Metagenome Family F072721

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072721
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	45 residues
Representative Sequence	VSAVFVVVSLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Number of Associated Samples	84
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.67 %
% of genes near scaffold ends (potentially truncated)	20.66 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.595 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (20.661 % of family members)
Environment Ontology (ENVO)	Unclassified (28.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.934 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.41% β-sheet: 0.00% Coil/Unstructured: 44.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13466	STAS_2	42.15
PF11706	zf-CGNR	33.06
PF13302	Acetyltransf_3	3.31
PF00072	Response_reg	2.48
PF13090	PP_kinase_C	2.48
PF08281	Sigma70_r4_2	1.65
PF01471	PG_binding_1	1.65
PF00005	ABC_tran	1.65
PF02504	FA_synthesis	0.83
PF01195	Pept_tRNA_hydro	0.83
PF00207	A2M	0.83
PF00353	HemolysinCabind	0.83
PF01850	PIN	0.83
PF16576	HlyD_D23	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0193	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0416	Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)	Lipid transport and metabolism [I]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.60 %
Unclassified	root	N/A	31.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.60 %
Unclassified	root	N/A	31.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.60 %
Unclassified	root	N/A	31.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	61.98 %
Unclassified	root	N/A	31.40 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.55 %
Unclassified	root	N/A	31.40 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	39.67 %
Unclassified	root	N/A	31.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.65 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	39.67 %
Unclassified	root	N/A	31.40 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.65 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.40 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	28.10 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
unclassified Planctomycetales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.40 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	19.01 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.40 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.83 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.40 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.83 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_117977947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300002568\|C688J35102_119209283	Not Available	655	Open in IMG/M
3300002568\|C688J35102_119864330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300002568\|C688J35102_120524414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300002568\|C688J35102_120535846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1155	Open in IMG/M
3300004081\|Ga0063454_101807829	Not Available	535	Open in IMG/M
3300004081\|Ga0063454_102074344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300004114\|Ga0062593_101281330	Not Available	775	Open in IMG/M
3300005093\|Ga0062594_101668614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	664	Open in IMG/M
3300005327\|Ga0070658_10254890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300005338\|Ga0068868_100838060	Not Available	832	Open in IMG/M
3300005344\|Ga0070661_101078143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300005355\|Ga0070671_101602514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	577	Open in IMG/M
3300005366\|Ga0070659_100121061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2119	Open in IMG/M
3300005440\|Ga0070705_100510932	Not Available	914	Open in IMG/M
3300005564\|Ga0070664_100338249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1367	Open in IMG/M
3300005614\|Ga0068856_102441988	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300006031\|Ga0066651_10462876	Not Available	672	Open in IMG/M
3300006169\|Ga0082029_1741812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	784	Open in IMG/M
3300006196\|Ga0075422_10275642	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300006755\|Ga0079222_10437043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300006844\|Ga0075428_100630666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1144	Open in IMG/M
3300006853\|Ga0075420_101235259	Not Available	642	Open in IMG/M
3300006918\|Ga0079216_10361017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	892	Open in IMG/M
3300006918\|Ga0079216_10487366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	809	Open in IMG/M
3300007004\|Ga0079218_12985340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	569	Open in IMG/M
3300009094\|Ga0111539_10563138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1327	Open in IMG/M
3300009094\|Ga0111539_12771379	Not Available	568	Open in IMG/M
3300009098\|Ga0105245_12403242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	580	Open in IMG/M
3300009100\|Ga0075418_11063869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300009147\|Ga0114129_11396837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	864	Open in IMG/M
3300009147\|Ga0114129_12611212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300009156\|Ga0111538_10258417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2204	Open in IMG/M
3300009156\|Ga0111538_11600469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300009162\|Ga0075423_10702452	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300009789\|Ga0126307_10062378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2924	Open in IMG/M
3300009789\|Ga0126307_10139680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1936	Open in IMG/M
3300009789\|Ga0126307_10197667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1613	Open in IMG/M
3300009789\|Ga0126307_10236051	Not Available	1469	Open in IMG/M
3300009789\|Ga0126307_10480223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1003	Open in IMG/M
3300009789\|Ga0126307_11017242	Not Available	670	Open in IMG/M
3300009789\|Ga0126307_11094307	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300009840\|Ga0126313_10009792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5993	Open in IMG/M
3300009840\|Ga0126313_10025651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3983	Open in IMG/M
3300009840\|Ga0126313_10483820	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300009840\|Ga0126313_10994960	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	687	Open in IMG/M
3300009840\|Ga0126313_11169745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	633	Open in IMG/M
3300010036\|Ga0126305_10325682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300010037\|Ga0126304_10932138	Not Available	591	Open in IMG/M
3300010037\|Ga0126304_11204580	All Organisms → cellular organisms → Bacteria → Terrabacteria group	519	Open in IMG/M
3300010038\|Ga0126315_10087940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1761	Open in IMG/M
3300010038\|Ga0126315_10951687	All Organisms → cellular organisms → Bacteria → Terrabacteria group	573	Open in IMG/M
3300010039\|Ga0126309_10009225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3995	Open in IMG/M
3300010039\|Ga0126309_10628184	Not Available	680	Open in IMG/M
3300010040\|Ga0126308_10006952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5443	Open in IMG/M
3300010040\|Ga0126308_10240425	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300010042\|Ga0126314_10125791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1767	Open in IMG/M
3300010044\|Ga0126310_10746324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	747	Open in IMG/M
3300010166\|Ga0126306_10036848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3336	Open in IMG/M
3300010166\|Ga0126306_10218481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1445	Open in IMG/M
3300012043\|Ga0136631_10112615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1039	Open in IMG/M
3300012093\|Ga0136632_10309226	All Organisms → cellular organisms → Bacteria → Terrabacteria group	711	Open in IMG/M
3300012184\|Ga0136610_1300653	All Organisms → cellular organisms → Bacteria → Terrabacteria group	548	Open in IMG/M
3300012684\|Ga0136614_10252098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1319	Open in IMG/M
3300013104\|Ga0157370_10905013	Not Available	801	Open in IMG/M
3300014488\|Ga0182001_10352324	Not Available	620	Open in IMG/M
3300015373\|Ga0132257_102176129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300017654\|Ga0134069_1177734	Not Available	720	Open in IMG/M
3300017787\|Ga0183260_10012828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	6454	Open in IMG/M
3300017965\|Ga0190266_10213987	Not Available	934	Open in IMG/M
3300018422\|Ga0190265_10107443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2633	Open in IMG/M
3300018422\|Ga0190265_10148779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2287	Open in IMG/M
3300018422\|Ga0190265_11877218	Not Available	706	Open in IMG/M
3300018422\|Ga0190265_11972002	Not Available	690	Open in IMG/M
3300018422\|Ga0190265_12712746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	592	Open in IMG/M
3300018429\|Ga0190272_10285682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1267	Open in IMG/M
3300018432\|Ga0190275_13009783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	545	Open in IMG/M
3300018432\|Ga0190275_13308158	Not Available	522	Open in IMG/M
3300018466\|Ga0190268_10917446	Not Available	684	Open in IMG/M
3300018466\|Ga0190268_11289471	Not Available	615	Open in IMG/M
3300018476\|Ga0190274_12664191	All Organisms → cellular organisms → Bacteria → Terrabacteria group	597	Open in IMG/M
3300019377\|Ga0190264_10856815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	702	Open in IMG/M
3300019767\|Ga0190267_11084237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300020181\|Ga0196958_10042324	Not Available	1384	Open in IMG/M
3300022756\|Ga0222622_10371826	Not Available	1001	Open in IMG/M
3300022883\|Ga0247786_1101626	Not Available	622	Open in IMG/M
3300025920\|Ga0207649_11145407	Not Available	614	Open in IMG/M
3300025925\|Ga0207650_10600262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300025932\|Ga0207690_11652304	Not Available	535	Open in IMG/M
3300025945\|Ga0207679_10566607	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300026023\|Ga0207677_11015469	Not Available	753	Open in IMG/M
3300026023\|Ga0207677_11902178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300026116\|Ga0207674_10540473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1126	Open in IMG/M
3300026121\|Ga0207683_11984268	Not Available	530	Open in IMG/M
3300027638\|Ga0208612_1107245	All Organisms → cellular organisms → Bacteria → Terrabacteria group	718	Open in IMG/M
3300027691\|Ga0209485_1216418	Not Available	603	Open in IMG/M
3300027880\|Ga0209481_10243392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	905	Open in IMG/M
3300028596\|Ga0247821_10667156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	676	Open in IMG/M
3300028596\|Ga0247821_10795550	Not Available	623	Open in IMG/M
3300028721\|Ga0307315_10174878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	659	Open in IMG/M
3300028744\|Ga0307318_10200173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	691	Open in IMG/M
3300028771\|Ga0307320_10183953	Not Available	815	Open in IMG/M
3300028811\|Ga0307292_10395629	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300028875\|Ga0307289_10157557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	934	Open in IMG/M
3300028881\|Ga0307277_10010295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3600	Open in IMG/M
3300030336\|Ga0247826_11092876	Not Available	636	Open in IMG/M
3300030336\|Ga0247826_11254381	Not Available	596	Open in IMG/M
3300030336\|Ga0247826_11376382	Not Available	570	Open in IMG/M
3300031548\|Ga0307408_101444205	Not Available	649	Open in IMG/M
3300031731\|Ga0307405_10425143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1047	Open in IMG/M
3300031903\|Ga0307407_11045803	Not Available	633	Open in IMG/M
3300031938\|Ga0308175_101421008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	774	Open in IMG/M
3300031995\|Ga0307409_101059574	All Organisms → cellular organisms → Bacteria → Terrabacteria group	831	Open in IMG/M
3300031995\|Ga0307409_101902695	Not Available	624	Open in IMG/M
3300032004\|Ga0307414_10617689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	974	Open in IMG/M
3300032005\|Ga0307411_10841814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	811	Open in IMG/M
3300032080\|Ga0326721_10081232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1501	Open in IMG/M
3300032080\|Ga0326721_10101247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1378	Open in IMG/M
3300032080\|Ga0326721_10308448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	885	Open in IMG/M
3300033550\|Ga0247829_11494214	Not Available	558	Open in IMG/M
3300034268\|Ga0372943_0979964	All Organisms → cellular organisms → Bacteria → Terrabacteria group	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.42%
Host-Associated	Host-Associated	30.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.64%
Plants	Host-Associated → Plants	30.58%
Aquatic	Environmental → Aquatic	5.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.79%
Freshwater	Environmental → Aquatic → Freshwater	4.96%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.44%
Loam	Environmental → Terrestrial → Soil → Loam	6.61%
Ice	Environmental → Aquatic → Freshwater → Ice	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	20.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1179779471	3300002568	Soil	TPVLVVLSIALYVAGLVLLAWEGRRDAAIVLAAVGGVGLSIFTLP*
C688J35102_1192092832	3300002568	Soil	MPVLVVASILVYVAGLVLLAWEGRRDVAILLAAVGGVALSIVTLP*
C688J35102_1198643302	3300002568	Soil	MTPVLVVLSIALYVAGLVLLAWEGRRDAAIALAAIGGVGLSIFTLP*
C688J35102_1205244143	3300002568	Soil	VGPVLVVASILVYVAGLVLLAWEGRRDLAILLAAVGGVALSIVTLP*
C688J35102_1205358462	3300002568	Soil	MTPVLVVLSIALYVAGLVLLAWEGRRNAAILLAVVGGVGLSIFTLP*
Ga0063454_1018078291	3300004081	Soil	MMPALVVASILVYVAGLVLLAWEGRRDLAILLAAVGGVALSIVTLP*
Ga0063454_1020743442	3300004081	Soil	VTPVLVVASIAVYVAGLVLLAWEGRRDVAILLAAVGGVALSIVTLP*
Ga0062593_1012813302	3300004114	Soil	VFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0062594_1016686142	3300005093	Soil	VGPVLVVASILVYVAGLVLLAWEGRRDMAILLAAVGGVALSIVTLP*
Ga0070658_102548902	3300005327	Corn Rhizosphere	VSAVFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0068868_1008380602	3300005338	Miscanthus Rhizosphere	VTPVLVVLSITLYVAGCILLAWEGRRDAAILLAVVGGVGLSVFTLP*
Ga0070661_1010781433	3300005344	Corn Rhizosphere	RPDVRLDCSAVSAVFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0070671_1016025142	3300005355	Switchgrass Rhizosphere	VSAVFVVVSLAVYAAGLVLLAWEGRRDVAILLAAAGGVALSIATLP*
Ga0070659_1001210611	3300005366	Corn Rhizosphere	GAAATRPDVRLDCSAVSAVFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0070705_1005109322	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVAVSIATLP*
Ga0070664_1003382493	3300005564	Corn Rhizosphere	VFVVVSLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0068856_1024419882	3300005614	Corn Rhizosphere	VFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIAT
Ga0066651_104628761	3300006031	Soil	MMPALVVASILVYAAGLVLLAWEGRRDLAILLAAVGGVALSIVTLP*
Ga0082029_17418122	3300006169	Termite Nest	VSALFVIVSLAVYAAGLILLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0075422_102756422	3300006196	Populus Rhizosphere	VSAVFVVVSLAVYAAGLVLLAWEGRRDLAIVLAAVGGVALSIATLP*
Ga0079222_104370432	3300006755	Agricultural Soil	VSAVFVVVSLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0075428_1006306663	3300006844	Populus Rhizosphere	VSAVFVVCSIAVYATGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0075420_1012352592	3300006853	Populus Rhizosphere	VSAVFVVSSIVVYVAGLLLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0079216_103610173	3300006918	Agricultural Soil	VSAVFVIVSILVYGAGLVLLAWEGRRHLAIVLAAVGGIALSIATLP*
Ga0079216_104873662	3300006918	Agricultural Soil	VSALFVVSSIAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0079218_129853402	3300007004	Agricultural Soil	VIVSLAVYVAGLVLLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0111539_105631382	3300009094	Populus Rhizosphere	VSAAFVVISLVVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0111539_127713792	3300009094	Populus Rhizosphere	VSAVFVIVSLAVYAAGLVLLAWEGRRDVAILLAAAGGVALSIATLP*
Ga0105245_124032422	3300009098	Miscanthus Rhizosphere	MMPVLVVASILVYVAGLVLLAWEGRRDIAILLAAVGGVALSIVTLP*
Ga0075418_110638693	3300009100	Populus Rhizosphere	VSAAFVVISLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0114129_113968372	3300009147	Populus Rhizosphere	VSAVFVVSSLVVYVAGLLLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0114129_126112123	3300009147	Populus Rhizosphere	SLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0111538_102584174	3300009156	Populus Rhizosphere	VSAVFVVVSLAVYAAGLVLLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0111538_116004692	3300009156	Populus Rhizosphere	VTPVLVVLSITLYVAGCILLAWEGRRNAAILLAVVGGLGLSVFTLP*
Ga0075423_107024522	3300009162	Populus Rhizosphere	VSAVFVVVSLAVYVAGLILLAAVGGVALSIATLP*
Ga0126307_100623783	3300009789	Serpentine Soil	VTAAFVVISLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126307_101396804	3300009789	Serpentine Soil	MTAVFVVGSLLVYGAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126307_101976673	3300009789	Serpentine Soil	VTAIFVVSSLLVYGAGLVLLAWEARRDLAILLAAVGGVALSIATLP*
Ga0126307_102360513	3300009789	Serpentine Soil	VSAVFVIVSLAVYAAGLVLLAWEGRRDLAIVLAAVGGVALSIATLP*
Ga0126307_104802232	3300009789	Serpentine Soil	VSAVFVVTSIVVYVAGLLLLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0126307_110172421	3300009789	Serpentine Soil	TLLAVSAVFVIVSLAVYAAGLVLLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0126307_110943071	3300009789	Serpentine Soil	VTHVLVVVSILLYAAGLILLAWEGRRDAAIALAAAGGVGLSVFTLP*
Ga0126313_100097926	3300009840	Serpentine Soil	VSALFVIVSLAVYAAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126313_100256514	3300009840	Serpentine Soil	VSAVFVVSSLAIYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126313_104838202	3300009840	Serpentine Soil	VSAVFVVSSLVVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126313_109949602	3300009840	Serpentine Soil	MPVLVVASILVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0126313_111697452	3300009840	Serpentine Soil	VTALFVVGSLLVYGAGLLLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126305_103256823	3300010036	Serpentine Soil	LAVSAIFVVSSLAVYVAGLVLLAWEGRRDLAILLAAAGGVGLSIATLP*
Ga0126304_109321382	3300010037	Serpentine Soil	LLVYGAGLLLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126304_112045801	3300010037	Serpentine Soil	VLSAIFVVSSLAVYVAGLVLLAWEGRRDLAILLAAAGGVGLSIATLP*
Ga0126315_100879402	3300010038	Serpentine Soil	VSAVFVVSSLAIYVAGLVLLAWDGRRDLAILLAAVGGVALSIATLP*
Ga0126315_109516872	3300010038	Serpentine Soil	MGPVLLVLSIAIYVAGCVLLAWEGRRDAAVVLAVVGGVGLSIFTLP*
Ga0126309_100092253	3300010039	Serpentine Soil	VSALFVIVSLAVYAAGLVLLAWEGRRDLAIVLAAVGGVALSIATLP*
Ga0126309_106281841	3300010039	Serpentine Soil	VTPVLVVVSIALYVAGLVLLAWEGRRNAAIALAAVGGLGLSVFTLP*
Ga0126308_100069526	3300010040	Serpentine Soil	VTALFVVSSLLVYGAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0126308_102404252	3300010040	Serpentine Soil	VSAIFVVSSLAVYVAGLVLLAWEGRRDLAILLAAAGGVGLSIATLP*
Ga0126314_101257913	3300010042	Serpentine Soil	MGPVLLVLSIVIYVAGCVLLAWEGRRDAAVVLAVVGGVGLSIFTLP*
Ga0126310_107463241	3300010044	Serpentine Soil	VSAVFVVCSLAVYAAGLVLLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0126306_100368481	3300010166	Serpentine Soil	VTAAFVVISLAVYVAGLVLLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0126306_102184812	3300010166	Serpentine Soil	VTHVLVVVSILLYAAGLILLAWEGRRDAAIALAAVGGVGLSVFTLP*
Ga0136631_101126152	3300012043	Polar Desert Sand	MPVLVVASIAVYVAGLVLLAWEGRRDVAILLAAAGGVALSIVTLP*
Ga0136632_103092262	3300012093	Polar Desert Sand	VTPVLIVTSIALYVAGLVLLAWEGRRQAAIVLAAVGGIGLSIFTLP*
Ga0136610_13006531	3300012184	Polar Desert Sand	MTVLVVASIAIYVAGLVLLAWEGRRHAAIVLAAVGGVA
Ga0136614_102520983	3300012684	Polar Desert Sand	MPVLVVASIAIYVAGLVLLAWEGRRHVAILLAAVGGVALSIVTLP*
Ga0157370_109050133	3300013104	Corn Rhizosphere	AVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0182001_103523241	3300014488	Soil	TLLAVSAVFVVCSLAVYVAGLVLLAWEGRRDLAILLAAAGGVALSIATLP*
Ga0132257_1021761293	3300015373	Arabidopsis Rhizosphere	VYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP*
Ga0134069_11777341	3300017654	Grasslands Soil	TAMMPALVVASILVYAAGLVLLAWEGRRDLAILLAAVGGVALSIVTLP
Ga0183260_100128286	3300017787	Polar Desert Sand	VTPVLIVTSIALYVAGLVLLAWEGRRQAAIVLAAVGGIGLSIFTLP
Ga0190266_102139872	3300017965	Soil	VSAVFVICSLAVYAAGLVLLAWEGRRDLAIVLAAVGGVALSIATLP
Ga0190265_101074434	3300018422	Soil	VSALFVIVSLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0190265_101487793	3300018422	Soil	VLVVCSVLLYVAGLVLLAWEGRRQLAIVLAAVGGLGLSVFTLP
Ga0190265_118772182	3300018422	Soil	VGGTLGGVTLVLLVVSIVVYVAGLVLLAWEGRRDAAILLAAVGGVGLSIFTLP
Ga0190265_119720022	3300018422	Soil	VTPVLVVASITLYVAGLVLLAWEGRRDAAIVLAAVGGLGLSVFTLP
Ga0190265_127127462	3300018422	Soil	VSAVFVVSSIVVYVAGLLLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0190272_102856822	3300018429	Soil	VVSSLLVYGTGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0190275_130097832	3300018432	Soil	VTAVFVVLSLLVYGAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0190275_133081582	3300018432	Soil	VTLVLLVVSIAVYVAGLVLLAWEGRRDAAILLAAVGGVGLSIFTLP
Ga0190268_109174463	3300018466	Soil	VFVVSSLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0190268_112894712	3300018466	Soil	VVSSLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0190274_126641912	3300018476	Soil	VSALFVIVSLAVYAAGLVLLAWEGRRDLAIVLAAVGGVALSIATLP
Ga0190264_108568152	3300019377	Soil	VFVVSSIVVYVAGLLLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0190267_110842372	3300019767	Soil	VVISLAVYVAGLVLLAWEGRRDLAILLAAAGGVALSIATLP
Ga0196958_100423243	3300020181	Soil	VSAVFVIVSILVYGAGLVLLAWEGRRHLAILLAAAGGVALSIATLP
Ga0222622_103718262	3300022756	Groundwater Sediment	VISSLAVYAAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0247786_11016262	3300022883	Soil	VFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP
Ga0207649_111454072	3300025920	Corn Rhizosphere	VSAVFVLVSLAVYAAGLVLLAWEGRRDLAILLAAAGGVALSIATLP
Ga0207650_106002623	3300025925	Switchgrass Rhizosphere	VSAVFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP
Ga0207690_116523042	3300025932	Corn Rhizosphere	VSAAFVVVSLAVYVAGLILLAWEGRRDLAILLAAVGGVALSIATLP
Ga0207679_105666072	3300025945	Corn Rhizosphere	VFVVVSLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0207677_110154692	3300026023	Miscanthus Rhizosphere	VTPVLVVLSITLYVAGCILLAWEGRRDAAILLAVVGGVGLSVFTLP
Ga0207677_119021782	3300026023	Miscanthus Rhizosphere	MMPVLVVASILVYVAGLVLLAWEGRRDIAILLAAVGGVALSIVTLP
Ga0207674_105404733	3300026116	Corn Rhizosphere	VSAVFVVVSLAVYAAGLVLLAWEGRRDLAILLAAAGGVALSIATLP
Ga0207683_119842682	3300026121	Miscanthus Rhizosphere	MPVLVVLSIALYVAGCVLLAWEGRRDVAILLAVVGGVGLSVFTLP
Ga0208612_11072452	3300027638	Polar Desert	MTVLVVASIAIYVAGLVLLAWEGRRHAAIVLAAVGGVALSIVTLP
Ga0209485_12164182	3300027691	Agricultural Soil	VSAVFVIVSILVYGAGLVLLAWEGRRHLAIVLAAVGGIALSIATLP
Ga0209481_102433922	3300027880	Populus Rhizosphere	VSAAFVVISLVVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0247821_106671562	3300028596	Soil	VVSSLAVYVAGLILLAWEGRRDLAILLAAAGGVALSIATLP
Ga0247821_107955502	3300028596	Soil	VSAVFVVISLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307315_101748781	3300028721	Soil	VTAIFVISSLAVYAAGLVLLAWEGRRDLAILLAAVGG
Ga0307318_102001732	3300028744	Soil	VISSLAVYAAGLVLLAWEGRRDLAILLAAVGAVALSIATLP
Ga0307320_101839532	3300028771	Soil	MPALVVASILVYVAGLVLLAWEGRRDVAILLAAVGGVALSIVTLP
Ga0307292_103956291	3300028811	Soil	VTAIFVISSLAVDAAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307289_101575572	3300028875	Soil	VTAVFVISSLAVYAAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307277_100102955	3300028881	Soil	MPVLVVASIAVYVAGIVLLAWEGRRDVAILLAAVGGVALSIVTLP
Ga0247826_110928762	3300030336	Soil	VSAAFVVISLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0247826_112543812	3300030336	Soil	VSPVLVVASLLVYCAGLVLLAWEGRRDMAILLAAVGGVALSIVTLP
Ga0247826_113763822	3300030336	Soil	VVSSLAVYVAGLLLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307408_1014442051	3300031548	Rhizosphere	VVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307405_104251433	3300031731	Rhizosphere	SLVVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307407_110458031	3300031903	Rhizosphere	PAATLLAVSAVFVVSSLVVYVAGLVLLAWEGRRDLAILLAAVGGVALRIATLP
Ga0308175_1014210083	3300031938	Soil	LAVYAAGLVLLAWEGRRDLAILLAAAGGVALSIATLP
Ga0307409_1010595742	3300031995	Rhizosphere	VTAAFVVISLAVYVAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307409_1019026951	3300031995	Rhizosphere	SDTGRGGLRLHCRPVSALFVVVSLAVYVAGLVLLAWEGRRDLAILLAAAGGVALSIATLP
Ga0307414_106176892	3300032004	Rhizosphere	VSALFVIVSLAVYAAGLVLLAWEGRRDLAILLAAVGGVALSIATLP
Ga0307411_108418143	3300032005	Rhizosphere	GLRLHCRPVSALFVVVSLAVYVAGLVLLAWEGRRDLAILLAAAGGVALSIATLP
Ga0326721_100812322	3300032080	Soil	MTAVFVVGSLLLYGAGLVLLAWEERRDLAILLAAVGGVALSIATLP
Ga0326721_101012472	3300032080	Soil	VIVSLAVYAAGLVLLAWEGRRDLAILLAAAGGVALSIATLP
Ga0326721_103084482	3300032080	Soil	MGLVLLVLSIAIYVAGCVLLAWEGRRDAAVVLAVVGGVGLSIFTLP
Ga0247829_114942142	3300033550	Soil	PVATLLAVSAVFVVISLAVYVAGLVLLAWEGRRDLAILLAALGGVALSIATLP
Ga0372943_0979964_50_190	3300034268	Soil	VTAVLVVLSITLYVAGCILLAWEGRRDAAIALAAVGAVGLSIFTLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072721

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences