Metagenome / Metatranscriptome Family F072812

Basic Information
Family ID	F072812
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	88 residues
Representative Sequence	TSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Number of Associated Samples	88
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	70.25 %
% of genes from short scaffolds (< 2000 bps)	62.81 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Unclassified (72.727 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (52.066 % of family members)
Environment Ontology (ENVO)	Unclassified (91.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (76.860 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13540	RCC1_2	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
All Organisms	root	All Organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Viruses	superkingdom	All Organisms → Viruses	25.62 %
cellular organisms	root	All Organisms → cellular organisms	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	21.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	21.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	21.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	21.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	20.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	20.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.13 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000203\|TB18AUG2009E_c001010	Not Available	5000	Open in IMG/M
3300000203\|TB18AUG2009E_c018485	Not Available	775	Open in IMG/M
3300002933\|G310J44882_10032242	Not Available	1249	Open in IMG/M
3300002933\|G310J44882_10038337	All Organisms → Viruses → Predicted Viral	1110	Open in IMG/M
3300003375\|JGI26470J50227_1072761	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	545	Open in IMG/M
3300003789\|Ga0007835_1007934	Not Available	993	Open in IMG/M
3300003793\|Ga0007847_102245	Not Available	1158	Open in IMG/M
3300003798\|Ga0007842_1004853	Not Available	983	Open in IMG/M
3300003806\|Ga0007864_1004845	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1176	Open in IMG/M
3300003852\|Ga0031655_10297502	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	603	Open in IMG/M
3300004694\|Ga0065170_1058024	Not Available	520	Open in IMG/M
3300004770\|Ga0007804_1124599	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	651	Open in IMG/M
3300004770\|Ga0007804_1143329	Not Available	600	Open in IMG/M
3300004805\|Ga0007792_10173490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300004806\|Ga0007854_10010127	Not Available	5367	Open in IMG/M
3300006071\|Ga0007876_1102103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	740	Open in IMG/M
3300006072\|Ga0007881_1050777	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1080	Open in IMG/M
3300006100\|Ga0007806_1096284	Not Available	545	Open in IMG/M
3300006108\|Ga0007862_1040848	Not Available	970	Open in IMG/M
3300006108\|Ga0007862_1066982	Not Available	708	Open in IMG/M
3300006108\|Ga0007862_1108080	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	516	Open in IMG/M
3300006114\|Ga0007815_1070731	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	704	Open in IMG/M
3300006119\|Ga0007866_1061671	Not Available	703	Open in IMG/M
3300006119\|Ga0007866_1101018	Not Available	529	Open in IMG/M
3300006119\|Ga0007866_1102354	Not Available	525	Open in IMG/M
3300006121\|Ga0007824_1022541	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1260	Open in IMG/M
3300006122\|Ga0007837_1063188	Not Available	627	Open in IMG/M
3300006127\|Ga0007805_1136512	Not Available	523	Open in IMG/M
3300006129\|Ga0007834_1064472	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	832	Open in IMG/M
3300012749\|Ga0157566_1023261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	532	Open in IMG/M
3300020689\|Ga0214210_1016089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	638	Open in IMG/M
3300020698\|Ga0214241_1019951	Not Available	635	Open in IMG/M
3300020710\|Ga0214198_1020468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	826	Open in IMG/M
3300020711\|Ga0214237_1007787	All Organisms → Viruses → Predicted Viral	1550	Open in IMG/M
3300020715\|Ga0214254_1010126	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1463	Open in IMG/M
3300020723\|Ga0214249_1036246	Not Available	732	Open in IMG/M
3300020723\|Ga0214249_1054771	Not Available	545	Open in IMG/M
3300020732\|Ga0214201_1030159	Not Available	895	Open in IMG/M
3300020732\|Ga0214201_1057355	Not Available	557	Open in IMG/M
3300020735\|Ga0214219_1018418	Not Available	1181	Open in IMG/M
3300021121\|Ga0214173_129522	Not Available	516	Open in IMG/M
3300021133\|Ga0214175_1020328	Not Available	867	Open in IMG/M
3300021134\|Ga0214171_1020916	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	948	Open in IMG/M
3300021142\|Ga0214192_1113003	Not Available	730	Open in IMG/M
3300022555\|Ga0212088_10543700	Not Available	734	Open in IMG/M
3300025369\|Ga0208382_1039751	Not Available	558	Open in IMG/M
3300025379\|Ga0208738_1059186	Not Available	538	Open in IMG/M
3300025382\|Ga0208256_1011695	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1385	Open in IMG/M
3300025388\|Ga0208503_1026100	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300025390\|Ga0208743_1062058	Not Available	512	Open in IMG/M
3300025392\|Ga0208380_1033642	Not Available	793	Open in IMG/M
3300025401\|Ga0207955_1017404	Not Available	1367	Open in IMG/M
3300025401\|Ga0207955_1038633	Not Available	807	Open in IMG/M
3300025417\|Ga0208616_1003651	Not Available	2811	Open in IMG/M
3300025418\|Ga0208253_1065039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	590	Open in IMG/M
3300025423\|Ga0208746_1028205	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	965	Open in IMG/M
3300025437\|Ga0208742_1006959	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2098	Open in IMG/M
3300025466\|Ga0208497_1108152	Not Available	504	Open in IMG/M
3300025470\|Ga0208389_1010583	All Organisms → Viruses → Predicted Viral	2361	Open in IMG/M
3300025470\|Ga0208389_1099121	Not Available	505	Open in IMG/M
3300025598\|Ga0208379_1010514	All Organisms → Viruses → Predicted Viral	2802	Open in IMG/M
3300025616\|Ga0208613_1059757	Not Available	874	Open in IMG/M
3300025648\|Ga0208507_1138648	Not Available	680	Open in IMG/M
3300025648\|Ga0208507_1188912	Not Available	542	Open in IMG/M
3300025781\|Ga0208386_1020423	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1015	Open in IMG/M
3300025785\|Ga0208498_1025362	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	970	Open in IMG/M
3300027896\|Ga0209777_10364360	Not Available	1097	Open in IMG/M
3300031759\|Ga0316219_1068580	All Organisms → Viruses → Predicted Viral	1410	Open in IMG/M
3300031813\|Ga0316217_10409753	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	504	Open in IMG/M
3300032560\|Ga0316223_1008464	Not Available	6088	Open in IMG/M
3300032561\|Ga0316222_1011256	Not Available	6060	Open in IMG/M
3300032561\|Ga0316222_1253378	Not Available	596	Open in IMG/M
3300032562\|Ga0316226_1186995	Not Available	873	Open in IMG/M
3300032605\|Ga0316232_1156311	Not Available	956	Open in IMG/M
3300032605\|Ga0316232_1167490	Not Available	911	Open in IMG/M
3300032605\|Ga0316232_1202764	Not Available	796	Open in IMG/M
3300032665\|Ga0316221_1086512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1171	Open in IMG/M
3300032665\|Ga0316221_1110713	Not Available	993	Open in IMG/M
3300032665\|Ga0316221_1151700	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	803	Open in IMG/M
3300032665\|Ga0316221_1155684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	789	Open in IMG/M
3300032668\|Ga0316230_1184950	Not Available	749	Open in IMG/M
3300032676\|Ga0316229_1011726	Not Available	5030	Open in IMG/M
3300032676\|Ga0316229_1241936	Not Available	683	Open in IMG/M
3300032722\|Ga0316231_1138952	Not Available	1126	Open in IMG/M
3300032722\|Ga0316231_1302109	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	95.87%
Lake	Environmental → Aquatic → Freshwater → Lake	3.31%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	52.07%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	30.58%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	9.09%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.13%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	52.07%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	30.58%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	9.09%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.31%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.48%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.83%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.83%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300001849	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM26, ROCA_DNA190_2.0um_MCP-N_C_2b	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003793	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Jun08	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006114	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09	Environmental	Open in IMG/M
3300006116	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006129	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07	Environmental	Open in IMG/M
3300012749	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES066 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300020689	Freshwater microbial communities from Trout Bog Lake, WI - 03AUG2009 epilimnion	Environmental	Open in IMG/M
3300020698	Freshwater microbial communities from Trout Bog Lake, WI - 25AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020711	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 hypolimnion	Environmental	Open in IMG/M
3300020715	Freshwater microbial communities from Trout Bog Lake, WI - 27JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020720	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020723	Freshwater microbial communities from Trout Bog Lake, WI - 23JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020732	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021121	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 epilimnion	Environmental	Open in IMG/M
3300021133	Freshwater microbial communities from Trout Bog Lake, WI - 09AUG2007 epilimnion	Environmental	Open in IMG/M
3300021134	Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 epilimnion	Environmental	Open in IMG/M
3300021135	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025388	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025390	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025398	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025411	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025423	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025430	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025435	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025437	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025616	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M (SPAdes)	Environmental	Open in IMG/M
3300025648	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025785	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032561	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0071746	3300000176	Freshwater	ATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLVAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
TB18AUG2009E_0010101	3300000203	Freshwater	GTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
TB18AUG2009E_0184851	3300000203	Freshwater	TQLSYSSGTLQDVQNIQPGQQPSWFSQVVVTLAITGSSLATPTTGQIEVTLRYNQLDMNIGNSTTYPYGNFD*
TBL_comb47_HYPODRAFT_100215801	3300000553	Freshwater	TSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
RCM26_11020551	3300001849	Marine Plankton	GTATFVGTQLDYSYGTLQDVQNIQPGQQPSWFSQVVVTLKMTTSAAGLSSGQIEVTIRYNQVDQNIGNATTYPYGNFD*
G310J44882_100322421	3300002933	Freshwater	SGTIYRGVSFLIPQGSNITDVIVDVGTLPVGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
G310J44882_100383371	3300002933	Freshwater	QLPYASATLQDFQNPQVGTQPSWFSQVVVTLKITNTSLTTPTSGQIEVTVRYTQLDMNIGNSTTYPYGNFD*
JGI26470J50227_10503122	3300003375	Freshwater	GTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
JGI26470J50227_10727612	3300003375	Freshwater	TRGTATFVGSQLGYSSGTLQDFQNPQVGTQPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYYQLDMNIGNSTTYPYGNFD*
Ga0007835_10079342	3300003789	Freshwater	IQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIXVTLKYAQQXMNIGNATTYPYGNFD*
Ga0007847_1022452	3300003793	Freshwater	IYRGVSFLIPQGSNITDVIVDVGTLPVGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITASSITAPTSGQIAVTLKYAQQDLNIGNATTYPYGNFD*
Ga0007842_10048531	3300003798	Freshwater	YATMAAITSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNSTTYPYGNFD*
Ga0007864_10048452	3300003806	Freshwater	VTSATRCTATFVGTQLPYASATLQDVQNIQPGQQPSWFSQVVVTLAITGSSLATPTTGQIEVTVRYNQLDMNIGNSTTYPYGNFD*
Ga0007861_10090971	3300003812	Freshwater	SITSVGRTACTFTGTQLDNCYGTLQDVQNIQPGQQPTWFSQIVVTLKITGSSLTTVSAGQIAVSLRYIQQDLNIGNATTYPYGNFD*
Ga0007877_10235482	3300003814	Freshwater	QLVSSFGTLQDVQNLQPGTQPTWFSQVVVTLKITNTSLTTPTSGQIAVSLKYAQQDLNIGSSTAYPYGNFD*
Ga0007856_10149391	3300003815	Freshwater	FTGTTLDNANGTLSDVQNIQPGTQPTWFSQVVVTLKMTATSLGTLASGQINITLKYAQQDLNIGNGTTYPYGNFD*
Ga0031655_100901071	3300003852	Freshwater Lake Sediment	GTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQVVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNATTYPXGNFD*
Ga0031655_102975021	3300003852	Freshwater Lake Sediment	RGTATYVGTQLPYASATLQDFQNPNVGLEPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQNDMNIGSSTAYPYGNFD*
Ga0065170_10580242	3300004694	Freshwater	QLPNASATLQDFQNPQVGTDPAWFGQVVVTLKITNTGLTTPTSGQIEVTMRYNQNDMNIGTSSAYPYGNFD*
Ga0007804_11200292	3300004770	Freshwater	GTLQDVQNMQPGTQPSWFSQVVVTLKITNTSLATPTSGQIAITLKYAQQDLNIGNTTTYPYGNFD*
Ga0007804_11245992	3300004770	Freshwater	SSPAAQRYTGTYVGSQLTNSNATLQDFQNLQPGQEPAWFSQVVVTLKMTTTAAGLSSGQVEVTIRYNPNDMNIGNSTTYPYGNFD*
Ga0007804_11433291	3300004770	Freshwater	VGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITASSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007792_101734901	3300004805	Freshwater	GVYATMAAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPTWFSQVVVTLKITNTSLVAPTTGQIAVTLRYAQQDMNIGNGTTYPYGNFD*
Ga0007854_1001012714	3300004806	Freshwater	NISSPAAQRYTATYVGSQLINSNATLQDFQNLQPGQQPSWFSQVVVTLAMTTTAAGLSSGQVEVTLRYNQNDMNIGTSTTYPYGNFD*
Ga0007876_11021032	3300006071	Freshwater	VGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007881_10450953	3300006072	Freshwater	QDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007881_10507772	3300006072	Freshwater	AITSATRGTATFVGTQLDYAYGTLQDVQNIQPGTQPSWFSQVVVTLKITNTSLTTPTSGQIAITLKYAQQDMNIGNATTYPYGNFD*
Ga0007881_11432801	3300006072	Freshwater	RGTTTFTGTTLDNANGTLSDVQNIQPGTQPTWFSQVVVTLKMTATSLGTLASGQINITLKYAQQDLNIGNGTTYPYGNFD*
Ga0007806_10962841	3300006100	Freshwater	VGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQIVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007833_10257011	3300006106	Freshwater	TATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007862_10408482	3300006108	Freshwater	VYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITASSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007862_10669822	3300006108	Freshwater	ATFVGSQLTNSNATLQDFQNLQPGQQPSWFSQVVVTLAMTTTAAGLSSGQVEMTIRYTQNDMNIGTSTTYPYGNFD*
Ga0007862_11080801	3300006108	Freshwater	SAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQITVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007815_10707312	3300006114	Freshwater	SFLIPQGSNITDVIVDVGTLPVGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007807_10035851	3300006116	Freshwater	TFTGTTLDNANGTLSDVQNIQPGTQPTWFSQVVVTLKMTATSLGTLASGQINITLKYAQQDLNIGNGTTYPYGNFD*
Ga0007866_10616713	3300006119	Freshwater	ATMAAITSATRGTATYVGTQLPYASATLQDFQNPNVGLEPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQNDMNIGSSTAYPYGNFD*
Ga0007866_11010181	3300006119	Freshwater	TATFTGTQLDYANGTLQDVQNLQPGTQPSWFSQVVVTVKMTVASLTAPTSGQMNITLRYAQQDLNIGNGTTYPYGNFD*
Ga0007866_11023542	3300006119	Freshwater	TFTSTQLANVNGTLQDVQNLQPGTQPTWFSQVVVTLKLTVASLTAPTSGQINVTLRYTQQDLNIGNGTTYPYGNFD*
Ga0007824_10225413	3300006121	Freshwater	YVSNAFATSTGVYATMAAITSATRGTATFVGTQLDNAWGTLQDVQNIQPGQQPAWLSQIVVTLAITGSSLTAPTSGQIGVTLRYAQQDLNIGNATTYPYGNFD*
Ga0007837_10631882	3300006122	Freshwater	GGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007805_11365122	3300006127	Freshwater	SIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQIVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0007834_10644722	3300006129	Freshwater	MAAITSATRGTATYVGSQLTNSNATLQDFQNPLVGQQPSWFSQVVVTLKITNTSLTTPTSGQIEVTIRYNQNDMNIGNSTTYPYGNFD*
Ga0157566_10232611	3300012749	Freshwater	ATRGTATYVGSQLTNSNATLQDFQNPLVGQQPSWFSQVVVTLKITNTSLTTPTSGQIEVTIRYNQNDMNIGNSTTYPYGNFD*
Ga0164296_10602665	3300013093	Freshwater	FGTLQDVQNIQPGQQPSWFSQVVVTLKLTNTGLVAPTSGQIAVTLKYAQQDLNIGNSTTYPYGNFD*
Ga0164296_10645911	3300013093	Freshwater	GTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD*
Ga0214210_10160891	3300020689	Freshwater	STFVGTQLQYSNSTLQDVQNIQPGQQPTWFSQVIVTLKITNTSLVAPTSGQIEVTLRYAQQDMNIGNSTTYPYGNFD
Ga0214241_10199512	3300020698	Freshwater	FANISSPAAQRYTATYVGSQLTNSNATLQDFQNLQPGQQPSWFSQVVVTLAMTTTAAGLSSGQVEVTLRYNQNDMNIGTSTTYPYGNFD
Ga0214198_10204682	3300020710	Freshwater	GTATFVGSQLGYSSGTLQDFQNPQVGTQPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYYQLDMNIGNSTTYPYGNFD
Ga0214237_10077871	3300020711	Freshwater	VGSQLAPTLQDFQNPQVGTQPSWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQLDMNIGNSTTYPYGNFD
Ga0214254_10101261	3300020715	Freshwater	ISSPAAQRYTATFVGSQLTNSNATLQDFQNLQAGQEPAWFTQVVVTLKMTTTSAGLSSGQVEVTLRYNQNDMNIGNATTYPYGNFD
Ga0214252_10080055	3300020720	Freshwater	DYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQITVTLKYAQQDMNIGNATTYPYGNFD
Ga0214249_10362462	3300020723	Freshwater	ATFVGTQLQYSAATLQDVQNLQPGNEPAWFSQVVVTLAITASSLTAPTSGQIEVTLRYAQNDMNIGNATTYPYGNFD
Ga0214249_10547711	3300020723	Freshwater	GTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0214220_10082695	3300020726	Freshwater	YAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQITVTLKYAQQDMNIGNATTYPYGNFD
Ga0214201_10301592	3300020732	Freshwater	VGTQLPYASATLQDVQNIQPGQQPSWFSQVVVTLAITGSSLATPTTGQIEVTVRYNQLDMNIGNSTTYPYGNFD
Ga0214201_10573552	3300020732	Freshwater	MAAITSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLVAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0214219_10184182	3300020735	Freshwater	TSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQITVTLKYAQQDMNIGNATTYPYGNFD
Ga0214173_1295222	3300021121	Freshwater	ASSTLQDFQNPVVGSNPSWFSQLVVTLKITNTSLTTPTSGQIEVTVRYNQLDMNIGNSTTYPYGNFD
Ga0214175_10203282	3300021133	Freshwater	ITSATRGTATYVGTQLPYASATLQDFQNPVVGSQPSWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQLDMNIGNSTTYPYGNFD
Ga0214171_10209162	3300021134	Freshwater	MSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0214247_100071328	3300021135	Freshwater	FVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLVAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0214247_10346373	3300021135	Freshwater	FVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0214192_11130031	3300021142	Freshwater	TSATRGTATYVGTQLPYASATLQDFQNPNVGLEPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQNDMNIGSSTAYPYGNFD
Ga0212088_105437001	3300022555	Freshwater Lake Hypolimnion	SATRGTSTFVGTQLQYSNATLQDVQNIQPGQQPTWFSQVVVTLKITNTSLVAPTSGQIEVTMRYAQQDMNIGNSTTYPYGNFD
Ga0208382_10397512	3300025369	Freshwater	TSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITASSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0208738_10591861	3300025379	Freshwater	GGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITASSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0208871_10463261	3300025381	Freshwater	QLTNGNATLQDFQNPQVGTDPAWFGQVVVTLKITNTGLTTPTSGQIEVTMRYNQNDMNIGSSTAYPYGNFD
Ga0208256_10116951	3300025382	Freshwater	GTMAAITSAGRGTATFTGTQLDYANGTLQDVQNLQPGTQPSWFSQVVVTVKMTVASLTAPTSGQMNITLRYAQQDLNIGNGTTYPYGNFD
Ga0208503_10261001	3300025388	Freshwater	GGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0208257_10180792	3300025389	Freshwater	ATFVGSQLPNSSATLQDFQNLQPGQEPAWLSQVVITLKMTTSVAGLSSGQVEVTLRYNQNDMNIGNATTYPYGNFD
Ga0208743_10620581	3300025390	Freshwater	GTLPVGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITASSITAPTSGQIAVTLKYAQQDLNIGNATTYPYGNFD
Ga0208380_10336421	3300025392	Freshwater	SNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQITVTLKYAQQDMNIGNATTYPYGNFD
Ga0208251_10290722	3300025398	Freshwater	TFVGSQLTNSNATLQDFQNLQAGQEPAWFTQIVVTLKMTTTSAGLSSGQVEVTLRYNQNDMNIGNATTYPYGNFD
Ga0207955_10174043	3300025401	Freshwater	SATRGTATFVGTQLTYSGATLQDVQNIQPGQQPSWFSQVVVTLAITGSSLATPTTGQIEVTVRYNQLDMNIGNSTTYPYGNFD
Ga0207955_10386332	3300025401	Freshwater	TGVYATFANISSPAAQRYTATFVGTQLDNAYGTLQDVQNLQPGQQPSWFSQVVVTLKMTTSVAGLSSGQLAITLKYAQQDMNIGNATTYPYGNFD
Ga0208876_10179743	3300025402	Freshwater	FVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNF
Ga0208865_10147911	3300025411	Freshwater	TANSVVQLDNAIGTLQDVQNIQPGQQPTWFSQVVVTLGMTVASLTSVNSGQINITIKYTQADLNIGNVTTYPYGNFD
Ga0208614_10140691	3300025413	Freshwater	GTLQDVQNLQPGTQPSWFSQVVVTVKMTVASLTAPTSGQMNITLRYAQQDLNIGNGTTYPYGNFD
Ga0208616_10036511	3300025417	Freshwater	TATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0208253_10650391	3300025418	Freshwater	LPVGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQITVTLKYAQQDMNIGNATTYPYGNFD
Ga0208746_10282051	3300025423	Freshwater	ISSPAAQRYTATFVGSQLTNSNATLQDFQNLQAGQEPAWFTQIVVTLKMTTTSAGLSSGQVEVTLRYNQNDMNIGNATTYPYGNFD
Ga0208622_10273661	3300025430	Freshwater	RYTATFVGTQLDNAYGTLQDVQNLQPGQQPSWFSQVVVTLKMTTSVAGLSSGQLAVTLKYAQQDMNIGTSTTYPYGNFD
Ga0208618_10245143	3300025435	Freshwater	VGRTACTFTGTQLDNCYGTLQDVQNIQPGQQPTWFSQIVVTLKITGSSLTTVSAGQIAVSLRYIQQDMNIGNATTYPYGNFD
Ga0208742_10069595	3300025437	Freshwater	MPADNAGSPVTVTSIQPYISNNFATSTGVYGVMSAITSAGRGTATFTGTTLDNANGTLLDVQNIQPGNQPSWFSQVVVTLKMTASSLGTLASGQINITLKYAQQDLNIGNGTTYPYGNFD
Ga0208497_11081521	3300025466	Freshwater	DTSGTIYRGVSFLIPQGSNITDVIIDVGTLPVGGGVTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0208389_10105831	3300025470	Freshwater	TFANISSPATQRYNATFVGTQLSNANATLQDVQNLQPGTQPTWFSQVVVTLAMTTSTAGLSSGQIEVTIRYNQTDPNIGSSTTYPYGNFD
Ga0208389_10991211	3300025470	Freshwater	TSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQIVVTLKITAGSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0208379_10105141	3300025598	Freshwater	SVDIDVGSLPAGGGVTATAIQPYVSNQFTTSAGVYATFPSITAVGRTACTFTGTQLDNSYGTLQDVQNIQPGQQPSWFSQVVVTLKITAPSLTTVSSGQIAVSLRYMQQDLNIGNATTYPYGNFD
Ga0208613_10597572	3300025616	Freshwater	GVYATMAAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPTWFSQVVVTLKITNTSLVAPTTGQIAVTLRYAQQDMNIGNGTTYPYGNFD
Ga0208507_11386481	3300025648	Freshwater	FVGTQLTYSGATLQDVQNIQPGQQPSWFSQVVVTLAITGSSLATPTTGQIEVTVRYNQLDMNIGNSTTYPYGNFD
Ga0208507_11889121	3300025648	Freshwater	VTATSIQPYVSNAFATSTGVYATMSAITSATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKITASSITAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0208386_10204232	3300025781	Freshwater	STGVYATMAAITSATRGTATFVGTQLQYSAATLQDVQNLQPGNEPAWFSQVVVTLAITASSLTAPTSGQIEVTLRYAQNDMNIGNATTYPYGNFD
Ga0208498_100417810	3300025785	Freshwater	TFTGTTLDNANGTLSDVQNIQPGTQPTWFSQVVVTLKMTATSLGTLASGQINITLKYAQQDLNIGNGTTYPYGNFD
Ga0208498_10253624	3300025785	Freshwater	ATRGTATYVGTQLPYASATLQDFQNPNVGLEPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQNDMNIGSSTAYPYGNFD
Ga0208499_10539222	3300025789	Freshwater	QLDNAYGTLQDVQNLQPGQQPSWFSQVVVTLKMTTSVAGLSSGQLAITLKYAQQDMNIGNATTYPYGNFD
Ga0209777_103643601	3300027896	Freshwater Lake Sediment	TFANISSPATQRYTATFVGTQLDYSYGTLQDVQNLQPGQQPTWFSQVVVTLKMTTSTAGLSSGQLAVTLKYAQQDLNIGNSTTYPYGNFD
Ga0209777_111000092	3300027896	Freshwater Lake Sediment	TGVYGVMSAITSAGRGTATFTGTTLDNANGTLSDVQNIQPGTQPTWFSQVVVTLKMTATSLGTLASGQINITLKYAQQDLNIGNGTTYPYGNFD
Ga0316219_10685804	3300031759	Freshwater	GTATFVGSQLTNSNATLQDFQNPLVGQQPSWFSQVVVTLKITNTSLTTPTSGQIEVTMRYNQNDMNIGNSTTYPYGNFD
Ga0316219_11678092	3300031759	Freshwater	ANSSGTLQDFQNPNIGQDPTWFSQVVVGLKMTTSSAGLTSGQVEITIRYNQLDMNIGNSTTYPYGNFD
Ga0316217_104097532	3300031813	Freshwater	ATSTGVYATFANISSPATQRYTATFVGTQLDYSYGTLQDVQNLQPGQQPTWFSQVVVTLKMTTSTAGLSSGQLAVTLKYAQQDLNIGNSTTYPYGNFD
Ga0316220_10093911	3300031884	Freshwater	VGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0316220_10956812	3300031884	Freshwater	SASATYPGTQLPNSSYTLQDVQNLQPGNQPTWFSQVVVTLAITGSSLGTPTTGQIGVTVRYAQNDMNIGNATTYPYGNFD
Ga0316223_100846415	3300032560	Freshwater	VTANSIQPYVSNKFATATGVYATMAAITSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0316223_11420861	3300032560	Freshwater	NANGTLQDVQNIQPGQQPTWFSQIVVTLKMTVASLTSVNAGQFNITIRYTQADPNIGNATTYPYGNFD
Ga0316222_10112561	3300032561	Freshwater	IQPYVSNKFATATGVYATMAAITSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTAPTSGQIAVTLKYAQQDMNIGNATTYPYGNFD
Ga0316222_12533781	3300032561	Freshwater	QLPYASATLQDFQNPNVGLEPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQNDMNIGNSTTYPYGNFD
Ga0316226_11869951	3300032562	Freshwater	ITSATRGTATFVGTQLDYAYGTLQDVQNMQPGTQPTWFSQVVVTLKITNTSLTTPTSGQIAVTLKYAQQDLNIGNSTTYPYGNFD
Ga0316232_11563111	3300032605	Freshwater	TYVGTQLPYASATLQDFQNPNVGLEPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQNDMNIGNSTTYPYGNFD
Ga0316232_11674901	3300032605	Freshwater	YVSNNFATSTGVYATMAAVTSATRGTATFVGTQLSYSSGTLQDVQNIQPGQQPSWFSQVVVTLAITGSSLATPTTGQIEVTLRYNQLDMNIGNSTTYPYGNFD
Ga0316232_12027641	3300032605	Freshwater	STFANISSPAAQRYTATFVGTQLANSSGTLQDFQNPNIGQDPTWFSQVVVGLKMTTSSAGLTSGQVEITIRYNQLDMNIGNSTTYPYGNFD
Ga0316221_10865121	3300032665	Freshwater	VGTQLPYASATLQDFQNPNVGLEPTWFSQVVVTLKITNTSLTTPTSGQIEVTLRYNQNDMNIGSSTAYPYGNFD
Ga0316221_11107132	3300032665	Freshwater	VSNKFATATGVYATMAAITSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPAWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNSTTYPYGNFD
Ga0316221_11517002	3300032665	Freshwater	MAAITSATRGTATYVGSQLTNSNATLQDFQNPLVGQQPSWFSQVVVTLKITNTSLTTPTSGQIEVTMRYNQNDMNIGNSTTYPYGNFD
Ga0316221_11556841	3300032665	Freshwater	STGVYATMAAITTATRGTATFVGTQLDYAFGTLQDVQNIQPGQQPSWFSQVVVTLKLTNTGLVAPTSGQIAVTLKYAQQDMNIGNSTTYPYGNFD
Ga0316230_11849503	3300032668	Freshwater	GVYATMAAVTSATRGTATFVGTQLSYSSGTLQDVQNIQPGQQPSWFSQVVVTLAITGSSLATPTTGQIEVTLRYNQLDMNIGNSTTYPYGNFD
Ga0316229_10117261	3300032676	Freshwater	ATGVYATMAAITTATRGTATFVGTQLDYSYGTLQDVQNIQPGQQPSWFSQVVVTLKLTNTGLVAPTSGQIAVTLKYAQQDLNIGNSTTYPYGNFD
Ga0316229_12419362	3300032676	Freshwater	SPAAQRYTGTFVGTQLPNSSSTLQDFQNLQPGTQPTWFSQVVVTLAMTTTAAGLSSGQVEVSIRYNQLDMNIGNTTTYPYGNFD
Ga0316231_10765656	3300032722	Freshwater	VGTQLDYAYGTLQDVQNIQPGQQPTWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGTSTTYPYGNFD
Ga0316231_11389522	3300032722	Freshwater	YATMAAITSATRGTATFVGTQLDYAYGTLQDVQNIQPGQQPAWFSQIVVTLKITNTSLTTPTSGQIAVTLKYAQQDMNIGNSTTYPYGNFD
Ga0316231_13021091	3300032722	Freshwater	DGTVTANSIQPYVSNKFATSTGVYATMAAITTATRGTATFVGTQLDYSFGTLQDVQNIQPGQQPSWFSQVVVTLKLTNTGLVAPTSGQIAVTLKYAQQDLNIGNSTTYPYGNFD
Ga0316224_11021451	3300032753	Freshwater	ATYVGSQLTNSNATLQDFQNLQPGQQPSWFSQVVVTLGMTTSAAGLSSGQVEITLRYNQNDMNIGTSTTYPYGNFD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072812

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign