Metagenome / Metatranscriptome Family F072717

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072717
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	49 residues
Representative Sequence	MRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSAS
Number of Associated Samples	97
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.17 %
% of genes near scaffold ends (potentially truncated)	97.52 %
% of genes from short scaffolds (< 2000 bps)	89.26 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.678 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.314 % of family members)
Environment Ontology (ENVO)	Unclassified (31.405 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.851 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.03% β-sheet: 17.81% Coil/Unstructured: 56.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00561	Abhydrolase_1	4.13
PF03401	TctC	2.48
PF03466	LysR_substrate	2.48
PF13180	PDZ_2	1.65
PF00596	Aldolase_II	1.65
PF13531	SBP_bac_11	1.65
PF01638	HxlR	0.83
PF00226	DnaJ	0.83
PF00239	Resolvase	0.83
PF04909	Amidohydro_2	0.83
PF04672	Methyltransf_19	0.83
PF13751	DDE_Tnp_1_6	0.83
PF13683	rve_3	0.83
PF16861	Carbam_trans_C	0.83
PF13340	DUF4096	0.83
PF12697	Abhydrolase_6	0.83
PF06863	DUF1254	0.83
PF13442	Cytochrome_CBB3	0.83
PF13343	SBP_bac_6	0.83
PF01370	Epimerase	0.83
PF01425	Amidase	0.83
PF00589	Phage_integrase	0.83
PF00872	Transposase_mut	0.83
PF08450	SGL	0.83
PF13189	Cytidylate_kin2	0.83
PF02371	Transposase_20	0.83
PF00027	cNMP_binding	0.83
PF06042	NTP_transf_6	0.83
PF00080	Sod_Cu	0.83
PF01546	Peptidase_M20	0.83
PF00400	WD40	0.83
PF06411	HdeA	0.83
PF04392	ABC_sub_bind	0.83
PF00092	VWA	0.83
PF06080	DUF938	0.83
PF00501	AMP-binding	0.83
PF01124	MAPEG	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.48
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.83
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.83
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.83
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3575	Uncharacterized conserved protein	Function unknown [S]	0.83
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.68 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.68 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.68 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.48 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.49 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.48 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.65 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.83 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.83 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.83 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.83 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	0.83 %
Tranquillimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tranquillimonas	0.83 %
Erythrobacter/Porphyrobacter group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.83 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.83 %
Tranquillimonas alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tranquillimonas → Tranquillimonas alkanivorans	0.83 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.83 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.83 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.83 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.83 %
Erythrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter	0.83 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %
Amycolatopsis jejuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jejuensis	0.83 %
unclassified Erythrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter	0.83 %
Mesorhizobium sp. L-8-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L-8-10	0.83 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.83 %
Tranquillimonas alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tranquillimonas → Tranquillimonas alkanivorans	0.83 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.83 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.83 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.83 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.65 %
Erythrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp.	0.83 %
Amycolatopsis jejuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jejuensis	0.83 %
Mesorhizobium sp. L-8-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L-8-10	0.83 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.83 %
Tranquillimonas alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tranquillimonas → Tranquillimonas alkanivorans	0.83 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.83 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.83 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.83 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118336640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	550	Open in IMG/M
3300004080\|Ga0062385_10663024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	668	Open in IMG/M
3300004140\|Ga0058894_1423720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300004267\|Ga0066396_10093060	Not Available	548	Open in IMG/M
3300005332\|Ga0066388_100840212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1505	Open in IMG/M
3300005713\|Ga0066905_100171853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1588	Open in IMG/M
3300005947\|Ga0066794_10251943	Not Available	530	Open in IMG/M
3300006047\|Ga0075024_100818183	Not Available	522	Open in IMG/M
3300006172\|Ga0075018_10146640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1085	Open in IMG/M
3300006800\|Ga0066660_10159407	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300006852\|Ga0075433_11964526	Not Available	501	Open in IMG/M
3300007788\|Ga0099795_10276694	Not Available	731	Open in IMG/M
3300009012\|Ga0066710_102984164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L-8-10	660	Open in IMG/M
3300009090\|Ga0099827_11199092	Not Available	660	Open in IMG/M
3300009143\|Ga0099792_11065897	Not Available	543	Open in IMG/M
3300009525\|Ga0116220_10527963	Not Available	538	Open in IMG/M
3300009792\|Ga0126374_10335454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300009792\|Ga0126374_11478876	Not Available	556	Open in IMG/M
3300009792\|Ga0126374_11842401	Not Available	507	Open in IMG/M
3300010043\|Ga0126380_11014085	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010047\|Ga0126382_10261986	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300010047\|Ga0126382_12353696	Not Available	516	Open in IMG/M
3300010159\|Ga0099796_10387319	Not Available	610	Open in IMG/M
3300010329\|Ga0134111_10303698	Not Available	665	Open in IMG/M
3300010358\|Ga0126370_10010086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5016	Open in IMG/M
3300010358\|Ga0126370_10383011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1149	Open in IMG/M
3300010358\|Ga0126370_12328839	Not Available	530	Open in IMG/M
3300010359\|Ga0126376_10078419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2445	Open in IMG/M
3300010360\|Ga0126372_13180024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300010361\|Ga0126378_10298365	All Organisms → cellular organisms → Bacteria → Acidobacteria	1714	Open in IMG/M
3300010362\|Ga0126377_11588853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300010366\|Ga0126379_10217230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1854	Open in IMG/M
3300010366\|Ga0126379_10791888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1047	Open in IMG/M
3300010366\|Ga0126379_11430922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	797	Open in IMG/M
3300010366\|Ga0126379_11848032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300010366\|Ga0126379_12304506	Not Available	639	Open in IMG/M
3300010366\|Ga0126379_12468146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	619	Open in IMG/M
3300010366\|Ga0126379_12564493	Not Available	608	Open in IMG/M
3300010366\|Ga0126379_12766376	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010376\|Ga0126381_100008665	All Organisms → cellular organisms → Bacteria	11376	Open in IMG/M
3300010379\|Ga0136449_100621311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp.	1835	Open in IMG/M
3300010379\|Ga0136449_103402575	Not Available	609	Open in IMG/M
3300010398\|Ga0126383_12179033	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300011120\|Ga0150983_10810907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300011269\|Ga0137392_10100768	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300011270\|Ga0137391_10615950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300011271\|Ga0137393_11784463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300011429\|Ga0137455_1251807	Not Available	521	Open in IMG/M
3300012189\|Ga0137388_10473159	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300012200\|Ga0137382_11142750	Not Available	555	Open in IMG/M
3300012205\|Ga0137362_10256216	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300012205\|Ga0137362_10321685	Not Available	1339	Open in IMG/M
3300012363\|Ga0137390_10189876	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300012363\|Ga0137390_10198088	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300012363\|Ga0137390_11780214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jejuensis	548	Open in IMG/M
3300012469\|Ga0150984_103309071	Not Available	1133	Open in IMG/M
3300012918\|Ga0137396_10521386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	880	Open in IMG/M
3300012922\|Ga0137394_11442300	Not Available	548	Open in IMG/M
3300012924\|Ga0137413_10105382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1767	Open in IMG/M
3300012925\|Ga0137419_10025788	Not Available	3523	Open in IMG/M
3300012927\|Ga0137416_11401922	Not Available	633	Open in IMG/M
3300012944\|Ga0137410_10251296	Not Available	1386	Open in IMG/M
3300012944\|Ga0137410_11068286	Not Available	690	Open in IMG/M
3300012944\|Ga0137410_11710476	Not Available	553	Open in IMG/M
3300012971\|Ga0126369_11679458	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300014501\|Ga0182024_10568708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1426	Open in IMG/M
3300015245\|Ga0137409_10265911	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300015372\|Ga0132256_103510038	Not Available	527	Open in IMG/M
3300016357\|Ga0182032_10175780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1608	Open in IMG/M
3300016357\|Ga0182032_11997093	Not Available	509	Open in IMG/M
3300016371\|Ga0182034_10020198	All Organisms → cellular organisms → Bacteria → Proteobacteria	3969	Open in IMG/M
3300016387\|Ga0182040_10101287	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300016387\|Ga0182040_10400823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300016404\|Ga0182037_11746952	Not Available	555	Open in IMG/M
3300017928\|Ga0187806_1356894	Not Available	524	Open in IMG/M
3300017970\|Ga0187783_10157824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Tranquillimonas → Tranquillimonas alkanivorans	1671	Open in IMG/M
3300018060\|Ga0187765_11122911	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300018061\|Ga0184619_10414927	Not Available	606	Open in IMG/M
3300018062\|Ga0187784_11466384	Not Available	540	Open in IMG/M
3300020579\|Ga0210407_10158560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1747	Open in IMG/M
3300020580\|Ga0210403_11494045	Not Available	508	Open in IMG/M
3300021168\|Ga0210406_11035207	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300021170\|Ga0210400_10489876	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300021377\|Ga0213874_10466918	Not Available	500	Open in IMG/M
3300021432\|Ga0210384_10924342	Not Available	773	Open in IMG/M
3300021479\|Ga0210410_10381497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1263	Open in IMG/M
3300021560\|Ga0126371_10037374	All Organisms → cellular organisms → Bacteria → Proteobacteria	4586	Open in IMG/M
3300021560\|Ga0126371_10109196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2770	Open in IMG/M
3300021560\|Ga0126371_11587137	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300024288\|Ga0179589_10552213	Not Available	537	Open in IMG/M
3300026551\|Ga0209648_10102599	Not Available	2341	Open in IMG/M
3300026557\|Ga0179587_10836100	Not Available	607	Open in IMG/M
3300027643\|Ga0209076_1192813	Not Available	561	Open in IMG/M
3300027696\|Ga0208696_1145226	Not Available	770	Open in IMG/M
3300027874\|Ga0209465_10116612	Not Available	1315	Open in IMG/M
3300027894\|Ga0209068_10650003	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300028047\|Ga0209526_10158479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1583	Open in IMG/M
3300029636\|Ga0222749_10632717	Not Available	585	Open in IMG/M
3300030007\|Ga0311338_10980090	Not Available	823	Open in IMG/M
3300030618\|Ga0311354_11079928	Not Available	734	Open in IMG/M
3300030730\|Ga0307482_1095126	Not Available	807	Open in IMG/M
3300031234\|Ga0302325_11988605	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300031236\|Ga0302324_102182559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300031561\|Ga0318528_10168799	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300031668\|Ga0318542_10464341	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300031682\|Ga0318560_10230088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300031708\|Ga0310686_107172938	Not Available	1218	Open in IMG/M
3300031719\|Ga0306917_11285685	Not Available	566	Open in IMG/M
3300031796\|Ga0318576_10305750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300031821\|Ga0318567_10751640	Not Available	553	Open in IMG/M
3300031835\|Ga0318517_10173999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300031879\|Ga0306919_10546851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300031912\|Ga0306921_10109462	All Organisms → cellular organisms → Bacteria	3210	Open in IMG/M
3300031941\|Ga0310912_10128825	All Organisms → cellular organisms → Bacteria → Acidobacteria	1892	Open in IMG/M
3300031947\|Ga0310909_10829687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300031954\|Ga0306926_10107456	All Organisms → cellular organisms → Bacteria → Proteobacteria	3428	Open in IMG/M
3300031954\|Ga0306926_10619940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300032076\|Ga0306924_12072226	Not Available	584	Open in IMG/M
3300033289\|Ga0310914_10139585	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2127	Open in IMG/M
3300033289\|Ga0310914_11126237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300033290\|Ga0318519_10962383	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.69%
Host-Associated	Host-Associated	3.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.91%
Aquatic	Environmental → Aquatic	5.79%
Plants	Host-Associated → Plants	3.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.60%
Sediment	Environmental → Aquatic → Sediment	4.13%
Peat	Environmental → Terrestrial → Peat	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.48%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.86%
Loam	Environmental → Terrestrial → Soil → Loam	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1183366401	3300002568	Soil	MSTMRIMTAAALAAVFAVCTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKLADNALVVARIKASAAD
Ga0062385_106630241	3300004080	Bog Forest Soil	MSTMRILTAAAFATVFAVSTASAQTQRVAGTIDKVEGNTLY
Ga0058894_14237202	3300004140	Forest Soil	MSTMRILTAAAFATVFGVASASAQQAQRINGTIDKIEGNTLFIKAEG
Ga0066396_100930601	3300004267	Tropical Forest Soil	MSTMRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGN
Ga0066388_1008402121	3300005332	Tropical Forest Soil	MSTMRIMTAAALAAMFAVSTASAQQPTTQRVAGTLDKVEGNMLYIKA
Ga0066905_1001718532	3300005713	Tropical Forest Soil	MSTMRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVTLKLADNALVVA
Ga0066794_102519432	3300005947	Soil	MSTMRIMTAVALAAVFAVSTASAQQPTTQRVAGTLDKVEG
Ga0075024_1008181831	3300006047	Watersheds	MSTMRIMAAAALAAAFAVSTAWAQQQTQRVAGTIDKVEGK
Ga0075018_101466403	3300006172	Watersheds	MSTMRIMTAVALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYIKAASGP
Ga0066660_101594073	3300006800	Soil	MSTMRIMTAAALAALFAVSTASAQQPTTQRVAGTLDK
Ga0075433_119645262	3300006852	Populus Rhizosphere	MSRTTLQILAGAAFAAVLATSTAWGQGQTQRVAGTIEGVD
Ga0099795_102766941	3300007788	Vadose Zone Soil	MRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVTLKLADNALVVA
Ga0066710_1029841641	3300009012	Grasslands Soil	MSTMRIMTAAALAAVFAVFTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKLADN
Ga0099827_111990922	3300009090	Vadose Zone Soil	MRIMAAAALAAVFAVSTAWAQQPTQRVAGTIDKVEGKTLYIK
Ga0099792_110658972	3300009143	Vadose Zone Soil	MRIMTAVALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYIKAASG
Ga0116220_105279631	3300009525	Peatlands Soil	MAAAALAAVFAVSTAWAQQQTQRVAGTLDKVEGKTLHIKSASGPVTLT
Ga0126374_103354542	3300009792	Tropical Forest Soil	MTAAALAAVFAVSTAWAQQPTQRLAGKLATVEGHKL*
Ga0126374_114788762	3300009792	Tropical Forest Soil	MAAAALAAVFAVSTAWAQQQTQRVAGTIDKVEGKTLYIKSASGPVT
Ga0126374_118424011	3300009792	Tropical Forest Soil	MAAAALAALFAVSTAWGQQQTQRVAGTIDKVEGKTLCIK*
Ga0126380_110140852	3300010043	Tropical Forest Soil	MRIITAAALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLHIKAA
Ga0126382_102619861	3300010047	Tropical Forest Soil	MRIMTAAALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKLA
Ga0126382_123536961	3300010047	Tropical Forest Soil	MSTMRIMTAAALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKLA
Ga0099796_103873191	3300010159	Vadose Zone Soil	MTAAALALVFAVSTAWAQQPTQRVAGTLDKVEGNMLYIKSASGPVTLKLADNALV
Ga0134111_103036981	3300010329	Grasslands Soil	MRIMTAAALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKL
Ga0126370_100100861	3300010358	Tropical Forest Soil	MLGAARYPIGRTDMSTMRIMTAAALAAVFAVSTASAQQPATQRVAGTLDKVEGNTLYIKAASGPVMLKLADN
Ga0126370_103830111	3300010358	Tropical Forest Soil	MSKMRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEG
Ga0126370_123288392	3300010358	Tropical Forest Soil	MSTMRIMTAAALAAVFAVSTASAQQPTTQRVAGTLDKIEGNTLY
Ga0126376_100784191	3300010359	Tropical Forest Soil	MAAAALAALFAVSTAWGQQQTQRVAGTIDKVEGKTLYIKSASGPVTLTLADNAVIVAR
Ga0126372_131800241	3300010360	Tropical Forest Soil	MRILTAAAFATVFAVSTASAQQAQRVAGTIDKVEGNNLYIKSDSGPVSLTLADN
Ga0126378_102983652	3300010361	Tropical Forest Soil	MRITTAAALAVVFAVATASAQQPATQRIAGTLDKVEGNTLYIKAASGPVILKLADN
Ga0126377_115888531	3300010362	Tropical Forest Soil	MAAAALAAVFAVSTAWAQQQTQRVAGTIDKVEGKT
Ga0126379_102172305	3300010366	Tropical Forest Soil	MKAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVTLKLAD
Ga0126379_107918882	3300010366	Tropical Forest Soil	MSTMRIMTAAALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYI
Ga0126379_114309221	3300010366	Tropical Forest Soil	MRIVAAAALAAVFAVSTASAQQQTQRVAGTIDKVEGKTLYIRSASGPVTLTLADNAVI
Ga0126379_118480323	3300010366	Tropical Forest Soil	MTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVTLKLAD
Ga0126379_123045061	3300010366	Tropical Forest Soil	MAAAALAALFAVSTAWGQQQTQRVAGTIDKVEGKTLYIKSASGP
Ga0126379_124681461	3300010366	Tropical Forest Soil	MSTMQIITAAALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLY
Ga0126379_125644932	3300010366	Tropical Forest Soil	MRITAAVAFAAVFAVSTAWAQPQTQRVAGTIDKVEGNTLYIKSA
Ga0126379_127663762	3300010366	Tropical Forest Soil	MTAAALAAVIAVSTAWAQQPTQRVAGTLDKVEGNMLYIKSASGPVTLKLADNALVVARVKASAADI
Ga0126381_10000866514	3300010376	Tropical Forest Soil	MRIMTAAALVAVFAVSTASAQQPTAQRVAGTLDKVEGNTLYIKAASGPVILKLADN
Ga0136449_1006213111	3300010379	Peatlands Soil	MRILAAAAFATVFAVSTASAQQAQRVAGTIDKVEG
Ga0136449_1034025752	3300010379	Peatlands Soil	MRILTAAAFATIFAVSTASAQQAQRVAGTIDKVEGNTLYIKSASGPVSL
Ga0126383_121790331	3300010398	Tropical Forest Soil	MTAAALAAVIAVSTAWAQQPTQRVAGTLDKVEGNM
Ga0150983_108109072	3300011120	Forest Soil	MRILTAAAFATVVVVSTASAQQTQRVAGTIDKVEGNTLYIKSASGPVS
Ga0137392_101007686	3300011269	Vadose Zone Soil	MRIIAVAALAAAFAVSTAWAQQQTQRVAGTIDKVEGKTLYI
Ga0137391_106159503	3300011270	Vadose Zone Soil	MRIMTAVALAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVIL
Ga0137393_117844632	3300011271	Vadose Zone Soil	MRILTAAAFATVFAVSTASAQQAQRVAGTIDKVEGNTLYIKSASGPVSLT
Ga0137455_12518072	3300011429	Soil	MRIMTAAALAAVFAVSTASAQQPTTQRVAGTLEKVEGNTLHI
Ga0137388_104731592	3300012189	Vadose Zone Soil	MAAAALAALFAVSTAWGQQQTQRVAGIIDKVDGKTLYLKSASGPVTLTLADNA
Ga0137382_111427501	3300012200	Vadose Zone Soil	MRIMAAAAFATVFAISTASAQQAQRVAGTIDKVEGNTLYIKSASGPVSLTLAGNALIVSR
Ga0137362_102562162	3300012205	Vadose Zone Soil	MAAAAFAAVFAVSTAWAQQQTQRVAGTIDKVEGKTLYI
Ga0137362_103216851	3300012205	Vadose Zone Soil	MRIMAAAALAAVFAVSTAWAQQPTQRVAGTIDKVEGKTLYIKSASG
Ga0137390_101898764	3300012363	Vadose Zone Soil	MAAAALAALFAVSTAWGQQQTQRVAGIIDKVDGKTLYIKSASGPVTLTLAD
Ga0137390_101980884	3300012363	Vadose Zone Soil	MRIIAVAALAAAFAVSTAWAQQQTQRVAGTIDKVEGKTLYIKSASG
Ga0137390_117802142	3300012363	Vadose Zone Soil	MAAAALAAAFAVSTAWAQQQTQRVAGTIDKVEGKTLYIKSASG
Ga0150984_1033090711	3300012469	Avena Fatua Rhizosphere	MRIMTAAAFAAVVAVSTAWAQQPTQRVAGTLDKVEGNT
Ga0137396_105213862	3300012918	Vadose Zone Soil	MSRIQVMAAAALAALFAVSTAWGQQQTQRVAGIIDKV
Ga0137394_114423001	3300012922	Vadose Zone Soil	MRIMTAAALAAVVAVFTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKLADNALVVARIKA
Ga0137413_101053823	3300012924	Vadose Zone Soil	MRIMTAVALAAVFAVSIASAQQPTTQRVAGTLDKVEGNTLYIK
Ga0137419_100257881	3300012925	Vadose Zone Soil	MRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNT
Ga0137416_114019222	3300012927	Vadose Zone Soil	MAAAALAALFAVSTASGQQQTQRVAGIIDKVEGKTLYIKSASGPVTLTLADNAVIVARVKAT
Ga0137410_102512961	3300012944	Vadose Zone Soil	MRIMTAAALAAVFAVSSAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVTLK
Ga0137410_110682861	3300012944	Vadose Zone Soil	MTAAALAVVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVTLK
Ga0137410_117104761	3300012944	Vadose Zone Soil	MRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVTLKLADNA
Ga0126369_116794582	3300012971	Tropical Forest Soil	MTAAALAAVIAVSTAWAQQPTQRVAGTLDKVEGNMLYIKSASGPVTLKLADNALVVARVKASAADIKAG
Ga0182024_105687084	3300014501	Permafrost	MRILTAVAFATVFAVSTASAQQQTQRVAGTIDKVEGNTLYIKSASG
Ga0137409_102659111	3300015245	Vadose Zone Soil	MRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSAS
Ga0132256_1035100381	3300015372	Arabidopsis Rhizosphere	MSIMRIMTAAALAAVFAVSTASAQQPATQRVAGTL
Ga0182032_101757801	3300016357	Soil	MSTMRITTAAALAVVFAVATASAQQPATQRVAGTLDKVEGNTLYIKAASGPVILKLADNA
Ga0182032_119970932	3300016357	Soil	MSTMRIMAAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNTLYIKSASGPVT
Ga0182034_100201984	3300016371	Soil	MSTMRIMMAAAVAAVFAVSTASAQQPATQRVAGTLDKVQGNTLYIKAASGPVILKLADNALIVARIKASA
Ga0182040_101012871	3300016387	Soil	MSTMRITTAAALAVVFAVATASAQQPATQRVAGTLDKVEGNTLYIKAASGPVILKLADN
Ga0182040_104008232	3300016387	Soil	MSTMRIAAAAALAAVFTVSSAWAQTQRVAGTIDKVEGNTLYIK
Ga0182037_117469521	3300016404	Soil	MSTMRILTAAAFAAVFAVSTASAQQAQRVTGTIDKVEGNTLYIKS
Ga0187806_13568941	3300017928	Freshwater Sediment	MSTMRVMAAAALAAVFAVSTASAQQPTQRVAGTIDKVE
Ga0187783_101578241	3300017970	Tropical Peatland	MSTIRILTAAAFMTVFAFSTALAQQAQRVAGTIDRI
Ga0187765_111229112	3300018060	Tropical Peatland	MSTMRVMAAAGLTAVFAVSAALAQQPTQRVAGTIDKVEGKTLYIKSASGPV
Ga0184619_104149272	3300018061	Groundwater Sediment	MSTMRIMTAAALAAVFAVFTASAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKLADNA
Ga0187784_114663841	3300018062	Tropical Peatland	MSTMRIVAAATLAAVFAVSTASAQQPTQRVAGTIDKVEGKTLY
Ga0210407_101585601	3300020579	Soil	MSTMRILTAAAFATVFAVATASAQQTQRINGTIDKVEGNTLFIK
Ga0210403_114940451	3300020580	Soil	MSTMRITTAAALAVVFAVATASAQQPATQRVAGTLDKVEGNTLYIKAASGPVILKLADNALI
Ga0210406_110352072	3300021168	Soil	MSTMRILTAAAFATVFAVATASAQQTQRINGTIDKVEGNTLFIKA
Ga0210400_104898761	3300021170	Soil	MSTLRILTAAAFATVFTVATASAQQPQRLEGTIDKVEGNTLYIKASSGPVTLKL
Ga0213874_104669182	3300021377	Plant Roots	MNKMKIVAAAGLAALFAVSTAWGQQQTQRVAGVIDKVEGKTLYIKSASGPVTLTLADNAVIVARVKATA
Ga0210384_109243422	3300021432	Soil	MSTMRVMAAAAVAAVFAVSTAWAQQQTQRVAGTIDKVEGKTL
Ga0210410_103814973	3300021479	Soil	MSTMRIMAAAALAAVFAVSTAWAQQQTQRVAGTIDKVEGKTLYIKSASGP
Ga0126371_100373741	3300021560	Tropical Forest Soil	MSKMRIMTAAALAAVFAVSTAWAQQPTQRVAGTLDKVEGNT
Ga0126371_101091964	3300021560	Tropical Forest Soil	MSTMRIMTAAALVAVFAVSTASAQQPTAQRVAGTLDKVEGNTLYIKAASGPVILKLADNALVVARIK
Ga0126371_115871372	3300021560	Tropical Forest Soil	MSTIRIMTAAALAAVFAVSTAWAQQSTQRVAGTLDKVEGNTLYIKS
Ga0179589_105522131	3300024288	Vadose Zone Soil	MAAAALAALFAVSTAWGQQQTQRVAGIIDKVDGKTLYIQS
Ga0209648_101025992	3300026551	Grasslands Soil	MSTMRIMAAAAFAAVFAVSTAWAQQQTQRVAGTVDKVEGLATR
Ga0179587_108361001	3300026557	Vadose Zone Soil	MAAAALAALFAVSTAWGQQQTQRVAGIIDKVEGKTLYIKSASGPVTLTLADNAVIVA
Ga0209076_11928131	3300027643	Vadose Zone Soil	MAAAALAALFAVSTAWGQQQTQRVAGIIDKVEGKTLYIKSASGPVTLTL
Ga0208696_11452261	3300027696	Peatlands Soil	MSTMRVMAAAALAAVFAVSTAWAQQQTQRVAGTLDKVEGKTLHIKSASGPVTLTLTDNAVIVARVKATAADIKAGDYV
Ga0209465_101166122	3300027874	Tropical Forest Soil	MSTMRIMTAAALAAVIAVSTAWAQQPTQRVAGTLDKVEGNMLYIKSASGPVTLKL
Ga0209068_106500032	3300027894	Watersheds	MSTMRVMAAAALAAVFAVSTAWAQQQTQRVAGTIDKVEGKTLYIKSASGP
Ga0209526_101584791	3300028047	Forest Soil	MSTMRILTAAAFATVFAVATASAQQTQRINGTIDKVE
Ga0222749_106327171	3300029636	Soil	MSTMRVMAAAAVAAVFAVSTAWAQQQTQRVAGTIDKIEGKTLYIK
Ga0311338_109800903	3300030007	Palsa	MSTMRVLTAAAFATVFAVSTASAQQAQRVAGTIDKVEGNTLYIKSANGPVSLTL
Ga0311354_110799281	3300030618	Palsa	MSTMRVLTAAAFATVFAVSTASAQQAQRVAGTIDKVEGDTLY
Ga0307482_10951261	3300030730	Hardwood Forest Soil	MSTMRILTAAAFATVFAVATASAQQTQRINGTIDKVEGNTLFIKAEGGPLT
Ga0302325_119886052	3300031234	Palsa	MSTMRILTAAAFATVFAVSTASAQQAQRVAGTIDKVEGNTLYIKSASGPVSLTLADNALIVAR
Ga0302324_1021825591	3300031236	Palsa	MSTMRVMAAAALAAVFAVSTASAQQPTQRVAGTIDKVEGK
Ga0318528_101687991	3300031561	Soil	MSTMRIMTAAALAVVFAVATASAQQAATQRVAGTLDKVEGNTLYIKAA
Ga0318542_104643412	3300031668	Soil	MSTMRIPTAAALAVVFAVATASAQQPATQRVAGTLDKVEG
Ga0318560_102300881	3300031682	Soil	MSTMRMMTAAALAAVFAVSTASAQQPTTQRVAGTLD
Ga0310686_1071729383	3300031708	Soil	MSTMRILSAAAFATVIAVSAASAQQQTQRVAGTIDKVEGNTLYI
Ga0306917_112856851	3300031719	Soil	MSTMRITTAAALAVVFAVATASAQQPATQRVAGTLDKVEGNTLYIKAAGGPVILKLADNALVVARIKA
Ga0318576_103057501	3300031796	Soil	MSTMRIMAAAGLAAVFAVSTAWAQQQTQRVAGTIDKVVGFTLYIKSASGPVSLTLTD
Ga0318567_107516401	3300031821	Soil	MSTMRITTAAALAVVFAVATASAQQPATQRVAGTLDKVEGNTLYIKAASGPVILKLADNALIV
Ga0318517_101739992	3300031835	Soil	MNTMRIMTAAVLAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYIKA
Ga0306919_105468511	3300031879	Soil	MSTMRIMTAAALAAVFAVSTASAQQSTTQRVAGTLDKVEGNTLY
Ga0306921_101094625	3300031912	Soil	MSTMRIMMAAAVAAVFAVSTASAQQPATQRVAGTLDKVEGNTLYIKAASGPVILKLAD
Ga0310912_101288253	3300031941	Soil	MSTMRITTAAALAVVFAVATASAQQAATQRVAGTLDKVEGNTLYIKAASGPVIL
Ga0310909_108296872	3300031947	Soil	MSTMRIMAAAGLAAVFAVSTAWAQQQTQRVAGTIDKVEGNTLYIKSASGPVSLTLTDNALIV
Ga0306926_101074565	3300031954	Soil	MSTMRIMMAAAVAAVFAVSTASAQQPATQRVAGTLDKVEGNTLYIKAASGPVILKLADNALVAARIKA
Ga0306926_106199403	3300031954	Soil	MRVMAAAALAALFAVSTAWGQQQTQRVAGTIDKVEGKTLYIKSASGPVT
Ga0306924_120722261	3300032076	Soil	MSTMRIMMAAALAAVFAVSTAFAQQPTTQRVAGTLDKVEGNTLYIKAASGPVILKLADNALIVARIKASATDI
Ga0310914_101395851	3300033289	Soil	MNTMRIMTAAVLAAVFAVSTASAQQPTTQRVAGTLDKVEGNTLYI
Ga0310914_111262371	3300033289	Soil	MTAAALAAVFAVSTASAQQSTTQRVAGTLDKVEGNTLYIKA
Ga0318519_109623832	3300033290	Soil	MSTMRTMAAAGFAAVFGFHAWAQQQTQRVAGTIDKPKGKTLYIRSATGLTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072717

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences