Metagenome Family F072795

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072795
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	91 residues
Representative Sequence	MKELGNSIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGTRSPHKVKNSNAPAVKRDAEEDWGRYARIFRE
Number of Associated Samples	75
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.55 %
% of genes near scaffold ends (potentially truncated)	31.40 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (84.298 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.446 % of family members)
Environment Ontology (ENVO)	Unclassified (50.413 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.983 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.64% β-sheet: 0.00% Coil/Unstructured: 36.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00313	CSD	6.61
PF02663	FmdE	1.65
PF03330	DPBB_1	0.83
PF04226	Transgly_assoc	0.83
PF04191	PEMT	0.83
PF02796	HTH_7	0.83
PF07859	Abhydrolase_3	0.83
PF01590	GAF	0.83
PF00226	DnaJ	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2191	Formylmethanofuran dehydrogenase subunit E	Energy production and conversion [C]	1.65
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.83
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
All Organisms	root	All Organisms	15.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
cellular organisms	root	All Organisms → cellular organisms	15.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.09 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.44 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.65 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.13 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.48 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.65 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.48 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1.65 %
Alkalihalobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus	1.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.48 %
Alkalihalobacillus marmarensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus → Alkalihalobacillus marmarensis	1.65 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10057089	Not Available	1005	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10102976	Not Available	703	Open in IMG/M
3300004633\|Ga0066395_10041278	Not Available	1992	Open in IMG/M
3300004633\|Ga0066395_10976315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus → Alkalihalobacillus marmarensis	516	Open in IMG/M
3300005332\|Ga0066388_100602755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1721	Open in IMG/M
3300005332\|Ga0066388_101366423	Not Available	1227	Open in IMG/M
3300005332\|Ga0066388_101590699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1149	Open in IMG/M
3300005332\|Ga0066388_102849849	Not Available	884	Open in IMG/M
3300005332\|Ga0066388_104559748	Not Available	705	Open in IMG/M
3300005332\|Ga0066388_107947440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Alkalihalobacillus → Alkalihalobacillus marmarensis	530	Open in IMG/M
3300005332\|Ga0066388_108637134	Not Available	506	Open in IMG/M
3300005436\|Ga0070713_100497021	Not Available	1150	Open in IMG/M
3300005437\|Ga0070710_10320311	Not Available	1018	Open in IMG/M
3300005471\|Ga0070698_101363461	Not Available	660	Open in IMG/M
3300005713\|Ga0066905_101540846	Not Available	606	Open in IMG/M
3300005764\|Ga0066903_100753119	Not Available	1730	Open in IMG/M
3300005764\|Ga0066903_101076410	Not Available	1479	Open in IMG/M
3300005764\|Ga0066903_101216082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1400	Open in IMG/M
3300005764\|Ga0066903_101561833	Not Available	1249	Open in IMG/M
3300005764\|Ga0066903_104409784	Not Available	751	Open in IMG/M
3300005764\|Ga0066903_105011737	Not Available	702	Open in IMG/M
3300005764\|Ga0066903_105447191	Not Available	671	Open in IMG/M
3300005764\|Ga0066903_106102502	Not Available	630	Open in IMG/M
3300005764\|Ga0066903_107073054	Not Available	581	Open in IMG/M
3300005764\|Ga0066903_107769719	Not Available	552	Open in IMG/M
3300005764\|Ga0066903_109061977	Not Available	503	Open in IMG/M
3300006047\|Ga0075024_100073050	Not Available	1466	Open in IMG/M
3300006057\|Ga0075026_100498681	Not Available	701	Open in IMG/M
3300006163\|Ga0070715_10267375	Not Available	901	Open in IMG/M
3300007076\|Ga0075435_100305830	Not Available	1360	Open in IMG/M
3300009792\|Ga0126374_10327378	Not Available	1040	Open in IMG/M
3300009792\|Ga0126374_10887776	Not Available	689	Open in IMG/M
3300010043\|Ga0126380_11583543	Not Available	584	Open in IMG/M
3300010046\|Ga0126384_11198215	Not Available	700	Open in IMG/M
3300010048\|Ga0126373_10075859	Not Available	3050	Open in IMG/M
3300010048\|Ga0126373_11528588	Not Available	732	Open in IMG/M
3300010358\|Ga0126370_10261067	Not Available	1350	Open in IMG/M
3300010358\|Ga0126370_10646989	Not Available	920	Open in IMG/M
3300010358\|Ga0126370_11408541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300010359\|Ga0126376_10540075	Not Available	1089	Open in IMG/M
3300010359\|Ga0126376_10652982	Not Available	1004	Open in IMG/M
3300010360\|Ga0126372_10452653	Not Available	1190	Open in IMG/M
3300010360\|Ga0126372_11906647	Not Available	639	Open in IMG/M
3300010361\|Ga0126378_10079702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	3168	Open in IMG/M
3300010361\|Ga0126378_10400445	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300010362\|Ga0126377_10758509	Not Available	1026	Open in IMG/M
3300010362\|Ga0126377_11542266	Not Available	738	Open in IMG/M
3300010376\|Ga0126381_100149944	Not Available	3060	Open in IMG/M
3300010376\|Ga0126381_101400470	Not Available	1011	Open in IMG/M
3300010398\|Ga0126383_10045460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	3618	Open in IMG/M
3300010398\|Ga0126383_11413656	Not Available	786	Open in IMG/M
3300010863\|Ga0124850_1006491	Not Available	3681	Open in IMG/M
3300012948\|Ga0126375_10957372	Not Available	693	Open in IMG/M
3300012971\|Ga0126369_12888492	Not Available	563	Open in IMG/M
3300016270\|Ga0182036_10764670	Not Available	785	Open in IMG/M
3300016319\|Ga0182033_11301418	Not Available	653	Open in IMG/M
3300016341\|Ga0182035_10238698	Not Available	1461	Open in IMG/M
3300016371\|Ga0182034_10153880	Not Available	1731	Open in IMG/M
3300016387\|Ga0182040_10162059	Not Available	1607	Open in IMG/M
3300021168\|Ga0210406_10164133	Not Available	1860	Open in IMG/M
3300021168\|Ga0210406_10436207	Not Available	1045	Open in IMG/M
3300021560\|Ga0126371_10672178	Not Available	1184	Open in IMG/M
3300021560\|Ga0126371_10946604	Not Available	1004	Open in IMG/M
3300021560\|Ga0126371_11408123	Not Available	828	Open in IMG/M
3300021560\|Ga0126371_12373023	Not Available	641	Open in IMG/M
3300025915\|Ga0207693_10055682	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300027371\|Ga0209418_1057700	Not Available	691	Open in IMG/M
3300027874\|Ga0209465_10514856	Not Available	597	Open in IMG/M
3300027910\|Ga0209583_10039691	Not Available	1610	Open in IMG/M
3300027910\|Ga0209583_10450502	Not Available	625	Open in IMG/M
3300031545\|Ga0318541_10102654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1537	Open in IMG/M
3300031545\|Ga0318541_10560755	Not Available	639	Open in IMG/M
3300031546\|Ga0318538_10148026	Not Available	1239	Open in IMG/M
3300031564\|Ga0318573_10227094	Not Available	993	Open in IMG/M
3300031572\|Ga0318515_10157004	Not Available	1214	Open in IMG/M
3300031573\|Ga0310915_10238909	Not Available	1277	Open in IMG/M
3300031573\|Ga0310915_10255045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1234	Open in IMG/M
3300031573\|Ga0310915_10631875	Not Available	758	Open in IMG/M
3300031573\|Ga0310915_10981913	Not Available	590	Open in IMG/M
3300031668\|Ga0318542_10072421	Not Available	1615	Open in IMG/M
3300031736\|Ga0318501_10680174	Not Available	567	Open in IMG/M
3300031748\|Ga0318492_10210897	Not Available	996	Open in IMG/M
3300031753\|Ga0307477_10086146	Not Available	2180	Open in IMG/M
3300031763\|Ga0318537_10102332	Not Available	1061	Open in IMG/M
3300031765\|Ga0318554_10274851	All Organisms → cellular organisms → Bacteria → Proteobacteria	959	Open in IMG/M
3300031771\|Ga0318546_10278326	Not Available	1155	Open in IMG/M
3300031779\|Ga0318566_10264086	Not Available	853	Open in IMG/M
3300031780\|Ga0318508_1242521	Not Available	518	Open in IMG/M
3300031792\|Ga0318529_10131305	Not Available	1145	Open in IMG/M
3300031820\|Ga0307473_11160259	Not Available	572	Open in IMG/M
3300031833\|Ga0310917_10486490	Not Available	840	Open in IMG/M
3300031860\|Ga0318495_10434879	Not Available	576	Open in IMG/M
3300031879\|Ga0306919_10015611	All Organisms → cellular organisms → Bacteria	4449	Open in IMG/M
3300031879\|Ga0306919_10853545	Not Available	699	Open in IMG/M
3300031880\|Ga0318544_10405264	Not Available	530	Open in IMG/M
3300031890\|Ga0306925_10042005	All Organisms → cellular organisms → Bacteria	4732	Open in IMG/M
3300031890\|Ga0306925_11047490	Not Available	828	Open in IMG/M
3300031897\|Ga0318520_10783855	Not Available	598	Open in IMG/M
3300031910\|Ga0306923_10157779	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300031912\|Ga0306921_10352302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1721	Open in IMG/M
3300031912\|Ga0306921_10497605	Not Available	1417	Open in IMG/M
3300031912\|Ga0306921_11407376	Not Available	766	Open in IMG/M
3300031941\|Ga0310912_10455476	Not Available	997	Open in IMG/M
3300031942\|Ga0310916_10771129	Not Available	811	Open in IMG/M
3300031947\|Ga0310909_11258724	Not Available	596	Open in IMG/M
3300031954\|Ga0306926_11096900	Not Available	941	Open in IMG/M
3300031954\|Ga0306926_11316922	Not Available	842	Open in IMG/M
3300031962\|Ga0307479_10470189	Not Available	1241	Open in IMG/M
3300032001\|Ga0306922_11808697	Not Available	601	Open in IMG/M
3300032001\|Ga0306922_12378570	Not Available	506	Open in IMG/M
3300032035\|Ga0310911_10224225	Not Available	1073	Open in IMG/M
3300032042\|Ga0318545_10193121	Not Available	728	Open in IMG/M
3300032063\|Ga0318504_10256454	Not Available	824	Open in IMG/M
3300032063\|Ga0318504_10331827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	722	Open in IMG/M
3300032076\|Ga0306924_10971425	Not Available	934	Open in IMG/M
3300032090\|Ga0318518_10350301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	758	Open in IMG/M
3300032180\|Ga0307471_100506837	Not Available	1355	Open in IMG/M
3300032180\|Ga0307471_101088041	Not Available	965	Open in IMG/M
3300032205\|Ga0307472_101360985	Not Available	686	Open in IMG/M
3300032261\|Ga0306920_100711959	Not Available	1479	Open in IMG/M
3300032261\|Ga0306920_102660930	Not Available	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.87%
Aquatic	Environmental → Aquatic	3.31%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.87%
Sediment	Environmental → Aquatic → Sediment	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.90%
Loam	Environmental → Terrestrial → Soil → Loam	23.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.13%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100570892	3300000597	Forest Soil	MKELGNTIYWFGCAVAATLLGIGVADYWWGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSLDKVKNTNAPAAKREAEEDWRRYVRIFREH*
AF_2010_repII_A1DRAFT_101029762	3300000597	Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGQHELTAFLSWAVLAVIAWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYTTLRKKMEELEGLDG*
Ga0066395_100412785	3300004633	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAVIPWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYAALRKKMEELEGLDGQ*
Ga0066395_109763151	3300004633	Tropical Forest Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSLQKVKNTNAPAVKREAEEEEDWRRYARIFREHRAI*
Ga0066388_1006027553	3300005332	Tropical Forest Soil	VKDLGNTIYSFACVVAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLASLEAGRRTGSRFKNPNAPAVAEEDWGR*
Ga0066388_1013664232	3300005332	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPQKVKNSNAPALKRDAEEEWGRYARIFTDPVEGLDG*
Ga0066388_1015906993	3300005332	Tropical Forest Soil	MGNPGNTIYWFGCVVAATVLGIGVADYWFGNHRLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNPNAPA
Ga0066388_1028498492	3300005332	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGIFDYWFGDHHVTAFLSWAVLAAIPWLVGRASLYVLALGARSPHKVKNSNAPALKRDAEQDWARHARIFTDPGRELLPLD*
Ga0066388_1045597482	3300005332	Tropical Forest Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGAHSPHKVKNSNAPAVKRDAEEEDWARYARIFTDPPPREL*
Ga0066388_1079474401	3300005332	Tropical Forest Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGTRSPHKVKNSNAP
Ga0066388_1086371341	3300005332	Tropical Forest Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHQLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKREAEEDWRRYARIFREAHSQRPR*
Ga0070713_1004970213	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFALASLEAGIKVKNLNSPALQREAEED*
Ga0070710_103203112	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKDFGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFALASLEAGIKVKNLNSPALQREAEED*
Ga0070698_1013634612	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKDFGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFALASLEAGIKVKNLNSPALQREA
Ga0066905_1015408462	3300005713	Tropical Forest Soil	MGNSIHWFCCFVAATVLGIGVADYLFGEHRLTVFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNPNAPAVKREVEEDWGRYARLFRE*
Ga0066903_1007531192	3300005764	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGDHHVTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNSNALAPKRDAEEDWARYARIFTEPPPREL*
Ga0066903_1010764103	3300005764	Tropical Forest Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDRHLTAFLSWAVLAAIPWLVGRASLFVLALWARSPHKVKNSNAPSVKQDAEEDWGGYARVFRE*
Ga0066903_1012160822	3300005764	Tropical Forest Soil	MNGLGKTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAGLAVIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAKEEWGHYARIFTDPEWAMD*
Ga0066903_1015618332	3300005764	Tropical Forest Soil	MKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR*
Ga0066903_1044097842	3300005764	Tropical Forest Soil	TLLGIGVADYWWGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSLQKVKNTNAPAVKREAEEEEDWRRYARIFREHRAI*
Ga0066903_1050117371	3300005764	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGIADYWFGQHELTAFLSWAVLAVIAWLVGRASLFVLAVRARSPHKVKNSDAPALKRDAEEDWARYTALRKKMEELEGL
Ga0066903_1054471912	3300005764	Tropical Forest Soil	MGNPGNTIYWFCCVVAATVLGIGVADYLFGDHKLTAFLSWAVLAAIPWLVGRASLFVLALGALSPHNVKNPNAPAVKREVEEDWGRYARLFRE*
Ga0066903_1061025021	3300005764	Tropical Forest Soil	MKELGNTIYWFGCAVAATLLGIGVADYWWGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSLHKVKNTNAPAVKREAEEDWRRYARIFRERRAL*
Ga0066903_1070730541	3300005764	Tropical Forest Soil	MKDLGNTIYAFGCVVAATVLGLGVADYWFGQHQLIAFLFWAVLAAIPWLVGRASLYVLALGARSPQKVKNSNAPAVKPDAEEEWGHYARIFTTNRNGLDC*
Ga0066903_1077697191	3300005764	Tropical Forest Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDRHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEDWGRYARIFRE*
Ga0066903_1090619771	3300005764	Tropical Forest Soil	MKELANTIYWFGCVVAATVLGIGVVDYWFNDHKLTALLSWAVLAALPWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYT
Ga0075024_1000730503	3300006047	Watersheds	MKDLGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRTLLFVLASLEAGRRIGSNLNAPAVMREAEEDWGR*
Ga0075026_1004986812	3300006057	Watersheds	MKDFGNTIYAFGCVLAATVLGIGVADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFVLVSLEAGIKVKNLNSPALQREAEEDWGR*
Ga0070715_102673753	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLGKKIYSFGYVVAATVLVIGVADYWFGNHQLTAFLSWAVLATIPWLVGRASLFALASLEAGIKVKNLNSPALQREAEED*
Ga0075435_1003058302	3300007076	Populus Rhizosphere	MKDLDNTIYAFGCVAAATVLGIGFADYWFGHHQSTSFLSWAVLAAIPWLVGRASLFAPASLEAGIKVKNLNSPALQREAEED*
Ga0126374_103273782	3300009792	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAVIPWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYTALRKKMEELEGLDGQ*
Ga0126374_108877762	3300009792	Tropical Forest Soil	MGNSIHWFFCFVAATVLGIGVADYLFGEHRLTVFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNPNAPAVKREVEEDWGRYARLFRE*
Ga0126380_115835431	3300010043	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVAEYWFGDHHLTAFVSWAVLAAIPWLVDRASLFVLALGARSLHKVKNSNAPAVTRDAEEDWARYARIFTTNPSGLDC*
Ga0126384_111982151	3300010046	Tropical Forest Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGTRSPHKVKNSNALAVEQAAEEDWGRYARIFRE*
Ga0126373_100758594	3300010048	Tropical Forest Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEEDWARYARIFTDPPPREL*
Ga0126373_115285881	3300010048	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGQHELTAFLSWAVLAVIAWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEE
Ga0126370_102610672	3300010358	Tropical Forest Soil	VGHEILSFPINIIEGCVFGGPNMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR*
Ga0126370_106469893	3300010358	Tropical Forest Soil	MGNSIHWFCCFVAATVLGIGVADYLFGEHRLTVFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEDWGRYARIFRE*
Ga0126370_114085411	3300010358	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAVIPWLVGRASLFVLAVGARSPHKVKNSDAPALK
Ga0126376_105400751	3300010359	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAAIPWLVGRASLYVLALGARSLHEVKNSNAPALKPDAEEEWGRYARIFTDPQPSGLDC*
Ga0126376_106529822	3300010359	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAVIPWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYTALRKNMEELEGLDG*
Ga0126372_104526533	3300010360	Tropical Forest Soil	MGNSIHWFCCFVAATVLGIGVADYWFGDHHLTAFLSWAVLAAMPWLVGRASLFVLALGARSPHKVKNPNAPAVKREVEEDWGRYARLFRE*
Ga0126372_119066472	3300010360	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAVIPWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARY
Ga0126378_100797025	3300010361	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGQHELTAFLSWAVLAVIAWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYTALRKKMEELEGLDG*
Ga0126378_104004451	3300010361	Tropical Forest Soil	MGNSIHWFCCFVAATVLGIGVADYLLGEHRLTVFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNPNAPAVKREVEEDWGRYARLFRE*
Ga0126377_107585092	3300010362	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAVFPWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYAALRKKMEELEGLDG*
Ga0126377_115422661	3300010362	Tropical Forest Soil	CCFVAATVLGIGVADYLFGEHRLTVFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNPNAPAVKREVEEDWGRYARLFRE*
Ga0126381_1001499444	3300010376	Tropical Forest Soil	MGNSIHWFCCFVAATVLGIGVADYLLGENRLTVFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNPNAPAVKREVEEDWGRYARLFRE*
Ga0126381_1014004701	3300010376	Tropical Forest Soil	GCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPQKVKNSNAPALKRDAEEEWGRYARIFTDPVEGLDG*
Ga0126383_100454608	3300010398	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGQHELTAFLSWAVLAVIAWLVGRASLFVLAVGARSPHKVKNSEAPALKRNAEEDWARYTALRKKMEELEGLDG*
Ga0126383_114136561	3300010398	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGVADYWFGGHHLTAFLSWAVLAAIPWLVGRASLYVLALGARSLHEVKNSNAPALKPDAEEEWGRYARIFTDPQPSGLDC*
Ga0124850_10064917	3300010863	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGLFDHWFGGHHLTAFLSWAVLAVIPWLVGRASLFVLAVGARSPHKVKNSDAPALNAEEDWARYTALRKKMEELEGLDG*
Ga0126375_109573721	3300012948	Tropical Forest Soil	MKELGNSIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLVGRASLFVLALGTRSPHKVKNSNAPAVKRDAEEDWGRYARIFRE*
Ga0126369_128884921	3300012971	Tropical Forest Soil	MKELGNIICWFGCVVAATLLGIGVADYWFGGHHLTAFLSWAVLAVIPWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYAALRKKMEELEGLDGQ*
Ga0182036_107646701	3300016270	Soil	TLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0182033_113014182	3300016319	Soil	MKDLGNTIYAFGCVVAATVLGLGVADYWFGDHHLTAFLSWAVLAAIPWLLGRASLYVLALGARSPQKVKNSNAPAVKPDAEEEWGHYARIFTTNHNGLDC
Ga0182035_102386982	3300016341	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYGFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQNFY
Ga0182034_101538801	3300016371	Soil	MKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPKAPAVKREAEEDWGR
Ga0182040_101620592	3300016387	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYGFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0210406_101641333	3300021168	Soil	MKDIGNTIYGFSCVVAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFALASLEAGIKVKNLNSPALQREAEED
Ga0210406_104362071	3300021168	Soil	MKDFGNTIYSFGYVVAATVLGIGVADYWFGNHQLTAFLSWAVLATIPWLVGRASLYVLASLEAGRLHWLKVKNPNAPAVKREAEEDWGR
Ga0126371_106721783	3300021560	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPQKVKNSNAPALKRDAEEEWGRYARIFTDPVEGLDG
Ga0126371_109466043	3300021560	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLGIGVADYWFGQHELTAFLSWAVLAVIAWLVGRASLFVLAVGARSPHKVKNSDAPALKRDAEEDWARYTALRKKMEELEGLDG
Ga0126371_114081232	3300021560	Tropical Forest Soil	MKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0126371_123730231	3300021560	Tropical Forest Soil	IYWFGCVVAATLLGIGVADYWFGQHELTAFLSWAALAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEEDWARYARIFTDPPPREL
Ga0207693_100556824	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLGNTIYSFGCVVAATVLGIGVADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFALASLEAGIKVKNLNSPALQREAEED
Ga0209418_10577002	3300027371	Forest Soil	YSFGYVVAATVLGIGVADYWFGNHQLTAFLSWAVLATIPWLVGRASLFVLGGRSPHWVKIKNPNAPAVKREAEEDWGR
Ga0209465_105148561	3300027874	Tropical Forest Soil	VVAATLLVIGVADYWFGGHHLTAFLSWAVLAAIPWLVGRASLYVLALGARSLHKVKNSNAPALKPDAEEEWGRYARIFTDPVEGLDG
Ga0209583_100396912	3300027910	Watersheds	MKDLGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRTLLFVLASLEAGRRIGSNLNAPAVMREAEEDWGR
Ga0209583_104505022	3300027910	Watersheds	MKDFGNTIYAFGCVVAATVLGIGIADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFVLASLEAGIKVKNLNSPALQREAEEDWGR
Ga0318541_101026542	3300031545	Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGARPPHKVKNSNAPAVKRDAEEEDWARYARIFTDPPPREL
Ga0318541_105607551	3300031545	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKLDAEEEWGRYAQIFTDPVEGLDG
Ga0318538_101480263	3300031546	Soil	IEGCVFGGPNMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0318573_102270944	3300031564	Soil	NMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEHWGR
Ga0318515_101570042	3300031572	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0310915_102389093	3300031573	Soil	MKELGNIIYWFGSVVAATLLVIGVFDYWFGGHHLTTFLSWAVLAAIPWLVGRASLYVLALGARSLHKVKNSNAPALKPDAEEEWGRYARIFTDPPPREL
Ga0310915_102550451	3300031573	Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEEDWARYARIFTDPPPREL
Ga0310915_106318751	3300031573	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0310915_109819131	3300031573	Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLIGRASLFVLALGTRSPHKVTNSNAPAVKRDAAEDWGRYA
Ga0318542_100724214	3300031668	Soil	MKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEHWGR
Ga0318501_106801742	3300031736	Soil	MKVLGNTIYWFGCVVAATLLVIGVFDYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVLALGARSPHKVKNSNAPALKRDAEEDWARYTALRKKMEELEGLDG
Ga0318492_102108974	3300031748	Soil	IIEGCVFGGPNMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0307477_100861461	3300031753	Hardwood Forest Soil	KDFGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFALASLEAGIKVKNLNSPALQREAEED
Ga0318537_101023322	3300031763	Soil	MQDLGKRIYWAGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0318554_102748514	3300031765	Soil	IYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0318546_102783262	3300031771	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGSHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0318566_102640862	3300031779	Soil	VLVVRRGCGLPRVGHEILSFPINIIEGCVFGGPNMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0318508_12425211	3300031780	Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAVQEWGRYARIFTDPVEGLDG
Ga0318529_101313052	3300031792	Soil	LIGCAPPRVGHEILSFPINIIEGCVFGGPNMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0307473_111602591	3300031820	Hardwood Forest Soil	VKDFGNTIYSFSCVVAATVIGISFADYWFGRHQLTAFLSWAVLATIPWLVGRASLFVLGGRSPHWVKIKNPN
Ga0310917_104864901	3300031833	Soil	VAATLLVIGVFDYWFGSHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEE
Ga0318495_104348791	3300031860	Soil	SFPINIIEGCVFGGPNMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEHWGR
Ga0306919_100156114	3300031879	Soil	VFSGGPNMKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARYPNAPAVKREAEEDWGR
Ga0306919_108535451	3300031879	Soil	CVVAGTLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0318544_104052641	3300031880	Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGARPPHKVKNSNAPAVKRDAEEEEDW
Ga0306925_100420051	3300031890	Soil	VVAATLLVIGVFDYWFGGHHLTTFLSWAVLAAIPWLVGRASLYVLALGARSLHKVKNSNAPALKPDAEEEWGRYARIFTDPPPREL
Ga0306925_110474901	3300031890	Soil	MKDLGNTIYAFGCVVAATVLGLGVADYWFGQHQLIAFLSWAVLAAIPWLVGRASLYVLALGARSPQKVKNSNAPAVKPDAEEEWGHYARIFTTNHNGLDC
Ga0318520_107838552	3300031897	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYGFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNSNAPAVKRDAEEEDWARYARIFTDPPPREL
Ga0306923_101577796	3300031910	Soil	MKDLGNTIYRFSCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLIGRASLFVLALGTRSPHKVTNSNAPAVKRDAAEDWGRYA
Ga0306921_103523023	3300031912	Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLIGRASLFVLALGTRSPHKVTNSNAPAVKRDAEEDWGRYA
Ga0306921_104976053	3300031912	Soil	MKELGNIIYWFGSVVAATLLVIGVFDYWFGGHHLTTFLSWAVLAAIPWLVGRASLYVLALGARSLHKVKNSNAPALKPDAEEEWGRYARIFTDPPPREMDFLTWI
Ga0306921_114073762	3300031912	Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGARPPHKVKNSNAPAVKRDAEEEEDWAR
Ga0310912_104554763	3300031941	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGRHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0310916_107711292	3300031942	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGRHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKLDAEEEWGRYAQIFTDPVEGLDG
Ga0310909_112587242	3300031947	Soil	LGNIIYWFGSVVAATLLVIGVFDYWFGGHHLTTFLSWAVLAAIPWLVGRASLYVLALGARSLHKVKNSNAPALKPDAEEEWGRYARIFTDPPPREL
Ga0306926_110969001	3300031954	Soil	CVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQIFTDPVEGLDG
Ga0306926_113169222	3300031954	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWLGSHHLTAFLSWGVLAAIPWLVGRALLFVLALGARSPHKVKNSNAPAV
Ga0307479_104701892	3300031962	Hardwood Forest Soil	MKDFGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLFALASLEAGIKVKNLNSPALQREAEED
Ga0306922_118086971	3300032001	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLATIPWLVGRASLFVLALGARSPHKVKNSNAPAVKR
Ga0306922_123785702	3300032001	Soil	NIIYWFGCVVAATLLVIGVFDYWLGSHHLTAFLSWGVLAAIPWLVGRALLFVLALGARSPHKVKNSNAPAVKRDAEEEWGRYARIFTDPVEGLDG
Ga0310911_102242252	3300032035	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWGRYAQVFTDPVEGLDG
Ga0318545_101931211	3300032042	Soil	MKELGNIIYWFGSVVAATLLVIGVFDYWFGGHHLTTFLSWAVLAAIPWLVGRASLYVLALGARSLHKVKNSNAPALKPDAEEEWGRYARIFTDPPPREMDFLTW
Ga0318504_102564542	3300032063	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAPAVKRDAEEEWG
Ga0318504_103318272	3300032063	Soil	MKELGNTIYWFGCVVAATLLGIGVAEYWFGDHHLTAFLSWAVLAAIPWLVGRASLFVLALRTRSPHKVKNSNAPA
Ga0306924_109714251	3300032076	Soil	VLGNTIYWFGCVVAATLLVIGVFDYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVLALGARSPHKVKNSNAPALKRDAEEDWARYTALRKKMEELEGLDG
Ga0318518_103503011	3300032090	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHKVKNLNAP
Ga0307471_1005068373	3300032180	Hardwood Forest Soil	VKDFGNTIYSFSCVVAATVIGISFADYWFGRHQSTAFLSWAVLATIPWLVGRASLFVLGGRSPHWVKIKNPNAPAVKREAEEDWGR
Ga0307471_1010880412	3300032180	Hardwood Forest Soil	MKDFGNTIYAFSCVVAATVLGIGVADYWFGHHELTALLSWVVLATIPWLVGRASLYVLASLEVGRRTSDWKREAEEDRGR
Ga0307472_1013609852	3300032205	Hardwood Forest Soil	VKDFGNTIYSFSCVVAATVIGISFADYWFGRHQLTAFLSWAVLATIPWLVGRASLFVLGGRSPHWVKIKNPNAPAVKREAEEDWGR
Ga0306920_1007119593	3300032261	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWLGSHHLTAFLSWGVLAAIPWLVGRALLFVLALGARSPHKVKNSNAPAVKRDAEEEWGRYARIFTDPVEGLDG
Ga0306920_1026609303	3300032261	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTTFLSWAVLAAIPWLVGRASLYVLALGARSLHKVKNSNAPALKPDAEEEWGRYARIFTDPPPREL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072795

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences