Metagenome / Metatranscriptome Family F072780

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072780
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	72 residues
Representative Sequence	QIDATSGSGRAERVATYSDVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Number of Associated Samples	111
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.31 %
% of genes near scaffold ends (potentially truncated)	96.69 %
% of genes from short scaffolds (< 2000 bps)	95.04 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.645 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.876 % of family members)
Environment Ontology (ENVO)	Unclassified (24.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.587 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.68% β-sheet: 15.05% Coil/Unstructured: 75.27%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00903	Glyoxalase	9.09
PF00160	Pro_isomerase	6.61
PF04525	LOR	4.96
PF12681	Glyoxalase_2	4.13
PF05103	DivIVA	4.13
PF00294	PfkB	3.31
PF02548	Pantoate_transf	3.31
PF02518	HATPase_c	3.31
PF13472	Lipase_GDSL_2	2.48
PF12773	DZR	2.48
PF03928	HbpS-like	2.48
PF13240	zinc_ribbon_2	1.65
PF07883	Cupin_2	1.65
PF13742	tRNA_anti_2	1.65
PF00583	Acetyltransf_1	1.65
PF13191	AAA_16	1.65
PF02585	PIG-L	1.65
PF01887	SAM_HAT_N	1.65
PF00459	Inositol_P	0.83
PF00300	His_Phos_1	0.83
PF04545	Sigma70_r4	0.83
PF05231	MASE1	0.83
PF08241	Methyltransf_11	0.83
PF01553	Acyltransferase	0.83
PF01087	GalP_UDP_transf	0.83
PF10137	TIR-like	0.83
PF03631	Virul_fac_BrkB	0.83
PF07746	LigA	0.83
PF13650	Asp_protease_2	0.83
PF12706	Lactamase_B_2	0.83
PF00027	cNMP_binding	0.83
PF01741	MscL	0.83
PF01596	Methyltransf_3	0.83
PF13519	VWA_2	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	6.61
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	4.96
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	3.31
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	1.65
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.65
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.83
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.83
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.83
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.83
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.83
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.83
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.64 %
Unclassified	root	N/A	17.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.64 %
Unclassified	root	N/A	17.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.64 %
Unclassified	root	N/A	17.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.29 %
Unclassified	root	N/A	17.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.81 %
Unclassified	root	N/A	17.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.14 %
Unclassified	root	N/A	17.36 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Coriobacteriia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.09 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.96 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.83 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.83 %
Coriobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.96 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.83 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.83 %
Coriobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.96 %
Pimelobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter	0.83 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.83 %
Coriobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	4.96 %
unclassified Pimelobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → unclassified Pimelobacter	0.83 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.83 %
Coriobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.09 %
Streptomyces sp. ADI97-07	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI97-07	4.96 %
Pimelobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → unclassified Pimelobacter → Pimelobacter sp.	0.83 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.83 %
Coriobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725001\|GPWNP_F5MPXY301D12OM	Not Available	508	Open in IMG/M
2228664021\|ICCgaii200_c0718172	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1066858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300000956\|JGI10216J12902_116408782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300001361\|A30PFW6_1464504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300004156\|Ga0062589_101690574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales	631	Open in IMG/M
3300004463\|Ga0063356_104619222	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300004479\|Ga0062595_100923774	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300004643\|Ga0062591_102021506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300005171\|Ga0066677_10195749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300005181\|Ga0066678_10397868	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005327\|Ga0070658_11569974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300005336\|Ga0070680_101438050	Not Available	597	Open in IMG/M
3300005339\|Ga0070660_101006744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300005339\|Ga0070660_101260440	Not Available	627	Open in IMG/M
3300005439\|Ga0070711_101335696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300005439\|Ga0070711_101682038	Not Available	556	Open in IMG/M
3300005530\|Ga0070679_101367939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300005545\|Ga0070695_100920184	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005547\|Ga0070693_100063936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2146	Open in IMG/M
3300005549\|Ga0070704_101578709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → unclassified Pimelobacter → Pimelobacter sp.	605	Open in IMG/M
3300005560\|Ga0066670_10412694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300005560\|Ga0066670_10972094	Not Available	518	Open in IMG/M
3300005587\|Ga0066654_10595356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300005614\|Ga0068856_100068333	All Organisms → cellular organisms → Bacteria → Proteobacteria	3512	Open in IMG/M
3300005616\|Ga0068852_100795062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	960	Open in IMG/M
3300005764\|Ga0066903_107045895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300005874\|Ga0075288_1068961	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006032\|Ga0066696_10430323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300006046\|Ga0066652_100291397	Not Available	1446	Open in IMG/M
3300006046\|Ga0066652_101587680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300006163\|Ga0070715_10667850	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006175\|Ga0070712_100094936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2193	Open in IMG/M
3300006237\|Ga0097621_100262927	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300006358\|Ga0068871_100274805	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300006853\|Ga0075420_101601032	Not Available	558	Open in IMG/M
3300006854\|Ga0075425_102725612	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006904\|Ga0075424_100966095	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300006914\|Ga0075436_100123725	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300007076\|Ga0075435_100361656	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300009137\|Ga0066709_103012033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300009148\|Ga0105243_10064963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2930	Open in IMG/M
3300009162\|Ga0075423_10365693	Not Available	1513	Open in IMG/M
3300009174\|Ga0105241_11147992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734	Open in IMG/M
3300009174\|Ga0105241_12294119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300009177\|Ga0105248_11350709	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300009551\|Ga0105238_10475652	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300009840\|Ga0126313_11068396	Not Available	663	Open in IMG/M
3300009840\|Ga0126313_11122424	Not Available	647	Open in IMG/M
3300010321\|Ga0134067_10397415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300010336\|Ga0134071_10343375	Not Available	754	Open in IMG/M
3300010360\|Ga0126372_10019343	All Organisms → cellular organisms → Bacteria	3974	Open in IMG/M
3300010362\|Ga0126377_11140552	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300010366\|Ga0126379_11624695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300010376\|Ga0126381_100318425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2138	Open in IMG/M
3300010376\|Ga0126381_101880141	Not Available	864	Open in IMG/M
3300010396\|Ga0134126_10284931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1944	Open in IMG/M
3300010399\|Ga0134127_13258164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300010401\|Ga0134121_10341632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1337	Open in IMG/M
3300010937\|Ga0137776_1017514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300011119\|Ga0105246_12589124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300012204\|Ga0137374_10419264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1059	Open in IMG/M
3300012351\|Ga0137386_11042208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300012356\|Ga0137371_11106623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300012358\|Ga0137368_10155270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1685	Open in IMG/M
3300012532\|Ga0137373_10193208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300012901\|Ga0157288_10417792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300012915\|Ga0157302_10407501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300012955\|Ga0164298_11376463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300012960\|Ga0164301_11144212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300012972\|Ga0134077_10503043	Not Available	537	Open in IMG/M
3300012985\|Ga0164308_12067564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300012987\|Ga0164307_11324117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300012988\|Ga0164306_10693496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300012988\|Ga0164306_10962375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300012989\|Ga0164305_10244966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1291	Open in IMG/M
3300013307\|Ga0157372_11578628	Not Available	755	Open in IMG/M
3300013308\|Ga0157375_13730107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300013764\|Ga0120111_1038765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300013770\|Ga0120123_1014993	Not Available	1525	Open in IMG/M
3300014052\|Ga0120109_1031852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300014150\|Ga0134081_10153200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300014157\|Ga0134078_10550046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	545	Open in IMG/M
3300014488\|Ga0182001_10197596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300015356\|Ga0134073_10402944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300015372\|Ga0132256_103269940	Not Available	545	Open in IMG/M
3300016387\|Ga0182040_10408839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI97-07	1067	Open in IMG/M
3300018466\|Ga0190268_11954140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300021078\|Ga0210381_10202136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300022756\|Ga0222622_10536702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300024179\|Ga0247695_1071387	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300024232\|Ga0247664_1134179	Not Available	579	Open in IMG/M
3300025898\|Ga0207692_10110082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1526	Open in IMG/M
3300025909\|Ga0207705_11240705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300025911\|Ga0207654_10697288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300025916\|Ga0207663_10408552	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300025917\|Ga0207660_11271498	Not Available	598	Open in IMG/M
3300025919\|Ga0207657_11017397	Not Available	635	Open in IMG/M
3300025924\|Ga0207694_10756388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300025928\|Ga0207700_10430930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1160	Open in IMG/M
3300026308\|Ga0209265_1221509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300026312\|Ga0209153_1261029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300026315\|Ga0209686_1200009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300028713\|Ga0307303_10123233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300028720\|Ga0307317_10216418	All Organisms → cellular organisms → Bacteria → Terrabacteria group	647	Open in IMG/M
3300028784\|Ga0307282_10248142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300028784\|Ga0307282_10615588	Not Available	527	Open in IMG/M
3300028819\|Ga0307296_10662417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300028828\|Ga0307312_10811784	All Organisms → cellular organisms → Bacteria → Terrabacteria group	620	Open in IMG/M
3300028828\|Ga0307312_10815418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300030905\|Ga0308200_1056593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300031668\|Ga0318542_10656454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI97-07	548	Open in IMG/M
3300031798\|Ga0318523_10404208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI97-07	678	Open in IMG/M
3300031860\|Ga0318495_10069661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI97-07	1567	Open in IMG/M
3300031879\|Ga0306919_11127533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI97-07	597	Open in IMG/M
3300031938\|Ga0308175_101679617	Not Available	711	Open in IMG/M
3300031943\|Ga0310885_10394697	All Organisms → cellular organisms → Bacteria → Terrabacteria group	736	Open in IMG/M
3300031947\|Ga0310909_10832863	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300032013\|Ga0310906_11133368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300032043\|Ga0318556_10518930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300033290\|Ga0318519_10573576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI97-07	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.69%
Host-Associated	Host-Associated	22.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.21%
Plants	Host-Associated → Plants	22.31%
Aquatic	Environmental → Aquatic	2.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.48%
Roots	Host-Associated → Plants → Roots	1.65%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.16%
Loam	Environmental → Terrestrial → Soil → Loam	13.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.22%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.48%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.48%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725001	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWNP_02547970	2067725001	Soil	VVTYADLSAGEWGIIVDPRGWLSIIRGNPENAAAGLGGVQPGDPIWLNAAR
ICCgaii200_07181721	2228664021	Soil	VESGVGGQDGVVQIDATSGSASARRVSTYGDVESGEWGLIIDPRGWALVIRGNPANAAEGLGSVAPGDPIWLTTARD
AP72_2010_repI_A001DRAFT_10668581	3300000893	Forest Soil	AAGLDRADAVAIDATGGSATARRVTTYTDVASGDWGLIVDPRGWLCVIRGNPANAAEGLGGVQPGDPIWLTVPRKTVVSAA*
JGI10216J12902_1164087821	3300000956	Soil	ACRSCARRGGDATSGSGRAERVATYSDVESGDWVLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
A30PFW6_14645041	3300001361	Permafrost	NVLLNVTAEDFEAAGLDHEEAVAIDATSGSATASRVSTYTDVETGDWGLIIDPRGWLSVIRGNPANAAEGLGGVQPGDPIWLTAPRVATRPAG*
Ga0062589_1016905743	3300004156	Soil	ERVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0063356_1046192221	3300004463	Arabidopsis Thaliana Rhizosphere	LVESGVGQDGVVQIDATSGSASARRVSTYGDVESGEWGLIIDPRGWALVIRGNPANAAEGLGSVAPGDPIWLTTARE*
Ga0062595_1009237741	3300004479	Soil	RRVSTYGDVESGEWGLIIDPRGWALVIRGNPANAAEGLGSVAPGDPIWLTTARE*
Ga0062591_1020215061	3300004643	Soil	AETIQIDATSGSGRAERVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0066677_101957493	3300005171	Soil	LTYADVASGDWGLIVDPRGWLLVVRGNPANAAEGLDSVAPGDPIWLTAARD*
Ga0066678_103978683	3300005181	Soil	SATARRVSTYTDVPPGDWGLIIDPRGWLSVIRGNPGNAAEGLGGVQPGDPIWLTAPRASARTAA*
Ga0070658_115699741	3300005327	Corn Rhizosphere	LNRFGNVLLNVRAQHVADAGLDGADAVQVDATSGSAAAHWVSTYADVASGDWGLIIDPRGWVLVIRGNPANAAEGLGSVGSGDPIWLTAARA*
Ga0070680_1014380501	3300005336	Corn Rhizosphere	STYSDVESGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0070660_1010067441	3300005339	Corn Rhizosphere	ARKVSTYTDVQPGAWGLIVDPRGWLCVIRGNPANAAEGLGGVQPGDPIWLTAPRPLS*
Ga0070660_1012604401	3300005339	Corn Rhizosphere	NVRESQLIESGLGDGAAIQVDATSGAGRAQCVSTYSDVASGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARN*
Ga0070711_1013356963	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	NVTAEDYTSAGLDDAEAVAIDATTGSATARRVSTYTDVESGDWGLIIDPRGWLSVIRGNPANAAEGLGGVQPGDPIWLTVPRGSTRSAT*
Ga0070711_1016820381	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LNVRTSHVASAGLDQATTVEIAATSGTARAQWGSTYADVTPGGWGLIIDPRGWVLVVRANPGNAAADLGGVGPGDPIWLTAAPH*
Ga0070679_1013679393	3300005530	Corn Rhizosphere	VATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0070695_1009201841	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ESGLEGADAIQVDATSGSGRAAWVSTYSDVESGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0070693_1000639364	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	FGNVLLNVREPQLAESGLEEADAIQIDATSGSGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV*
Ga0070704_1015787092	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LVESGLDGADAIQIDATSGSGRAERVATYADVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0066670_104126941	3300005560	Soil	LLNVREPQLTESGLAGAGEIQVDATSGSGRARRVSTYADVESGDWGLIVDPRGWLQVVRGNPANAAEGLGSVGPGDPIWLTAAGDQIGGVG*
Ga0066670_109720941	3300005560	Soil	SQLAAAGLDEAEEIQVDATSGAGRARRVATYADVASGDWGLIVDPRGWLSVVRGNPANAAEGLGSVAPGDPIWLTAGR*
Ga0066654_105953561	3300005587	Soil	GAGEIQVDATSGSGRARRVSTYADVESGDWGLIVDPRGWLQVVRGNPANAAEGLGSVGPGDPIWLTAAGDQIGGVG*
Ga0068856_1000683335	3300005614	Corn Rhizosphere	EADLAASGLGDDGPVQIDATSGSARARLVSTYADVESGAWGLIVDPRGWALVIRGNPANAAEGLGGVAPGDPIWLTTPRD*
Ga0068852_1007950621	3300005616	Corn Rhizosphere	LLNVRESDLVESGVGQDGVVQIDATSGSASARRVSTYGDVESGEWGLIVDPRGWALVIRGNPANAAEGLGSVAPGDPIWLTTARD*
Ga0066903_1070458951	3300005764	Tropical Forest Soil	TDIASGDWGLIVDPRGWLCVIRGNPANAAEGLGGVQPGDPIWLTAPRAAARSAA*
Ga0075288_10689612	3300005874	Rice Paddy Soil	DLAASGFGDDGPVQIDATSGSASAKRVSTYADVDPGQWGVMVDPRGWASIIRGNPANAAEGLGGVAPGDPIWLTTPRD*
Ga0066696_104303231	3300006032	Soil	ESQLAESGLDGAGEIQVDATSGSGRARRVSTYADVASGDWGLIVDPRGWLQVVRGNPANAAEGLGSVGPGDPIWLTAATDQTGGVG*
Ga0066652_1002913971	3300006046	Soil	IQVDATSGSGRAQYVSTYADVEAGSWGVIVDPREWLLVIRGNPANAAEGLGGVSPGDPIWLTAARD*
Ga0066652_1015876801	3300006046	Soil	GAGEIQVDATSGAGRARRVSTYADVESGDWGLIVDPRGWLSVVRGNPANAAEGLGSVAPGDPIWLTAPR*
Ga0070715_106678502	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	DAMSGSARARRVSTYIDVDSGDWGLIVDPRGWLSVIRGNPANAAAGLGVQPGDPVWLTGPPDAA*
Ga0070712_1000949361	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LNRFGNVLLNVTAADYASAGLDEEEAVAIDATTGSATARRVSTYTDVDSGDWGLIIDPRGWLSVIRGNPANAAEGLGGVQPGDPIWLTVPRGSTRSAT*
Ga0097621_1002629273	3300006237	Miscanthus Rhizosphere	LDLNRFGNVLLNVREADLAASGLGDDGPVQIDATSGSARARLVSTYADVESGAWGLIVDPRGWALVIRGNPANAAEGLGGVAPGDPIWLTTPRD*
Ga0068871_1002748053	3300006358	Miscanthus Rhizosphere	ATADDLESAGLDTVPIIGIDAMSGSARARRVSTYIDVDSGDWGLIVDPRGWLSVIRGNPANAAAGLGIQPGDPVWLTGPPDAA*
Ga0075420_1016010321	3300006853	Populus Rhizosphere	SGSARARRVLTYADLSAGEWGIIVDPRGWLSIIRGNPENAAAGLGGVQPGDPIWLQARES
Ga0075425_1027256122	3300006854	Populus Rhizosphere	GSARAQRVSTYGDVESGEWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTARD*
Ga0075424_1009660952	3300006904	Populus Rhizosphere	GNVLLNVREPQLAESGLEEADAIQIDATSGSGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV*
Ga0075436_1001237251	3300006914	Populus Rhizosphere	AESGLEEADAIQIDATSGSGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV*
Ga0075435_1003616563	3300007076	Populus Rhizosphere	DATSGSARAERVSTYADVESGEWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTPRD*
Ga0066709_1030120332	3300009137	Grasslands Soil	ADSVGATSGSRGRRILSPHADVEAGNWGVIVDPREWLLVIRGNPANAAEGLGGVSPGDPIWLTAARD*
Ga0105243_100649631	3300009148	Miscanthus Rhizosphere	VLLNVREPQLAESGLEEADAIQIDATSGSGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV*
Ga0075423_103656934	3300009162	Populus Rhizosphere	ATSGSGRARRVATYADVRSGDWGLIVDPRGWLSVVRGNPANAAEGLGSVAPGDPIWLTAAGR*
Ga0105241_111479922	3300009174	Corn Rhizosphere	LLNVREADLAASGLGEDGDVQIDATSGSARAQRVSTYGDVESGEWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTARD*
Ga0105241_122941191	3300009174	Corn Rhizosphere	VQIDATSGSARARLVSTYADVESGAWGLIVDPRGWALVIRGNPANAAEGLGGVAPGDPIWLTAPRD*
Ga0105248_113507091	3300009177	Switchgrass Rhizosphere	RARLDQAPFDVESGEWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTPRD*
Ga0105238_104756523	3300009551	Corn Rhizosphere	LNVREADLAASGLGEDGDVQIDATSGSARAQRVSTYGDVESGEWGLIVDPRGWALVIRGNPANAAEGLGGGGPGDPVWLTTARD*
Ga0126313_110683961	3300009840	Serpentine Soil	DLNRFGNVLLNVRPSDLATSRLEQAAAVQVDAVSGSARARWVSTYADVDSGEWGLIIDPRGWVSVIRGNPANAAEGLGSVGPGDLIWLTASRT*
Ga0126313_111224242	3300009840	Serpentine Soil	SGRARHVATYADVPSGDWGVIVDPRGWLLVIRGNPANAAEGLGGVSSGDPIWLTAAAN*
Ga0134067_103974151	3300010321	Grasslands Soil	DQAQAIQVDATSGSGRARYVSTYADVEAGNWGVIVDPREWLLVIRGNPANAAEGLGGVSPGDPIWLTAARD*
Ga0134071_103433751	3300010336	Grasslands Soil	ADVAAGDWGLIVDPRGWLAVIRGNPANAAEGLGGVPPGDPIWLTLPREAARTAA*
Ga0126372_100193437	3300010360	Tropical Forest Soil	ATSGSGRAHHVSTYADVCAGEWGIIVDPRGWLLVIRGNPGNAAEGLGNVGSGDPIWLTEARD*
Ga0126377_111405523	3300010362	Tropical Forest Soil	DSTGGSATARKVSTYTDVQPGDWGLIVDPRGWLCVIRGNPANAAEGLGGVGPGDPVWLTTPRD*
Ga0126379_116246952	3300010366	Tropical Forest Soil	TVEINATSGGARAHWGATYADVEPGGWGMIVDPRGWALVIRGNPDNAADGLGGVGPGDPIWLTAERG*
Ga0126381_1003184255	3300010376	Tropical Forest Soil	STYTDVVSGDWGLIVDPRGWLSVIRGNPANAAEGLGGVEPGDPIWLTVPRAAARTAA*
Ga0126381_1018801413	3300010376	Tropical Forest Soil	STYTDVVSGDWGLIVDPRGWLCVIRGNPANAAEGLGGVQPGDPIWLTVPRAAARSAA*
Ga0134126_102849311	3300010396	Terrestrial Soil	LAESGLEEADAIQIDATSGSGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV*
Ga0134127_132581641	3300010399	Terrestrial Soil	GRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV*
Ga0134121_103416323	3300010401	Terrestrial Soil	SGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV*
Ga0137776_10175142	3300010937	Sediment	QIDSTAGSARARWVTTYADLADDDWGIIVDPRGRLLVIRANPGNAAEGLGNVTSGDSIWLTDAGN*
Ga0105246_125891242	3300011119	Miscanthus Rhizosphere	ASGLGDDGPVQIDATSGSARARLVSTYADVESGAWGLIVDPRGWALVIRGNPANAAEGLGGVAPGDPIWLTTPRD*
Ga0137374_104192642	3300012204	Vadose Zone Soil	GGEIQVDSACGSGRARHVSTYADVESGDWGVIVDPRGWLLVIRGNPANAAEGLGGVASGDPIWLTVAGS*
Ga0137386_110422082	3300012351	Vadose Zone Soil	ELAGLDAAPDVSIDATSGSAHARRVSTYTDVEPGDWGLIVDPRGWLCVIRGNPANAAEGLGGVQPGDPIWLTVPRDLAARSTA*
Ga0137371_111066231	3300012356	Vadose Zone Soil	NVRESQLAEAGLHGAGEIQVDATSGAGRARRVSTYADVESGDWGLIVDPRGWLSVVRGNPANAAEGLGSVAPGDPIWLTAPRE*
Ga0137368_101552703	3300012358	Vadose Zone Soil	GLEGGEIQVDSACGSGRARHVSTYADVESGDWGVIVDPRGWLLVIRGNPANAAEGLGGVASGDPIWLTAAGS*
Ga0137373_101932081	3300012532	Vadose Zone Soil	EAGLEGGEIQVDSACGSGRARHVSTYADVESGDWGVIVDPRGWLLVIRGNPANAAEGLGGVASGDPIWLTAAGS*
Ga0157288_104177922	3300012901	Soil	SATDRTIDSLTSGYSVADAIQIDATSGSGRAERVATYADVKAGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0157302_104075012	3300012915	Soil	GLGEDGAVQIDATSGSARAERVSTYADVESGEWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTPRD*
Ga0164298_113764632	3300012955	Soil	NVRESQLVESGLDKAEAIQIDATSGTARAERVATSADVAAGVWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0164301_111442122	3300012960	Soil	TTGSGRAEWVSTYSDVASGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0134077_105030431	3300012972	Grasslands Soil	AVDATSGSATARRVSTYADLAPNDWGIIVDPRGWMSVVRGNPGNAAAGLGNVAPGDPIWLGIPR*
Ga0164308_120675641	3300012985	Soil	LNRFGNVLLNVRESELVESGLDGADAIQIDATSGSGRAERVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0164307_113241172	3300012987	Soil	GRAERVATYADVESGAWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0164306_106934963	3300012988	Soil	ARLVSTYADVESGAWGLIVDPRGWALVIRGNPANAAEGLGGVAPGDPIWLTTPRD*
Ga0164306_109623751	3300012988	Soil	GSGRAEWVSTYSDVASGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0164305_102449663	3300012989	Soil	EWVSTYSDVESGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0157372_115786282	3300013307	Corn Rhizosphere	VDATSGSGRAAWVSTYSDVESGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0157375_137301071	3300013308	Miscanthus Rhizosphere	IQIDATSGSGRAERVATYADVESGAWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD*
Ga0120111_10387655	3300013764	Permafrost	MTASRVSTYTDVETGDWGLIIDPRGWLSVIRGNPANAAEGLGGVQPGDPIWLTAPRVATRPAG*
Ga0120123_10149931	3300013770	Permafrost	VETGDWGLIIDPRGWLSVIRGNPANAAEGLGGVQPGDPIWLTAPRLATRPAG*
Ga0120109_10318524	3300014052	Permafrost	LGNVLLNVTTEDFAAAGLDHEEAVAIDATSGSATASRVSTYTDVETGDWGLIIDPRGWLSVIRGNPANAAEGLGGVQPGDPIWLTAPRVATRPAG*
Ga0134081_101532002	3300014150	Grasslands Soil	GFDGATEVAIDATSGGAYARRVSTYADVAAGDWALIVDPRGWLAVIRGNPANAAEGLGGVQPGDPIWLTLPREAARTAA*
Ga0134078_105500461	3300014157	Grasslands Soil	LLNVREPQLAEARLDQAASIQVDSTSASGRAQRVSTYGDVEAGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTASRD*
Ga0182001_101975962	3300014488	Soil	FGNVLLNVREAQLAAAGLDGADEIQVDATSGAGQARRVATYADVASGDWGLLVDPRGWLSVVRGNPANAAEGLGSVAPGDPIWLTAGR*
Ga0134073_104029442	3300015356	Grasslands Soil	GNVLLNVRKSQLLEAGLDQAQAIQVDATSGSGRARYVSTYADVEAGNWGVIVDPREWLLVIRGNPANAAEGLGGVSPGDPIWLTAARD*
Ga0132256_1032699401	3300015372	Arabidopsis Rhizosphere	AAGLDKAPAVQVDATSGSATARWATTYADLASGDWGLIVDPRGWALVIRGNPANAAEGLGSVSSGDPIWLTVPRA*
Ga0182040_104088391	3300016387	Soil	IQVDSTAGSACARWVTTYADLAADDRGIIVDPRGRLLVIRGNPGNAAEGLGNVTSGDPIWLTPARA
Ga0190268_119541401	3300018466	Soil	LQTQSTFGQGSARGFKRVSTYADLAEGEWGLIVDPRGWLSVIRGNPANAAAGLGVGNDDLVWLSRERD
Ga0210381_102021361	3300021078	Groundwater Sediment	GSGRAERVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0222622_105367023	3300022756	Groundwater Sediment	NVRRKVRESQLVESGLDGADAIQIDATSGSGRAERVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0247695_10713871	3300024179	Soil	SGLEGAGAIQVDATSGSGRAEWVSTYSDVASGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0247664_11341792	3300024232	Soil	WGSTYADVTPGGWGLIIDPRGWVLVVRANPGNAAADLGGVGPGDPIWLTAAPH
Ga0207692_101100821	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AIQIDATSGSGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV
Ga0207705_112407052	3300025909	Corn Rhizosphere	LNRFGNVLLNVRAQHVADAGLDGADAVQVDATSGSAAAHWVSTYADVASGDWGLIIDPRGWVLVIRGNPANAAEGLGSVGSGDPIWLTAARA
Ga0207654_106972881	3300025911	Corn Rhizosphere	LNVREADLAASGLGEDGDVQIDATSGSARAQRVSTYGDVESGEWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTARD
Ga0207663_104085521	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NATADDLESAGLDTVPIIGIDAMSGSARARRVSTYIDVDSGDWGLIVDPRGWLSVIRGNPANAAAGLGIQPGDPVWLTGPPDAS
Ga0207660_112714981	3300025917	Corn Rhizosphere	STYSDVESGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0207657_110173971	3300025919	Corn Rhizosphere	LLNVRESQLIESGLGDGAAIQVDATSGAGRAQCVSTYSDVASGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARN
Ga0207694_107563881	3300025924	Corn Rhizosphere	GQDGVVQIDATSGSASARRVSTYGDVESGEWGLIIDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTARD
Ga0207700_104309301	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSTYADVESGAWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTARD
Ga0209265_12215092	3300026308	Soil	ATSGSGRARYVSTYADVEAGNWGVIVDPREWLLVIRGNPANAAEGLGGVSPGDPIWLTAARD
Ga0209153_12610291	3300026312	Soil	LNVRASQLAESGLEAAGAIQVDATSGSGRAEWVSTYSDVESGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARN
Ga0209686_12000091	3300026315	Soil	RFGNVLLNVREAQLIQAGLDGADEIQVDATSGAGRARRVATYADVASGDWGLIVDPRGWLSVVRGNPANAAEGLGSVAPGDPIWLTAGGH
Ga0307303_101232333	3300028713	Soil	QIDVTSGSGRAQRVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0307317_102164181	3300028720	Soil	QIDATSGSGRAERVATYSDVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0307282_102481421	3300028784	Soil	DATSGSGRARYVSTYADVESGNWGVIVDPREWLLVIRGNPANAAEGLGGVGPGDPIWLTAARD
Ga0307282_106155881	3300028784	Soil	MIPEPTVERAKIECEVLDLNRFGNVLLNVRESQLVESGLDGADAIQIDAKSGSGRAERVATYSDARGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0307296_106624171	3300028819	Soil	DAIQIDATSGSGRAERVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0307312_108117842	3300028828	Soil	RAERVATYADVESGDWGIIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0307312_108154182	3300028828	Soil	FGNVLLNVRESQFVESGLDGADAIQIDATSGSGRAQRVATYADVESGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAARD
Ga0308200_10565931	3300030905	Soil	ATSGSGRARYVSTYADVESGNWGVIVDPREWLLVIRGNPANAAEGLGGVGPGDPIWLTAARD
Ga0318542_106564542	3300031668	Soil	SGLAQAGAIQVDSTAGSACARWVTTYADLAADDWGIIVDPRGRLLVIRGNPGNAAEGLGNVTSGDPIWLTPARA
Ga0318523_104042081	3300031798	Soil	VEHGKIVCEVLDLNRFGNVLLNVREPDLAGSGLAQAGAIQVDSTAGSACARWVTTYADLAADDWGIIVDPRGRLLVIRGNPGNAAEGLGNVTSGDPIWLTPARA
Ga0318495_100696611	3300031860	Soil	WVTTYADLAADDWGIIVDPRGRLLVIRGNPGNAAEGLGNVTSGDPIWLTPARA
Ga0306919_111275332	3300031879	Soil	NVLLNVREPDLAGSGLAQAGAIQVDSTAGSACARWVTTYADLAADDWGIIVDPRGRLLVIRGNPGNAAEGLGNVTSGDPIWLTPARA
Ga0308175_1016796171	3300031938	Soil	VLLNVRAQHVADAGLDGADAVQVDATSGSAAAHWVSTYADVASGDWGLIIDPRGWVLVIRGNPANAAEGLGSVGSGDPIWLTAARA
Ga0310885_103946972	3300031943	Soil	ESGLEEADAIQIDATSGSGRAGWVSTYSDVASGDWGLIVDPRGWLLVIRGNPANAAEGLGSVSPGDPIWLTAV
Ga0310909_108328631	3300031947	Soil	MGSGRARHVSTYADVEAGDWGIIVDPRGWLLVIRGNPGNAAEGLGNVGSGDPIWLTEARD
Ga0310906_111333682	3300032013	Soil	QDGAVQIDATSGSARAERVSTYADVESGEWGLIVDPRGWALVIRGNPANAAEGLGGVGPGDPVWLTTPRD
Ga0318556_105189301	3300032043	Soil	FGNVLLNVRESHLRDSGLDRAEAVQVDATMGSGRARHVSTYADVEAGDWGIIVDPRGWLLVIRGNPGNAAEGLGNVGSGDPIWLTEARD
Ga0318519_105735762	3300033290	Soil	DLDRAGSGLAQAGAIQVDSTAGSACARWVTTYADLAADDWGIIVDPRGRLLVIRGNPGNAAEGLGNVTSGDPIWLTPARA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072780

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences