\|Ga0070689_100691111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	890	Open in IMG/M
3300005456\|Ga0070678_100259183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1461	Open in IMG/M
3300005467\|Ga0070706_100006973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10656	Open in IMG/M
3300005491\|Ga0074212_123257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	887	Open in IMG/M
3300005538\|Ga0070731_10391545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	923	Open in IMG/M
3300005618\|Ga0068864_100027849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4776	Open in IMG/M
3300005836\|Ga0074470_10718989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	805	Open in IMG/M
3300005841\|Ga0068863_100133657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2369	Open in IMG/M
3300005842\|Ga0068858_102297152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	533	Open in IMG/M
3300005994\|Ga0066789_10423195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	556	Open in IMG/M
3300009111\|Ga0115026_11507734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	560	Open in IMG/M
3300009177\|Ga0105248_10015929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8280	Open in IMG/M
3300010396\|Ga0134126_13064182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	504	Open in IMG/M
3300010397\|Ga0134124_10039458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3945	Open in IMG/M
3300010400\|Ga0134122_11449780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	703	Open in IMG/M
3300012045\|Ga0136623_10093473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300012045\|Ga0136623_10135907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1068	Open in IMG/M
3300012091\|Ga0136625_1087903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1093	Open in IMG/M
3300012092\|Ga0136621_1010760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3758	Open in IMG/M
3300012094\|Ga0136638_10078961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1404	Open in IMG/M
3300012185\|Ga0136619_10075882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1289	Open in IMG/M
3300012204\|Ga0137374_10051301	All Organisms → cellular organisms → Bacteria → Proteobacteria	4244	Open in IMG/M
3300012207\|Ga0137381_11034629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	708	Open in IMG/M
3300012349\|Ga0137387_10346635	All Organisms → cellular organisms → Bacteria → Proteobacteria	1075	Open in IMG/M
3300012359\|Ga0137385_10893754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	735	Open in IMG/M
3300012530\|Ga0136635_10106552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	896	Open in IMG/M
3300012680\|Ga0136612_10409841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	687	Open in IMG/M
3300012684\|Ga0136614_10004686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	8991	Open in IMG/M
3300012684\|Ga0136614_10157954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1717	Open in IMG/M
3300012684\|Ga0136614_10261233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1292	Open in IMG/M
3300012922\|Ga0137394_10299192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1375	Open in IMG/M
3300013297\|Ga0157378_12494326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	569	Open in IMG/M
3300014325\|Ga0163163_10098632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2943	Open in IMG/M
3300015371\|Ga0132258_10087741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7281	Open in IMG/M
3300015371\|Ga0132258_10347165	All Organisms → cellular organisms → Bacteria	3668	Open in IMG/M
3300015374\|Ga0132255_103568264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	662	Open in IMG/M
3300017695\|Ga0180121_10086650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300017695\|Ga0180121_10419974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	521	Open in IMG/M
3300017787\|Ga0183260_10197373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1412	Open in IMG/M
3300017787\|Ga0183260_10364319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	968	Open in IMG/M
3300017789\|Ga0136617_10004196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12890	Open in IMG/M
3300017789\|Ga0136617_10008824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8982	Open in IMG/M
3300017789\|Ga0136617_10204292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1663	Open in IMG/M
3300018000\|Ga0184604_10062544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1063	Open in IMG/M
3300018028\|Ga0184608_10231792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	811	Open in IMG/M
3300018051\|Ga0184620_10180599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	694	Open in IMG/M
3300018052\|Ga0184638_1000912	All Organisms → cellular organisms → Bacteria → Proteobacteria	8693	Open in IMG/M
3300018053\|Ga0184626_10101757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1217	Open in IMG/M
3300018054\|Ga0184621_10192675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	731	Open in IMG/M
3300018056\|Ga0184623_10278297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	760	Open in IMG/M
3300018071\|Ga0184618_10300858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	683	Open in IMG/M
3300018072\|Ga0184635_10416329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300018476\|Ga0190274_10105299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2257	Open in IMG/M
3300018476\|Ga0190274_10386423	Not Available	1350	Open in IMG/M
3300020003\|Ga0193739_1124842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	636	Open in IMG/M
3300021080\|Ga0210382_10222980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	822	Open in IMG/M
3300021432\|Ga0210384_10607092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	983	Open in IMG/M
3300022534\|Ga0224452_1159165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	695	Open in IMG/M
3300022694\|Ga0222623_10402824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	520	Open in IMG/M
3300022756\|Ga0222622_10357164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	1020	Open in IMG/M
3300025906\|Ga0207699_10275803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1167	Open in IMG/M
3300025910\|Ga0207684_10338867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1295	Open in IMG/M
3300025925\|Ga0207650_11508745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571	Open in IMG/M
3300025931\|Ga0207644_10176157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1673	Open in IMG/M
3300025986\|Ga0207658_11966973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	532	Open in IMG/M
3300026035\|Ga0207703_10531666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1107	Open in IMG/M
3300026089\|Ga0207648_11941417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	550	Open in IMG/M
3300026121\|Ga0207683_10226922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1703	Open in IMG/M
3300027869\|Ga0209579_10533028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	637	Open in IMG/M
3300027885\|Ga0209450_10350705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1072	Open in IMG/M
3300027902\|Ga0209048_10086988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2433	Open in IMG/M
3300027902\|Ga0209048_10416212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	920	Open in IMG/M
3300028380\|Ga0268265_12472301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	525	Open in IMG/M
3300028381\|Ga0268264_12481478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	524	Open in IMG/M
3300028802\|Ga0307503_10316587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	788	Open in IMG/M
3300028804\|Ga0268298_10237710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	972	Open in IMG/M
3300031720\|Ga0307469_11210825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	714	Open in IMG/M
3300031740\|Ga0307468_101346473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	653	Open in IMG/M
3300031772\|Ga0315288_10387654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1421	Open in IMG/M
3300031834\|Ga0315290_10091610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2549	Open in IMG/M
3300031834\|Ga0315290_10316642	All Organisms → cellular organisms → Bacteria → Proteobacteria	1367	Open in IMG/M
3300031834\|Ga0315290_10831099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	788	Open in IMG/M
3300031862\|Ga0315280_10508185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	522	Open in IMG/M
3300031873\|Ga0315297_10290195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300031873\|Ga0315297_10715572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	838	Open in IMG/M
3300031873\|Ga0315297_11273681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	600	Open in IMG/M
3300031997\|Ga0315278_10002090	All Organisms → cellular organisms → Bacteria → Proteobacteria	17705	Open in IMG/M
3300031997\|Ga0315278_10176655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2191	Open in IMG/M
3300031997\|Ga0315278_10467408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1299	Open in IMG/M
3300031999\|Ga0315274_10133676	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300032018\|Ga0315272_10724139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300032053\|Ga0315284_11477213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	723	Open in IMG/M
3300032092\|Ga0315905_10640119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	954	Open in IMG/M
3300032118\|Ga0315277_10500918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1218	Open in IMG/M
3300032143\|Ga0315292_10531128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	991	Open in IMG/M
3300032164\|Ga0315283_11785312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	619	Open in IMG/M
3300032177\|Ga0315276_11253115	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300032256\|Ga0315271_10071065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2575	Open in IMG/M
3300032256\|Ga0315271_10115984	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300032256\|Ga0315271_10488496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1043	Open in IMG/M
3300032256\|Ga0315271_11778175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	529	Open in IMG/M
3300032275\|Ga0315270_10226123	Not Available	1155	Open in IMG/M
3300032342\|Ga0315286_10809799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	947	Open in IMG/M
3300032342\|Ga0315286_10933611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	868	Open in IMG/M
3300032516\|Ga0315273_10474551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1678	Open in IMG/M
3300033416\|Ga0316622_101281682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	857	Open in IMG/M
3300034115\|Ga0364945_0269412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	527	Open in IMG/M
3300034149\|Ga0364929_0243023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	604	Open in IMG/M
3300034150\|Ga0364933_035202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1227	Open in IMG/M
3300034178\|Ga0364934_0052460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1509	Open in IMG/M
3300034354\|Ga0364943_0065256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1225	Open in IMG/M
3300034354\|Ga0364943_0069763	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300034354\|Ga0364943_0243614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.82%
Host-Associated	Host-Associated	16.53%
Engineered	Engineered	1.65%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	55.37%
Terrestrial	Environmental → Terrestrial	26.45%
Plants	Host-Associated → Plants	16.53%
Solid Waste	Engineered → Solid Waste	0.83%
Wastewater	Engineered → Wastewater	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.80%
Soil	Environmental → Terrestrial → Soil	20.66%
Sediment	Environmental → Aquatic → Sediment	10.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.92%
Floodplain	Environmental → Terrestrial → Floodplain	5.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.79%
Marine	Environmental → Aquatic → Marine	0.83%
Roots	Host-Associated → Plants → Roots	0.83%
Grass	Engineered → Solid Waste → Grass	0.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.83%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	21.49%
Ice	Environmental → Aquatic → Freshwater → Ice	14.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	5.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.79%
Loam	Environmental → Terrestrial → Soil → Loam	4.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.13%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	21.49%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	14.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.13%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	21.49%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	14.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.44%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	5.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.31%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.48%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005491	Sediment ecosystem from Lake Washington, Seattle, Washington, USA - Formaldehyde enrichment	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028804	Activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP Weurt	Engineered	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_05212320	2170459017	Switchgrass, Maize And Mischanthus Litter	NAVSALSKNDYVLIGLRRSHQRDRLCFRRAEANMTAQFGRIRGEKFFLVAFQAAWFLVGNMAKPVSDWMERHKPSPFD
Ga0055498_101245191	3300004058	Natural And Restored Wetlands	MFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASAEPEEIMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHRPSPFK*
Ga0062378_101068962	3300004780	Wetland Sediment	VRLYVVQMFYSTLKESGPLVAEAKNTVSTLSKNDFVLMGFGEHTSAIAFVSNEPEANMTAQFGRIRGEKFSLVAFEVAWFLGGNMSKPVSDWLERHKPSPFK
Ga0062379_100131352	3300004781	Wetland Sediment	VRLYVVQMFYSSLKESGHLVAEAKNTVSTLSKNDFVLMGFGEHTSAIAFVSNEPEANMTAQFGRIRGEKFSLVAFEVAWFLGGNMSKPVSDWLERHKPSPFKGG*
Ga0070676_101813572	3300005328	Miscanthus Rhizosphere	MAGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGEHFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0070676_106955051	3300005328	Miscanthus Rhizosphere	YSSLKECAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFSSDEPEANMRTQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK*
Ga0070690_1003660672	3300005330	Switchgrass Rhizosphere	MAGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0070680_1007503442	3300005336	Corn Rhizosphere	MRLYIVQMFYPSLKESGALVAEAKNTVAALSKNDFILMGFGDQTSAIAFSSAEPEANMEAQFGRIRGEKFSLIAFEAAWLLGGNLPKHVSDWMDRHKPSVFGEASAKQD*
Ga0070689_1006911111	3300005340	Switchgrass Rhizosphere	VRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0070678_1002591832	3300005456	Miscanthus Rhizosphere	MSGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKEVTLWLERHQPSPFK*
Ga0070706_1000069732	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEAEIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFKS*
Ga0074212_1232572	3300005491	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASTEPEANMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK*
Ga0070731_103915451	3300005538	Surface Soil	VRLYIVQMFYSSLKESGSLVAEAKNAVSALSKNDYVLMGFGDHTSAIAFASAEPEANMTAQFGRIRGENFSLVAFEAAWFLVGGMAKPVSEWMDRHKPSPFS*
Ga0068864_1000278495	3300005618	Switchgrass Rhizosphere	MILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0074470_107189891	3300005836	Sediment (Intertidal)	LYVVQMFYSSLKESGPLVAEAKNTVAALSKKDFVLMGFGEHTAAIAFSSAEPEDNMRAQFERIRGESFSLIAFEAAWMVGGNMSKDVSLWLERHRPSPFK*
Ga0068863_1001336572	3300005841	Switchgrass Rhizosphere	MSGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0068858_1022971521	3300005842	Switchgrass Rhizosphere	AGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0066789_104231952	3300005994	Soil	SSLKESGSLVAEAKNAVSALSKNDYVLMGFGDHTSAIAFASAEPEANMTAQFGRIRGENFSLVAFEAAWFLVGSMAKPVSDWMERHKPSPFN*
Ga0115026_115077341	3300009111	Wetland	EAKNTVSTLSKNDFVLMGFGEHTSAIAFVSNEPEANMTAQFGRIRGEKFSLVAFEVAWFLGGNMSKPVSDWLERHKPSPFKGG*
Ga0105248_100159293	3300009177	Switchgrass Rhizosphere	MFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0134126_130641822	3300010396	Terrestrial Soil	AEAKNTVAALSKNDFILMGFGDQTSAIAFSSAEPEANMEAQFGRIRGEKFSLIAFEAAWLLGGNLPKHVSDWMDRHKPSVFGEASAKQD*
Ga0134124_100394584	3300010397	Terrestrial Soil	MIAGSGTKGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK*
Ga0134122_114497802	3300010400	Terrestrial Soil	MFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0136623_100934732	3300012045	Polar Desert Sand	MFYSTLKESNQLVAETKYTVSNLSKKEFILMGFGEHTSAIAFVSNEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTT*
Ga0136623_101359072	3300012045	Polar Desert Sand	MFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFVSNEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTDNGKSTA*
Ga0136625_10879032	3300012091	Polar Desert Sand	MFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFVSNEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGK*
Ga0136621_10107602	3300012092	Polar Desert Sand	MFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTNAIAFVSSEPEANIIAQFGRIRGEKFSLVAFEAAWFLGGNLSKDVSDWLDRHKPSPFKTAESKSTT*
Ga0136638_100789612	3300012094	Polar Desert Sand	MFYSTLKESNQLVTETKNTVSNLSKKEFILMGFGEHTSAIAFVSKEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTQQ*
Ga0136619_100758822	3300012185	Polar Desert Sand	MFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFVSNEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTA*
Ga0137374_100513014	3300012204	Vadose Zone Soil	MFYSSLKDSNQLVTEAKNTVAFLSKNDFVLMGFGEHTSAIAFASAEPEANMSAQFGRIRGEKFSLVAFEVAWFLGGNMSKPVNDWLERHKPSPFK*
Ga0137381_110346292	3300012207	Vadose Zone Soil	EAKNAVAALSKNDFILMGFGDYTSAIAFSSDEPEANMSAQFGRIRGEKFSLVAFEAAWFLGGNMSKPVSDWLDRHKPSPFK*
Ga0137387_103466352	3300012349	Vadose Zone Soil	METFYKEEPPVRLYVVQMFYPSLKESSQLVAEAKNAVAALSKNDFILMGFGDYTSAIAFSSDEPEANMSAQFGRIRGEKFSLVAFEAAWFLGGNMSKPVSDWLDRHKPSPFK*
Ga0137385_108937541	3300012359	Vadose Zone Soil	FLRRKIEQAFRETPRKGNRRARSVAYIMETFYKEEPPVRLYVVQMFYPSLKESSQLVAEAKNAVAALSKNDFILMGFGDYTSAIAFSSDEPEANMSAQFGRIRGEKFSLVAFEAAWFLGGNMSKPVSDWLDRHKPSPFK*
Ga0136635_101065521	3300012530	Polar Desert Sand	MFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFVSSEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKEVSDWLDRHKPSPFKTANGKSTA*
Ga0136612_104098412	3300012680	Polar Desert Sand	MFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTNAIAFVSSEPEANIIAQFGRIRGEKFSLVAFEAAWFLGGNLSKDVSDWLDRHKPS
Ga0136614_100046867	3300012684	Polar Desert Sand	MFYSSLKENGQLVAETKNTVSNLAKKEFTLMGFGEHTSAIAFVSNEPEANITAQFGRIRGEKFSLVTFEAAWLLGGNLPKDVSDWLDRHKPSPFK*
Ga0136614_101579542	3300012684	Polar Desert Sand	MFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFISNEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTT*
Ga0136614_102612332	3300012684	Polar Desert Sand	MFYSTLKESNQLVAETKNTASNLSKKEFILMGFGEHTSAIAFVSNEPEANIAAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTA*
Ga0137394_102991922	3300012922	Vadose Zone Soil	MFYSTLKDCNQLVTEAKNAVSDLSKNDFILMGFGEHTSAIAFSSNEPEANIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFK*
Ga0157378_124943262	3300013297	Miscanthus Rhizosphere	MFYSSLKECAPLVAEAKNNVAALSKKDVVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASRVSANMSKDVTLWLERHQPSPFK*
Ga0163163_100986321	3300014325	Switchgrass Rhizosphere	PLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK*
Ga0132258_100877417	3300015371	Arabidopsis Rhizosphere	MFYSSLKECAPLVAEAKNNAAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK*
Ga0132258_103471653	3300015371	Arabidopsis Rhizosphere	MRLYVVQMFYSTLKESGPLVAETKNTASALSKNDFILMGFGEHTSAIAFVSDQPEADMTAQFGRIRGENFSLVAFEAAWFLGGNMPKSVSDWLDRHKPSPFK*
Ga0132255_1035682642	3300015374	Arabidopsis Rhizosphere	MIAWSGTKGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVPLW
Ga0180121_100866502	3300017695	Polar Desert Sand	VPLYVVQMFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFVSSEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKEVSDWLDRHKPSPFKTANGKSTA
Ga0180121_104199742	3300017695	Polar Desert Sand	SNLSKKEFILMGFGEHTSAIAFVSSEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTP
Ga0183260_101973732	3300017787	Polar Desert Sand	VPLYVVQMFYSTLKESNQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFISNEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTT
Ga0183260_103643192	3300017787	Polar Desert Sand	MSRLSLGEHHVSLYVVQMFYSTLKESSQLVAETKNTVSHLSKKEFILMGFGEHTSAIAFVSNEPEAAITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTA
Ga0136617_100041968	3300017789	Polar Desert Sand	VPLYVVQMFYSSLKENGQLVAETKNTVSNLAKKEFTLMGFGEHTSAIAFVSNEPEANITAQFGRIRGEKFSLVTFEAAWLLGGNLPKDVSDWLDRHKPSPFK
Ga0136617_100088243	3300017789	Polar Desert Sand	VPLYVVQMFYSTLKESTQLVAETKNTVSNLSKKEFILMGFGEHTSAIAFVSSEPEANITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTP
Ga0136617_102042922	3300017789	Polar Desert Sand	VSLYVVQMFYSTLKESSQLVAETKNTVSHLSKKEFILMGFGEHTSAIAFVSNEPEAAITAQFGRIRGEKFSLVAFEAAWLLGGNMSKDVSDWLDRHKPSPFKTANGKSTA
Ga0184604_100625442	3300018000	Groundwater Sediment	VRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLSGNMSKPVSDWVERHKPSPFKS
Ga0184608_102317922	3300018028	Groundwater Sediment	VRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGKIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFKS
Ga0184620_101805991	3300018051	Groundwater Sediment	VRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVDRHKPSPFK
Ga0184638_10009124	3300018052	Groundwater Sediment	VRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEAEIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFKS
Ga0184626_101017572	3300018053	Groundwater Sediment	VRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFKS
Ga0184621_101926752	3300018054	Groundwater Sediment	EAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRTQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK
Ga0184623_102782972	3300018056	Groundwater Sediment	VRLYVVQMFYSTLKDSNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFK
Ga0184618_103008582	3300018071	Groundwater Sediment	VRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFK
Ga0184635_104163291	3300018072	Groundwater Sediment	SPTGAKQGRPRQPAYDRLGRKPRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRTQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK
Ga0190274_101052992	3300018476	Soil	MILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0190274_103864232	3300018476	Soil	VRLYVVQMFYSSLKESGPLVAEAKNTVAALSKKDFVLMGFGEHTAAIAFSSEEPETNMRAQFERIRGENFSLVAFEAAWMVGGNMSKDVSLWLERHQSPFKS
Ga0193739_11248422	3300020003	Soil	VRLYVVQMFYSTLKDSNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSP
Ga0210382_102229801	3300021080	Groundwater Sediment	LKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGKIRGEKYSWVAFEAAWFLSGNMSKPVSDWVERHKPSPFK
Ga0210384_106070922	3300021432	Soil	VRLYVVQMFYSSLKESGQLVAETRTIASELSRNEFILMGFGEHTSAIAFASSRPEADMTAQFGRIRGENFSLIAFEAAWFLGGSLPKPVSDWLDRHKPSPFK
Ga0224452_11591651	3300022534	Groundwater Sediment	NTVSALSKNDFILMGFGEHTSAIAFSSNEPEAEIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFKS
Ga0222623_104028241	3300022694	Groundwater Sediment	KPVRLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEAEIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFKS
Ga0222622_103571642	3300022756	Groundwater Sediment	MIVGCQTKGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRTQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK
Ga0207699_102758031	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRLYIVQMFYPSLKESGALVAEAKNTVAALSKNDFILMGFGDQTSAIAFSSAEPEANMEAQFGRIRGEKFSLIAFEAAWLLGGNLPKHVSDWMDRHKPSVFGEASAKQD
Ga0207684_103388672	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPLYVVQMFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEANIAAQLGRIRGEKYSWVAFEAAWFLDGNMSKPVSDWVERHKPSPFK
Ga0207650_115087452	3300025925	Switchgrass Rhizosphere	MILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK
Ga0207644_101761572	3300025931	Switchgrass Rhizosphere	MAGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0207658_119669731	3300025986	Switchgrass Rhizosphere	LYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0207703_105316661	3300026035	Switchgrass Rhizosphere	MAGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0207648_119414171	3300026089	Miscanthus Rhizosphere	SQCYRRRRPAQNMAGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0207683_102269222	3300026121	Miscanthus Rhizosphere	MSGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKEVTLWLERHQPSPFK
Ga0209579_105330281	3300027869	Surface Soil	VRLYIVQMFYSSLKESGSLVAEAKNAVSALSKNDYVLMGFGDHTSAIAFASAEPEANMTAQFGRIRGENFSLVAFEAAWFLVGGMAKPVSEWMDRHKPSPFS
Ga0209450_103507051	3300027885	Freshwater Lake Sediment	LKESAPLVAEAKSAVAALSKNDFILMGFGEHTSAIAFVSDEPEANMTAQFGRIRGEKFSLVAFEAAWFLGGNLPKPASDWLERHKPSPFKGG
Ga0209048_100869882	3300027902	Freshwater Lake Sediment	VPLYVVQMFYSTLKESSQLVAEAKNTVSALSKNDFTLMGFGEHTSAIAFSSNEPEANMAAQFGRIRGEKFSLVAFEAAWFLGGNMSKPVNDWLERHRPSPFKGDDRKGHA
Ga0209048_104162122	3300027902	Freshwater Lake Sediment	VRLYVVQMFYSSLKESGALVAEAKNTVAALSKKDFVLMGFGEHTAAVAFASAEPEANMRAQFERIRGENFSLIAFEAAWIVGGSMSKDVTLWLERHQPSPFK
Ga0268265_124723011	3300028380	Switchgrass Rhizosphere	KAGRGKARMILRGMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0268264_124814781	3300028381	Switchgrass Rhizosphere	GMESRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANIRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0307503_103165871	3300028802	Soil	VAEAKNTVAALSKKDFVLMGFGEHTAAIAFSSAEPETNMRAQFERIRGENFSLIAFEAAWMVGGNMSKDVSLWLERHQPSPFK
Ga0268298_102377102	3300028804	Activated Sludge	VPLYVVQMFYATLKESAPLVAEAKSAVASLSKNDFILMGFGEHTSAIAFVSNEPEANMTAQFGRIRGDRFSLVAFEAAWFLGGNLPKPASDWLERHK
Ga0307469_112108251	3300031720	Hardwood Forest Soil	CNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFK
Ga0307468_1013464731	3300031740	Hardwood Forest Soil	GRTPRGVNVRLYVVQMFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVGGNMSKEATLWLERHQPSPFK
Ga0315288_103876542	3300031772	Sediment	VRLYVVQMFYSSLKESGALVAEVKNTVAALSKKDFVLMGFGEHTAAVAFSSTEPETNMRAQFERIRGENFSLVAFEAAWIVGGSMSKDVSLWLERHQPSPFK
Ga0315290_100916103	3300031834	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASAEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKEVSLWLERHQPSPFK
Ga0315290_103166422	3300031834	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLIGFGEHTAAIAFASEEPEANMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315290_108310992	3300031834	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASTEPEANMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315280_105081851	3300031862	Sediment	APLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASEEPEANMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315297_102901951	3300031873	Sediment	HQGGIVRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASAEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKEVSLWLERHQPSPFK
Ga0315297_107155722	3300031873	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASEEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQP
Ga0315297_112736812	3300031873	Sediment	VRLYVVQMFYSSLKESGALVAEVKNTVAALSKKDFVLMGFGEHTAAVAFSSTEPETNMRAQFERIRGENFSLVAFEAAWIVGGSMSKDVSLWLERHQ
Ga0315278_100020903	3300031997	Sediment	VPLYVVQMFYSTLKESSQLVAEAKNTVSALSKNDFTLMGFGEHTSAIAFSSNEPEANMAAQFGRIRGEKFSLVAFEAAWFLGGNMSKPVNDWLERHRPSPFKGDDRKGHT
Ga0315278_101766552	3300031997	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASEEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315278_104674081	3300031997	Sediment	SKKDFVLMGFGEHTAAVAFSSTEPETNMRAQFERIRGENFSLVAFEAAWIVGGSMSKDVSLWLERHQPSPFK
Ga0315274_101336763	3300031999	Sediment	VRLYVVQMFYSSLKESGALVAEVKNTVAALSKKDFVLMGFGEHTAAVAFSSTEPETNMRAQFERIRGENFSLAAFEAAWIVGGSMSKDVSLWLERHQPSPFK
Ga0315272_107241392	3300032018	Sediment	KESGALVAEVKNTVAALSKKDFVLMGFGEHTAAVAFSSTEPETNMRAQFERIRGENFSLVAFEAAWIVGGSMSKDVSLWLERHQPSPFK
Ga0315284_114772133	3300032053	Sediment	VAALSKKDFVLMGFGEHTAAIAFASAEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKEVSLWLERHQPSPFK
Ga0315905_106401191	3300032092	Freshwater	VRLYVVQMFYSSLKESGHLVAEAKNTVSTLSKNDFVLMGFGEHTSAIAFVSSEPEANMTAQFGRIRGEKFSLVAFEVAWFLGGNMSKPVSDWLERHKPSPFKGG
Ga0315277_105009183	3300032118	Sediment	VRLYVVQMFYSSLKESGALVAEVKNTVAALSKKDFVLMGFGEHTAAVAFSSTEPEANMRAQFERIRGENFSLVAFEAAWIVGGSMSKDVSLWLERHQPSPFK
Ga0315292_105311282	3300032143	Sediment	LSKNDFTLMGFGEHTSAIAFSSNEPEANMAAQFGRIRGEKFSLVAFEAAWFLGGNMSKPVNDWLERHRPSPFKGDDRKGHT
Ga0315283_117853121	3300032164	Sediment	PGRVSSITFHQGGIVRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASEEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315276_112531152	3300032177	Sediment	NVAALSKKDFVLMGFGEHTAAIAFASTEPEANMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315271_100710654	3300032256	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVSALSKKDFVLMGFGEHTAAIAFASEEPEANMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315271_101159841	3300032256	Sediment	VRLYVVQMFYSSLKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASDEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315271_104884961	3300032256	Sediment	AKRGGTRQGGYHRPGSEPGRAHVRLYVVQMFYSSLKECAPLVAEAKNTASALSKKDFVLLGFGDHTAAIAFASDEPQAGMQAQFGRIRGENFSLVAFEAASLVGGSMPKEVSLWLDRHPPSPFI
Ga0315271_117781751	3300032256	Sediment	VRLYVVQMFYSSLKESAPLVAEARNNVAALSKKDFVLMGFGEHTAAIAFASEEPEPNMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315270_102261233	3300032275	Sediment	VRLYVVQMFYSSLKESGALVAEVKNTVAALSKKDFVLMGFGEHTAAVAFSSTEPETNMRAQFERIRGENFSLVAFEAAWIVGGSMSKDVSLWLERHQPSP
Ga0315286_108097993	3300032342	Sediment	AALSKKDFVLMGFGEHTAAIAFASAEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKEVSLWLERHQPSPFK
Ga0315286_109336111	3300032342	Sediment	LKESAPLVAEAKNNVAALSKKDFVLMGFGEHTAAIAFASEEPETNMRAQFERIRGENFSLIAFEAAWIVGGNMSKDVSLWLERHQPSPFK
Ga0315273_104745511	3300032516	Sediment	VRLYVVQMFYSSLKECAPLVAEAKNTASALSKKDFVLLGFGEHTAAIAFASDEPQAGMQAQFGRIRGENFSLVAFEAASLVGGSMSKEVSLWLDRHPPSPFI
Ga0316622_1012816822	3300033416	Soil	VRLYVVQMFYSSLKESGHLVAEAKNTVSTLSKNDFVLMGFGEHTSAIAFVSNEPEANMTAQFGRIRGEKFSLVAFEVAWFLGGNMSKPVSDWLERHKPSPFKGG
Ga0364945_0269412_242_526	3300034115	Sediment	FYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFK
Ga0364929_0243023_200_487	3300034149	Sediment	MFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVSANMSKDVTLWLERHQPSPFK
Ga0364933_035202_297_584	3300034150	Sediment	MFYSSLKECAPLVAEAKNNVAALSKKDFVLLGFGEHTAAIAFSSDEPEANMRAQFGRIRGENFSLIAFEAASLVGGNMSKEVTLWLERHQPSPFK
Ga0364934_0052460_26_313	3300034178	Sediment	MFYSTLKDCNQLVSEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFK
Ga0364943_0065256_749_1036	3300034354	Sediment	MFYSTLKDCNQLVTEAKNTVSALSKNDFILMGFGEHTSAIAFSSNEPEADIAAQLGRIRGEKYSWVAFEAAWFLGGNMSKPVSDWVERHKPSPFK
Ga0364943_0069763_337_660	3300034354	Sediment	MQGEPMRLYVVQMFYSGLKESGPLVAEAKNTASALSKNDFILMGFGEHTSAIAFASDQPEADMTAQFGRIRGENFSLVAFEAAWFLGGNLPKPVSDWLDRHKPSPFK
Ga0364943_0243614_173_460	3300034354	Sediment	MFYSTLKECNQLVSEAKNAVSDLSKNDFILMGFGEHTSAIAFSSNEPEANIETQFARIRGEKFSWVAFEAAWFLGGSMSKPVSEWMERHKPSPFK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences