Metagenome Family F072873

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072873
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	45 residues
Representative Sequence	MISTFLFMATMVVTGIPTAILFIPWCWLTGNVLPLYKGTRFMLSSSC
Number of Associated Samples	101
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.69 %
% of genes near scaffold ends (potentially truncated)	99.17 %
% of genes from short scaffolds (< 2000 bps)	80.17 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (22.314 % of family members)
Environment Ontology (ENVO)	Unclassified (52.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.33% β-sheet: 0.00% Coil/Unstructured: 46.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF02875	Mur_ligase_C	30.58
PF08245	Mur_ligase_M	23.97
PF01678	DAP_epimerase	17.36
PF02016	Peptidase_S66	4.96
PF00294	PfkB	1.65
PF02308	MgtC	1.65
PF01048	PNP_UDP_1	1.65
PF01161	PBP	0.83
PF13231	PMT_2	0.83
PF05598	DUF772	0.83
PF13469	Sulfotransfer_3	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0253	Diaminopimelate epimerase	Amino acid transport and metabolism [E]	17.36
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	4.96
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	1.65
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	1.65
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	1.65
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	1.65
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	1.65
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.32 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	28.10 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	28.10 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28.10 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	8.26 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	4.96 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	3.31 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4.13 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4.13 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	2.48 %
Unclassified	root	N/A	1.65 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4.13 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4.13 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	2.48 %
Unclassified	root	N/A	1.65 %
Granulicella sp. S190	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S190	0.83 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001401\|JGI20189J14885_1004252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2722	Open in IMG/M
3300005591\|Ga0070761_10575539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	699	Open in IMG/M
3300009518\|Ga0116128_1164807	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300009615\|Ga0116103_1049489	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300009632\|Ga0116102_1063174	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300009645\|Ga0116106_1257633	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300009646\|Ga0116132_1059211	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300009665\|Ga0116135_1006519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4442	Open in IMG/M
3300014152\|Ga0181533_1291165	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300014153\|Ga0181527_1147033	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300014153\|Ga0181527_1377488	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300014155\|Ga0181524_10028278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	3929	Open in IMG/M
3300014155\|Ga0181524_10061077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2308	Open in IMG/M
3300014158\|Ga0181521_10578714	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300014159\|Ga0181530_10395769	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300014160\|Ga0181517_10582966	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300014161\|Ga0181529_10135340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	1519	Open in IMG/M
3300014164\|Ga0181532_10070154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2248	Open in IMG/M
3300014168\|Ga0181534_10460258	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300014199\|Ga0181535_10092352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1962	Open in IMG/M
3300014199\|Ga0181535_10135017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1560	Open in IMG/M
3300014200\|Ga0181526_10840268	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300014201\|Ga0181537_11181057	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300014489\|Ga0182018_10516446	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300014491\|Ga0182014_10508161	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300014491\|Ga0182014_10655201	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300014493\|Ga0182016_10324416	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300014495\|Ga0182015_10400951	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300014496\|Ga0182011_10648321	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300014499\|Ga0182012_10043343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	3695	Open in IMG/M
3300014838\|Ga0182030_11688671	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300014839\|Ga0182027_10959070	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300014839\|Ga0182027_11336355	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300014839\|Ga0182027_11673093	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300014839\|Ga0182027_12062264	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300017935\|Ga0187848_10391612	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300017988\|Ga0181520_10029865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5763	Open in IMG/M
3300017988\|Ga0181520_11124817	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300017988\|Ga0181520_11151256	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300018004\|Ga0187865_1138811	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300018014\|Ga0187860_1353758	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300018023\|Ga0187889_10525882	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300018024\|Ga0187881_10219585	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300018026\|Ga0187857_10449013	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300018043\|Ga0187887_10033526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3220	Open in IMG/M
3300018044\|Ga0187890_10263619	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300018044\|Ga0187890_10657782	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300018057\|Ga0187858_10331182	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300018057\|Ga0187858_10404630	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M
3300018085\|Ga0187772_10309484	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300019787\|Ga0182031_1314085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1989	Open in IMG/M
3300021405\|Ga0210387_11087654	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300022872\|Ga0224526_1066533	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300022872\|Ga0224526_1066739	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300023075\|Ga0224520_1067028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	813	Open in IMG/M
3300023090\|Ga0224558_1102981	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300023091\|Ga0224559_1082149	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300023254\|Ga0224524_1074101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S190	605	Open in IMG/M
3300023258\|Ga0224535_1011102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2197	Open in IMG/M
3300024233\|Ga0224521_1032219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	1197	Open in IMG/M
3300024295\|Ga0224556_1178865	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300025406\|Ga0208035_1033646	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300025506\|Ga0208937_1073936	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300025612\|Ga0208691_1106102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	633	Open in IMG/M
3300026041\|Ga0207639_11284273	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300026456\|Ga0255351_1056942	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300027019\|Ga0207857_1017614	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300028068\|Ga0255355_1039034	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300028090\|Ga0255349_1000804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13257	Open in IMG/M
3300028562\|Ga0302151_10110345	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300028574\|Ga0302153_10256247	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300028745\|Ga0302267_10479855	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300028779\|Ga0302266_10019080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3641	Open in IMG/M
3300028813\|Ga0302157_10450078	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300028868\|Ga0302163_10171987	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028873\|Ga0302197_10030820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3305	Open in IMG/M
3300028874\|Ga0302155_10503467	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300029907\|Ga0311329_10677689	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300029911\|Ga0311361_11097894	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300029915\|Ga0311358_10126179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2524	Open in IMG/M
3300029916\|Ga0302148_1121823	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300029917\|Ga0311326_10051129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2398	Open in IMG/M
3300029917\|Ga0311326_10635229	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300029918\|Ga0302143_1051448	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300029919\|Ga0302141_1155941	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300029920\|Ga0302142_1118134	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300029922\|Ga0311363_10042158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	7296	Open in IMG/M
3300029945\|Ga0311330_10713540	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300029952\|Ga0311346_10410569	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300029953\|Ga0311343_10945801	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300029955\|Ga0311342_10250713	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300030014\|Ga0302175_10062670	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300030020\|Ga0311344_10118844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2940	Open in IMG/M
3300030020\|Ga0311344_11443136	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300030044\|Ga0302281_10263476	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300030507\|Ga0302192_10212454	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300030518\|Ga0302275_10584708	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300030519\|Ga0302193_10204516	Not Available	1100	Open in IMG/M
3300030519\|Ga0302193_10446670	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300030838\|Ga0311335_10017210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4359	Open in IMG/M
3300031232\|Ga0302323_100454035	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300031232\|Ga0302323_101095970	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031235\|Ga0265330_10175890	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300031241\|Ga0265325_10091199	Not Available	1502	Open in IMG/M
3300031259\|Ga0302187_10438455	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300032665\|Ga0316221_1031886	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300032722\|Ga0316231_1019162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4365	Open in IMG/M
3300032753\|Ga0316224_1216287	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300032805\|Ga0335078_10077898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4834	Open in IMG/M
3300032805\|Ga0335078_12123841	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300032828\|Ga0335080_11550835	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300033402\|Ga0326728_10131560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2813	Open in IMG/M
3300033405\|Ga0326727_10655112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	855	Open in IMG/M
3300033755\|Ga0371489_0069405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2210	Open in IMG/M
3300033755\|Ga0371489_0444073	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300033818\|Ga0334804_007037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4846	Open in IMG/M
3300033818\|Ga0334804_050593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1209	Open in IMG/M
3300033818\|Ga0334804_084807	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300033982\|Ga0371487_0019558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	4713	Open in IMG/M
3300033983\|Ga0371488_0392331	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300034091\|Ga0326724_0338980	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.52%
Host-Associated	Host-Associated	2.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.64%
Aquatic	Environmental → Aquatic	33.88%
Plants	Host-Associated → Plants	2.48%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	46.28%
Freshwater	Environmental → Aquatic → Freshwater	33.88%
Soil	Environmental → Terrestrial → Soil	17.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	46.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	31.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.05%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.65%
Loam	Environmental → Terrestrial → Soil → Loam	1.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	46.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	23.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	22.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	14.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	12.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.44%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.79%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.96%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.13%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.48%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023254	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T75	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300028068	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T75	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20189J14885_10042525	3300001401	Arctic Peat Soil	MIRTIIFVTNMVVLGIPSALLFIPWCWITGNVLPLYKATRFMLFSSCRLAG
Ga0070761_105755391	3300005591	Soil	MIRSLLFLANMIIWGIPSALLFIPWCWLTGNVLPLYKATRFILSS
Ga0116128_11648071	3300009518	Peatland	MIFYLIFMTTMVVTGIPTAILFIPWCWLTGNVLPLYKGTRFMLHSSCWM
Ga0116103_10494892	3300009615	Peatland	MIWSLIFITSMVLTGIPTALLFIPWCWLTGNVLPLYKATRFMLSSSCRL
Ga0116102_10631742	3300009632	Peatland	MIRSLLFLANMVIWGIPSAILFIPWCWLTGDVLPLY
Ga0116106_12576331	3300009645	Peatland	MLRSLLFLANMVILSIPSAILFIPWCWLTGNVLPLYKATR
Ga0116132_10592111	3300009646	Peatland	MIASFIFIATMVVTGIPTAILFIPWCWLTGNVLPLYKGTRF
Ga0116135_10065195	3300009665	Peatland	MIRSLLFLANMVFWGIPSALLFIPWCWVTGDVLPLYK
Ga0181533_12911651	3300014152	Bog	MIWSLIFIANMVLLGIPSALLFIPWCWMTGNVLPLYK
Ga0181527_11470331	3300014153	Bog	MIWSLIFLANMVVLGIPSACLFIPWCWMTGNVLPLYKATRF
Ga0181527_13774881	3300014153	Bog	MFFYLIFMATMVITGIPTAMLFIPWCWLTGNVLPLYKGTR
Ga0181524_100282786	3300014155	Bog	MIWSLIFLANMVVLGIPSACLFIPWCWMTGNVLPLY
Ga0181524_100610771	3300014155	Bog	VISSFIFMATMVITGIPTAMLFIPWCWLTGNVLPLYKGTRFML
Ga0181521_105787141	3300014158	Bog	MIWSLLFLANMIVTGIPTALLFIPWCWLTGDVLPLYKGTRFMLSSSC
Ga0181530_103957691	3300014159	Bog	MIFYLIFMATMVVTGIPTAILFIPWCAFTGNVLPLYKGTRFMLHSSCWMA
Ga0181517_105829662	3300014160	Bog	MISSFIFMATMVITGIPTALLFIPWCWLTGNVLPLYKGTRFMLH
Ga0181529_101353401	3300014161	Bog	MISTFLFMATMVVTGIPTAILFIPWCWLTGNVLPL
Ga0181532_100701543	3300014164	Bog	MVVLGIPSAILFIPWCWITGNVMPLYKATRFMLYSSCRFAGVRFQVAGRDRIP
Ga0181534_104602581	3300014168	Bog	MLSSLIFVATMVVTGIPTALLFIPWCWLTGNVLPLYRGTRFMLSSGCW
Ga0181535_100923521	3300014199	Bog	MISTFLFMATMVVTGIPTAILFIPWCWLTGNVLPLYKGTRFMLSSSC
Ga0181535_101350171	3300014199	Bog	MISTFLFMATMVVTGIPTAILFIPWCWLTGDVLPLYKGTRFMLSSSCWMAGV
Ga0181526_108402681	3300014200	Bog	LIHSLIFIVNMFVLGIPTALFFIPWCWLTGDVGPLYRGTRFMLWSS
Ga0181537_111810572	3300014201	Bog	MIRSLLFLANMVFWGIPSGLLFIPWCWLTGNVRPLYK
Ga0182018_105164462	3300014489	Palsa	MISTFLFMATMVITGIPTAMLFIPWCCLTGNVLPL
Ga0182014_105081612	3300014491	Bog	MIFYLIFMATMVVTGIPTAILFIPWCALTGNVLPLYKGTRFMLSSSCWMAGVRFHVEGR
Ga0182014_106552012	3300014491	Bog	MISTFVFMTTMVILGIPSAILFIPWCAITGNVLPLYKATRFMLSS
Ga0182016_103244161	3300014493	Bog	MLSSLIFIATMIVTGIPTALLFIPWCWMTGNVMPLY
Ga0182015_104009512	3300014495	Palsa	MIRTFLFLANMVFWGIPSGLLFIPWCWITGNVLPL
Ga0182011_106483212	3300014496	Fen	MIYSLLFMATMVITGIPTAILFIPWCALTGNVLPLYKGTRFMLSSSCWMAGVRF
Ga0182012_100433431	3300014499	Bog	MMASFLFIVTMVVTGIPTAVLFIPWCWLTGNVLPLYKSTRFM
Ga0182030_116886712	3300014838	Bog	MIFYLIFMATMVVTGIPTAILFIPWCALTGNVLPLYKGTR
Ga0182027_109590702	3300014839	Fen	MLSSLIFIATMIVTGIPTALLFIPWCWMTGNVMPLYRGTRF
Ga0182027_113363552	3300014839	Fen	MFFYLIFMATMVVTGIPTAILFIPWCAITGNVLPLYKGTRFMLSSSCWMAGVRFHVTGKENI
Ga0182027_116730932	3300014839	Fen	MIFFLIFMATMVVTGIPTAILFIPWCALTGDVLPLYKGTRFMLSSSCWMAGVRF
Ga0182027_120622641	3300014839	Fen	MIFFLIFMATMVVTGIPTALLFIPWCALTGDVLPLYKGTRFMLATS*
Ga0187848_103916121	3300017935	Peatland	VISSFIFMATMVITGIPTAMLFIPWCWLTGNVLPLYKGTRFMLSSSCWMAGVRFHVTGLE
Ga0181520_100298651	3300017988	Bog	MIYSLIFMATMVITGIPTALLFIPWCWLTGNVMPLYKGTRFMLSSSCWM
Ga0181520_111248171	3300017988	Bog	MLSSLIFIATMIVTGIPTALLFIPWCWMTGNVMPLYRGTRFMLS
Ga0181520_111512561	3300017988	Bog	MLSSLIFITTMVVLGIPTAILFIPWCWMSGNVLPLYKGTRFMLASSC
Ga0187865_11388112	3300018004	Peatland	MISSPIYMATMVITGNPTATLFIPWCWLTSNVRPLYKGTRFMLSSSFWMAGVRFHV
Ga0187860_13537581	3300018014	Peatland	MIWSLIFITDMVVLGIPSALLFIPWCWITGNVLPLYKATRFMLSSSCR
Ga0187889_105258822	3300018023	Peatland	MIFYLIFMTTMVVTGIPTAILFIPWCWLTGNVLPLYK
Ga0187881_102195852	3300018024	Peatland	MIWSLIFIANMFVLGIPSALLFIPWCWITGNVMPLYKATRFMLYS
Ga0187857_104490132	3300018026	Peatland	MFFYLIFMATMVITGIPTAILFIPWCALTGNVLPLYKGTRFMLSSSCWMAGVRF
Ga0187887_100335261	3300018043	Peatland	MISTFLFMATMVVTGIPTAILFIPWCWLTGDVLPLYKGTRFMLSSSCWMA
Ga0187890_102636192	3300018044	Peatland	MIPFFIFMATMVVTGIPTAILFIPWCWLTGNVLPLYKGTRFMLSSSCWMAGVRFHV
Ga0187890_106577822	3300018044	Peatland	MISSFIFMATMVITGIPTAILFIPWCWLTGNVLPLYKGTRFMLSSSCWMSGVRFHT
Ga0187858_103311822	3300018057	Peatland	VISSFIFMATMVITGIPTAMLFIPWCWLTGNVLPLYKGTR
Ga0187858_104046302	3300018057	Peatland	MIFYLIFMTTMVVTGIPTAILFIPWCWLTGNVLPLY
Ga0187772_103094841	3300018085	Tropical Peatland	MIWTLIFIANMVILGIPSALLFIPWCWMTGNVLPLYK
Ga0182031_13140851	3300019787	Bog	MIASLLFMATMIVTGIPTAVLFIPWCWLTGNVLPLYKGTRFMLSSSCWM
Ga0210387_110876541	3300021405	Soil	MIRTIIFVANMVVLGIPSALLFIPWCWLTGNVLPLYKATR
Ga0224526_10665332	3300022872	Soil	MLFSLIFVATMVVTGIPTALLFIPWCWLTGNVLPLQRP
Ga0224526_10667392	3300022872	Soil	MISSLIFITTMVLTGIPTAILFIPWCWLTGNVLPLYKGTRFMLSS
Ga0224520_10670282	3300023075	Soil	MIYTFIFMATMVITGIPTAVLFIPWCWLTGNVLPLYKGTRFMLFS
Ga0224558_11029812	3300023090	Soil	MIWSLIFITNMIVLGIPSALLFIPWCWITGDVLPLYRATRFML
Ga0224559_10821492	3300023091	Soil	MIFFLIFMATMVVTGIPTALLFIPWCALTGNVLPLYKGTRFMLATSCW
Ga0224524_10741012	3300023254	Soil	MIYTFIFMATMVITGIPTAVLFIPWCWLTGNVLPLYKGTRFMLFSSCWMSGVRFHVT
Ga0224535_10111021	3300023258	Soil	MFFYFLFMATMVVTGIPTAILFIPWCWLTGNVLPLY
Ga0224521_10322193	3300024233	Soil	MIYTFIFMATMVITGIPTAVLFIPWCWLTGNVLPLYK
Ga0224556_11788652	3300024295	Soil	MIRSLLFLANMVFWGIPSALLFIPWCWLTGNVLPLYKAT
Ga0208035_10336461	3300025406	Peatland	MIWSLIFITNMVVLGIPSALLFIPWCWITGNVLPLY
Ga0208937_10739362	3300025506	Peatland	MIASFIFIATMVVTGIPTAILFIPWCWLTGNVLPLYKGTRFMLSSSCWMAGVRFRTV
Ga0208691_11061021	3300025612	Peatland	MIPFFIFMATMVITGIPTAVLFIPWCWLTGNVLPLYKGTRFMLSSSCRL
Ga0207639_112842731	3300026041	Corn Rhizosphere	MLASLIFISTMIVLGIPTAVLFIPWCWLTGDVMPLY
Ga0255351_10569421	3300026456	Soil	MISSLIFIATMIVTGIPTALLFIPWCWLTGNVLPLYKGTRFMLSSSCRL
Ga0207857_10176141	3300027019	Tropical Forest Soil	MLASLIFITNMIVTGIPTAVLFIPWCWMTGNVLPLYKGTRFMLSSSCRL
Ga0255355_10390341	3300028068	Soil	MIRSLLFLANMIVTGIPSALLFIPWCWITGNVLPLYKATRFMLSSSCRVAL
Ga0255349_100080414	3300028090	Soil	MIPFLIFMATMVVTGIPTAILFIPWCALTGNVLPLYKGTRFMLSSS
Ga0302151_101103451	3300028562	Bog	MFSAFLFMATMVVTGIPTALLFIPWAWLTGNAWPLYRGTRFMLAS
Ga0302153_102562472	3300028574	Bog	MLHTLIFLATMVVTGVPTALLFIPWCWMTGNVLPLYKGTRF
Ga0302267_104798552	3300028745	Bog	MISSFIFIATMIVTGIPTATLFIPWCWITGNVLPLYKGTRFMLA
Ga0302266_100190805	3300028779	Bog	MLHSLIFLATMVATGIPTAVLFIPWCWMTGNVLPLY
Ga0302157_104500782	3300028813	Bog	MIASLIFLATMVVTGIPTAVLFIPWAWVTGNANPLYK
Ga0302163_101719872	3300028868	Fen	MLSSLIFMATMVVTGIPTALLFIPWCWLSGNVLPLYKGTRFMLSSSC
Ga0302197_100308204	3300028873	Bog	MLFSLIFVATMVVTGIPTALLFIPWCWLTGNVLPLYK
Ga0302155_105034671	3300028874	Bog	MLSSLVFIATMVVTGIPTALLFIPWCWLTGNVLPLYKGTRFML
Ga0311329_106776892	3300029907	Bog	MLFSLIFVATMVVTGIPTALLFIPWCWLTGNVLPLYKGTRF
Ga0311361_110978941	3300029911	Bog	MLSSFLFIATMVVTGIPTAILFIPWCWLTGNVMPLYRGTRFMLASSCWMAG
Ga0311358_101261791	3300029915	Bog	MISTFVFMTTMVILGIPSAILFIPWCAITGNVLPLYKATRFMLS
Ga0302148_11218231	3300029916	Bog	MIFFLLFMATMVVTGIPTALLFIPWCALTGNVLPLYKGTRFMLSSSCW
Ga0311326_100511291	3300029917	Bog	MIASLIFLATMAVTGIPTAVLFIPWAWVTGNANPL
Ga0311326_106352292	3300029917	Bog	MISTFVFMTTMVILGIPSAILFIPWCAVTGNVLPLYKATRFMLSSSCWMAGV
Ga0302143_10514481	3300029918	Bog	MIFFLLFMATMVVTGIPTALLFIPWCALTGNVLPLYKGTRFMLSSSCWMAGVRFH
Ga0302141_11559411	3300029919	Bog	MIFYLIFMATMVVTGIPTAILFIPWCALTGNVLPLYKG
Ga0302142_11181342	3300029920	Bog	MIFYLIFMATMVVTGIPTAILFIPWCALTGNVLPLYKGTRFMLSSSCWM
Ga0311363_100421581	3300029922	Fen	MIPFLIFMATMVVTGIPTAILFIPWCALTGNVLPLYKGTRFMLSSSCWMAGVRFHVEG
Ga0311330_107135401	3300029945	Bog	MISYLIFMATMVITGIPTAILFIPWCWMTGNVLPLYKGTRFMLSSSCWMAGVRFHT
Ga0311346_104105692	3300029952	Bog	MLHTLIFLATMVATGIPTAVLFIPWCWMTGNVLPLYKGTRFM
Ga0311343_109458011	3300029953	Bog	MVVLGIPTAVLFIPWCWITGNVLPLYKGTRFMLSSSCRMAG
Ga0311342_102507131	3300029955	Bog	MLSSLIFLATMVVTGIPTAVLFIPWCWITGNVLPLYKGTRFMLASSCRLAGV
Ga0302175_100626702	3300030014	Fen	MATMVVTGIPTALLFIPWCWLTGNVLPLYKGTRFMLS
Ga0311344_101188444	3300030020	Bog	MIYTFIFMANMVITGIPTAVLFIPWCWLTGNVMPLY
Ga0311344_114431362	3300030020	Bog	MISSFIFIATMIVTGIPTATLFIPWCWITGNVLPLYKGTRFMLASSCRLAGVR
Ga0302281_102634762	3300030044	Fen	MISSLIFMVTMIVTGIPTALLFIPWCWLTGNVLPLYKG
Ga0302192_102124541	3300030507	Bog	MLFSLIFVATMVVTGIPTALLFIPWCWLTGNVLPLYKGTRFMLSSSCRLA
Ga0302275_105847082	3300030518	Bog	MISSLIFIATMIVTGIPTALLFIPWCWLTGNVLPLYKGTRFMLSSSCR
Ga0302193_102045162	3300030519	Bog	MISSLLFMATMIVTGIPTAGLFIPWCWLTGNVLPLYKGTR
Ga0302193_104466702	3300030519	Bog	MLHTLIFLATMVATGIPTAVLFIPWCWMTGNVLPLYKGTRFMLASSCRLAGVGF
Ga0311335_100172105	3300030838	Fen	MIFTFLFMATMVITGIPTAVLFIPWCWLTGNVLPLYKGTRFMLASSCRMAGVRF
Ga0302323_1004540351	3300031232	Fen	MLASFIFFTTMIVTGIPTAGLLIPWCWLTGNVMPLYKGTRFMLASSCRLAGVRF
Ga0302323_1010959702	3300031232	Fen	MAMMVVTGIPTALLFISWCWLTGNVLPLYKGTRFMLSSSCRMAGVRFHTTGLENVPS
Ga0265330_101758901	3300031235	Rhizosphere	MIVTGIPTALLFIPWCWLTGNVLPLYKSTRFMLSSS
Ga0265325_100911992	3300031241	Rhizosphere	MIWSLIFITNMVVLGIPSALLFIPRCWITGNVLPLYKATRFM
Ga0302187_104384551	3300031259	Bog	MLSSLVFIATMVVTGIPTALLFIPWCWLTGNVLPLYKGTRFMLSSSCW
Ga0316221_10318861	3300032665	Freshwater	MFFTFIFMANMVITGIPTAILFIPWCWLTGNVGPLYKGTRFMLSSSC
Ga0316231_10191626	3300032722	Freshwater	MISYLIFMATMVITGIPTAILFIPWCWMTGNVLPLYK
Ga0316224_12162871	3300032753	Freshwater	MISYLIFMATMVITGIPTAILFIPWCWMTGNVLPLYKGTRFMLSSS
Ga0335078_100778981	3300032805	Soil	MFCSLLFLANMVLLGIPSALLFIPWCWLTGDVLPLYKATRFMLSSSC
Ga0335078_121238411	3300032805	Soil	MISSLIFIFNMIVLGIPSAIVFIPWCWLTGDVLPLYKATRFM
Ga0335080_115508352	3300032828	Soil	MVASLIFIANMVVLGIPSALLFIPWCWLTGNVSPLYKATRFMLSSS
Ga0326728_101315601	3300033402	Peat Soil	MIRSLLFLANMIILGIPSALVFIPWCWLTGNVLPLYKATRFMLCSSCRV
Ga0326727_106551123	3300033405	Peat Soil	MIWSLIFIANMVVLGIPSAFLFIPWCWMTGNVLPLYKATRFML
Ga0371489_0069405_1_141	3300033755	Peat Soil	MIWSLLFLANMIVTGIPTALLFIPWCWLTGNVLPLYKATRFMLSSSC
Ga0371489_0444073_448_585	3300033755	Peat Soil	MIYTFIFMANMVITGIPTAILFIPWCWLTGNVMPLYRGTRFMLSSS
Ga0334804_007037_1_162	3300033818	Soil	MISTFLFMATMVVTGIPTAILFIPWCWLTGDVLPLYKGTRFMLSSSCWMAGVRF
Ga0334804_050593_1105_1209	3300033818	Soil	MLSSLIFVTTMVILGIPSAVLFIPWTWITGNVAPL
Ga0334804_084807_1_114	3300033818	Soil	MIWSLIFITNMVVLGIPSALLFIPWCWITGNVLPLYKA
Ga0371487_0019558_4558_4713	3300033982	Peat Soil	MIYSFIFMATMVVTGIPTAVLFIPWCWLTGNVLPLYKGTRFMLASSCWMSGV
Ga0371488_0392331_497_643	3300033983	Peat Soil	MIFYLIFLATMVVTGIPTAILFIPWCALTGNVLPLYKGTRFMLHSSCWM
Ga0326724_0338980_1_123	3300034091	Peat Soil	MIWSLIFITNMVVLGIPSAILFIPWCWITGNVLPLYKATRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072873

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences