Metagenome Family F072701

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072701
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	64 residues
Representative Sequence	MSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG
Number of Associated Samples	98
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.75 %
% of genes near scaffold ends (potentially truncated)	28.10 %
% of genes from short scaffolds (< 2000 bps)	79.34 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.504 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.099 % of family members)
Environment Ontology (ENVO)	Unclassified (32.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.719 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.87% β-sheet: 0.00% Coil/Unstructured: 39.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF07690	MFS_1	3.31
PF04392	ABC_sub_bind	2.48
PF01382	Avidin	1.65
PF01266	DAO	1.65
PF03734	YkuD	0.83
PF02894	GFO_IDH_MocA_C	0.83
PF00202	Aminotran_3	0.83
PF13676	TIR_2	0.83
PF13505	OMP_b-brl	0.83
PF10282	Lactonase	0.83
PF13358	DDE_3	0.83
PF06577	EipA	0.83
PF01722	BolA	0.83
PF00011	HSP20	0.83
PF04226	Transgly_assoc	0.83
PF13570	PQQ_3	0.83
PF01223	Endonuclease_NS	0.83
PF05239	PRC	0.83
PF09992	NAGPA	0.83
PF00196	GerE	0.83
PF05532	CsbD	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.48
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.83
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.83
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.83
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.50 %
Unclassified	root	N/A	40.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.50 %
Unclassified	root	N/A	40.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.50 %
Unclassified	root	N/A	40.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.37 %
Unclassified	root	N/A	40.50 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	47.93 %
Unclassified	root	N/A	40.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	22.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.92 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.31 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.48 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.65 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.48 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.65 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.48 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.83 %
unclassified Tardiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga	0.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.83 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.48 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.83 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.83 %
Tardiphaga sp. vice352	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	0.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02F22EV	Not Available	516	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1997874	Not Available	587	Open in IMG/M
3300000443\|F12B_11837717	Not Available	533	Open in IMG/M
3300001661\|JGI12053J15887_10315039	Not Available	762	Open in IMG/M
3300002906\|JGI25614J43888_10008845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3262	Open in IMG/M
3300002907\|JGI25613J43889_10030809	Not Available	1518	Open in IMG/M
3300003911\|JGI25405J52794_10082672	Not Available	707	Open in IMG/M
3300004633\|Ga0066395_10135866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1230	Open in IMG/M
3300005171\|Ga0066677_10474487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300005172\|Ga0066683_10761683	Not Available	567	Open in IMG/M
3300005174\|Ga0066680_10204348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1249	Open in IMG/M
3300005177\|Ga0066690_10276980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300005181\|Ga0066678_10940104	Not Available	563	Open in IMG/M
3300005187\|Ga0066675_10012819	All Organisms → cellular organisms → Bacteria	4482	Open in IMG/M
3300005187\|Ga0066675_10525186	Not Available	886	Open in IMG/M
3300005332\|Ga0066388_107023867	Not Available	566	Open in IMG/M
3300005446\|Ga0066686_10058843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2371	Open in IMG/M
3300005468\|Ga0070707_100398592	Not Available	1336	Open in IMG/M
3300005471\|Ga0070698_100689623	Not Available	963	Open in IMG/M
3300005552\|Ga0066701_10136604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1466	Open in IMG/M
3300005554\|Ga0066661_10018213	All Organisms → cellular organisms → Bacteria → Proteobacteria	3679	Open in IMG/M
3300005557\|Ga0066704_10844415	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005559\|Ga0066700_10354051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1037	Open in IMG/M
3300005568\|Ga0066703_10538338	Not Available	688	Open in IMG/M
3300005598\|Ga0066706_10713320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300005713\|Ga0066905_100345688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1186	Open in IMG/M
3300005713\|Ga0066905_100353224	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300005764\|Ga0066903_100027746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6294	Open in IMG/M
3300005981\|Ga0081538_10148121	Not Available	1068	Open in IMG/M
3300006046\|Ga0066652_100593497	Not Available	1043	Open in IMG/M
3300006049\|Ga0075417_10131325	Not Available	1155	Open in IMG/M
3300006172\|Ga0075018_10698855	Not Available	548	Open in IMG/M
3300009012\|Ga0066710_100662594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1588	Open in IMG/M
3300009012\|Ga0066710_104640331	Not Available	513	Open in IMG/M
3300009012\|Ga0066710_104760958	Not Available	507	Open in IMG/M
3300009137\|Ga0066709_100897271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1291	Open in IMG/M
3300009792\|Ga0126374_10001053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7686	Open in IMG/M
3300010041\|Ga0126312_10895311	Not Available	646	Open in IMG/M
3300010046\|Ga0126384_10024010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3972	Open in IMG/M
3300010047\|Ga0126382_10598053	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300010303\|Ga0134082_10346256	Not Available	629	Open in IMG/M
3300010322\|Ga0134084_10031730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300010366\|Ga0126379_10040825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3733	Open in IMG/M
3300010375\|Ga0105239_13259745	Not Available	528	Open in IMG/M
3300010868\|Ga0124844_1046208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1503	Open in IMG/M
3300012198\|Ga0137364_10334162	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300012199\|Ga0137383_10205645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1442	Open in IMG/M
3300012199\|Ga0137383_10926378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300012200\|Ga0137382_10020671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3770	Open in IMG/M
3300012201\|Ga0137365_10104476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2131	Open in IMG/M
3300012201\|Ga0137365_10235758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1363	Open in IMG/M
3300012201\|Ga0137365_10984643	Not Available	612	Open in IMG/M
3300012202\|Ga0137363_10591382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300012204\|Ga0137374_10041778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4846	Open in IMG/M
3300012204\|Ga0137374_10178276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1859	Open in IMG/M
3300012204\|Ga0137374_10444678	Not Available	1019	Open in IMG/M
3300012205\|Ga0137362_10050200	Not Available	3397	Open in IMG/M
3300012208\|Ga0137376_10105814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2388	Open in IMG/M
3300012208\|Ga0137376_10734026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	851	Open in IMG/M
3300012209\|Ga0137379_10173032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2071	Open in IMG/M
3300012209\|Ga0137379_10207577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1873	Open in IMG/M
3300012209\|Ga0137379_10598588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300012211\|Ga0137377_10736579	Not Available	920	Open in IMG/M
3300012285\|Ga0137370_10046573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2314	Open in IMG/M
3300012285\|Ga0137370_10778060	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300012349\|Ga0137387_11213372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300012350\|Ga0137372_10328669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1177	Open in IMG/M
3300012350\|Ga0137372_10371139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300012353\|Ga0137367_10296964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1156	Open in IMG/M
3300012353\|Ga0137367_10912419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300012355\|Ga0137369_10747657	Not Available	670	Open in IMG/M
3300012356\|Ga0137371_10218613	Not Available	1490	Open in IMG/M
3300012356\|Ga0137371_10784461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300012358\|Ga0137368_10295988	Not Available	1097	Open in IMG/M
3300012358\|Ga0137368_10332494	Not Available	1016	Open in IMG/M
3300012360\|Ga0137375_10881466	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300012532\|Ga0137373_11267617	Not Available	516	Open in IMG/M
3300012923\|Ga0137359_11300325	Not Available	615	Open in IMG/M
3300012930\|Ga0137407_10882422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300012975\|Ga0134110_10038379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1882	Open in IMG/M
3300014157\|Ga0134078_10515640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300016294\|Ga0182041_11350719	Not Available	653	Open in IMG/M
3300016387\|Ga0182040_11150635	Not Available	651	Open in IMG/M
3300016404\|Ga0182037_10348754	Not Available	1205	Open in IMG/M
3300017654\|Ga0134069_1097609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	956	Open in IMG/M
3300018431\|Ga0066655_10011622	All Organisms → cellular organisms → Bacteria → Proteobacteria	3840	Open in IMG/M
3300018431\|Ga0066655_10197007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1242	Open in IMG/M
3300018431\|Ga0066655_10379860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	930	Open in IMG/M
3300018433\|Ga0066667_10503008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300018465\|Ga0190269_11316359	Not Available	579	Open in IMG/M
3300018468\|Ga0066662_10066702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2387	Open in IMG/M
3300021560\|Ga0126371_10449980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1434	Open in IMG/M
3300025922\|Ga0207646_10354010	Not Available	1327	Open in IMG/M
3300026304\|Ga0209240_1143872	Not Available	760	Open in IMG/M
3300026319\|Ga0209647_1004555	All Organisms → cellular organisms → Bacteria	10380	Open in IMG/M
3300026328\|Ga0209802_1306361	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300026494\|Ga0257159_1004627	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300026528\|Ga0209378_1248957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300026529\|Ga0209806_1167925	Not Available	816	Open in IMG/M
3300026537\|Ga0209157_1292730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300027654\|Ga0209799_1007369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2309	Open in IMG/M
3300027654\|Ga0209799_1026782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1274	Open in IMG/M
3300028878\|Ga0307278_10051347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1868	Open in IMG/M
3300028878\|Ga0307278_10535292	Not Available	511	Open in IMG/M
3300031543\|Ga0318516_10142492	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M
3300031543\|Ga0318516_10211359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1121	Open in IMG/M
3300031564\|Ga0318573_10464670	Not Available	681	Open in IMG/M
3300031572\|Ga0318515_10109561	Not Available	1454	Open in IMG/M
3300031573\|Ga0310915_10025614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3629	Open in IMG/M
3300031573\|Ga0310915_10137855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1679	Open in IMG/M
3300031668\|Ga0318542_10566632	Not Available	592	Open in IMG/M
3300031744\|Ga0306918_10008579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5676	Open in IMG/M
3300031763\|Ga0318537_10087469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1151	Open in IMG/M
3300031798\|Ga0318523_10687798	Not Available	502	Open in IMG/M
3300031890\|Ga0306925_10000347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32501	Open in IMG/M
3300032035\|Ga0310911_10095765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1621	Open in IMG/M
3300032180\|Ga0307471_101156985	Not Available	939	Open in IMG/M
3300032261\|Ga0306920_102193072	Not Available	768	Open in IMG/M
3300034090\|Ga0326723_0498071	Not Available	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.69%
Host-Associated	Host-Associated	3.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.87%
Plants	Host-Associated → Plants	3.31%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.65%
Sediment	Environmental → Aquatic → Sediment	0.83%
Peat	Environmental → Terrestrial → Peat	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.47%
Loam	Environmental → Terrestrial → Soil → Loam	11.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_06662500	2170459003	Grass Soil	MSISAYYRAQAQRCLALSRACSDRRQGAQLSFMADRYFERAQELEQAVYFRPVPTLPREDARRG
ICChiseqgaiiDRAFT_19978742	3300000033	Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYVQPTLHREDARSA*
F12B_118377172	3300000443	Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYFQPTLHREDARSA*
JGI12053J15887_103150392	3300001661	Forest Soil	GMHMSLSTYYRAQAQKCLSLSRTCSDRTQATQLAFMANRYFERAEELEQDVRLERTPVSSHDEARRPKH*
JGI25614J43888_100088456	3300002906	Grasslands Soil	MSISAYYRAQAQRCLALSRTCSDRRQGAQLSFMADRYFERAQELEQAVYFRPVPTLPREDARRG*
JGI25613J43889_100308091	3300002907	Grasslands Soil	MSMTAYYRAQAQRCLALSRSCSDRKQAAQLAFMATRYFERAEELERESRFQQIPPLDNASSRAWVL*
JGI25405J52794_100826722	3300003911	Tabebuia Heterophylla Rhizosphere	MSISTFYRAQAQRCLALSRACSDRKQEAQLSFMANRYFERAKELEQGAHVQPTLHREDARTT*
Ga0066395_101358661	3300004633	Tropical Forest Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTRALDLAEARIA*
Ga0066677_104744871	3300005171	Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELERGVPFQRTHALDLAEARIA*
Ga0066683_107616832	3300005172	Soil	MSIGTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYFQPTLHREDARRA*
Ga0066680_102043481	3300005174	Soil	TSVVHAFLDRKRQAGVPMPITSYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA*
Ga0066690_102769802	3300005177	Soil	MSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0066678_109401042	3300005181	Soil	YYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELERGVPFQRTHALDLAEARIA*
Ga0066675_100128192	3300005187	Soil	MSMSTYYRAQSQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0066675_105251863	3300005187	Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYFQPTLHREDARRA*
Ga0066388_1070238671	3300005332	Tropical Forest Soil	MSITAYYRAQAQRCLALSRSCSDRNQALQLAFMATRYFERAEELEREIPFQRTRALDLAEARIA*
Ga0066686_100588433	3300005446	Soil	MSITAYYRAQAQRCLALSRSCSDRKQVLQLAFMATRYFERAEELERGVPFQRTHALDLAEARIA*
Ga0070707_1003985922	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSMSTYYRAQAQKCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPVLHFEEARTG*
Ga0070698_1006896232	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSISAYYRAQAQRCLALSRTCSDRKQGAQLSFMADRYFERAQELEQAVYFRPVTTLPREDARRG*
Ga0066701_101366042	3300005552	Soil	MSMSTYYRAQAQKCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQLIPILHHEEARMG*
Ga0066661_100182132	3300005554	Soil	MPITSYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA*
Ga0066704_108444151	3300005557	Soil	YRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0066700_103540513	3300005559	Soil	YYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA*
Ga0066703_105383382	3300005568	Soil	MSITAYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA*
Ga0066654_105522902	3300005587	Soil	MPITSYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQR
Ga0066706_107133202	3300005598	Soil	RSRIVSSGKSKIPVQVKRMSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0066905_1003456881	3300005713	Tropical Forest Soil	MSMSRYYRAQAQRCLALSRAFSDPRQGAQLAFMANRYFQRAEESERETRFQAASGLSQEEARAG*
Ga0066905_1003532242	3300005713	Tropical Forest Soil	MSMSRYYRAQAQRCLALSRAFSDPRQGAQLAFMANRYFQRAEELEREARFQTTSVLPHEEARAG*
Ga0066903_1000277467	3300005764	Tropical Forest Soil	MSMSTYYRVQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTRHHHEEARIA*
Ga0081538_101481213	3300005981	Tabebuia Heterophylla Rhizosphere	MSISTFYRAQAQRCLALSRACSDRKQEAQLSFMANRYFERAKELEQGAHVQPTLHREDARRA*
Ga0066652_1005934971	3300006046	Soil	SITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELERGVPFQRTHALDLAEARIA*
Ga0075417_101313252	3300006049	Populus Rhizosphere	MSMSTYYRAQAQRCLALSRACSDRKQGAQLAFIANRYFERAKELEQEVRFQSTPVLHYEEARTG*
Ga0075018_106988551	3300006172	Watersheds	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREILFQRTHA
Ga0066710_1006625941	3300009012	Grasslands Soil	QRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQLIPILHHEEARMG
Ga0066710_1046403311	3300009012	Grasslands Soil	MSMSTYYRAQAQKCLALSLACSDREQGAQLAFMANRYFERAKGLEQEVRFQSIPVLHFEEARTG
Ga0066710_1047609583	3300009012	Grasslands Soil	YRAQAQRCLVLSRACSDRKQRAQLALMANRYFERAKELEQAVRFQTRLHYEEARIA
Ga0066709_1008972712	3300009137	Grasslands Soil	MSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQLIPILHHEEARMG*
Ga0126374_100010537	3300009792	Tropical Forest Soil	MSMSRYYRAQAQRCLALSRAFSDPRQGAQLAFMANRYFQRAEELEREARFQTTSVLPHDEARAG*
Ga0126312_108953111	3300010041	Serpentine Soil	MSISTFYRAEAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYVQPTLHREDARRA*
Ga0126384_100240107	3300010046	Tropical Forest Soil	MSITAYYRAQAQSCLALSRSCSDRNQALQLAFMATRYFERAEELEREIPFQRTRALDLAEARIA*
Ga0126382_105980532	3300010047	Tropical Forest Soil	MSMSRYYRAQAQRCLALSRAFSDPRQGAQLAFMANRYFQRAEELERETRFQAASGLSQEEARAG*
Ga0134082_103462562	3300010303	Grasslands Soil	MSISTFYRVQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYFQPTLHREDARRA*
Ga0134084_100317301	3300010322	Grasslands Soil	FLDRKRQAGVPMPITSYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELERGVPFQRTHALDLAEARIA*
Ga0126379_100408255	3300010366	Tropical Forest Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDLAEARIA*
Ga0105239_132597451	3300010375	Corn Rhizosphere	MSMSTYYRAQAQRCLALSRACSDRKQAAQLSFMANRYFERAKELEQEVRFQSTPVLHYEEARTA*
Ga0124844_10462083	3300010868	Tropical Forest Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTRALDLAEAWIA*
Ga0137364_103341622	3300012198	Vadose Zone Soil	VRRSRIVSSGKSKIPVQVKRMSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0137383_102056453	3300012199	Vadose Zone Soil	MSMSTYYRAQAQKCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSSPILHHEEARMG*
Ga0137383_109263781	3300012199	Vadose Zone Soil	SAKVCLALSRACSDRKQGAHLAFMANRYFERAKELEQEVRFQSIPVLHFEEARTG*
Ga0137382_100206712	3300012200	Vadose Zone Soil	MSMSTYYRAQAQKCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0137365_101044763	3300012201	Vadose Zone Soil	MSMSTYYRAQAQKCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPVLHFDEARTG*
Ga0137365_102357581	3300012201	Vadose Zone Soil	MSMSTYYRAQAQRCLALSRACSDRKQRAQLALMANRYFERAKELEQAVRFQTRFHYDEARIA*
Ga0137365_109846431	3300012201	Vadose Zone Soil	MSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSSPILHHEEARMG*
Ga0137363_105913821	3300012202	Vadose Zone Soil	MSMSTYYRAQAQKCLALSRACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0137374_100417785	3300012204	Vadose Zone Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAQELEQGAYFQPTLHREDARRA*
Ga0137374_101782762	3300012204	Vadose Zone Soil	MSMSAYYRAQAQRCLALSRAFSDRRQGAQLAFMANRYFDRAEELEREAGFQTTSVLHHEEARTG*
Ga0137374_104446782	3300012204	Vadose Zone Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYVQPTLHHEDARSA*
Ga0137362_100502001	3300012205	Vadose Zone Soil	MSMTAYYRAQAQRCLALSRSCSDRKQAAQLAFMATRYFERAEELERESRFQQIPALDNASSRAWVL*
Ga0137376_101058145	3300012208	Vadose Zone Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYVRPTLHREDARRA*
Ga0137376_107340261	3300012208	Vadose Zone Soil	SRIVSSGKSKIPVRVNFMSMSTYYRAQAQRCLALSRACSDRKQGEQLAFMANRYFERAKELEQEVRFQSIPVLHFDEARTG*
Ga0137379_101730323	3300012209	Vadose Zone Soil	MSMSTYYRAQAQRCLVLSRACSDRKQRAQLALMANRYFERAKELEQAVRFQTRLHYEEARIA*
Ga0137379_102075773	3300012209	Vadose Zone Soil	MSIAAYYRAQAQRCLTLSRSCSDRKQALQLAFMATRYFEWAEELEGEIHFQQTPALDNALSRAWVL*
Ga0137379_105985882	3300012209	Vadose Zone Soil	MKLMSMSTYYRAQAQKCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPVLHFEEARTG*
Ga0137377_107365792	3300012211	Vadose Zone Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGACFQPTLHREDARRA*
Ga0137370_100465734	3300012285	Vadose Zone Soil	MSITAYYRAQAQRCLALSRSCSDRKQVLQLAFMATRYFERAEELERGGPFQRTHALDLAEARIA*
Ga0137370_107780602	3300012285	Vadose Zone Soil	MSISAYYRAQAQRCLALSRACSDRKQGAQLSFMANRYFERAKELEQGVYFQPTL
Ga0137387_112133721	3300012349	Vadose Zone Soil	MSMSTYYRAQAQRCLALSRACSDRNQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARTG*
Ga0137372_103286691	3300012350	Vadose Zone Soil	MSAYYRAQAQRCLALSRAFSDRRQGVQLAFMANRYFERAEELERAISFQTSSVLHHGEARTG
Ga0137372_103711393	3300012350	Vadose Zone Soil	RVSEPMSISAYYRAQAQRCLALSRACSDRKQGAQLSFMANRYFERAKELEQGVYFQPTLHHEEARRA*
Ga0137367_102969643	3300012353	Vadose Zone Soil	MSISAYYRAQAQRCLALSRACSDRKQGAQLSFMANRYFERAKELEQGVYFQPTLHHEEARRA*
Ga0137367_109124192	3300012353	Vadose Zone Soil	MSMSTYYRAQAQKCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0137369_107476572	3300012355	Vadose Zone Soil	MGKSKIPVQVKLMSMSTYYRAQAQKCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPVLHFDEARTG*
Ga0137371_102186132	3300012356	Vadose Zone Soil	MSMSTYYRAQAQRCLVLSRACSDGKQRAQLALMANRYFERAKELEQAVRFQTRFHYDEARIA*
Ga0137371_107844612	3300012356	Vadose Zone Soil	MSMSTYYRAQAQKCLALSLACSDREQGAQLALMANRYFERAKGLEQEVRFQSIPVLHFEEARTG*
Ga0137368_102959881	3300012358	Vadose Zone Soil	MSMSEYYRAQAQRCLALSRAFSDRRQGAQLAFMANRYFDRAEELEREAGFQTTSVLHHEEARTG*
Ga0137368_103324943	3300012358	Vadose Zone Soil	MSMSTYYRAQAQRCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPVLHFDEARTG*
Ga0137375_108814661	3300012360	Vadose Zone Soil	MSMSTYYRAQAQKCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSSPILHHEEARTG*
Ga0137373_112676171	3300012532	Vadose Zone Soil	MKRISMSTYYRAQAQKCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPVLHFDEARTG*
Ga0137359_113003251	3300012923	Vadose Zone Soil	QGKLMSMSAYYRAQAHKCLALSRAFSDRRQGAQLAFMANRYFERAEELEREVSFQTTSVLHHEARTG*
Ga0137407_108824222	3300012930	Vadose Zone Soil	AQKCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSSPILHHEEARMG*
Ga0134110_100383793	3300012975	Grasslands Soil	SVVHAFLDRKRQAGVPMPITSYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA*
Ga0134078_105156402	3300014157	Grasslands Soil	VQVKRMSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG*
Ga0182041_113507192	3300016294	Soil	MSTYYRTQAQKCLALSRACSDRTQRVQLLVMANRYFERAEELEQAVRFQTRHHYEEARIA
Ga0182040_111506351	3300016387	Soil	MSTYYRTQAQKCLALSRACSDRTQRVQLLVMAKRYFERAEELEQAVRFQTRHHYEEARIA
Ga0182037_103487543	3300016404	Soil	MLMSTYYRTQAQKCLALSRACSDRTQRVQLLVMANRYFERAEELEQAVRFQTRHHYEEARIA
Ga0134069_10976091	3300017654	Grasslands Soil	MPITSYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHAL
Ga0066655_100116222	3300018431	Grasslands Soil	MPITSYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA
Ga0066655_101970073	3300018431	Grasslands Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYFQPTLHREDARRA
Ga0066655_103798602	3300018431	Grasslands Soil	MSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIP
Ga0066667_105030083	3300018433	Grasslands Soil	SYYRAQAQRCLVLSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA
Ga0190269_113163592	3300018465	Soil	MSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYVQPTLHREDARSA
Ga0066662_100667022	3300018468	Grasslands Soil	MSMSTYYRAQSQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG
Ga0126371_104499802	3300021560	Tropical Forest Soil	MSMSRYYRAQAQRCLALSRAFSDPRQGAQLAFMANRYFQRAEELEREARFQTTSVLPHEEARAG
Ga0207646_103540101	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSMSTYYRAQAQKCLALSLACSDRKQGAQLAFMANRYFERAKELEQEVRFQSIPVLHFEEARTG
Ga0209240_11438721	3300026304	Grasslands Soil	MSMTAYYRAQAQRCLALSRSCSDRKQAAQLAFMATRYFERAEELERESRFQQIPPLDNASSRAWVL
Ga0209647_10045553	3300026319	Grasslands Soil	MSISAYYRAQAQRCLALSRTCSDRRQGAQLSFMADRYFERAQELEQAVYFRPVPTLPREDARRG
Ga0209802_13063612	3300026328	Soil	MSMSTYYRAQAQRCLALSRACSDRKQAAQLAFMANRYFERAKELEQEVRFQSIPILHHEEARMG
Ga0257159_10046273	3300026494	Soil	MSISAYYRAQAQRCLALSRTCSDRRQGAELSFMADRYFERAQELEQAVYFRPVPTLPREDARRG
Ga0209378_12489571	3300026528	Soil	LQQKRERCLVLSRSCSDRKQALQLAFMATRYFERAEELEPGVPFQRTHALDLAEARIA
Ga0209806_11679251	3300026529	Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDPAEARIA
Ga0209157_12927301	3300026537	Soil	SITAHYRAQAQRCLALSRSYSDRKQALQLAFMATRYFERAEELERGVPFQRTHALDLAEARIA
Ga0209799_10073693	3300027654	Tropical Forest Soil	MSMSRYYRAQAQRCLALSRAFSDPRQGAQLAFMANRYFQRAEELEREARFQTTSVLPHEE
Ga0209799_10267822	3300027654	Tropical Forest Soil	MSITAYYRAQAQRCLALSRSCSDRNQALQLAFMATRYFERAEELEREIPFQRTRALDLAEARIA
Ga0307278_100513474	3300028878	Soil	MSMSAYYRAQAQRCLALSRAFSDRRQGVQLAFLANRYFERAEELERAVSFQTSSVRHHGEVRTG
Ga0307278_105352921	3300028878	Soil	PMSISTFYRAQAQRCLALSQACSDRKQGAQLSFMANRYFERAKELEQGAYVQPTLHHEDARSA
Ga0318516_101424922	3300031543	Soil	MSTYYRAQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTYEEARVA
Ga0318516_102113593	3300031543	Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREIPFQRTHALDLAEARIA
Ga0318573_104646701	3300031564	Soil	MSTYYRAQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTRHHHEEARIA
Ga0318515_101095613	3300031572	Soil	MSTYYRAQAQRCLALSRACFDGKQRVQLLLMANRYFERAEELEQTVRFQTRHHYEGAPLHRA
Ga0310915_100256144	3300031573	Soil	MSTYYRVQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTRHHHEEARIA
Ga0310915_101378553	3300031573	Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREIPFQPTHALDLAEARIA
Ga0318542_105666321	3300031668	Soil	MSTYYRTQAQRCLALSRACSDRTQRVQLLVMANRYFERAEELEQAVRFQTRHHYEEARIA
Ga0306918_100085791	3300031744	Soil	MSMSTYYRVQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTRHHHEEARIT
Ga0318537_100874693	3300031763	Soil	MSTYYRAQAQRCLALSRACSDRTQRMQLLLLANRYFERAEELEQAVRFQTYEEARVA
Ga0318523_106877981	3300031798	Soil	RGAMSMSTYYRAQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTYEEARVA
Ga0306925_100003476	3300031890	Soil	MSMSTYYRVQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTRHHHEEARIA
Ga0318520_104079392	3300031897	Soil	MSTYYRVQAQRCLALSRACSDRTQRMQLLLMANRYFERAEELEQAVRFQTR
Ga0310911_100957653	3300032035	Soil	MSITAYYRAQAQRCLALSRSCSDRKQALQLAFMATRYFERAEELEREIPFQPTHALDLAEARI
Ga0307471_1011569852	3300032180	Hardwood Forest Soil	MSISAYYRAQAQRCLALSRTCSDRRQGAQLSFMADRYFERAQELEQAVYFRLVPTLSREDARRG
Ga0306920_1021930722	3300032261	Soil	PSFRGAMLMSTYYRTQAQRCLALSRACSDRTQRVQLLVMANRYFERAEELEQAVRFQTRHHYEEARIA
Ga0326723_0498071_242_442	3300034090	Peat Soil	MSLSTYYRAQAQKCLSLSRACSDRTQATQLAFMANRYFERAEELEQDVRLERTPVSSQGETHRPKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072701

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences