Metagenome / Metatranscriptome Family F072861

Basic Information
Family ID	F072861
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	59 residues
Representative Sequence	MQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGRIDMSPTLVRKNAAVKKRPSK
Number of Associated Samples	106
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.07 %
% of genes near scaffold ends (potentially truncated)	31.40 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (67.769 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.917 % of family members)
Environment Ontology (ENVO)	Unclassified (40.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.107 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.79% β-sheet: 6.98% Coil/Unstructured: 80.23%
Feature Viewer

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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00069	Pkinase	8.26
PF07152	YaeQ	7.44
PF00313	CSD	5.79
PF06826	Asp-Al_Ex	3.31
PF00691	OmpA	2.48
PF07676	PD40	1.65
PF12704	MacB_PCD	1.65
PF00881	Nitroreductase	1.65
PF00005	ABC_tran	0.83
PF02774	Semialdhyde_dhC	0.83
PF01061	ABC2_membrane	0.83
PF09932	DUF2164	0.83
PF13883	Pyrid_oxidase_2	0.83
PF00158	Sigma54_activat	0.83
PF13413	HTH_25	0.83
PF00593	TonB_dep_Rec	0.83
PF02321	OEP	0.83
PF00990	GGDEF	0.83
PF08240	ADH_N	0.83
PF03315	SDH_beta	0.83
PF00724	Oxidored_FMN	0.83
PF13442	Cytochrome_CBB3	0.83
PF00474	SSF	0.83
PF10518	TAT_signal	0.83
PF07366	SnoaL	0.83
PF07859	Abhydrolase_3	0.83
PF13672	PP2C_2	0.83
PF02892	zf-BED	0.83
PF13561	adh_short_C2	0.83
PF01436	NHL	0.83
PF00293	NUDIX	0.83
PF00581	Rhodanese	0.83
PF03364	Polyketide_cyc	0.83
PF01564	Spermine_synth	0.83
PF02661	Fic	0.83
PF06983	3-dmu-9_3-mt	0.83
PF01738	DLH	0.83
PF00080	Sod_Cu	0.83
PF01522	Polysacc_deac_1	0.83
PF05163	DinB	0.83
PF01048	PNP_UDP_1	0.83
PF13659	Obsolete Pfam Family	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	33.06
COG4681	Uncharacterized conserved protein YaeQ, suppresses RfaH defect	Function unknown [S]	7.44
COG2985	Uncharacterized membrane protein YbjL, putative transporter	General function prediction only [R]	3.31
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.65
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	0.83
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.83
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.83
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.83
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.83
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.83
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	0.83
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.83
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.83
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.83
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	0.83
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.77 %
Unclassified	root	N/A	32.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.77 %
Unclassified	root	N/A	32.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.77 %
Unclassified	root	N/A	32.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.05 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.22 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.83 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.22 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.83 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.83 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.22 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.83 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.83 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.83 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.22 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.83 %
Methylocystis silviterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis silviterrae	0.83 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.83 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.22 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.83 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.83 %
Meiothermus taiwanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus taiwanensis	0.83 %
Methylocystis silviterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis silviterrae	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.22 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.83 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.83 %
Meiothermus taiwanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus taiwanensis	0.83 %
Methylocystis silviterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis silviterrae	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11145581	Not Available	599	Open in IMG/M
3300000891\|JGI10214J12806_11371399	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300001431\|F14TB_102059769	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1701	Open in IMG/M
3300001849\|RCM26_1011690	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300003541\|JGI20214J51650_10706050	Not Available	707	Open in IMG/M
3300004114\|Ga0062593_100025437	All Organisms → cellular organisms → Bacteria	3247	Open in IMG/M
3300004114\|Ga0062593_100427880	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300004114\|Ga0062593_102381407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005093\|Ga0062594_101057447	Not Available	788	Open in IMG/M
3300005093\|Ga0062594_101269230	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005289\|Ga0065704_10572880	Not Available	622	Open in IMG/M
3300005295\|Ga0065707_10653889	Not Available	662	Open in IMG/M
3300005295\|Ga0065707_11170931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	501	Open in IMG/M
3300005328\|Ga0070676_10284641	Not Available	1115	Open in IMG/M
3300005330\|Ga0070690_100165145	Not Available	1520	Open in IMG/M
3300005331\|Ga0070670_100720394	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300005339\|Ga0070660_100974580	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300005354\|Ga0070675_100452833	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300005354\|Ga0070675_100504126	Not Available	1091	Open in IMG/M
3300005355\|Ga0070671_100045467	All Organisms → cellular organisms → Bacteria	3650	Open in IMG/M
3300005367\|Ga0070667_100179835	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300005533\|Ga0070734_10032433	All Organisms → cellular organisms → Bacteria → Proteobacteria	3292	Open in IMG/M
3300005543\|Ga0070672_100038715	Not Available	3646	Open in IMG/M
3300005564\|Ga0070664_102369225	Not Available	503	Open in IMG/M
3300005718\|Ga0068866_10735227	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005719\|Ga0068861_101959288	Not Available	584	Open in IMG/M
3300005843\|Ga0068860_102774673	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006046\|Ga0066652_101026684	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300006057\|Ga0075026_100283198	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300006844\|Ga0075428_102158856	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300006853\|Ga0075420_100000709	All Organisms → cellular organisms → Bacteria	27230	Open in IMG/M
3300006865\|Ga0073934_10612032	Not Available	636	Open in IMG/M
3300006876\|Ga0079217_10477588	All Organisms → cellular organisms → Bacteria → Proteobacteria	767	Open in IMG/M
3300006894\|Ga0079215_10029635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1941	Open in IMG/M
3300006894\|Ga0079215_10229002	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300006894\|Ga0079215_11598540	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300006918\|Ga0079216_11415833	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006953\|Ga0074063_11913872	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300007004\|Ga0079218_10795083	Not Available	908	Open in IMG/M
3300007004\|Ga0079218_11428554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300007076\|Ga0075435_100275168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1437	Open in IMG/M
3300009078\|Ga0105106_10672516	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300009087\|Ga0105107_11152426	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300009094\|Ga0111539_10380300	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300009101\|Ga0105247_10961402	Not Available	664	Open in IMG/M
3300009147\|Ga0114129_12891578	Not Available	568	Open in IMG/M
3300009156\|Ga0111538_12435352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300009162\|Ga0075423_13070357	Not Available	512	Open in IMG/M
3300009176\|Ga0105242_11754287	Not Available	658	Open in IMG/M
3300009176\|Ga0105242_11981072	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300009239\|Ga0103858_10095636	Not Available	739	Open in IMG/M
3300009553\|Ga0105249_12060720	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010320\|Ga0134109_10048551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300010323\|Ga0134086_10330358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300010329\|Ga0134111_10510715	Not Available	529	Open in IMG/M
3300010356\|Ga0116237_11341187	Not Available	590	Open in IMG/M
3300010362\|Ga0126377_13223356	Not Available	527	Open in IMG/M
3300010375\|Ga0105239_13100186	Not Available	541	Open in IMG/M
3300011412\|Ga0137424_1002304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1910	Open in IMG/M
3300011445\|Ga0137427_10000062	All Organisms → cellular organisms → Bacteria	56381	Open in IMG/M
3300012091\|Ga0136625_1064466	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300012199\|Ga0137383_10819729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300012201\|Ga0137365_10341817	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300012206\|Ga0137380_11334052	Not Available	602	Open in IMG/M
3300012208\|Ga0137376_11658690	Not Available	530	Open in IMG/M
3300012211\|Ga0137377_10072383	All Organisms → cellular organisms → Bacteria → Acidobacteria	3229	Open in IMG/M
3300012354\|Ga0137366_10151921	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300012358\|Ga0137368_10492632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300012362\|Ga0137361_10688088	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012526\|Ga0136637_1075861	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300012532\|Ga0137373_10419949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300012916\|Ga0157310_10340717	Not Available	603	Open in IMG/M
3300012987\|Ga0164307_10158403	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499	Open in IMG/M
3300013306\|Ga0163162_11506572	Not Available	766	Open in IMG/M
3300013308\|Ga0157375_10776427	Not Available	1108	Open in IMG/M
3300014272\|Ga0075327_1241064	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300014325\|Ga0163163_10000008	All Organisms → cellular organisms → Bacteria	286490	Open in IMG/M
3300014325\|Ga0163163_11048168	Not Available	879	Open in IMG/M
3300014326\|Ga0157380_11210462	Not Available	799	Open in IMG/M
3300015373\|Ga0132257_102041288	Not Available	740	Open in IMG/M
3300015374\|Ga0132255_102568526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300017654\|Ga0134069_1046917	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300017965\|Ga0190266_10653677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300018055\|Ga0184616_10415579	Not Available	504	Open in IMG/M
3300018067\|Ga0184611_1038991	Not Available	1551	Open in IMG/M
3300018076\|Ga0184609_10095638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300018081\|Ga0184625_10345342	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300018083\|Ga0184628_10087312	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300018422\|Ga0190265_11082749	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300018429\|Ga0190272_10999068	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300018469\|Ga0190270_10079981	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300018476\|Ga0190274_10442840	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300018476\|Ga0190274_11419864	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300018476\|Ga0190274_12761074	Not Available	588	Open in IMG/M
3300019360\|Ga0187894_10110693	All Organisms → cellular organisms → Bacteria → Acidobacteria	1451	Open in IMG/M
3300020193\|Ga0194131_10006038	All Organisms → cellular organisms → Bacteria	17062	Open in IMG/M
3300021067\|Ga0196978_1099393	Not Available	564	Open in IMG/M
3300023260\|Ga0247798_1056228	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300025900\|Ga0207710_10165741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M
3300025900\|Ga0207710_10454870	Not Available	661	Open in IMG/M
3300025923\|Ga0207681_10062663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis silviterrae	2561	Open in IMG/M
3300025925\|Ga0207650_10639541	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300025986\|Ga0207658_11024471	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300027826\|Ga0209060_10050830	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300027886\|Ga0209486_10087911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300027909\|Ga0209382_10381330	All Organisms → cellular organisms → Bacteria → Acidobacteria	1573	Open in IMG/M
3300028812\|Ga0247825_10141037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1648	Open in IMG/M
3300028889\|Ga0247827_10459708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300030339\|Ga0311360_11079961	Not Available	633	Open in IMG/M
3300031228\|Ga0299914_10005048	All Organisms → cellular organisms → Bacteria	9597	Open in IMG/M
3300031228\|Ga0299914_10679640	Not Available	871	Open in IMG/M
3300031716\|Ga0310813_10462178	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300031847\|Ga0310907_10402948	Not Available	713	Open in IMG/M
3300031908\|Ga0310900_11117974	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300031965\|Ga0326597_10954377	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300032002\|Ga0307416_100565690	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300032075\|Ga0310890_10509366	All Organisms → cellular organisms → Bacteria → Acidobacteria	916	Open in IMG/M
3300032075\|Ga0310890_11809201	Not Available	508	Open in IMG/M
3300032157\|Ga0315912_10141424	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300033513\|Ga0316628_100825250	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1224	Open in IMG/M
3300034194\|Ga0370499_0134951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus taiwanensis	634	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.94%
Host-Associated	Host-Associated	32.23%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.89%
Plants	Host-Associated → Plants	32.23%
Aquatic	Environmental → Aquatic	14.05%
Wastewater	Engineered → Wastewater	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.79%
Sediment	Environmental → Aquatic → Sediment	6.61%
Freshwater	Environmental → Aquatic → Freshwater	5.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.79%
Roots	Host-Associated → Plants → Roots	1.65%
Marine	Environmental → Aquatic → Marine	0.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Peat	Environmental → Terrestrial → Peat	0.83%
Cave	Environmental → Terrestrial → Cave	0.83%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Ice	Environmental → Aquatic → Freshwater → Ice	1.65%
Loam	Environmental → Terrestrial → Soil → Loam	1.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.65%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.83%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.65%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.83%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.83%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.83%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.83%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.83%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001849	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM26, ROCA_DNA190_2.0um_MCP-N_C_2b	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009239	Microbial communities of water from Amazon river, Brazil - RCM11	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_111455812	3300000787	Soil	MQQIHISPGKALCRFCGAQVSMNQLSAHIAKEHPRPTPGDMTPTLIRKKKAPRPRVIE*
JGI10214J12806_113713992	3300000891	Soil	QPLILLSMQRVHISPGKALCRFCGEQVSTNRLSTHIAKEHPRPGPINMSPTLVRKRAGAKKRPSK*
F14TB_1020597693	3300001431	Soil	MLLGMQRVHISPGKALCRFCGKQVATNRLSTHIAHDHPRPGRIDMSPTLVRKRAPAKKRSSG*
RCM26_10116902	3300001849	Marine Plankton	MLDPMQSVHISSGKALCRFCGEQMSVNRLSTHIAKEHVRPRQDMRPTLVRRAGAPLKRPE
JGI20214J51650_107060502	3300003541	Wetland	MQRVHIYPGKALCRFCGRQVATNSLSVHIAKEHPRAKDACMSPRLVSKRPAAKKRKPT*
Ga0062593_1000254374	3300004114	Soil	MQRVHIPPGNALCRSCGVQVPVNQLSTHIAKEHPRPARADMTPTLVRKRRAPKKPTRPGR
Ga0062593_1004278802	3300004114	Soil	MQRVHISPGKALCRFCGEQVSTNRLSTHIAKEHPRPGPINMSPTLVRKRAGAKKRPSK*
Ga0062593_1023814072	3300004114	Soil	MQNIYISPGKALCRFCGEQISTNSLSAHIGRVHPRPGPTDMSPTLRKRPSAKKIPPK
Ga0062594_1010574472	3300005093	Soil	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGRIDMSPTLVRKNAAVKKRPSK*
Ga0062594_1012692302	3300005093	Soil	VQNVYISPGKALCRFCGEQVAMNGLSTHIAKNHARPKRKNTSPKLVRKPAAPKAPAK*
Ga0065704_105728801	3300005289	Switchgrass Rhizosphere	MQRVHIPPGKALCRSCGVHVPVNQLSTHIAKEHPRPARADMTLTLVRKRRAPKKPTRPGR
Ga0065707_106538893	3300005295	Switchgrass Rhizosphere	MQRVHISPGKALCRFCGEQVATNRLSTHIAQEHPRPRRIDMSPTLVRKRAAVKK
Ga0065707_111709311	3300005295	Switchgrass Rhizosphere	MLVGMQRVHISPGKALCRFCGEKVPMNSLSTHIAKDHPRPGKIDMSPTLVRKRALVKKRSSK*
Ga0070676_102846411	3300005328	Miscanthus Rhizosphere	MQRIHISPGKALCRFCGVHVSMNQLSAHISKEHPRPSRGDMTPTLIRKKKAIRPRPGR*
Ga0070690_1001651452	3300005330	Switchgrass Rhizosphere	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKNAAVKKRPSK*
Ga0070670_1007203942	3300005331	Switchgrass Rhizosphere	MQRIHISPGKALCRFCGLQVSTNQLSAHIAKEHPRPSRADMTPTLIREEGASTALIA
Ga0070660_1009745802	3300005339	Corn Rhizosphere	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKIAAVKKRPSK*
Ga0070675_1004528331	3300005354	Miscanthus Rhizosphere	QNIYISPGKALCRFCGEQISTNSLSAHIGRVHPRPGPTDMSPTLRKRPSAKKIPPK*
Ga0070675_1005041262	3300005354	Miscanthus Rhizosphere	VQRVHISPGKALCRFCGEQIATNSLSTHIAREHPRPPRRDLSPQLMKKRSSGSTK
Ga0070671_1000454673	3300005355	Switchgrass Rhizosphere	MQRVHVSAGKALCRFCGKELPTNRLSTHIAKEHPRPRRLDMSPTLVRKRTPARKKKSN*
Ga0070667_1001798351	3300005367	Switchgrass Rhizosphere	MQSVQFSAGTALCRFCGETVSTNRLSTHIAKEHPRPGPIDMSPTLVPRRGP
Ga0070734_100324333	3300005533	Surface Soil	MQTLHISPGSALCRFCGETVSTNSLSKHIAAKHPRPRKKSLAPTLVRKPKAAPPTR*
Ga0070672_1000387152	3300005543	Miscanthus Rhizosphere	MQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGRIDMSPTLVRKNAAVKKRPSK*
Ga0070664_1023692252	3300005564	Corn Rhizosphere	MQRIHISPGKALCRFCGLQVSTNQLSAHIAKEHPRPSRADMTPTLI
Ga0068866_107352272	3300005718	Miscanthus Rhizosphere	MLLGMQRVHISPGKALYRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKNAAVKKRPSK*
Ga0068861_1019592881	3300005719	Switchgrass Rhizosphere	MQRVHISPGKALCRFCGDQISTYSLSTHIAKVHRRPTRADLSPQLVR
Ga0068860_1027746732	3300005843	Switchgrass Rhizosphere	MQSVQFSAGTALCRFCGETVSTNRLSTHIAKEHPRPGPIDMSPTLVPRRGPKVRTAK*
Ga0066652_1010266842	3300006046	Soil	MQRHHIPPGKALCRFCGEQIPTNSLSTHIAKKHRRPTRDMSPSLVNRNRTAPKKRT*
Ga0075026_1002831982	3300006057	Watersheds	MQRVYISAGKALCRYCGEQIATNSLSKHIAKDHQRPGRDMSPTLVPKRVAVKRSPSK*
Ga0075428_1021588562	3300006844	Populus Rhizosphere	MQRVHIPPGKALCRSCGVHVPVNQLSTHIAKEHPRPARADMTPTLVRK
Ga0075420_1000007092	3300006853	Populus Rhizosphere	MLFVSAALHISPGMALCRFCGERVATNRLSTHIAKEHPRAGRIDMSPTLVRKRAAAKKRSSG*
Ga0073934_106120322	3300006865	Hot Spring Sediment	MQSVYLSTGKTLCRFCGESVTVNQLSVHIAKQHPRPVRTDMSPTLVLRKRGESKTLPTT*
Ga0079217_104775881	3300006876	Agricultural Soil	GRVGMLLLVQRVHISPGKALCRFCGEQVATNRLSTHIARKHPRPGRGNMSRTLVRKPAAARKRAAK*
Ga0079215_100296352	3300006894	Agricultural Soil	MLLLVQRVHISPGKALCRFCGEQVATNRLSTHIARKHPRPGRVNMSPTLVRKPAAARKRAAK*
Ga0079215_102290021	3300006894	Agricultural Soil	MQRHHISAGKALCRFCGERIPTNRLSTHIAKEHARPGPANMAPTLVRKRAAPKKRLAK*
Ga0079215_115985402	3300006894	Agricultural Soil	MQRVHIGTGKALCRFCGEQISTNQLSVHIAKEHPRKRTDLSPTLVPKKGGSRRP*
Ga0079216_114158332	3300006918	Agricultural Soil	QRVHFSAGKALCRFCGEMVATNRLSTHIAKEHPRPGQIDTSPKLVPKRPKRPLPAKRPR*
Ga0074063_119138722	3300006953	Soil	VQNVYISPGKALCRFCGEQVAMNGLSTHIARKHARPKQKNTSPKLVRKHAAPKAPAT*
Ga0079218_107950834	3300007004	Agricultural Soil	MLLGMQRVHLSPGKALCRFCGERATNRLSTHIAREHPRPNRIDMSPTFVRKGAAA
Ga0079218_114285542	3300007004	Agricultural Soil	MLLGMQRVHISPGKALCRFCGKRVPTNRLSTHIAQEHPRPGRIDMSPTLVRKRAAVKKPPSK*
Ga0075435_1002751681	3300007076	Populus Rhizosphere	MQRVHVSAGKALCRFCGKELPTNRLSTHIAKEHPRPRRLDMSPTLV
Ga0105106_106725162	3300009078	Freshwater Sediment	MLEGMQRVHLSPGKALCRFCGTQVSTNQLSTHIAREHPRPKLIDERPVLVRKVKSTTRTSR*
Ga0105107_111524262	3300009087	Freshwater Sediment	MLEGMQRVHLSPGKALCRFCGTQVSTNQLSTHIAREHPRPKLIDERPVLVRKV
Ga0111539_103803003	3300009094	Populus Rhizosphere	MLLGVQRVHISPGKALCRFCGKQVATNRLSTHIAQEHPRPRRIDMSPTLVQKRAVKKPPSKQKATSGPGSSERE*
Ga0105247_109614022	3300009101	Switchgrass Rhizosphere	MLVGMQRVQFSAGKALCRFCGEQVSTNRLSIHIAKEHPRSVRIDMSPTLVPKRATAKNPSSK*
Ga0114129_128915782	3300009147	Populus Rhizosphere	MQRVHISPGTALCRFCGEQISTYSLSTHIAKVHRRSVRTNLAPTLVR
Ga0111538_124353522	3300009156	Populus Rhizosphere	MQRHHISPGKALCRFCGEQIPTNSLSTHIAKQHPRPTRDMSPALVKRAPAKKRT*
Ga0075423_130703571	3300009162	Populus Rhizosphere	MQNVYISPGKALCRFCGEQIAMNGLSTHIAKKHARPKQKNTSPKLVRKHAVPKAHAK*
Ga0105242_117542872	3300009176	Miscanthus Rhizosphere	VQNVYISPGKALCRFCGEQVAMNGLSTHIAKNNARPKRKNTSPKLVRKPAVPKAPAK*
Ga0105242_119810722	3300009176	Miscanthus Rhizosphere	MYFSPGKALCRFCGEQIPMNTLSTHIASKHPRPARTDTAPVLVRKRVASTTSRAK*
Ga0103858_100956361	3300009239	River Water	MLLGMQSVHVSAGKARCRFCGEQFSVNRLSTHIAKEHARPRQDMRPTLVRRDAGATKRQD
Ga0105249_120607202	3300009553	Switchgrass Rhizosphere	MQRVYVSAGKAICRFCGETVSTNNLSIHIAQKHPRPGRGSMAPTLVRTRPDAKKRPST*
Ga0134109_100485512	3300010320	Grasslands Soil	MQRVHISAGKALCRFCGEQIAMNRLSTHIAKEHPRPGQIDMSPRLVRGRAAANERLSNPQTRGRHR*
Ga0134086_103303582	3300010323	Grasslands Soil	CDRPLMLVPMQRVYISAGKALCRFCGERVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAATERPSNPQTRGRHR*
Ga0134111_105107152	3300010329	Grasslands Soil	MLVPMQRVYISAGKALCRFCGERVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAATERPSNPQT
Ga0116237_113411872	3300010356	Anaerobic Digestor Sludge	MQSFHVSAGKATCRVCGVEVSTNRLSTHIAREHPRPAPIDLTPTLVRRKTAPRPARPTK*
Ga0126377_132233562	3300010362	Tropical Forest Soil	MQRVQFSAGKALCRFCGEYVATNRLSIHIAKEHPRPGPIDRSPTLVRKQATAAKGSAT*
Ga0105239_131001861	3300010375	Corn Rhizosphere	MLVGMQRVQFSAGKALCRFCGEQVSTNRLSIHIAKEHPRSPRIDMSPTLVPKRATAKNPSSK*
Ga0137424_10023042	3300011412	Soil	MLLGMQRVHISPGKALCRFCGEQVATNRLSTHIAQEHPRPGQIDMSPTLVRKNAAVKKRPSK*
Ga0137427_1000006226	3300011445	Soil	MQRVHFSPGKALCRFCGDLISTNSLSTHIAKVHRRPSRTDLSPQLVRRPKVPATRT*
Ga0136625_10644662	3300012091	Polar Desert Sand	MQRVHVSPGKALCRFCGEQVPTNRLSTHIAKAHPRPGKTDMSPTLVRKGAAAKKRP*
Ga0137383_108197292	3300012199	Vadose Zone Soil	MLVPMQHVYFSAGKALCRFCGEHVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAANERLSNPQTRGRHR*
Ga0137365_103418172	3300012201	Vadose Zone Soil	MLVPMQRVYISAGKALCRFCGEHVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAANERLSNPQTRGRHR*
Ga0137380_113340521	3300012206	Vadose Zone Soil	MLVPMQRVYTSAGKALCRFCGEHVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAATNERLSNPQTRGRHR*
Ga0137376_116586901	3300012208	Vadose Zone Soil	MLVPMQRVYFSTGKALCRFCGEHVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAGNERLSNPQTRGR
Ga0137377_100723837	3300012211	Vadose Zone Soil	MLVPMQRVYFSAGKALCRFCGERVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAANERLSNPQ
Ga0137366_101519213	3300012354	Vadose Zone Soil	MLVPMQRVYISAGKALCRFCGERVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAANERLSNPQTRGRHR*
Ga0137368_104926322	3300012358	Vadose Zone Soil	MQHVYMSAGKALCRFCGEQVSTNRLSVHIAKEHPRAVRTDMSPTLVPKRPAAKKRPSE*
Ga0137361_106880882	3300012362	Vadose Zone Soil	MLVPMQRVYFSAGKALCRFCGEHVSTNLLSTHIAKEHPRPEQIDMSPRLVRGRAAANERLSNPQTRGRHR*
Ga0136637_10758613	3300012526	Polar Desert Sand	MQRVHVSPGNALCRFCGEQVPTNRLSTHIAKAHPRPGKTDMSPTLVRKGAAAKKRP*
Ga0137373_104199491	3300012532	Vadose Zone Soil	QHVYMSAGKALCRFCGEKVSTNRLSVHIAKEHPRPERTDMSPTLVPKRLAAKKRPSE*
Ga0157310_103407172	3300012916	Soil	SPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKIAAVKKRPSK*
Ga0164307_101584032	3300012987	Soil	VQNVYISPGKALCRFCGEQVAMNGLSTHIAKKHARPKRKNTSPKLVRKHAAPKAPAK*
Ga0163162_115065721	3300013306	Switchgrass Rhizosphere	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGRIDMSPALVRKNAAVKKRPSK*
Ga0157375_107764271	3300013308	Miscanthus Rhizosphere	RANREPLMLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPTRIDMSPTLVRKNAAVKKRPSK*
Ga0075327_12410641	3300014272	Natural And Restored Wetlands	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKGGAVKKRPSK
Ga0163163_1000000886	3300014325	Switchgrass Rhizosphere	VQNVYISPGKALCRFCGEQVAMNGLSTHIAKNHARPKRKNTSPKLVRKPAAPKATAK*
Ga0163163_110481683	3300014325	Switchgrass Rhizosphere	GMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGRIDMSPTLVRKNAAVKKRPSK*
Ga0157380_112104622	3300014326	Switchgrass Rhizosphere	VQRVHISPGKALCRFCGEQIATNSLSTHIAREHPRPPRRDLSPQLMKKRSSGSTKQ
Ga0132257_1020412882	3300015373	Arabidopsis Rhizosphere	MLLGVQRVHISPGKALCRFCGKQVATNRLSTHIAQEHPRPRRIDMSPTLVQKRAVKKPPSKQKATSGPGSSER*
Ga0132255_1025685262	3300015374	Arabidopsis Rhizosphere	MLLGVQRVHISPGKALCRFCGKQVPTNRLSTHIAQEHPRPRRIDMSPTLVQKRAVKKPPSKQKATSGPGSSER*
Ga0134069_10469173	3300017654	Grasslands Soil	MLVPMQRVYISAGKALCRFCGEHVSTNRLSTHIAKEHPRPEQIDMSPRLVRGRAAANERLSNPQTRGRHR
Ga0190266_106536771	3300017965	Soil	MQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGQIDMSPTLVRKPAAAKKRALKPR
Ga0184616_104155792	3300018055	Groundwater Sediment	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRLDMSPTLVRKNAAVKKRPSK
Ga0184611_10389912	3300018067	Groundwater Sediment	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKNAAVKKRPSK
Ga0184609_100956382	3300018076	Groundwater Sediment	MLVLMQHVHISVGKALCRFCGEHIATNRLSTHIAKEHPRPEQIDMSPRLVRGRAAAIERPSNPQARGRRR
Ga0184625_103453422	3300018081	Groundwater Sediment	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKNAAVK
Ga0184628_100873124	3300018083	Groundwater Sediment	ILLLVQRVHISPGKALCRFCGEQVATNRLSTHIAGKHPRPGRVDMSPTLVRKPAAAKKRALKPRQ
Ga0190265_110827492	3300018422	Soil	MQRVHIGTGKALCRFCGEQISTNQLSVHIAKEHPRKRTDMSPTLVPKKGGSTKPRPSK
Ga0190272_109990682	3300018429	Soil	MQSVYLSAGKALCRFCGDQVATNQLSVHIAKEHPRPKPIDMSPTLVTRKAAKK
Ga0190270_100799812	3300018469	Soil	MLLGMQRVHISPGKALCRFCGEQVATNRLSTHIAQEHPRPGQIDMSPTLVRKNAAVKKRPSK
Ga0190274_104428403	3300018476	Soil	MQSVYLSAGKAICRFCGDQVATNQLSVHIAKEHPRPKPIDMAPTLVPRKAAKK
Ga0190274_114198642	3300018476	Soil	MQRVYLSSGKALCRFCGEQVSTNQLSVHIARQHPRPIRGDMAPTLVLTKRKK
Ga0190274_127610742	3300018476	Soil	MQRVYLSSGKALCRFCGEQVSTNQLSVHIAREHPRPTRSDMSPTLVLRKRATAARSPE
Ga0187894_101106932	3300019360	Microbial Mat On Rocks	MQRVYLSAGKALCRFCGEQVSTNHLSIHIAKAHPRPRRIDMSPTLVPRKGAAKTTRSSK
Ga0194131_100060384	3300020193	Freshwater Lake	MLLAMQRVYISPGKALCRFCGEQVATNRLSTHIALKHPRPGRIDMTPTLVRKRAAAKRRPSK
Ga0196978_10993931	3300021067	Soil	MQQINFSAGKALCRFCGEHVSTNRLSNHIAKEHPRPAAISLSPALVRKRIDSDKEAAK
Ga0247798_10562282	3300023260	Soil	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRK
Ga0207710_101657411	3300025900	Switchgrass Rhizosphere	MQSVQFSAGKALCRFCGEQVSTNHLSIHIAKEHPRPERTDMSPTLVRKQAPAKKQPTSAT
Ga0207710_104548702	3300025900	Switchgrass Rhizosphere	MLVGMQRVQFSAGKALCRFCGEQVSTNRLSIHIAKEHPRSVRIDMSPTLVPKRATAKNPSSK
Ga0207681_100626633	3300025923	Switchgrass Rhizosphere	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGRIDMSPTLVRKNAAVKKRPSK
Ga0207650_106395411	3300025925	Switchgrass Rhizosphere	MLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPSRIDMSPTLVRKIAAVKKRPSK
Ga0207658_110244712	3300025986	Switchgrass Rhizosphere	MQSVQFSAGTALCRFCGETVSTNRLSTHIAKEHPRPGPIDMSPTLVPRRGPKV
Ga0209060_100508302	3300027826	Surface Soil	MQTLHISPGSALCRFCGETVSTNSLSKHIAAKHPRPRKKSLAPTLVRKPKAAPPTR
Ga0209486_100879112	3300027886	Agricultural Soil	MLLLVQRVHISPGKALCRFCGEQVATNRLSTHIARKHPRPGRVNMSPTLVRKPAAARKRAAK
Ga0209382_103813301	3300027909	Populus Rhizosphere	VPPRLTSGKEPLMLFVSAALHISPGMALCRFCGERVATNRLSTHIAKEHPRAGRIDMSPTLVRKRAAAKKRSSG
Ga0247825_101410372	3300028812	Soil	MQRINLSAGKAQCRFCGEHIAINRLSIHIAKEHPRPAAISLSPVLVRKRVDVAESAK
Ga0247827_104597083	3300028889	Soil	MLLAVQRVHISPGKALCRFCGEQVATNRLSTHIARNHPRPGRADMAPTLVRTPAGAKKRASKQR
Ga0311360_110799611	3300030339	Bog	MQRVHVSAGKAVCRFCGTQVFTNRLSNHIAKEHPRPGPTSTAPTLVR
Ga0299914_100050485	3300031228	Soil	MQRVRISPGKALCRFCGAQVSTNRLSTHIAKEHPRPGPTDMSPTLVRKRAATKKPASKKPAEP
Ga0299914_106796402	3300031228	Soil	MQRVQLSPGMALCRFCGEQVSTNRLSTLIAKEHSRLARSDMSATLVKKRAGARK
Ga0310813_104621782	3300031716	Soil	VQNVYISPGKALCRFCGEQVAMNGLSTHIAKNHARPKRKNTSPKLVRKPAAPKATAK
Ga0310907_104029481	3300031847	Soil	PLMLLGMQRVHISPGKALCRFCGERVATNRLSTHIAQEHPRPGRIDMSPTLVRKNAAVKKRPSK
Ga0310900_111179741	3300031908	Soil	MQRVHIPPGKALCRSCGVHVPVNQLSTHIAKEHPRPARADMTPTLVRKRRA
Ga0326597_109543771	3300031965	Soil	SPGKALCRFCGEQISMNRLSTHIAKVHRRPTRDMSPALVRGRARGKTRETK
Ga0307416_1005656901	3300032002	Rhizosphere	VHISPGKALCRFCGEQISQNRLSIHIAKEHPRPGRADMKPTLVPKKRSSGSSSRQK
Ga0310890_105093662	3300032075	Soil	MQRVHIPPGKALCRFCGLQVAMNNLSTHIAKEHPRPARADMTPTLVRKRRAPKKPSRP
Ga0310890_118092011	3300032075	Soil	VQRVHISPGKALCRFCGEQIATNSLSTHIAREHPRPPRRDLSPQLMKKRSSGSTKQER
Ga0315912_101414242	3300032157	Soil	MQRVHISPGKALCRYCGLQVGMNDLSSHIARQHPKPVRADMTPTLVRKLKTAKKPTPDEP
Ga0316628_1008252502	3300033513	Soil	MQQFHISAGKTLCRFCGEKVSTNRLSTHIATAHPRPKRVDMRPTLVRKHEPKKRQPT
Ga0370499_0134951_41_214	3300034194	Untreated Peat Soil	MQRVHLSPGKALCRFCGEQIPTNSLSTHIAKEHRRPDTDMSPTLVQRRPPARTLTSK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072861

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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