NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F072844

Metagenome Family F072844

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072844
Family Type Metagenome
Number of Sequences 121
Average Sequence Length 46 residues
Representative Sequence MSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENV
Number of Associated Samples 85
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 61.98 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 96.69 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (93.388 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(33.884 % of family members)
Environment Ontology (ENVO) Unclassified
(87.603 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.041 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.00%    β-sheet: 0.00%    Coil/Unstructured: 52.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF02195ParBc 1.65
PF00476DNA_pol_A 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 0.83


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A93.39 %
All OrganismsrootAll Organisms6.61 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10077544Not Available1327Open in IMG/M
3300000116|DelMOSpr2010_c10125378Not Available919Open in IMG/M
3300000117|DelMOWin2010_c10179707Not Available669Open in IMG/M
3300001450|JGI24006J15134_10068335Not Available1373Open in IMG/M
3300001460|JGI24003J15210_10045265Not Available1498Open in IMG/M
3300001460|JGI24003J15210_10103237Not Available811Open in IMG/M
3300001472|JGI24004J15324_10160248Not Available511Open in IMG/M
3300001853|JGI24524J20080_1027187Not Available561Open in IMG/M
3300006025|Ga0075474_10084781Not Available1035Open in IMG/M
3300006029|Ga0075466_1196299Not Available501Open in IMG/M
3300006735|Ga0098038_1180285Not Available691Open in IMG/M
3300006735|Ga0098038_1209375Not Available628Open in IMG/M
3300006737|Ga0098037_1229499Not Available600Open in IMG/M
3300006737|Ga0098037_1285064Not Available524Open in IMG/M
3300006749|Ga0098042_1039058Not Available1318Open in IMG/M
3300006749|Ga0098042_1147591Not Available577Open in IMG/M
3300006749|Ga0098042_1159785Not Available549Open in IMG/M
3300006751|Ga0098040_1102012Not Available864Open in IMG/M
3300006802|Ga0070749_10514879Not Available651Open in IMG/M
3300006802|Ga0070749_10708580Not Available538Open in IMG/M
3300006810|Ga0070754_10477437Not Available538Open in IMG/M
3300006920|Ga0070748_1348946Not Available522Open in IMG/M
3300006920|Ga0070748_1364017Not Available508Open in IMG/M
3300006923|Ga0098053_1021687All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1394Open in IMG/M
3300006923|Ga0098053_1065489All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium741Open in IMG/M
3300006928|Ga0098041_1029520Not Available1787Open in IMG/M
3300006929|Ga0098036_1030164All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1703Open in IMG/M
3300006929|Ga0098036_1119147Not Available809Open in IMG/M
3300007229|Ga0075468_10152617Not Available698Open in IMG/M
3300007229|Ga0075468_10193759Not Available596Open in IMG/M
3300007234|Ga0075460_10200835Not Available678Open in IMG/M
3300007234|Ga0075460_10231220Not Available621Open in IMG/M
3300007234|Ga0075460_10298085Not Available529Open in IMG/M
3300007236|Ga0075463_10291175Not Available524Open in IMG/M
3300007276|Ga0070747_1032824Not Available2051Open in IMG/M
3300007276|Ga0070747_1199392Not Available706Open in IMG/M
3300007344|Ga0070745_1211071Not Available714Open in IMG/M
3300007344|Ga0070745_1362645Not Available506Open in IMG/M
3300007345|Ga0070752_1135021Not Available1025Open in IMG/M
3300007345|Ga0070752_1161576Not Available914Open in IMG/M
3300007345|Ga0070752_1285283Not Available633Open in IMG/M
3300007363|Ga0075458_10056658Not Available1231Open in IMG/M
3300007640|Ga0070751_1161655Not Available890Open in IMG/M
3300007963|Ga0110931_1129837Not Available758Open in IMG/M
3300007963|Ga0110931_1141078Not Available724Open in IMG/M
3300009027|Ga0102957_1222890Not Available679Open in IMG/M
3300009074|Ga0115549_1153288Not Available748Open in IMG/M
3300009481|Ga0114932_10182965Not Available1279Open in IMG/M
3300009529|Ga0114919_10400118Not Available955Open in IMG/M
3300009603|Ga0114911_1041154Not Available1465Open in IMG/M
3300009604|Ga0114901_1098722Not Available924Open in IMG/M
3300009604|Ga0114901_1166735Not Available654Open in IMG/M
3300010148|Ga0098043_1121540Not Available752Open in IMG/M
3300010148|Ga0098043_1164315All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.624Open in IMG/M
3300010148|Ga0098043_1208649Not Available539Open in IMG/M
3300010148|Ga0098043_1218734Not Available523Open in IMG/M
3300010150|Ga0098056_1198410All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.670Open in IMG/M
3300010153|Ga0098059_1215981Not Available744Open in IMG/M
3300010368|Ga0129324_10154639Not Available953Open in IMG/M
3300010368|Ga0129324_10269578Not Available675Open in IMG/M
3300012920|Ga0160423_10047491All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium3128Open in IMG/M
3300012920|Ga0160423_10528496Not Available801Open in IMG/M
3300012920|Ga0160423_10534237Not Available796Open in IMG/M
3300012920|Ga0160423_10627456Not Available727Open in IMG/M
3300012920|Ga0160423_10963268Not Available572Open in IMG/M
3300012920|Ga0160423_11111086Not Available528Open in IMG/M
3300012953|Ga0163179_11033817Not Available718Open in IMG/M
3300017697|Ga0180120_10205147Not Available815Open in IMG/M
3300017697|Ga0180120_10345827Not Available589Open in IMG/M
3300017708|Ga0181369_1118773Not Available538Open in IMG/M
3300017717|Ga0181404_1119054Not Available644Open in IMG/M
3300017720|Ga0181383_1175568Not Available572Open in IMG/M
3300017721|Ga0181373_1097089Not Available520Open in IMG/M
3300017725|Ga0181398_1139109Not Available577Open in IMG/M
3300017734|Ga0187222_1111574Not Available616Open in IMG/M
3300017734|Ga0187222_1129323Not Available565Open in IMG/M
3300017741|Ga0181421_1050267Not Available1109Open in IMG/M
3300017744|Ga0181397_1158033Not Available577Open in IMG/M
3300017750|Ga0181405_1154941Not Available565Open in IMG/M
3300017753|Ga0181407_1085847Not Available800Open in IMG/M
3300017767|Ga0181406_1124538Not Available777Open in IMG/M
3300017769|Ga0187221_1085488Not Available975Open in IMG/M
3300017776|Ga0181394_1189946Not Available628Open in IMG/M
3300017986|Ga0181569_10640348Not Available708Open in IMG/M
3300021347|Ga0213862_10351960Not Available525Open in IMG/M
3300021356|Ga0213858_10456255Not Available595Open in IMG/M
3300021373|Ga0213865_10365264Not Available651Open in IMG/M
3300021375|Ga0213869_10320313Not Available656Open in IMG/M
3300021958|Ga0222718_10439264Not Available643Open in IMG/M
3300021960|Ga0222715_10559004Not Available597Open in IMG/M
3300021960|Ga0222715_10680483Not Available520Open in IMG/M
3300021964|Ga0222719_10268549Not Available1123Open in IMG/M
3300022065|Ga0212024_1045249Not Available767Open in IMG/M
3300022071|Ga0212028_1084958Not Available591Open in IMG/M
3300024344|Ga0209992_10393110Not Available549Open in IMG/M
3300024433|Ga0209986_10265541Not Available826Open in IMG/M
3300025102|Ga0208666_1093995Not Available749Open in IMG/M
3300025102|Ga0208666_1125223Not Available603Open in IMG/M
3300025103|Ga0208013_1169800Not Available510Open in IMG/M
3300025110|Ga0208158_1005399All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium3692Open in IMG/M
3300025110|Ga0208158_1039860Not Available1178Open in IMG/M
3300025120|Ga0209535_1065861Not Available1450Open in IMG/M
3300025120|Ga0209535_1202096Not Available557Open in IMG/M
3300025127|Ga0209348_1220839Not Available518Open in IMG/M
3300025128|Ga0208919_1009921Not Available3935Open in IMG/M
3300025138|Ga0209634_1063759Not Available1761Open in IMG/M
3300025151|Ga0209645_1221808Not Available544Open in IMG/M
3300025151|Ga0209645_1224007Not Available540Open in IMG/M
3300025168|Ga0209337_1083564Not Available1538Open in IMG/M
3300025543|Ga0208303_1126089Not Available510Open in IMG/M
3300025652|Ga0208134_1092507Not Available851Open in IMG/M
3300025671|Ga0208898_1163937Not Available583Open in IMG/M
3300025759|Ga0208899_1096248Not Available1115Open in IMG/M
3300025759|Ga0208899_1207621Not Available617Open in IMG/M
3300025769|Ga0208767_1174790Not Available751Open in IMG/M
3300025806|Ga0208545_1053221All Organisms → Viruses → Predicted Viral1191Open in IMG/M
3300025818|Ga0208542_1101804Not Available826Open in IMG/M
3300025889|Ga0208644_1207805Not Available844Open in IMG/M
3300028022|Ga0256382_1155631Not Available548Open in IMG/M
3300029319|Ga0183748_1076952Not Available836Open in IMG/M
3300034374|Ga0348335_192918Not Available503Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine33.88%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous28.10%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater9.92%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater4.96%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.31%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.31%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.31%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.48%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.48%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.65%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.65%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.83%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.83%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.83%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.83%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.83%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001853Marine viral communities from the Subarctic Pacific Ocean - LP-49EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024433Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1007754463300000116MarineMSDQEILKQRDLLDAILASRTTSQYERLESMKVMD
DelMOSpr2010_1012537813300000116MarineMSDQEILKQRDLLDAILASRTTGQYERLESMKVMDSIYFREKLPENVVLFP
DelMOWin2010_1017970713300000117MarineMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIY
JGI24006J15134_1006833513300001450MarineMSDQEILKQRDLLDTLLASRNMEQYERIESMKVMDSIYFKENLPEN
JGI24003J15210_1004526563300001460MarineMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQNLP
JGI24003J15210_1010323733300001460MarineMSDQEILKQRDLLDTLLASRNTEQYERIESMKVMDSIYFKENL
JGI24004J15324_1016024813300001472MarineMLMSDQEILKQRELLDTLLATRTSQYERVKSIKVMDSIYFKKKLPKNVILFPLQRIK
JGI24524J20080_102718713300001853MarineMSDKEILKQRELLDTLLATRTSQYERVKSIKVMDSIYFKK
Ga0075474_1008478153300006025AqueousMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMDS
Ga0075466_119629923300006029AqueousMLMSDQEILKQRELLDTLLATRTSQYERVKSIKVMDSIYFKKK
Ga0098038_118028533300006735MarineMLMSDQEILRQRELLDTLLATRTNKYERVKSMKVMDSIYFKKKLPKNVILFPLQRIK
Ga0098038_120937523300006735MarineMSDQEILKQRDLLDAILASRTTNQYDRIENMKVMDSIYFKEKLPK
Ga0098037_122949933300006737MarineMSDQEILKQRDLLDAILASRTTNQYDRLENMKVMDSIYFKE
Ga0098037_128506423300006737MarineMSDQEILKQRDLLDAILASRTTSQYDRIENMKVMDSIYFKEKLP
Ga0098042_103905813300006749MarineMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMD
Ga0098042_114759133300006749MarineMSDQEILKQRDLLDAILASRTTNQYDRLENMKVMDSIYFKEKLPKN
Ga0098042_115978513300006749MarineVLMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMD
Ga0098040_110201233300006751MarineMFMSDQEILKQRELLDTLLATRTSQYERVKSMQAMDSIYFKKKLPKNVILFPLQR
Ga0070749_1051487933300006802AqueousMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMDSIYFREKL
Ga0070749_1070858033300006802AqueousMSDREILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLFPLQ
Ga0070754_1047743733300006810AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLFPLQ
Ga0070748_134894633300006920AqueousVSDQEILKQRELLDTLLATRTSQYERVKSIKVMDSIYFKKK
Ga0070748_136401713300006920AqueousMLMSDQEILKQRELLDTLLATRTSQYERVKSIKVMDSIYF
Ga0098053_102168753300006923MarineMIMSDQEILKQRELLDTLLATRTSQYERVKSMSVMDSIYFRKKLPKNVILFPLQRIK
Ga0098053_106548913300006923MarineMSDQEILKQRDLLDTLLASRTNQFDRIESMKLMDSIY
Ga0098041_102952053300006928MarineMSDQEILKQRDLLDAILASRTTNQYDRLENMKVMDSIYFKEKLPKNVILF
Ga0098036_103016413300006929MarineMLMSDQEILKQRDLLDTLLATRTNKRERIKSIKVMDSIYFKKKLPENVILF
Ga0098036_111914723300006929MarineMSDQEILRQRDLLDTLLAAKNNQYDRIENMKVMDSIYFKKNL
Ga0075468_1015261733300007229AqueousMLMSDQEILKQRELLDTLLATRTSQYERVKSIKVMDSIYFKKKLPKNVIL
Ga0075468_1019375933300007229AqueousMLMSDQEILKQRELLDTLLATRTSQYERVKSIKVMDSIYFKKKLPKNVI
Ga0075460_1020083513300007234AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFREKLPE
Ga0075460_1023122033300007234AqueousMSDREILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLF
Ga0075460_1029808513300007234AqueousMSDQEILKQRDLLDTLLASRNTGQYDRLENMKVMDSIYFREKLPENVVLFPL
Ga0075463_1029117533300007236AqueousMSDQEILKQRDLLDTLLASRNTGQYERLESMKVMDSIYFREKLPEN
Ga0070747_103282413300007276AqueousMLMSDQEILKQRELLDTLLATRTSQYERVKSIKVMDSIYFKKKLPKN
Ga0070747_119939243300007276AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKE
Ga0070745_121107113300007344AqueousMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMDSIYFREKLPKNV
Ga0070745_136264523300007344AqueousMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMDSIYFREKLPENVVLFPLQRIKR
Ga0070752_113502113300007345AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENV
Ga0070752_116157643300007345AqueousMSDQEILKQRDLLDTLLASRTTSQYERLESMKVMDSIYFKENLPENVVLFPL
Ga0070752_128528313300007345AqueousMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMDSIYFREKLPKNVILFPLQR
Ga0075458_1005665853300007363AqueousMSDQEILKQRDLLDAILASRTNQYERIQSMEVMDSIYFRKNLPNNVVLFPLQRIK
Ga0070751_116165533300007640AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFREKLPENVVLFPLQ
Ga0110931_112983713300007963MarineMFMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMDSIYFKENLPENVVLF
Ga0110931_114107813300007963MarineMSNQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQNLP
Ga0102957_122289023300009027Pond WaterMSDREILKQRDLLDTLLASRTTGQYDRLENMKVMDSIYFREKL
Ga0115549_115328813300009074Pelagic MarineMSDQEILKQRDLLDAILASRNTGQYDRLENMKVMDSIYFKEKLPKNVVLFPL
Ga0114932_1018296513300009481Deep SubsurfaceMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQNLPENV
Ga0114919_1040011813300009529Deep SubsurfaceMSDQEILKQRDLLDAILASRHTGQYERLESMKVMDSIYFREKLPENVV
Ga0114911_104115443300009603Deep OceanMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFK
Ga0114901_109872223300009604Deep OceanMLMSDQEILRQRELLDTLLATRTNQYERVKSMKVMDSIYFKKKLPKNVI
Ga0114901_116673513300009604Deep OceanMSAQEILKQRDLLDAILASRTTDQYERIENMKVMDSIY
Ga0098043_112154033300010148MarineMADHQEILRQRDLLDTILASRTNQYDRIENMKIMDSIYFK
Ga0098043_116431533300010148MarineMLMSDQEILRQRDLLDTLLATRTNKRERIKSIKVMDSIYFK
Ga0098043_120864933300010148MarineMSDQEILKQRDLLDAILASRTNQYERIQSMEVMDSIYFRE
Ga0098043_121873413300010148MarineMSDQEILKQRDLLDAILASRTTNQYDRLENMKVMDSIYFKEKLPKNVIL
Ga0098056_119841023300010150MarineMLMSDQEILRQRELLDTLLATRTNKRERIKSIKVMDSIYFKKKLPDNVILFPLQ
Ga0098059_121598123300010153MarineMLMSDQEILRQRDLLDTLLATRTNKRERIKSIKVMDSIYFKKKLP
Ga0129324_1015463943300010368Freshwater To Marine Saline GradientMSDQEILKQRDLLDAILASRNTGQYERLESMKVMDSIYFREKL
Ga0129324_1026957823300010368Freshwater To Marine Saline GradientMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQNLPENVVLFPLQR
Ga0160423_1004749113300012920Surface SeawaterMNHEEILKQRDLLDTILASRTNQLDRIENMKIMDSIYFKKNLPENV
Ga0160423_1052849613300012920Surface SeawaterVNHEEILKQRDLLDTILASRTNQLDRIENMKIMDSIYFKKN
Ga0160423_1053423733300012920Surface SeawaterMNHEEILKQRDLLDTILASRTNQLDRIENMKIMDSIY
Ga0160423_1062745613300012920Surface SeawaterMKHEEILKQRDLLDTILASRTNQYERIKHMQIMDSIYFKKKLPENVVLF
Ga0160423_1096326813300012920Surface SeawaterMDHQEILKQRDLLDAMLASRTNQYEKIECMKVMDSIYFKKKLPDNVVLFPLQRIKR
Ga0160423_1111108613300012920Surface SeawaterMNHEEILKQRDLLDTILASRTNQLDRIENMKIMDSIYFKKN
Ga0163179_1103381713300012953SeawaterMLMSDQEILRQRELLDTLLATRTNKHERIKSIKVMDSIYFKKKLPKNVILFPLQR
Ga0180120_1020514743300017697Freshwater To Marine Saline GradientMSDQEILKQRDLLDTLLASRNTGQYDRLENMKVMDSIYFKEKLPKNVV
Ga0180120_1034582713300017697Freshwater To Marine Saline GradientMSDQEILKQRDLLDTLLASRTTGQYERLESMKVMDSIYFREKLPENVV
Ga0181369_111877323300017708MarineMLMSDQEILRQRELLDTLLATRTNKRERIKSIKVLDSIYFQKKLPDNVILFPLQR
Ga0181404_111905413300017717SeawaterMSDQEILKQRDLLDTLLASRNTEQYERIESMKVMD
Ga0181383_117556823300017720SeawaterMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYF
Ga0181373_109708913300017721MarineMSDQEILKQRDLLDAILASRTTDQYERIESMKVMDSIYFKENLPENVVLFPLQR
Ga0181398_113910913300017725SeawaterMFMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPE
Ga0187222_111157433300017734SeawaterMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQNLPENVVLFPLQRIK
Ga0187222_112932313300017734SeawaterMDHQEILKQRDLLDTILASRTNQFERIKNMEIMDSIYFKKKLPENV
Ga0181421_105026713300017741SeawaterVSDQEILKQRDLLDAILASRNTGQYDRLENMKVMDSIYFKEKLP
Ga0181397_115803323300017744SeawaterMFMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLFPLQR
Ga0181405_115494123300017750SeawaterMFMSDQEILKQRDLLDAILASRTTSQYDRLEKMKVMDSIYFKENLPENVVLFPLQ
Ga0181407_108584743300017753SeawaterMSDQEILKQRDLLDTLLASRTTDQYERIENMKVMDSI
Ga0181406_112453833300017767SeawaterMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQNLPK
Ga0187221_108548823300017769SeawaterMLMSDQEILRQRELLDTLLATRTNKYERVKSMKVMDS
Ga0181394_118994623300017776SeawaterMLMSDQEILKQRELLDTLLATRTNKYERVKSMKVMDSIYFKKKLP
Ga0181569_1064034813300017986Salt MarshMSDQEILKQRDLLDAILASRTSQYERIQSMEVMDSI
Ga0213862_1035196013300021347SeawaterMSDQEILKQRDLLDAILASRTNQYERIRSMQVMDSIYFKENLPDNVVLFPLQRIK
Ga0213858_1045625513300021356SeawaterMSDQEILKQRDLLDAILASRTSQYDRLENMRVMDSIYFKEKLPENVVLFPLQR
Ga0213865_1036526423300021373SeawaterMSDQEILKQRDLLDAILASRTTGQYERIESMKVMDSIYFREKLPKN
Ga0213869_1032031313300021375SeawaterMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLFPLQRIK
Ga0222718_1043926413300021958Estuarine WaterMSDKEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLFPLQR
Ga0222715_1055900413300021960Estuarine WaterMSDQEILKQRDLLDAILASRTTGQYDRLENMKVMDSIYFREKLPKNVILFP
Ga0222715_1068048313300021960Estuarine WaterMSDREILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPE
Ga0222719_1026854913300021964Estuarine WaterMSDQEILKQRDLLDAILASRNTDQYERIENMKVMDSIYFKEK
Ga0212024_104524913300022065AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPE
Ga0212028_108495833300022071AqueousMSDQEILKQRDLLDAILASRNTGQYERLESMKVMDSIYFREKLPENVVLF
Ga0209992_1039311013300024344Deep SubsurfaceMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQNLPEN
Ga0209986_1026554113300024433Deep SubsurfaceMSDQEILKQRDLLDAILASRNTGQYERLESMKVMDSIYFREKLPEN
Ga0208666_109399533300025102MarineMSDQEILRQRDLLDTLLAAKNNQYDRIENMKVMDSIYFKKNLPENV
Ga0208666_112522323300025102MarineMSDQEILKQRDLLDAILASRTNQYERVESMKVMDSIYFKENLPENVVLFPL
Ga0208013_116980013300025103MarineVSDQEILRQRDLLDTLLASRTNQFDRIESMKLMDSIYFKKNLPKN
Ga0208158_100539913300025110MarineMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKKNL
Ga0208158_103986013300025110MarineVLMSDQEILKQRDLLDAILASRTTSDYDRLENMKVMDSIYFKENLP
Ga0209535_106586113300025120MarineMSDQEILKQRDLLDTLLASRNTEQYERIESMKVMDSIYFKENLPENV
Ga0209535_120209633300025120MarineVSDKEILKQRELLDTLLAARTSQYERVKSIKVMDSIYFKKKLPKN
Ga0209348_122083913300025127MarineMKHEEILKQRDLLDTLLASRLGQYDRIKNMQIMDSIYFKKKLPKNVVLFPLQ
Ga0208919_1009921123300025128MarineMSDQEILKQRDLLDAILASRTTDQYERIENMKVMDSIYFKQN
Ga0209634_106375913300025138MarineMSDQEILKQRDLLDTLLASRNMEQYERIESMKVMDSIYFKEN
Ga0209645_122180813300025151MarineMSDQEILKQRDLLDAILASRTNQYERIKSMEVMDSIYF
Ga0209645_122400723300025151MarineMMSDQEILKQRDLLDAILASRTNQYERIKSMEVMDSIYFKE
Ga0209337_108356413300025168MarineMSDQEILKQRDLLDTLLASRNMEQYERIESMKVMDSIYFKENLPENVVLFPLQR
Ga0208303_112608923300025543AqueousMFMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKEN
Ga0208134_109250733300025652AqueousMSDQEILKQRDLLDTLLASRNTGQYDRLENMKVMDSIYFKEK
Ga0208898_116393723300025671AqueousMSDQEILKQRDLLDAILASRTTSQYDRLENMKVMDSIYFREKLP
Ga0208899_109624853300025759AqueousMSDREILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLFPLQR
Ga0208899_120762113300025759AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFREK
Ga0208767_117479033300025769AqueousMSDQEILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVVLFPLQR
Ga0208545_105322153300025806AqueousMSDQEILKQRDLLDTLLASRTTNQYERLESMKVMDSIYFREKLPENVVLFPLQRIK
Ga0208542_110180443300025818AqueousMSDQEILKQRDLLDAILASRTTGQYERLESMKVMDSIYFREKLPENVV
Ga0208644_120780543300025889AqueousMSDQEILKQRDLLDTLLASRTTGQYERLESMKVMDSIYFREKLPENVVLFPL
Ga0256382_115563123300028022SeawaterMSHDEILKQRDLLDTILASRTNQYDKIQNIELMDSIYFKKNLPENVVLFPLQ
Ga0183748_107695233300029319MarineMNHEEILKQRDLLDTILASRTNQFERIENMKIMDS
Ga0348335_192918_359_5023300034374AqueousMSDREILKQRDLLDAILASRTTSQYERLESMKVMDSIYFKENLPENVV


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