Metagenome / Metatranscriptome Family F072805

Overview

Basic Information

• Family ID: F072805
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 121
• Average Sequence Length: 46 residues
• Representative Sequence: LARMAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
• Number of Associated Samples: 112
• Number of Associated Scaffolds: 121

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 7.50 %
• % of genes near scaffold ends (potentially truncated): 85.12 %
• % of genes from short scaffolds (< 2000 bps): 81.82 %
• Associated GOLD sequencing projects: 108
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (88.430 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.876 % of family members)
• Environment Ontology (ENVO): Unclassified (22.314 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (55.372 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 38.89%
  β-sheet: 0.00%
  Coil/Unstructured: 61.11%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13620	CarboxypepD_reg	6.61
PF07676	PD40	4.96
PF14559	TPR_19	3.31
PF00459	Inositol_P	1.65
PF00092	VWA	0.83
PF00884	Sulfatase	0.83
PF02597	ThiS	0.83
PF01053	Cys_Met_Meta_PP	0.83
PF05362	Lon_C	0.83
PF16472	DUF5050	0.83
PF13407	Peripla_BP_4	0.83
PF00694	Aconitase_C	0.83
PF13683	rve_3	0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.83
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.83
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.83
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.83
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.83
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.83
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.83
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.83
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.83
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.83
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.83
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.83
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.83

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.43 %
Unclassified	root	N/A	11.57 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.43 %
Unclassified	root	N/A	11.57 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.43 %
Unclassified	root	N/A	11.57 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.21 %
Unclassified	root	N/A	11.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Level 5

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.70 %
Unclassified	root	N/A	11.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.70 %
Unclassified	root	N/A	11.57 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.83 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.72 %
Unclassified	root	N/A	11.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.79 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.83 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.72 %
Unclassified	root	N/A	11.57 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.48 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.83 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.72 %
Unclassified	root	N/A	11.57 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.48 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.83 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000579|AP72_2010_repI_A01DRAFT_1057851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569
3300000837|AP72_2010_repI_A100DRAFT_1000292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9087
3300001471|JGI12712J15308_10039894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202
3300001867|JGI12627J18819_10252273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710
3300002245|JGIcombinedJ26739_100388527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275
3300003505|JGIcombinedJ51221_10217094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776
3300004152|Ga0062386_100139606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1885
3300004479|Ga0062595_100043245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1990
3300005332|Ga0066388_104228323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732
3300005435|Ga0070714_100000828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21874
3300005542|Ga0070732_10528449	All Organisms → cellular organisms → Bacteria → Acidobacteria	715
3300005568|Ga0066703_10247592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082
3300005575|Ga0066702_10047179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2298
3300005598|Ga0066706_10622118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857
3300005602|Ga0070762_10171468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312
3300005610|Ga0070763_10005984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4747
3300005614|Ga0068856_101172156	All Organisms → cellular organisms → Bacteria → Acidobacteria	785
3300006059|Ga0075017_101195444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595
3300006163|Ga0070715_10012379	All Organisms → cellular organisms → Bacteria	3104
3300006903|Ga0075426_10815294	All Organisms → cellular organisms → Bacteria	702
3300007788|Ga0099795_10537400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549
3300009088|Ga0099830_10327243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228
3300009525|Ga0116220_10225368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815
3300009545|Ga0105237_12775825	Not Available	501
3300009623|Ga0116133_1210831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525
3300009640|Ga0116126_1093223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083
3300010361|Ga0126378_10410081	All Organisms → cellular organisms → Bacteria	1468
3300010366|Ga0126379_12457638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620
3300010401|Ga0134121_13127123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511
3300010876|Ga0126361_10687007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120
3300010937|Ga0137776_1283766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	960
3300011120|Ga0150983_15611703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686
3300011270|Ga0137391_11399661	Not Available	545
3300011271|Ga0137393_11036058	Not Available	698
3300012203|Ga0137399_11694022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521
3300012206|Ga0137380_11587244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539
3300012212|Ga0150985_104042336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199
3300012359|Ga0137385_10533514	Not Available	991
3300012925|Ga0137419_10866486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742
3300012948|Ga0126375_10325720	All Organisms → cellular organisms → Bacteria	1078
3300012987|Ga0164307_10836863	Not Available	735
3300013297|Ga0157378_11937051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639
3300014201|Ga0181537_10886006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	605
3300014498|Ga0182019_10625203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	758
3300014498|Ga0182019_11407668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517
3300014654|Ga0181525_10103072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1578
3300014657|Ga0181522_10726422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	607
3300015265|Ga0182005_1207104	Not Available	592
3300016294|Ga0182041_12088237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528
3300016705|Ga0181507_1332971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1986
3300017924|Ga0187820_1186508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	641
3300017943|Ga0187819_10471501	All Organisms → cellular organisms → Bacteria	717
3300017975|Ga0187782_10715854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	772
3300017999|Ga0187767_10350212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519
3300018006|Ga0187804_10079906	All Organisms → cellular organisms → Bacteria	1321
3300018006|Ga0187804_10515777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538
3300018006|Ga0187804_10545652	Not Available	524
3300018007|Ga0187805_10305509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732
3300018033|Ga0187867_10564227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624
3300018057|Ga0187858_10804149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556
3300018085|Ga0187772_10180405	All Organisms → cellular organisms → Bacteria	1410
3300020582|Ga0210395_10361209	Not Available	1092
3300020583|Ga0210401_10008902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9917
3300020583|Ga0210401_10163521	All Organisms → cellular organisms → Bacteria	2077
3300021088|Ga0210404_10863895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517
3300021170|Ga0210400_10223259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1535
3300021180|Ga0210396_11026382	Not Available	697
3300021181|Ga0210388_11265636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624
3300021181|Ga0210388_11499613	Not Available	563
3300021404|Ga0210389_10150146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1807
3300021407|Ga0210383_10086258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2632
3300021432|Ga0210384_11431325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596
3300021474|Ga0210390_10424826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1123
3300021477|Ga0210398_10017858	All Organisms → cellular organisms → Bacteria → Acidobacteria	6105
3300021559|Ga0210409_10047014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4070
3300021861|Ga0213853_10944053	Not Available	1516
3300022509|Ga0242649_1000108	All Organisms → cellular organisms → Bacteria	4210
3300022522|Ga0242659_1021071	All Organisms → cellular organisms → Bacteria	1003
3300022722|Ga0242657_1000584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3864
3300022726|Ga0242654_10007079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2288
3300025494|Ga0207928_1024590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170
3300025905|Ga0207685_10031124	All Organisms → cellular organisms → Bacteria	1907
3300025906|Ga0207699_11017435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613
3300025913|Ga0207695_10130580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2470
3300025915|Ga0207693_10177178	All Organisms → cellular organisms → Bacteria	1678
3300026078|Ga0207702_10976767	All Organisms → cellular organisms → Bacteria	840
3300026078|Ga0207702_11090430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792
3300026215|Ga0209849_1074330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599
3300026294|Ga0209839_10215057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613
3300026305|Ga0209688_1068724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638
3300026334|Ga0209377_1197085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678
3300026552|Ga0209577_10179014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1645
3300027117|Ga0209732_1021812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088
3300027502|Ga0209622_1101453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528
3300027667|Ga0209009_1131676	Not Available	636
3300027729|Ga0209248_10020888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2048
3300027812|Ga0209656_10254953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828
3300027825|Ga0209039_10004378	All Organisms → cellular organisms → Bacteria → Acidobacteria	10364
3300027825|Ga0209039_10173841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	887
3300027842|Ga0209580_10363217	All Organisms → cellular organisms → Bacteria → Acidobacteria	721
3300027867|Ga0209167_10731899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540
3300027898|Ga0209067_10631948	All Organisms → cellular organisms → Bacteria	617
3300027915|Ga0209069_10828478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555
3300028800|Ga0265338_10023229	All Organisms → cellular organisms → Bacteria → Acidobacteria	6383
3300028800|Ga0265338_10986087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	571
3300030617|Ga0311356_11934840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522
3300030763|Ga0265763_1010186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865
3300031057|Ga0170834_101380219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393
3300031234|Ga0302325_10067083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6974
3300031446|Ga0170820_10846880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946
3300031525|Ga0302326_12572912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	636
3300031715|Ga0307476_10145869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1697
3300031754|Ga0307475_10524694	All Organisms → cellular organisms → Bacteria	950
3300031868|Ga0316038_100035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4169
3300031962|Ga0307479_10364988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1428
3300032160|Ga0311301_10842295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249
3300032174|Ga0307470_10076264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1831
3300032261|Ga0306920_100465613	Not Available	1878
3300033158|Ga0335077_10145864	All Organisms → cellular organisms → Bacteria → Acidobacteria	2722
3300033983|Ga0371488_0059569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2301

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.91%
Host-Associated	Host-Associated	9.09%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.07%
Aquatic	Environmental → Aquatic	19.83%
Plants	Host-Associated → Plants	9.09%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.77%
Freshwater	Environmental → Aquatic → Freshwater	16.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.79%
Peat	Environmental → Terrestrial → Peat	3.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.31%
Sediment	Environmental → Aquatic → Sediment	2.48%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.70%
Loam	Environmental → Terrestrial → Soil → Loam	13.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.13%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.65%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated
3300030617	II_Palsa_N2 coassembly	Environmental
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031868	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome) (v2)	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10578511	3300000579	Forest Soil	IPSDVASIRRGTLPKDTIQKLKQIEKLSKRLRDELNP*
AP72_2010_repI_A100DRAFT_10002926	3300000837	Forest Soil	LARAAQTIPSDVASIRRGTLPKDTIQKLKQIEKLSKRLRDELNP*
JGI12712J15308_100398942	3300001471	Forest Soil	TIPTDVESIRKGMLPKDVLLKLKQIERLSKRLRSELNP*
JGI12627J18819_102522732	3300001867	Forest Soil	DDLARMAQTIPTDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
JGIcombinedJ26739_1003885271	3300002245	Forest Soil	QTIPTDVESIRKGMLPKDVLLKLKQIERLSKRLRSELNP*
JGIcombinedJ51221_102170941	3300003505	Forest Soil	MAQTIPNDVASVRKGMLPKNVIEKLKQIEKLSKRLRTQLNL*
Ga0062386_1001396061	3300004152	Bog Forest Soil	TAQTIPGDVANVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0062595_1000432451	3300004479	Soil	QAQREADELARMAQTVPADVTKVREGMLPKDAIEKLKQIERLSKHLRAQLNP*
Ga0066388_1042283232	3300005332	Tropical Forest Soil	ADDLARVAQTIPVDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0070714_1000008282	3300005435	Agricultural Soil	MQRDADDLARTAQSIPTDVASVRKGMLPKDIIQKLKQIEKLSKHLRTQLNP*
Ga0070732_105284491	3300005542	Surface Soil	IPSDIANIRAGTLPKDTIQKLKEIEKLSKRLRSELNH*
Ga0070732_109191332	3300005542	Surface Soil	PSDVANVRKGMLPKDVIEKLKQIEKLSKHLRSELNP*
Ga0066703_102475922	3300005568	Soil	TDLEQAQREADELARMAQTVPADVTKVREGMLPKDAIEKLKQIERLSKHLRTELTQ*
Ga0066702_100471792	3300005575	Soil	RTAQTIPTDVAGVRQGTLPKDMIEKLRRIEKLSKRLRSELNP*
Ga0066706_106221181	3300005598	Soil	DLARTAQTIPADVASVRKGMLPKDVIEKLKQIERLSKHLRTELNP*
Ga0070762_101714682	3300005602	Soil	PREADELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP*
Ga0070763_100059843	3300005610	Soil	MSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP*
Ga0068856_1011721561	3300005614	Corn Rhizosphere	RTAQTIPSDVASIRRGTLPKDTIQKLKEIEKLSKKLRSELNP*
Ga0075017_1011954441	3300006059	Watersheds	EADDLARLAQTIPTDVASVRKGMLPKDVIEKLRQIEKLSKRLRTELNP*
Ga0070715_100123793	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKHLRGELAP*
Ga0075426_108152941	3300006903	Populus Rhizosphere	ARTAQTIPSDVASIRRGTLPKDTIQKLKEIEKLSKKLRSELNP*
Ga0099795_105374001	3300007788	Vadose Zone Soil	RLAQTIPTDVANVRQGMLPKDVIQKLKQIEKLSKHLRNELIK*
Ga0099830_103272432	3300009088	Vadose Zone Soil	VKKLTSDVESVRKGMLPKDVLQKLKQIENLSKRLRSELNPKGTP*
Ga0116220_102253681	3300009525	Peatlands Soil	LLGLQKEAEDLARTAQTIPADMATVRKGTLPKDIIQKLKQIEKLSKHLRTQIAQ*
Ga0105237_127758252	3300009545	Corn Rhizosphere	QAQREADELARVAQTVPADVTKVREGMLPKDAIEKLKQIEKLSKRLRTELTQ*
Ga0116133_12108311	3300009623	Peatland	RTAQTIPLDVASVRKGMLPKDVIEKLKQIEKLSKRLRSELNP*
Ga0116126_10932233	3300009640	Peatland	KLHRDADELARVAQTIPPDVATIQKGLLPKDIIEKLKLIEKLSKQLRRQLSR*
Ga0126378_104100812	3300010361	Tropical Forest Soil	RIDSEKLQRDADDLARTAQTIPSDIANIHRGTLPKDTIQKLKEIEKLSKRLRTELNP*
Ga0126379_124576381	3300010366	Tropical Forest Soil	KDADDLARAAQTIPSDVADIRRGTLPKDTIQKLKEIEKLSKRLRSELNP*
Ga0134121_131271231	3300010401	Terrestrial Soil	QKEADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRGELAP*
Ga0126361_106870072	3300010876	Boreal Forest Soil	DELSRMSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP*
Ga0137776_12837662	3300010937	Sediment	RDAEELARTAQSIPTDVARVRKGMLPKDVIDKLKQIEKLSKRLRTELNP*
Ga0150983_156117032	3300011120	Forest Soil	DDLARTAQTIPSDVASLRKGMLPKDVIEKLKQIEKLSKHLRTELNP*
Ga0137391_113996611	3300011270	Vadose Zone Soil	READDLAKTAQSIPSDVESVRKGMLPKDVLQKLRQIEKLSKRLRSELNP*
Ga0137393_110360582	3300011271	Vadose Zone Soil	VIQLQREADDLAKTAQSIPSDVESVRKGMLPKDVLQKLKQIENLSKRLRSELNPKGTP*
Ga0137399_116940221	3300012203	Vadose Zone Soil	ADELAKAAQSVPADIQNIEKGVFPKDVIQKLKQIEKLSKHLRTELAP*
Ga0137380_115872441	3300012206	Vadose Zone Soil	PSDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP*
Ga0150985_1040423361	3300012212	Avena Fatua Rhizosphere	AQREADTLARMAQTIPADMTKIREGMLPKDVIEKLKQIEKMSKHLRGEITR*
Ga0137385_105335142	3300012359	Vadose Zone Soil	QTIPSDLANIRRGTLPKDTIQKLKEIEKLSKRLRSELNP*
Ga0137419_108664862	3300012925	Vadose Zone Soil	MRWTVRFSDADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRTELNP*
Ga0126375_103257201	3300012948	Tropical Forest Soil	TIPSDVANVRRGTLPKVTIQKLKEIEKLSKRLRSELNP*
Ga0164307_108368632	3300012987	Soil	VAQTVPADVTKVREGMLPKDAIEKLKQIEKLSKHLRSELTQ*
Ga0157378_119370512	3300013297	Miscanthus Rhizosphere	EADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRGELAP*
Ga0181537_108860062	3300014201	Bog	DELARIAQTIPADLAATQKGLLAKDLQAKLKQIEKLSKRLRSQLAP*
Ga0182019_106252031	3300014498	Fen	EADELARIAQTIPPDVASIQEGKLPKDMIGKLKQIEKLSKRLRSQINP*
Ga0182019_114076681	3300014498	Fen	RTAQTIPTDVASVRKGMLPKDVIQKLKQIEKLSKHLRGELTP*
Ga0181525_101030722	3300014654	Bog	READALARTAQTIPSDVASIRKGMLPKDAIEKLKQIEKLSKHLRAELNP*
Ga0181522_107264222	3300014657	Bog	DDLARTAQSIPSDVASVRKGLMPKDVIQKLKQIEKLSKQLRTKLNP*
Ga0182005_12071042	3300015265	Rhizosphere	EADELARMAQTVPADVTKVREGMLPKDAIEKLKQIERLSKHLRAQLNP*
Ga0182041_120882371	3300016294	Soil	AQLQKEADELARIAQTIPADVASVKKGMLPKDVIEKLKQIERLSKRLRSELTP
Ga0181507_13329712	3300016705	Peatland	QDADDLARIAQTIPNDAASIQKGMLPKDMIEKLKQIERLSKHLRGQISQ
Ga0187820_11865082	3300017924	Freshwater Sediment	QQEADDLARSAQPIPADMAAIRQGTLPKDIIEKLKRIEKLSKRLRSELNP
Ga0187819_104715011	3300017943	Freshwater Sediment	LVKLQQEADDLARSAQTIPADMAAIRQGTLPKDIIEKLKRIEKLSKRLRSELNP
Ga0187782_107158542	3300017975	Tropical Peatland	QREADDLAREAQTIPIDLASVRKGALPKDTIRKLKQIEKLSKHLRNELTP
Ga0187767_103502121	3300017999	Tropical Peatland	IPTDIAKVNQGMLPKDVIEKLKQIEKLSKRLRSEVTP
Ga0187804_100799061	3300018006	Freshwater Sediment	READDLARTAQTIPSDVADVRRGTLPKDIIQKLKQIEKLSKRLRSELNP
Ga0187804_105157772	3300018006	Freshwater Sediment	QTIPDDMTALRKGTLPKDLIEKLKRIEKLSKRLRSQVAP
Ga0187804_105456521	3300018006	Freshwater Sediment	RTAQTIPSGVANVSKGTLPKDVIEKLKQIERLSKHLRSELNP
Ga0187805_103055091	3300018007	Freshwater Sediment	QTIPADIISVRKGMLPKDVIEKLKQIEKLSKRLRGELNP
Ga0187867_105642272	3300018033	Peatland	IDMVQLQRDADDLSRTAQTIPADVANIRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0187858_108041491	3300018057	Peatland	ADDLARAAQTIPSDVANVRKGMLPKDVIEKLKQIEKLSKRLRAELNP
Ga0187772_101804051	3300018085	Tropical Peatland	ADDLARTAQTIPSDMANIDRGTLPKDTIQKLKEIEKLSKRLRSELNP
Ga0210395_103612093	3300020582	Soil	AKLRQDADELAKIAQTIPPDVSSIQKGLLPKDVIEKLKQIEKLSKQLRKQLSP
Ga0210401_100089027	3300020583	Soil	MAQTIPNDVASVRKGMLPKNVIEKLKQIEKLSKRLRTQLNL
Ga0210401_101635212	3300020583	Soil	MSQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP
Ga0210404_108638951	3300021088	Soil	TAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRSELAP
Ga0210400_102232592	3300021170	Soil	SRLAQSIPVDVQSIEKGMFPKDVVQKLKQIEKLSKHLRGELTP
Ga0210396_110263821	3300021180	Soil	ARTAESIPADVVSVRKGVLPKDTMEKLKQIEKLSKRLRSQLNP
Ga0210388_112656362	3300021181	Soil	QTIPSDVASVRKGILPKDVIEKLKQIEKLSKRLRSELTP
Ga0210388_114996131	3300021181	Soil	DELAKIAQTIPPDVSSIQKGLLPKDVIEKLKQIEKLSKQLRKQLSP
Ga0210389_101501461	3300021404	Soil	QIQKEADELARMAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0210383_100862582	3300021407	Soil	VQLQKDADDPARMAQTIPSDMADLRPGTLPKDVIRKLKQIEKLSKRLRSVISQ
Ga0210384_114313252	3300021432	Soil	QRDADDLARTAQTIPVDVASVRKGMLPKDVILKLKQIEKLSKHLRGELAP
Ga0210390_104248262	3300021474	Soil	QLQKEADELARTAQTIPSDVASIRKGILPKDVIEKLKQVEKLSRRLRTELNP
Ga0210398_100178582	3300021477	Soil	MSQTIPSDVASARKGMLPRDVIEKLKQIEKLSKRLRTELNP
Ga0210409_100470142	3300021559	Soil	LQHDADDLARTAQSIPTDVASVRQGMLPKDVIQKLKQIEKLSKRLRGELTP
Ga0213853_109440531	3300021861	Watersheds	LARTAQTIPADMASVRTGTLPKDIIQKLKQIEKLSKHLRTQIAH
Ga0242649_10001082	3300022509	Soil	DDLARTAQAIPGDVAGVRQGTLPKDIIEKLRRIEKLSKRLRSELNP
Ga0242659_10210711	3300022522	Soil	LQQEADDLARTAQAIPGDVAGVRQGTLPKDIIEKLRRIEKLSKRLRSELNP
Ga0242657_10005841	3300022722	Soil	KLSRLAQSIPVDVQSIEKGMFPKDVVQKLKQIEKLSKHLRGELTP
Ga0242654_100070792	3300022726	Soil	QREADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKHLRTELNP
Ga0207928_10245901	3300025494	Arctic Peat Soil	SDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNPR
Ga0207685_100311241	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EADDLARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKHLRGELAP
Ga0207699_110174352	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LARTAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRAELNP
Ga0207695_101305801	3300025913	Corn Rhizosphere	MAQTVPADVTKVREGMLPKDALEKLKQIEKLSKHLRAQLNP
Ga0207693_101771781	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AAQTIPSDVAKIRRGTLPKDTIQKLKEIEKLSKRLRSELNP
Ga0207702_109767672	3300026078	Corn Rhizosphere	RTAQTIPSDVASIRRGTLPKDTIQKLKEIEKLSKKLRSELNP
Ga0207702_110904302	3300026078	Corn Rhizosphere	ADTLARMAQTIPADMTKIREGMLPKDVIEKLKQIEKMSKHLRGELTY
Ga0209849_10743302	3300026215	Soil	LAQTIPTDVASIRQGKLPIDTIQKLKQIEKLSKRLRGELTP
Ga0209839_102150572	3300026294	Soil	RLQREADDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0209688_10687241	3300026305	Soil	AQREADELARMAQTVPADVTKVREGMLPKDAIEKLKQIERLSKHLRAQLNP
Ga0209377_11970852	3300026334	Soil	QKEADDLARMAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0209577_101790141	3300026552	Soil	LEQAQREADELARMAQTVPADVTKVREGMLPKDAIEKLKQIERLSKHLRAQLNP
Ga0209732_10218121	3300027117	Forest Soil	QLQKEADDLARTAQTIPTDLANVRKGMLPKDIVQKLKQIEKLSKHLRTELNP
Ga0209622_11014532	3300027502	Forest Soil	LARMAQTIPADVASVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0209009_11316761	3300027667	Forest Soil	LANAANSIPSDIESVRKGMLPKDVVRKLKQIEKLLKQLRNELNP
Ga0209248_100208883	3300027729	Bog Forest Soil	MRGDGVASVADEAEDLAATAQTIPTDVASVRKGMMPKDVLQKLKQIEKLSKHLRGELTP
Ga0209656_102549532	3300027812	Bog Forest Soil	LSRTAQTIPGDVANVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0209039_100043781	3300027825	Bog Forest Soil	ARIAQTIPPDVASIQKGKLPKDMIEKLKQIEKLSKQLRTQINP
Ga0209039_101738412	3300027825	Bog Forest Soil	ARIAQTIPPDVASIQKGKLPKDMIEKLKQIEKLSKQLRSQINP
Ga0209580_103632172	3300027842	Surface Soil	QTIPSDIANIRAGTLPKDTIQKLKEIEKLSKRLRSELNH
Ga0209167_107318992	3300027867	Surface Soil	DDLARTAQTIPSDMAGIRQGTLPKDMIDKLKRIEKLSKRLRSELNP
Ga0209067_106319482	3300027898	Watersheds	AQTIPSDVADVRRGTLPKDTIQKLKQIEKLSKRLRSELNP
Ga0209069_108284781	3300027915	Watersheds	VQLQRDADDLSRTAQTIPGDVANVRKGMLPKDVIEKLKQIEKLSKRLRTELNP
Ga0265338_100232293	3300028800	Rhizosphere	LTQLQKEADELARTAETIPSDITSIRKGMLPKDMIQKLKQIEKMSKHLRTELTP
Ga0265338_109860872	3300028800	Rhizosphere	LQKEADDLARTAQTIPSDLASVRKGMLPKDIVQKLKQIEKLSKHLRTELNP
Ga0311356_119348402	3300030617	Palsa	RQDADDLARIAQTIPLDVMSIQRGLLPKDMIDKLRQIEKLSKHLRDQIKP
Ga0265763_10101861	3300030763	Soil	SQTIPSDVASVRKGMLPRDVIEKLKQIEKLSKRLRTELNP
Ga0170834_1013802191	3300031057	Forest Soil	MARTAQTITSDVAGVRKGMLPKDVIEKLKQVEKLSKRLRTELTP
Ga0302325_100670831	3300031234	Palsa	DLARTAQTIPSDVASVRKGMLPKDVIDKLKQIEKLSKRLRTELNP
Ga0170820_108468802	3300031446	Forest Soil	EADDLARMAQTIPTDVASIRKGMLPKDVIEKLKQIEKLSKHLRTELNP
Ga0302326_125729121	3300031525	Palsa	DQLARIAQTIPPDVASIQEGKLPKDIIEKLKQIEKLSKRLRSQIQP
Ga0307476_101458692	3300031715	Hardwood Forest Soil	DELSKLAQTIPPDVADIRMGMLPKDVTQKLKQIEKLSKQLRGQLNP
Ga0307475_105246942	3300031754	Hardwood Forest Soil	AQLQKEADDLARTAESIPADVVSVRKGVLPKDTMEKLKQIEKLSKRLRSQLNP
Ga0316038_1000351	3300031868	Soil	RQDADELARIAQTIPPDVASIQRGLLPKDMSEKLKQIEKLSKRLRSQINP
Ga0307479_103649881	3300031962	Hardwood Forest Soil	DDLARTAQTIPSDVASVRKGMLPKDVIEKLKQIEKLSKRLRNELTP
Ga0311301_108422951	3300032160	Peatlands Soil	LLGLQKEAEDLARTAQTIPADMATVRKGTLPKDIIQKLKQIEKLSKHLRTQIAQ
Ga0307470_100762641	3300032174	Hardwood Forest Soil	QTIPSDVANVRKGVLPKDVIEKLKQIEKLSKRLRTELNP
Ga0306920_1004656131	3300032261	Soil	YSGRSMRKGVRPKDVIDKLKQIEKLSKRLRTELKP
Ga0335077_101458642	3300033158	Soil	MLAQTVPADIAKIRQGMLPKDVVQKLKQIEKLSKRLRSQLNP
Ga0371488_0059569_3_140	3300033983	Peat Soil	ELARIAQTIPPDVASIQQGKLPKDVIEKLKRIEKLCKRLRSQINP