NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F072816

Metagenome / Metatranscriptome Family F072816

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072816
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 78 residues
Representative Sequence MTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLTL
Number of Associated Samples 104
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 28.10 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 90.91 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.314 % of family members)
Environment Ontology (ENVO) Unclassified
(42.975 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(61.157 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126
1JGI12053J15887_106459441
2Ga0062385_101077653
3Ga0066388_1023716221
4Ga0070733_106249181
5Ga0066701_108654411
6Ga0066708_103884691
7Ga0070762_100047701
8Ga0070762_105044761
9Ga0070763_108783342
10Ga0070764_110300841
11Ga0066651_103076651
12Ga0075028_1004577791
13Ga0075029_1012120912
14Ga0075019_103612282
15Ga0099830_109813592
16Ga0126382_105779711
17Ga0126382_122293271
18Ga0126373_112124211
19Ga0126373_132469692
20Ga0126376_107835983
21Ga0126372_125154541
22Ga0126381_1010868093
23Ga0126383_130144271
24Ga0137389_117388512
25Ga0137363_108643222
26Ga0137362_112807311
27Ga0137360_115009142
28Ga0137394_101338045
29Ga0137413_109063411
30Ga0137404_104380493
31Ga0137404_107691821
32Ga0137407_101999721
33Ga0153915_110737563
34Ga0153915_134248392
35Ga0153916_108559531
36Ga0181539_10455071
37Ga0137405_10301591
38Ga0137420_12672271
39Ga0182036_109249132
40Ga0182041_114980122
41Ga0182033_104587363
42Ga0187802_104300281
43Ga0187780_100458641
44Ga0187816_102143031
45Ga0187766_101810921
46Ga0187765_103197512
47Ga0187772_106695682
48Ga0066669_100098976
49Ga0210403_111313502
50Ga0210401_105679091
51Ga0210406_103560683
52Ga0210400_115005971
53Ga0210388_112495961
54Ga0210393_102694253
55Ga0210393_113837442
56Ga0210385_112521182
57Ga0210397_101679263
58Ga0210387_102960503
59Ga0210383_116551662
60Ga0210394_100297106
61Ga0210384_111669861
62Ga0210392_104387203
63Ga0210392_106811501
64Ga0210398_101326471
65Ga0210398_104103423
66Ga0210402_107346693
67Ga0210402_110407012
68Ga0210410_105160393
69Ga0210409_113959201
70Ga0242662_102013091
71Ga0242672_10411382
72Ga0242654_102487511
73Ga0224516_10492921
74Ga0247694_10272542
75Ga0137417_11702731
76Ga0209378_10947373
77Ga0207781_10067893
78Ga0207779_10200721
79Ga0208097_10311712
80Ga0209735_10004229
81Ga0209422_10487333
82Ga0209625_10647792
83Ga0209177_101478201
84Ga0209656_102174403
85Ga0209656_104122311
86Ga0209580_104407112
87Ga0209274_101232041
88Ga0209517_101768301
89Ga0209167_105276003
90Ga0209465_100432781
91Ga0209275_101600841
92Ga0265354_10024811
93Ga0308309_104100461
94Ga0311369_108646412
95Ga0311357_113244291
96Ga0170834_1025258931
97Ga0170834_1101378751
98Ga0170822_157060141
99Ga0302307_105322391
100Ga0318528_106632101
101Ga0310686_1068882061
102Ga0307476_108137351
103Ga0307476_111383731
104Ga0307474_110742381
105Ga0307474_114003791
106Ga0307469_108291693
107Ga0307469_116317381
108Ga0307475_112460461
109Ga0307475_112727422
110Ga0310910_101178091
111Ga0307471_1019739031
112Ga0307471_1021872591
113Ga0307472_1016653091
114Ga0335085_115964072
115Ga0335080_110636402
116Ga0335069_123729491
117Ga0335071_108766222
118Ga0335071_109076122
119Ga0335084_106480143
120Ga0371488_0108644_3_221
121Ga0326724_0106347_1_201
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 45.63%    β-sheet: 3.88%    Coil/Unstructured: 50.49%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLTLCytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Bog
Freshwater Wetlands
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Surface Soil
Peatlands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Tropical Forest Soil
Forest Soil
Soil
Soil
Palsa
Peat Soil
Rhizosphere
10.7%6.6%3.3%22.3%9.1%5.0%3.3%3.3%4.1%5.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1064594413300001661Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLTLTLAIVLESRARARKEIEVMRHL
Ga0062385_1010776533300004080Bog Forest SoilMTHCLDCGSERTSDQCPNCGLTSAAAELVFRRRLIRQMAFFLLGSLLFPYLSQVYPPLDLDAMLVFFGLVFFAALAIAIFLDRQARNRK
Ga0066388_10237162213300005332Tropical Forest SoilMSHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYLSQIYPPLDIDAMLVFFGLVFFVALALAIVLESRARARKEIE
Ga0070733_1062491813300005541Surface SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYLSQIYPPLDLDGMLVFFGVVFFVALALAIVLESRARARKEIE
Ga0066701_1086544113300005552SoilMTHCLDCGAERITDQCPSCGLTSAAAEVMLRRRLLRRTAVFLVGSLAFPYISQIYPPLDLDVMLVFYGAIFFLALALAVLI
Ga0066708_1038846913300005576SoilMTHCLDCGSERTADQCPSCGLTSAAAEVMFRRRLLKRTAVFLAGSLAFPYVSQIYPPLDLDLMLVLFGGLFF
Ga0070762_1000477013300005602SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGVVFFVTLTLAI
Ga0070762_1050447613300005602SoilMSLTRCLDCGSPRTADQCPSCGLTSVAAELLFRRRLVSRTAIFLVGSLAFPYVSQIYPPLDLDLMLVF
Ga0070763_1087833423300005610SoilMTHCLDCGSERTTDQCPSCGLTSAAAEVMFRRRLVFRTAIFLLGSLAFPYISQIYPPLDIDLMLIFFGLIFF
Ga0070764_1103008413300005712SoilMSLTRCLDCGSPRTADQCPSCGLTSIAAELLFRRRLVSRTAIFLMGSLTFPYVSQIYAPLDLDLMLVFFGLL
Ga0066651_1030766513300006031SoilADQCPSCGLTSAAAEVMFRRRFLKRTGVFLAGSLAFPYVSQIYPPLDLDLLLVVFGGIFFAALPMAVFSTGARATTRSLKC*
Ga0075028_10045777913300006050WatershedsMTHCLDCGSERASEQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFG
Ga0075029_10121209123300006052WatershedsMAHCLDCGSERATDQCPVCGLTSAAAELVFRRRLIRQMSFFLAGSLLFPYISQIYPPLDIDAMLVFFGLIFFAALAI
Ga0075019_1036122823300006086WatershedsMTHCLDCGSERNTDQCPVCGLTSAAAELVFRRRLIRQMAIFLAGSLLFPYISQIYPPLDLDAMLVFFGLIFFLGLTLAI
Ga0099830_1098135923300009088Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMAVFLTGSLLFPYVS
Ga0126382_1057797113300010047Tropical Forest SoilLDCGAPRDVDQCPACGLTSAAAEVMFRKRLIKQTGFFLAGSLLFPYITPIYPPLDL
Ga0126382_1222932713300010047Tropical Forest SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTIFLAGSLLFPYLSQIYPPLDIDAMLVFFGLLFFVGLTLAIVLESRARARKEIQILKH
Ga0126373_1121242113300010048Tropical Forest SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTIFLAGSLLFPYLSQI
Ga0126373_1324696923300010048Tropical Forest SoilMTHCVECGAERDSDQCPVCGLTSAAAEVVFRRRLIRQMAIFLAGSLAFPYISQVYPPLDIDGMLVFFGLIFFLGLVLAIVLESRARARKEIEMLRHLFTGLIPVP
Ga0126376_1078359833300010359Tropical Forest SoilMSHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYLSQIYPPL
Ga0126372_1251545413300010360Tropical Forest SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTIFLAGSLLLPYLSQIFPPLDIDAMLVF
Ga0126381_10108680933300010376Tropical Forest SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTIFLAGSLLFPYLSQIYPPLDIDAMLVFYGLLFFVGLTLVIVLESRARARKEIEILKHLFTGLIPVPFILSVALFLNGKLDS
Ga0126383_1301442713300010398Tropical Forest SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLVRQMAVFLAGSLLFPYISQIYPPLDIDGMLVFFGVVFFLGLTIAIVLESRARARKEIEILRHLFSGL
Ga0137389_1173885123300012096Vadose Zone SoilMTDQCPSCGLTSAAAEVMFRRRLLKRTAVFLAGSLAFPYVSQIYPPLDLDLMLVFFGGLFFIALTIAVVLDRGARNR
Ga0137363_1086432223300012202Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGVVFFVALALAIVLESRARAQKEIEVLRHLFTGL
Ga0137362_1128073113300012205Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMAVFLTGSLLFPYVSQIYPPLDLDGMLVFFGVVFFVTLALAIVLESRARARKEIEVIRHLFTG
Ga0137360_1150091423300012361Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTAAAAELVFRRRLIRQMTVFLAGSLLFPYVSPIYPPLDLDGMLVFFGLVFFVTLALSIVLENRGR
Ga0137394_1013380453300012922Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLTL
Ga0137413_1090634113300012924Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDLDG
Ga0137404_1043804933300012929Vadose Zone SoilMTHCLDCGSERSSDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYVSQIYPPLDLDGLLVFFGVVFFVALALAIVLESRARAR
Ga0137404_1076918213300012929Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLTLALAIVLESR
Ga0137407_1019997213300012930Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLT
Ga0153915_1107375633300012931Freshwater WetlandsMKRCLECGAERGAEQCPGCGLTAAAAEVLLLRRLLRRTLIFLGGSLLFPYISQIYPPLDL
Ga0153915_1342483923300012931Freshwater WetlandsMKRCLECGAERGAEQCPACGLTAAAAEVMLLRRLLRRTLVFLGGSLLFPYISQIYPPLDLDAMMVF
Ga0153916_1085595313300012964Freshwater WetlandsMKRCLECGAERGAEQCPACGLTAAAAEVMLLRRLLRRTLIFLGGSLLFPYISQIYPPLDLDAMMVFYGVVFFLAIALAVV
Ga0181539_104550713300014151BogMTHCLDCGAERISDQCPVCGLTSAAAELVFRRRLLLQTAIFLTGSLLFPYVSQIYPPLDLDAMLVFFGLVFFVALTLAVVLERRAHARQEIEVLKHLFTG
Ga0137405_103015913300015053Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFF
Ga0137420_126722713300015054Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIVDGMLVFFGLVFFLTL
Ga0182036_1092491323300016270SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYISQIYPPLDIDGMLVFFGVAFFLVLAIAIVLESRARARKEIEILRHLFSGL
Ga0182041_1149801223300016294SoilMTHCLDCGSERTSDQCPVCGLTSPAAELVFRRRLIRQMAVFLAGSLLFPYISQIYPP
Ga0182033_1045873633300016319SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYISQIYPPLDIDGMLVFFGVVFFLGLAIAIVRESRARARKEIEILRHLFSGL
Ga0187802_1043002813300017822Freshwater SedimentMSHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTIFLAGSLLFPYLSQIYPPLD
Ga0187780_1004586413300017973Tropical PeatlandMTHCLDCGAERNSDQCPVCGLTSAAAEVVFRRRLIRQMAVFLAGSLLFPYISQVYPPLDIDGMLVFFGLIFFLGLAL
Ga0187816_1021430313300017995Freshwater SedimentMSHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTIFLAGSLLFPYLSQIYPPLDLDAML
Ga0187766_1018109213300018058Tropical PeatlandMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYLSQIYPPLDIDAMLVFYGLLFFAGLTLVIVLESRARARKEIEVLKH
Ga0187765_1031975123300018060Tropical PeatlandMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYLSQIYPPLDL
Ga0187772_1066956823300018085Tropical PeatlandMDCGAPRTSDQCPACGLTSAAAELVFRRRLLLQTAVFLAGSLFFPYVSQIYPPLD
Ga0066669_1000989763300018482Grasslands SoilMTHCLDCGSERTADQCPSCGLTSAAAEVMFRRRLLKRPAVFLAGSLGFPYISQIYPPL
Ga0210403_1113135023300020580SoilMTHCLDCGSERIADQCPTCGLTSAAAELVFRRRLLRRTAAFLVGSLAFPYVSQIYPPLDLDLMLVFFGLIFFLALTLAVILDRRARQRQELEVLKRLYSGFM
Ga0210401_1056790913300020583SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLALALA
Ga0210406_1035606833300021168SoilMSLTRCLDCGSPRTADQCPSCGLTSIAAELVFRRRLVGRTAIFLVGSLAFPYVSQIYPPLDLDLMLVFFG
Ga0210400_1150059713300021170SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLALALAIVLESRARARQE
Ga0210388_1124959613300021181SoilMSLTRCLDCGSPRTADQCDSCGLTSVAAELLFRRRLVGRTAIFLVGSLAFPYVSQIYPPLDLDLMLVFFGLLFFL
Ga0210393_1026942533300021401SoilMSLTRCLDCGSPRTADQCPSCGLTSIAAELVFRRRLVGRTAIFLVGSLAFPYVSQIYPPLDLDLMLVFFGLLFFL
Ga0210393_1138374423300021401SoilMSLTRCLDCGSPRTADQCPSCGLTSIAAELLFRRRLVGRTAIFLVGSLAFPYVSQIYPPLDLDLMLVFFGLLFFLALTIAVILERRARQ
Ga0210385_1125211823300021402SoilMTHCLDCGSERGTDQCPVCGLTSAAAELVFRRRLIHQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLALTLA
Ga0210397_1016792633300021403SoilMMRRCLDCGAERTTDQCPACGLTSAAAEFVFRRRLITQTAIFLAGSLVFPYISQIYPPLDLDAMLVFFGVVFFAALGLALFLENRARARKEIEA
Ga0210387_1029605033300021405SoilMTHCLDCGSERIADQCPTCGLTSAAAELVFRRRLLRRTAAFLVGSLAFPYVS
Ga0210383_1165516623300021407SoilMTHCLDCGSERTTDQCPSCGLTSAAAEVMFRRRLVLRTAIFLLGSLAFPYISQIYPPLDIDLMLIFFGLIFFLVL
Ga0210394_1002971063300021420SoilMSLTRCLDCGSPRTADQCPSCGLTSVAAELLFRRRLVGRTAIFLLGSLAFPYVSQIYPPLDLDLMLVFFGLLFFVALTIAVILEGR
Ga0210384_1116698613300021432SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIWQMTVFLAGSLLFPYVSQIYPPLDI
Ga0210392_1043872033300021475SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDLDGMLVFFGVVFFVALALAIVLESRARARKEIEVLRH
Ga0210392_1068115013300021475SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPP
Ga0210398_1013264713300021477SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYVSQIYPPLDLDGMLVFFGVVFFLTLALAIVLESRA
Ga0210398_1041034233300021477SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIWQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGVVFFVALALAIVLESR
Ga0210402_1073466933300021478SoilMTHCLDCGSERGTDQCPVCGLTSAAAELVFRRRLIHQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLALTLAIVLES
Ga0210402_1104070123300021478SoilMTRCVDCGSEKIADQCPACGLTSAAAELVFRRKLVNRTAIFLVGSLLFPYVSQLYPPLDLDLMLVFFGLLFFV
Ga0210410_1051603933300021479SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYVSQIYPPLDLDGMLVFFGVVFFLTLALAIVLESRARAR
Ga0210409_1139592013300021559SoilMSLTRCLDCGSPRTADQCPSCGLTSIAAELLFRRRLVARTAVFLVGSLAFPYVSQIYPPLDLDLMLVFFGLLFFLALTIA
Ga0242662_1020130913300022533SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDLDGMLVFFGVVFFVALALAIVLESRARA
Ga0242672_104113823300022720SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIWQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGVVFFVALALAIVLESRARARKEIEVLRHLFSGLIPI
Ga0242654_1024875113300022726SoilMTHCLDCGSERIADQCPACGLTSAAAELVFRRRLLRRTALFLLGSLAFPYVSQIYPPLDIDLMLVFY
Ga0224516_104929213300023232SoilVRTSDECPVCGLTSAAAELVFRRRLLLQMAIFLSGSLLFPYVSQIYAPLDLDAMLVFFGLVFFLALTLAVFLERRAHAHQEIEVLKHLFTGLIPI
Ga0247694_102725423300024178SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDLDGMLVFFG
Ga0137417_117027313300024330Vadose Zone SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLTLALAIDRAGGPGS
Ga0209378_109473733300026528SoilMTHCLDCGAERITDQCPSCGLTSAAAEVMLRRRLLRRTAVFLVGSLAFPYISQIYPPLDLDVMLVFYGAIFFLALALAVLIDHRARRHQEIEVLKRFYF
Ga0207781_100678933300026890Tropical Forest SoilMKRCLDCGSERTSDQCPNCGLTSAAAELVFRRRLLRQMAIFLAGSLLFPYVSQVYPPLDLDGMLVFFGLVFFVALVLAIFL
Ga0207779_102007213300026928Tropical Forest SoilMKRCLDCGSERTSDQCPNCGLTSAAAELVFRRRLLRQMAIFLAGSLLFPYVSQVYPPLDLDGMLVFFGLVFFVALVLAIFLEQRARARKEIQVLKHLFTGLIPVPFILSVALFLNGKLDSPSK
Ga0208097_103117123300027173Forest SoilMTHCLDCGSERTTDQCPSCGLTSAAAEVMFRRRLVFRTGIFLLGSLAFPYVSQIYPPLDLDLMLIFFG
Ga0209735_100042293300027562Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDLDGMLVFF
Ga0209422_104873333300027629Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLTLTLAIVLESRARARKEIEVLRH
Ga0209625_106477923300027635Forest SoilMTHCLDCGSERASDQCPVCGLTAAAAELVFRRRLIRQMAVFLTGSLLFPYVSQIYPPLDLDGMLVFFGVVFFLALALAIVLESRARSR
Ga0209177_1014782013300027775Agricultural SoilMTRCPDCGALRTADQCPSCGLTSAAAEVMFRKRLIRRILVFLVGSLAFPYVSQIYPPLDLDLMLVFFGVLFFAGLTVAIFL
Ga0209656_1021744033300027812Bog Forest SoilMTHCLDCGSPRTSDQCPNCGLTSAAAELVFRRRLLRQMALFLFGSLLFPYLSQVYPPLDLDAML
Ga0209656_1041223113300027812Bog Forest SoilMTHCLDCGSERLADQCPACGLTSKAAELVFRRRLLRRTAVFLLGSLAFPYVSQIYPPLDIDLMLVFFGIIFFLA
Ga0209580_1044071123300027842Surface SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFVTLALAIVLEGRARARKEIEV
Ga0209274_1012320413300027853SoilMSLTRCLDCGSPRTADQCPSCGLTSVAAELLFRRRLVSRTAIFLVGSLAFPYVSQIYPPLDLDLMLVFFGLLFFLALTIAVILEGRARQHK
Ga0209517_1017683013300027854Peatlands SoilVRTSDQCPVCGLTSAAAELVFRRRLLLQTAIFLIGSLLFPYVSQVYAPLDVDAMLVFFGVVFFLALTLAVFL
Ga0209167_1052760033300027867Surface SoilVTRCLDCGAERTADQCPSCGLTSAAAELVLRRRLIIRTAWFLIGALVFISASQIFPPLDLDEMLIFVGVVFFVGLA
Ga0209465_1004327813300027874Tropical Forest SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLVRQMAVFLAGSLLFPYISQIYPP
Ga0209275_1016008413300027884SoilMSLTRCLDCGSPRTADQCPSCGLTSVAAELLFRRRLVSRTAIFLVGSLAFPYVSQIYPPLDLD
Ga0265354_100248113300028016RhizosphereMSLTRCLDCGSPRTADQCPSCGLTSVAAELLFRRRLVGRTAIFLVGSLAFPYVSQIYPPLDLDLMLVF
Ga0308309_1041004613300028906SoilMSLTRCLDCGSPRTADQCPSCGLTSDAAELFFRRRLVARTAIFLVGSLAFPYVSQIYPPLDLDLMLVFFGLLFFVALTV
Ga0311369_1086464123300029910PalsaMTRCVDCGSPRVADQCPSCGLTSAAAELVFRRRLIHRTAIFLMGSLAFPYASQFYPPLDLDLILVFFGLLFF
Ga0311357_1132442913300030524PalsaMTRCVDCGSPRVADQCPSCGLTSAAAELVFRRRLIHRTAIFLMGSLAFPYASQFYPPLDLDLILVFFGLLFFLALTMAFFLER
Ga0170834_10252589313300031057Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYVSQIY
Ga0170834_11013787513300031057Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYVSQIYPPLDI
Ga0170822_1570601413300031122Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFG
Ga0302307_1053223913300031233PalsaMTRCVDCGSPRVADQCPSCGLTSAAAELVFRRRLIHRTAIFLMGSLAFPYASQFYPPLDLDLILVFFGLLFFLALTMAFFLERRARERKELEVLKR
Ga0318528_1066321013300031561SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYISQIYPPLDI
Ga0310686_10688820613300031708SoilMHCLDCGSERIGDQCPACGLTADAAELLFRRRLLWQMAIFLVGSLLFPYLSQVYPPLDLDGMLVFFG
Ga0307476_1081373513300031715Hardwood Forest SoilMSLTRCLDCGSPRVADQCPSCGLTSNAAELVFRRRLVGRTAIFLVGSLAFPYVSQIYPPLDLDLMLVFFGLLFFLALTIAVILERRAR
Ga0307476_1113837313300031715Hardwood Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYAPL
Ga0307474_1107423813300031718Hardwood Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLTGSLLFPYVSQIYPPLDLDGMLVFFGLVFFVTLALAIVLESRARARKEI
Ga0307474_1140037913300031718Hardwood Forest SoilMTHCLDCVSERTSDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGLVFFLALTLAIVLEGRA
Ga0307469_1082916933300031720Hardwood Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQI
Ga0307469_1163173813300031720Hardwood Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYVSQIYPPLDIDG
Ga0307475_1124604613300031754Hardwood Forest SoilMADQCPACGLTSAAAEVMFRRRFLKRSAVFLAGSLAFPYISQIFPPLDLDLMLILYGLIFFAALTIAVVLDRRARNRQELEL
Ga0307475_1127274223300031754Hardwood Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLILQMTVFLAGSLLFPYVSQIYPPLD
Ga0310910_1011780913300031946SoilMTHCLDCGSERTSDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYISQIYPPLDIDGMLVFFGVVFFL
Ga0307471_10197390313300032180Hardwood Forest SoilMTHCLDCGSERATDQCPVCGLTSAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDIDGMLVFFGVVFFAALALAIVLESRARA
Ga0307471_10218725913300032180Hardwood Forest SoilMTHCLDCGSERASDQCPVCGLTSAAAELVFRRRLIRQMAVFLTGSLLFPYVSQIYPPLDLDGMLVFFGVVFFVTLALAIV
Ga0307472_10166530913300032205Hardwood Forest SoilMTHCLDCGSERASDQCPVCGLTAAAAELVFRRRLIRQMTVFLAGSLLFPYVSQIYPPLDLDGMLVFFGL
Ga0335085_1159640723300032770SoilMTHCLDCGAQRTADQCPSCGLTTAAAELVFRKRLIKRTVIFLAGSLLFPYVTQYYPPLDLDLMLVFFGILFFLALFMAVLIDRRARKHQEIE
Ga0335080_1106364023300032828SoilMTHCLDCGAERTSDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYLSQIYPPLDIDGMLVFFGVVFFLGLAIAIALESRARARKEIEILRHLFTG
Ga0335069_1237294913300032893SoilMTHCLECGAERNSDQCPVCGLTSAAAELVFRRRLIRQMAVFLAGSLLFPYMSQVYPPLDIDAMLVFFGLIFFLGLG
Ga0335071_1087662223300032897SoilMTHCLDCGAERNSDQCPVCGLTSAAAEVVFRRRLIRQMAVFLAGSLLFPYISQVYPPLDIDGMLV
Ga0335071_1090761223300032897SoilMTHCLDCGAERNSDQCPVCGLTSAAAELVFRRRLIRQMAIFLGGSLVFPYISQVYPPLDIDGMLVFFGLIFFLGLTLAIVLESRARARKEIEILRHLFTGLIPVPIILSVALF
Ga0335084_1064801433300033004SoilMTHCLDCGAQRTADQCPSCGLTTAAAELVFRKRLIKRTVIFLAGSLLFPYVTQYYPPLDLDLMLVFFGILFFLAL
Ga0371488_0108644_3_2213300033983Peat SoilMTHCLDCGAERISDQCPVCGLTSAAAELVFRRRLLLQTAIFLTGSLLFPYVSQIYPPLDLDAMLVFFGLVFFV
Ga0326724_0106347_1_2013300034091Peat SoilMTHCLDCGAERISDQCPVCGLTSAAAELVFRRRLLLQTAIFLTGSLLFPYVSQIYPPLDLDAMLVFF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.