Metagenome / Metatranscriptome Family F072694

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072694
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	116 residues
Representative Sequence	MRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTAHWAELGSGVTSNIHPLLAYLPPQPHPALRSNYENPLRPVRGPPAN
Number of Associated Samples	95
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.36 %
% of genes near scaffold ends (potentially truncated)	40.50 %
% of genes from short scaffolds (< 2000 bps)	73.55 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.298 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.273 % of family members)
Environment Ontology (ENVO)	Unclassified (41.322 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.240 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.58% β-sheet: 0.00% Coil/Unstructured: 78.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04342	DMT_6	22.31
PF13620	CarboxypepD_reg	15.70
PF13442	Cytochrome_CBB3	12.40
PF07681	DoxX	1.65
PF13305	TetR_C_33	0.83
PF13564	DoxX_2	0.83
PF01977	UbiD	0.83
PF08818	DUF1801	0.83
PF13432	TPR_16	0.83
PF09912	DUF2141	0.83
PF00583	Acetyltransf_1	0.83
PF01740	STAS	0.83
PF00903	Glyoxalase	0.83
PF00578	AhpC-TSA	0.83
PF12412	DUF3667	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	22.31
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.65
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.65
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.83
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.83
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.30 %
Unclassified	root	N/A	15.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.30 %
Unclassified	root	N/A	15.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.30 %
Unclassified	root	N/A	15.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.80 %
Unclassified	root	N/A	15.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	25.62 %
Unclassified	root	N/A	15.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	25.62 %
Unclassified	root	N/A	15.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.70 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	13.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.70 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	13.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_102940250	Not Available	637	Open in IMG/M
3300004479\|Ga0062595_100075445	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300004479\|Ga0062595_100132327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1409	Open in IMG/M
3300005293\|Ga0065715_10865027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005329\|Ga0070683_100009578	All Organisms → cellular organisms → Bacteria	8293	Open in IMG/M
3300005367\|Ga0070667_100052399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3443	Open in IMG/M
3300005436\|Ga0070713_100570575	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005445\|Ga0070708_100135851	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300005445\|Ga0070708_100636378	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300005458\|Ga0070681_10228790	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300005466\|Ga0070685_10833374	Not Available	682	Open in IMG/M
3300005467\|Ga0070706_100001872	All Organisms → cellular organisms → Bacteria	21734	Open in IMG/M
3300005538\|Ga0070731_10065242	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300005564\|Ga0070664_101865677	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005610\|Ga0070763_10531735	Not Available	675	Open in IMG/M
3300005614\|Ga0068856_100960870	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300005615\|Ga0070702_100517643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300005995\|Ga0066790_10204975	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	843	Open in IMG/M
3300006050\|Ga0075028_100000439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15118	Open in IMG/M
3300006052\|Ga0075029_100197590	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300006052\|Ga0075029_101100493	Not Available	552	Open in IMG/M
3300006059\|Ga0075017_101099565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	621	Open in IMG/M
3300006102\|Ga0075015_100786133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006173\|Ga0070716_100046843	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300006174\|Ga0075014_100579707	Not Available	639	Open in IMG/M
3300006175\|Ga0070712_100215877	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300006176\|Ga0070765_100961900	Not Available	807	Open in IMG/M
3300006354\|Ga0075021_10056009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2286	Open in IMG/M
3300006904\|Ga0075424_100303695	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300006914\|Ga0075436_101397798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	530	Open in IMG/M
3300007258\|Ga0099793_10462982	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300009038\|Ga0099829_10000065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	48920	Open in IMG/M
3300009038\|Ga0099829_10037348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3511	Open in IMG/M
3300009038\|Ga0099829_10289495	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300009038\|Ga0099829_11701093	Not Available	519	Open in IMG/M
3300009088\|Ga0099830_10108628	All Organisms → cellular organisms → Bacteria → Acidobacteria	2082	Open in IMG/M
3300009088\|Ga0099830_10441679	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300009088\|Ga0099830_11633698	Not Available	537	Open in IMG/M
3300009089\|Ga0099828_10000037	All Organisms → cellular organisms → Bacteria	59393	Open in IMG/M
3300009089\|Ga0099828_10226226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1673	Open in IMG/M
3300009090\|Ga0099827_10042226	All Organisms → cellular organisms → Bacteria → Acidobacteria	3378	Open in IMG/M
3300009101\|Ga0105247_11841980	Not Available	505	Open in IMG/M
3300009174\|Ga0105241_11031546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	771	Open in IMG/M
3300009174\|Ga0105241_12689224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	501	Open in IMG/M
3300009176\|Ga0105242_10304338	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300010371\|Ga0134125_10234040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2042	Open in IMG/M
3300010371\|Ga0134125_12259457	Not Available	591	Open in IMG/M
3300010400\|Ga0134122_10494921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1105	Open in IMG/M
3300010403\|Ga0134123_11282037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300011270\|Ga0137391_10745124	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300011271\|Ga0137393_10895427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300011271\|Ga0137393_11349328	Not Available	602	Open in IMG/M
3300011444\|Ga0137463_1256864	Not Available	651	Open in IMG/M
3300012096\|Ga0137389_10667737	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300012189\|Ga0137388_10364398	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300012203\|Ga0137399_10065022	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300012363\|Ga0137390_10101510	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300012363\|Ga0137390_10301004	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300012915\|Ga0157302_10276315	Not Available	641	Open in IMG/M
3300012917\|Ga0137395_10082205	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300012929\|Ga0137404_10032415	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300012929\|Ga0137404_10248317	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300012929\|Ga0137404_10872231	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300012930\|Ga0137407_10238339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1645	Open in IMG/M
3300012961\|Ga0164302_11353788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	578	Open in IMG/M
3300012984\|Ga0164309_11405712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300015264\|Ga0137403_10042280	All Organisms → cellular organisms → Bacteria	4747	Open in IMG/M
3300015264\|Ga0137403_10768219	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300017927\|Ga0187824_10102953	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300017930\|Ga0187825_10049624	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300017936\|Ga0187821_10061711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1352	Open in IMG/M
3300017936\|Ga0187821_10084711	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300017947\|Ga0187785_10059331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1452	Open in IMG/M
3300017994\|Ga0187822_10007657	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300020579\|Ga0210407_10750195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300020581\|Ga0210399_10146088	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300020581\|Ga0210399_10237828	All Organisms → cellular organisms → Bacteria → Acidobacteria	1517	Open in IMG/M
3300020583\|Ga0210401_10251981	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300021088\|Ga0210404_10636817	Not Available	607	Open in IMG/M
3300021178\|Ga0210408_10348786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300021180\|Ga0210396_10289369	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300021420\|Ga0210394_10112431	All Organisms → cellular organisms → Bacteria	2357	Open in IMG/M
3300021432\|Ga0210384_10398681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1239	Open in IMG/M
3300021432\|Ga0210384_10988848	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300021432\|Ga0210384_11543242	Not Available	570	Open in IMG/M
3300021478\|Ga0210402_10379864	All Organisms → cellular organisms → Bacteria → Acidobacteria	1311	Open in IMG/M
3300021479\|Ga0210410_10809403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	822	Open in IMG/M
3300022533\|Ga0242662_10283998	Not Available	547	Open in IMG/M
3300024182\|Ga0247669_1042224	Not Available	761	Open in IMG/M
3300025899\|Ga0207642_10809301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	596	Open in IMG/M
3300025900\|Ga0207710_10217019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	949	Open in IMG/M
3300025900\|Ga0207710_10517268	Not Available	620	Open in IMG/M
3300025904\|Ga0207647_10079041	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300025912\|Ga0207707_10449554	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300025920\|Ga0207649_10077721	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300025926\|Ga0207659_10490873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300025927\|Ga0207687_10406043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1121	Open in IMG/M
3300026035\|Ga0207703_10686721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	973	Open in IMG/M
3300026555\|Ga0179593_1223916	All Organisms → cellular organisms → Bacteria	3593	Open in IMG/M
3300026557\|Ga0179587_10026373	All Organisms → cellular organisms → Bacteria	3184	Open in IMG/M
3300027738\|Ga0208989_10169509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300027846\|Ga0209180_10118069	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300027846\|Ga0209180_10253143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300027862\|Ga0209701_10000331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26721	Open in IMG/M
3300027862\|Ga0209701_10089764	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300027869\|Ga0209579_10425065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	720	Open in IMG/M
3300027894\|Ga0209068_10000166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	40482	Open in IMG/M
3300027903\|Ga0209488_10379247	Not Available	1048	Open in IMG/M
3300028828\|Ga0307312_10288348	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300028828\|Ga0307312_10574115	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300029636\|Ga0222749_10509281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300031716\|Ga0310813_10071209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2626	Open in IMG/M
3300031720\|Ga0307469_10012736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4226	Open in IMG/M
3300031740\|Ga0307468_101849762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	573	Open in IMG/M
3300031962\|Ga0307479_10149973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2287	Open in IMG/M
3300032180\|Ga0307471_100071983	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300032180\|Ga0307471_100092904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2706	Open in IMG/M
3300032180\|Ga0307471_101658479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300032205\|Ga0307472_100344253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1221	Open in IMG/M
3300032893\|Ga0335069_10275067	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300033412\|Ga0310810_11474273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.12%
Host-Associated	Host-Associated	14.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.73%
Plants	Host-Associated → Plants	14.88%
Aquatic	Environmental → Aquatic	12.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.74%
Sediment	Environmental → Aquatic → Sediment	7.44%
Freshwater	Environmental → Aquatic → Freshwater	4.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.13%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.68%
Loam	Environmental → Terrestrial → Soil → Loam	11.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1029402501	3300004092	Bog Forest Soil	MYRLTARLLLILLLAVAFVPVGMAISAPVPHACCMRKPMRDHGSAGYEVKEVNSRTGNCCPPVKTAQWAELDSGIASNAHPLLAYLSPDAHPILHSDHAIALRPVRGP
Ga0062595_1000754451	3300004479	Soil	MYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0062595_1001323272	3300004479	Soil	MYRLTARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTVEVRAVDGRNGNCCPPATTAHWAELESGIDSSVHLLLACLPPDLHSIRLTHQANALRPVRGPPLS*
Ga0065715_108650272	3300005293	Miscanthus Rhizosphere	GRHLRAGLASPMLGASSCDPAMYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0070683_1000095788	3300005329	Corn Rhizosphere	MYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGQDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0070667_1000523994	3300005367	Switchgrass Rhizosphere	MYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHNHGSGVSEVQAVGGQDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0070713_1005705753	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLTARLLLVLLLVGTLAPVALAISAPSAHACCMRKPMHDHGSRSLASQVADGENHNCCPPVTTAHWAELEAGTSTSIQPPLAYLPPDSRPMLRSNHENDLRPVRGPPLG*
Ga0070708_1001358511	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KPAMHRLTARLLLVLLLVCTFAPVALAISAPVPHACCMRKSLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0070708_1006363782	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLWTRSLPDYEPAMRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTAHWAELGSGVTSNIHPLLAYLPPQPHPALRSNYENALRPVRGPPAN*
Ga0070681_102287903	3300005458	Corn Rhizosphere	MLVTGSCDPTMYRLTARLLLVFLLSGIFVPVGLAISAPLPHACCVRETAYHHGSGVSEVQAVGGQNRNCCPPIATAHWADLGPGIDSGTHPLLAYLSPDMHPALRGNFVHALRPGRGPPLS*
Ga0070685_108333741	3300005466	Switchgrass Rhizosphere	TARLMLVFLLAGVFVPVGMAFSVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0070706_10000187216	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLTARLLLVLLLVGTFAPVALAISAPVPHACCMRKSLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0070731_100652422	3300005538	Surface Soil	MYRLTARLLLVLLLAGTLVPAALAIAALPPHACCTRKPMHQHGSGSREIRATGSQSRNCCPPVTTAHWAELGAGIDASLHPLLTSLTADPHSVRLSKQVNPLRPVRGPPLS*
Ga0070664_1018656771	3300005564	Corn Rhizosphere	MLVATEVMHRLTARLLLVFLLAGVFVPVGMAISAPLPHACCMRKAMHDHGSGSHEIQAVGGRNGNCCPPVTTAHWAELGSGIDSTLRPLLSFLTPDSHPVLHS
Ga0070763_105317351	3300005610	Soil	DTCTLALRPLCLWREARKSRAPKPVMYRLTAKLLLVLLLAGTFAPVALSISAPLPHACCLRKPMHDLGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS*
Ga0068856_1009608701	3300005614	Corn Rhizosphere	RPQPVSLMLVATEVMHRLTARLLLVFLLAGVFVPVGMAISAPLPHACCMRKAMHDHGSGSHEIQAVGGRNGNCCPPVTTAHWAELGSGIDSTLRPLLSFLTPDSHPVLHSDYSNSLQPVRGPPLS*
Ga0070702_1005176431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ETSGRHLRAGLASPMLGASSCDPAMYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0066790_102049752	3300005995	Soil	MYRLTARLLLVLLLTGTFVPVAMAISAPVPHACCMRKPMHDHGSGTREVRAMDGQNRNCCPPVTTAHWADLGSGINSNIHPLLASLCPDSHP
Ga0075028_10000043911	3300006050	Watersheds	MHRLTARLLLVLTLVGSLAPVALAVSAPPPHACCMRKPMHDRRSRSFQTQTVDTGHHNCCPPVTTAHWAEPGSGINSNVHPALAYLPRLANTALRNFFENALRPVRGPPLG*
Ga0075029_1001975902	3300006052	Watersheds	MRIFSSSARRAIKGNITRLAREPSLAYPLDQKFRDLDPAMHRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRNLEFQAVGGEHHNCCPPVTTAHWAELGSTTNTNTHPPLAYLPLDSRPIVRHSFENVLRPVRGPPLA*
Ga0075029_1011004931	3300006052	Watersheds	TGVPARPPLSSSWTGEGARRSIESDSRRTMPPCSNVTFRDLRPRPGVAYPLDEKFAGLSPFCPDHEPVMHRLTARLLLVLTLVGSLAPVALAVSAPPPHACCMRKPLHDQGSRSFQTQTVDTGHHNCCPPVTTAHWAEPGSGINSNVHPALAYLPRLANTALRNFFENALRPVRGPPLG*
Ga0075017_1010995651	3300006059	Watersheds	MPPCSNVTFRDLRPRPGVAYPLDEKFAGLSPFCPDHEPVMHRLTARLLLVLTLVGTLAPVALAVSAPPPHACCMRKPMHDQGSRSFQTQTVDTGHHNCCPPVTTAHWAEPGSGINSNVHPALAYLPRLANTA
Ga0075015_1007861331	3300006102	Watersheds	FSSSARRAIKGNITRLAREPSLAYPLDQKFRDLDPAMHRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRNLEFQAVGGEHHNCCPPVTTAHWAELGSTTNTNTHPPLAYLPLDSRPIVRHSFENVLRPVRGPPLA*
Ga0070716_1000468434	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLTARWLLVLMLVGTLAPVALAISATPPHACCMRKPMHERASRSFELQNVGGEHRNCCPPVTTVQWAELGSGIDSNIHSLLAYLPSQSRPAWRSNCENLLRPVRGPPVS*
Ga0075014_1005797071	3300006174	Watersheds	MYRLTARLLLVLLLAGTFVPVALAISAPVPHACCMRKPVHDHGSGSREIQAVDGQHHNCCPPVTTAHWAELESGTDSNIHSLVASLSPDLHQVRLTYQPNALR
Ga0070712_1002158772	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MYRLTARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTLEVRAVDSRNGNCCPPATTAHWAELESGIDSSVHLLLACLPPDLHSIRLTHQANALRPVRGPPLS*
Ga0070765_1009619002	3300006176	Soil	MYRLTARLLLVLLLAGTLVPATLAIAALPPHACCTRKPMHEHGSGSREIRATGSQSRNCCPPVTTAHWAELGAGVDASVHPLLTSLSADPHSARLSKQVNTLRPVRGPPLS*
Ga0075021_100560094	3300006354	Watersheds	MYRLTARLLLVLLLASTLVPVALAISTPAPHACCMRKPMHDHGSGSRDIQAVDSQRHNCCPPVTTAHWAELGSGIDSSVHPLLSCLSPDLQPIRLTNQANVLRPVRGPPLS*
Ga0075424_1003036951	3300006904	Populus Rhizosphere	ACGLCLDDKFAGYEPAMHRLTARLLLVLTLVGTLVPVALALSAPVPHACCMRKPMHDYGSRSVEVQAVGGEHRNCCPPVTTGHWAQPGSGVRSDIHPLLAYLRPQPPHALRSRFENALRPVRGPPLS*
Ga0075436_1013977981	3300006914	Populus Rhizosphere	DYEPTMHHLTARLLLLLTLVGPVAPVAQAISAPLPHACCMRKPMHDHGSRSLEFRSTGSERRNCCPPVTTAHWAQPGLGAKSDTHPLLAHLAPQLNPPLLSNFENALRPVRGPPLT*
Ga0099793_104629822	3300007258	Vadose Zone Soil	MHRLTARLLLVLLLVGTFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNY
Ga0099829_1000006525	3300009038	Vadose Zone Soil	MHRLTARLLLVLLLVGTFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0099829_100373484	3300009038	Vadose Zone Soil	MHRLTARLLLVLTLVGTLAPVALAVSAPPPHACCMRKPLHDQGSRSLQTQTVDAGHHNCCPPVTTAQWAEAGSGINSKIHSLLAYLPPRSHTSLRGTFEDTLRPVRGPPLS*
Ga0099829_102894953	3300009038	Vadose Zone Soil	MLWTRSLPDYEPAMRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTTHWAELGSGVTSNIHPLLAYLPPQPHPALRSNYENPLRPVRGPPAN*
Ga0099829_117010931	3300009038	Vadose Zone Soil	MYRLTARLLLVLLFAGTFVPVALAISAPLPHACCLRKPMHDHGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS*
Ga0099830_101086282	3300009088	Vadose Zone Soil	MLWTRSLPDYEPAMRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTAHWAELGSGVTSNIHPLLAYLPPQPHPALRSNYENPLRPVRGPPAN*
Ga0099830_104416791	3300009088	Vadose Zone Soil	MRLYSKVTFVDLHPWPAVAYPLEEPAMHRLTARLLLVLTLVGTLAPVALAVSAPPLHACCMRKPLHDQGSRSLQTQTVDAGHHNCCPPVTTAQWAEAGSGINSKIHPLLAYLPPRSHTSLRGSFEDTLRPVRGPPLS*
Ga0099830_116336981	3300009088	Vadose Zone Soil	MYRLTARLLLVLLLAGTFVPVALAISAPVPHACCMRKPMHDQGSGNRGVQAVDGQNRNCCPPVTTAHWAELGSGIDSSIHALLACLSPDLQPIRLANQANALRPVRGPPLT*
Ga0099828_1000003747	3300009089	Vadose Zone Soil	MHRLTARLLLVLLLVGIFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0099828_102262261	3300009089	Vadose Zone Soil	MHRLTARLLLVLTLVGTLAPVALAVSAPPPHACCMRKPLHDQGSRSLQTQTVDAGHHNCCPPVTTAQWAEAGSGINSKIHPLLAYLPPRSHTSLRGSFEDTLRPVRGPPLS*
Ga0099827_100422261	3300009090	Vadose Zone Soil	MHRLTARLLLVLLLVGTFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSDIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0105247_118419802	3300009101	Switchgrass Rhizosphere	VSLMLVATEVMHRLTARLLLVFLLAGVFVPVGMAISVPLPHACCMRKAMHNHGSGVSEVQAVGGQDHNCCPPFATAHWAELGPGIDSGTNPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0105241_110315462	3300009174	Corn Rhizosphere	MHRLTARLMLVFLLAGIFVPLGMAISAPLPHACCVRKPMHDQGSGSREIEAVGGRHGNCCPPVTTAHWAELGAGIDSKAHPLLSFLAPASHPVLHSDYSNSLQPVRGPPLS*
Ga0105241_126892241	3300009174	Corn Rhizosphere	MYRLTARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTVEVRAVDGRNGNCCPPATTAHWAELESGIDSSVHLLLACLPPDLHSIQLTHQANALRPVRGPPLS*
Ga0105242_103043382	3300009176	Miscanthus Rhizosphere	MHRLTARLMLVFLLAGIFVPLGMAISAPLPHACCMRKPMHDQGSGSREIEAVGGRHGNCCPPITTAHWAELGAGIDSKAHPLLSFLAPASHPVLHSDYSNSLQPVRGPPLS*
Ga0134125_102340402	3300010371	Terrestrial Soil	MHRLTARLMLVFLLAGIFVPLGMAISAPLPHACCMRKPMHDQGSGSREIEAVGGRHGNCCPPVTTAHWAELGAGIDSKAHPLLSLLAPASHPVLHSDYSNSLQPVRGPPLS*
Ga0134125_122594571	3300010371	Terrestrial Soil	MLVATEVMHRLTARLLLVFLLAGVFVPVGMAISAPLPHACCMRKAMHDHGSGSHEIQAVGGRNGNCCPPVTTAHWAELGSGIDSTLRPLLSFLTPDSHPVLHSDYSNSLQPVRGPPLS*
Ga0134122_104949212	3300010400	Terrestrial Soil	MHRLTARLMLVFLLAGIFVPLGMAISAPLPHACCMRKPMHDQGSGSREIEAVGGRHGNCCPPVTTAHWAELGAGIDSKAHPLLSFLAPASHPVLHSDYSNSLQPVRGPPLS*
Ga0134123_112820372	3300010403	Terrestrial Soil	RETSGRHLRAGLASPMLGASSCDPAMYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0137391_107451242	3300011270	Vadose Zone Soil	MYRLTARLLLVLLLAGTFVPVARAISAPLPHACCLRKPMHDHGSGSREIQAVAGQNRNCCPPVATAHWADLGSGTNSSIHPLLASLPPDLYQVRPIHQPNALRPVRGPPLS*
Ga0137393_108954271	3300011271	Vadose Zone Soil	RLWPMLWTRSLPDYEPAMRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTTHWAELGSGVTSNIHPLLAYLPPQPHPALRRNYKNPLRPVRGPPAN*
Ga0137393_113493282	3300011271	Vadose Zone Soil	YRLTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMHAHGSGSREIQAVAGQNRNCCPPVTSAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS*
Ga0137463_12568641	3300011444	Soil	MYRLTARLLLVLLLAGTFVPLALAISAPAPHACCMRKGMHDHGSSREMQAVGGQYHNCCPPVTTAHWAELGSEIGSNIHPLLAHLSPDSRPVLHSHHANALRPVRGPPLS*
Ga0137389_106677372	3300012096	Vadose Zone Soil	MRLYSKVTFVDLHPWPAVAYPLEEPVMHRLTARLLLVLTLVGTLAPVALAVSAPPPHACCMRKPLHDQGSRSLQTQTVDAGHHNCCPPVTTAQWAEAGSGINSKIHPLLAYLPPRSHTSLRG
Ga0137388_103643982	3300012189	Vadose Zone Soil	MHRLTARLLLVLTLVGTLAPVALAVSAPPPHACCMRKPLHDQGSRSLQTQTVDAGHHNCCPPVTTAQWAEAGSGINSKIHPLLAYLPPRSHTSLRGTFEDTLRPVRGPPLS*
Ga0137399_100650225	3300012203	Vadose Zone Soil	MHRLTARLLLVMLLVGTFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0137390_101015101	3300012363	Vadose Zone Soil	MLWTRSLPDYEPAMRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTTHWAELGSGVTSNIHPLLAYLPPQPHPALRSNYENPLRPVRGPP
Ga0137390_103010041	3300012363	Vadose Zone Soil	MYRLTARLLLVLLFAGTFVPVALAISAPLPHACCLRKPMHDHGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPHALRPVRAPPLS*
Ga0157302_102763152	3300012915	Soil	YRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHNHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0137395_100822054	3300012917	Vadose Zone Soil	MYRLTARLLLVLLLASTLVPAALAISTLAPHACCIRKPMHQHGSGSRDIQAVDSQHHNCCPPVTTAHWAEPGSGIDSSIHALLACLSPDLLPIRLA
Ga0137404_100324155	3300012929	Vadose Zone Soil	MHRLTARFLLVMLLVGTFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0137404_102483172	3300012929	Vadose Zone Soil	MYRLTARLLLGLLLASTLVPVALAISVPAPHACCMRKPMHQHGSGSRDIQAVDSQHHNCCPPVTTAHWAELGSGIDSSVHPLLACLSPDLQPIRLTNQANALRPVRGPPLS*
Ga0137404_108722311	3300012929	Vadose Zone Soil	GTLPDYEPAMHRLTARLLLVLTLVGTLAPVALAISAPVPHACCIRKPMHDHGSRSLEFRSTGSERRNCCPPVTTAHWAQPGLGTKSDTHPLLAYLAPQPNPPLLSNFENALRPVRGPPLT
Ga0137407_102383391	3300012930	Vadose Zone Soil	MIVFLPDFAEHLPEYEPAMHRLTARLLLILTLVGTLAPVALAISAPLPHACCIRKPMHDHGSRSLEFRSTGSERRNCCPPVTTAHWAQPGLGTKSDTHPLLAYLGLQPNPPLLSNFENALRPVRGPPLT*
Ga0164302_113537881	3300012961	Soil	MLVTGSCDPTMYRLTARLLLVFLLSGIFVPVGVAISAPLPHACCMRKAMHDHGSGVSEVQAVGGQNHNCCPPFATAHWAELGPGIDPGTHPLLAYLSPDAHPALRSNLVHSLRPVRGPPLSSDLL*
Ga0164309_114057122	3300012984	Soil	VMYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS*
Ga0137403_100422805	3300015264	Vadose Zone Soil	MLLVGTFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS*
Ga0137403_107682191	3300015264	Vadose Zone Soil	GTLPDYEPAMHRLTARLLLVLTLVGTLAPVALAISAPVPHACCIRKPMHDHGSRSLEFRSTGSERRNCCPPVTTAHWAQPGLGTKSDTHPLLAYLAPQPNSPLLSNFENALRPVRGPPLT
Ga0187824_101029532	3300017927	Freshwater Sediment	MHRLTARLLLVLLLVGTFAPVALAISAPLPHACCMRKPMHEHGSRSLAAQAADEGHHNCCSPVTTAHWAELESGVHSTVRPPLAFLPPDSHPRLRSNYDAALQPVRGPPLS
Ga0187825_100496242	3300017930	Freshwater Sediment	MYRLTARLLLVLLLASTFVPVAMAMSGPVPHACCMRKPMHDHGSGSREIGEVVGRTGNCCPPVTTAHWAELGSEIESNTHPLLAYLLPDAHPSLHSDHAVSLRPVRGPPLS
Ga0187821_100617112	3300017936	Freshwater Sediment	VMYRLTARLLLVLLLASTFVPVAMAMSGPVPHACCMRKPMHDHGSGSREIGEVAGRTGNCCPPVTTAHWAELGSEIESNTHPLLAYLLPDAHPSLHSDHAVSLRPVRGPPLS
Ga0187821_100847112	3300017936	Freshwater Sediment	MHRLTARLLLVLLLVGTFAPVALAISAPLPHACCMRKPMHEHGSRSLAAQAADEGHHNCCPPVTTAHWAELESGVHSTVRPPLAFLPPDSHPRLRSNYDAALQPVRGPPLS
Ga0187785_100593312	3300017947	Tropical Peatland	MHRLTARLLLVLVLVGTLAPVALAVSAPAPHACCMRKAMHDHTSRSLEIQSVGGEHRNCCPPVTTAHWAELGSSTNSSIQPLLAYLPAQPQPVLRSNYENALRPVRGPPLG
Ga0187822_100076573	3300017994	Freshwater Sediment	MYRLTARLLLVLLLASTFVPVAMAMSGPVPHACCMRKPMHDHGSGSREIGEVAGRTGNCCPPVTTAHWAELGSEIESNTHPLLAYLLPDAHPSLHSDHAVSLRPVRGPPLS
Ga0210407_107501952	3300020579	Soil	LALRPLCLWREARKSRAPKPVMYRQTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMQDHGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS
Ga0210399_101460882	3300020581	Soil	MHRLTARLLLVLLLVGTFAPVALAISAPLPHACCMRKPMHDHGSRSLEIQNVGSDHQNCCPPVTTAHWAEAGSGVHSNLHPPLAYLAPDSRPIFRGSYTNTLRPVRGPPAS
Ga0210399_102378282	3300020581	Soil	MYRQTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMQDHGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS
Ga0210401_102519812	3300020583	Soil	MYRLTAKLLLVLLLAGTFAPVALSISAPLPHACCLRKPMHDLGSGSREIQAVAGQNRNCCPPVTTAHWADLGTGANSSIHPLLASLASDLYQVRLIHQPNALLPVRGPPLF
Ga0210404_106368171	3300021088	Soil	ARKSRAPEPVMYRLTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMHDHGSGSREIQAVAGQNRNCCPPVTTAHWVDLGSGTNSGIHPLLASLPPDLYQVRPTHQPNALRPVRGPPF
Ga0210408_103487862	3300021178	Soil	MYRLTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMHDHGSGSREIQAVAGQNRNCCPPVTTAHWVDLGSGTNSGIHPLLASLPPDLYQVRPTHQPNALRPVRGPPFS
Ga0210396_102893692	3300021180	Soil	MHRLTARLLLVLLLVGTFAPVALAISAPLPHACCMRKPMHDHGSRSLEIQNVGSDHQNCCPPVTTTHWAEAGSGVHSNLHPPLAYLPPDSRPALRGSYENTLRPVRGPPAS
Ga0210394_101124312	3300021420	Soil	MHRLTARLLLVLLLVGTFAPVALAISAPLPHACCMRKPMHDHGSRSLEIQNVGSDHQNCCPPVTTAHWAEAGSGVHSNLHPPLAYLPPDSRPALRGSYENTLRPVRGPPAS
Ga0210384_103986812	3300021432	Soil	SSAPKPVMYRQTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMQDHGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS
Ga0210384_109888482	3300021432	Soil	MYRLTAKLLLVLLLAGTFAPVALSISAPLPHACCLRKPMHDLGSGSHEIQAVAGQNRNCCPPVTTAHWADLGTGANSSIHPLLASLASDLYQVRLIHQPNALLPVRGPPLF
Ga0210384_115432421	3300021432	Soil	KGQWRPYSKVTFPDLHPRPAVAYPLVELVMHRLTARLLLVLTLVGTLAPVALAVSVPPPHACCMRKPLHEHSSRGVHTQTVDTGHSNCCPPVTTAQWAELGSGINSNIHPALAYLPPQLYPALRTNFENLLRPVRGPPTT
Ga0210402_103798641	3300021478	Soil	RAPKPVMYRQTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMQDHGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS
Ga0210410_108094031	3300021479	Soil	MHRLTARLLLVLLLVGTFAPVALAISAPLPHACCMRKPMHDHGSRSLEIQNVGSDHQNCCPPVTTAHWAEAGSGVHSNLHPPLAYLPPDSRPALRRSYENTLRPVRGPP
Ga0242662_102839981	3300022533	Soil	RKSRAPKPVMYRLTAKLLLVLLLAGTFAPVALSISAPLPHACCLRKPMQDHGSGSREIQAVAGQNRNCCPPVTTAHWADLGSGTNSSIHPLLASLPPDLYQVRPTHQPNALRPVRGPPLS
Ga0247669_10422241	3300024182	Soil	MLVATEVMHRLTARLLLVFLLAGVFVPVGMAISAPLPHACCMRKAMHDHGSGSHEIQAVGGRNGNCCPPVTTAHWAELGSGIDSTLRPLLSFLTPDSHPVLHSDYSNSLQPVRGPPLS
Ga0207642_108093011	3300025899	Miscanthus Rhizosphere	ITDYWRHLRAGLVSPILVTGSCRLTMHRLTARLMLVFLLAGIFVPLGMAISAPLPHACCVRKPMHDQGSGSREIEAVGGRHGNCCPPVTTAHWAELGAGIDSKAHPLLSFLAPASHPVLHSDYSNSLQPVRGPPLS
Ga0207710_102170192	3300025900	Switchgrass Rhizosphere	PVMYRLTARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTVEVRAVDGRNGNCCPPATTAHWAELESGIDSSVHLLLACLPPDLHSIRLTHQANALRPVRGPPLS
Ga0207710_105172681	3300025900	Switchgrass Rhizosphere	AGVFVPVGMAISVPLPHACCMRKAMHNHGSGVSEVQAVGGQDHNCCPPFATAHWAELGPGIDSGTNPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS
Ga0207647_100790412	3300025904	Corn Rhizosphere	MYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS
Ga0207707_104495542	3300025912	Corn Rhizosphere	MLVTGSCDPTMYRLTARLLLVFLLSGIFVPVGLAISAPLPHACCVRETAYHHGSGVSEVQAVGGQNRNCCPPIATAHWADLGPGIDSGTHPLLAYLSPDMHPALRGNFVHALRPGRGPPL
Ga0207649_100777214	3300025920	Corn Rhizosphere	MLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS
Ga0207659_104908732	3300025926	Miscanthus Rhizosphere	LRAGLASPMLGASSCDPAMYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS
Ga0207687_104060432	3300025927	Miscanthus Rhizosphere	SFGGERFGSVPVMYRLTARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTVEVRAVDGRNGNCCPPATTAHWAELESGIDSSVHLLLACLPPDLHSIRLTHQANALRPVRGPPLS
Ga0207703_106867211	3300026035	Switchgrass Rhizosphere	MYRLTARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTVEVRAVDGRNGNCCPPATTAHWAELESGIDSSVHLLLACLPPDLHSIRLTHQANALRPVRGPPLS
Ga0179593_12239165	3300026555	Vadose Zone Soil	MHRLTARFLLVLMLVGTIAPVALAISAPAPHACCLRKPAHHHGSSDLEVHAASCDNHSCCSPVTTAHWAELESGMNPNLHPPLVNLPPDAHPVLRSCLGSALRPVRGPPAS
Ga0179587_100263732	3300026557	Vadose Zone Soil	MHRLTARFLLVLMLVGTIAPVALAISAPAPHACCLRKPAHHHGSSDLEVHAASCDSHSCCSPVTTAHWAELESGMNPNLHPPLVNLPPDAHPVLRSCLGSALRPVRGPPAS
Ga0208989_101695092	3300027738	Forest Soil	RLPEPVMYRLTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMHDHGSGSREIKAVAGQNRNCCPPVTTAHWADLGWGTNSSIHPLLASLPPDLYQVRLSHQPNALRPVRGPPLS
Ga0209180_101180691	3300027846	Vadose Zone Soil	MHRLTARLLLVLTLVGTLAPVALAVSAPPPHACCMRKPLHDQGSRSLQTQTVDAGHHNCCPPVTTAQWAEAGSGINSKIHSLLAYLPPRSHTSLRGTFEDTLRPVRGPPLS
Ga0209180_102531432	3300027846	Vadose Zone Soil	RLWPMLWTRSLPDYEPAMRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTTHWAELGSGVTSNIHPLLAYLPPQPHPALRSNYENPLRPVRGPPAN
Ga0209701_1000033117	3300027862	Vadose Zone Soil	MHRLTARLLLVLLLVGTFAPVALAISAPVPHACCMRKPLHDQGSRRVETLTVGREHHNCCPPVTTAHWAELGSRVDSNIHSLLTYLPPPSHPGGCSNYENALRPVRGPPAS
Ga0209701_100897642	3300027862	Vadose Zone Soil	MRRLTARLLLVLLLVGTLAPVALAISAPLPHACCMRKPMHDHGSRSLEVQAVAGEHRNCCPPVTTAHWAELGSGVTSNIHPLLAYLPPQPHPALRSNYENPLRPVRGPPAN
Ga0209579_104250652	3300027869	Surface Soil	LLLVLLLAGTFVPAALAVAAPLPHACCMRKPMHDHGSATREIQATTSRNGNCCPPVTTAHWAELGAGIDTSVHPLLTSLSTDLHSVRLINQANTLRPVRGPPLS
Ga0209068_100001668	3300027894	Watersheds	MHRLTARLLLVLTLVGSLAPVALAVSAPPPHACCMRKPMHDRRSRSFQTQTVDTGHHNCCPPVTTAHWAEPGSGINSNVHPALAYLPRLANTALRNFFENALRPVRGPPLG
Ga0209488_103792472	3300027903	Vadose Zone Soil	MYRLTARLLLVLLLASTLVPAALAISTLAPHACCIRKPMHQHGSGSRDIQAVDSQHHNCCPPVTTAHWAELGSGIDSSVHPLLACLSPDLQPIRLTNQANALRPVRGPPLS
Ga0307312_102883482	3300028828	Soil	MHRLTARLLLVLTLVGTLAPVALAIFAPLPHACCIRKPVHDHGSRSLEFRSTGSERRNCCPPVTTAHWAQPGLGTKSDTHPLLAYLAPQPNPPLLSNFENALRPVRGPPLT
Ga0307312_105741151	3300028828	Soil	MIVFLPDFADHLPEYEPAMHRLTARLLLILTLVGTLAPVALAISAPLPHACCIRKPMHDHGSRSLEFRSTGSERRNCCPPVTTAHWAQPGLGTKSDTHPLLAYLAPQ
Ga0222749_105092811	3300029636	Soil	MYRLTARLLLLLLLASALVPAALAITTPAPHACCIRKPMRQHGSGSRDIQAVDSQHHNCCPPVTTAHWAELGSGIGPSIHALLACLSPDLQPIRLANQANALRPVRGPPLS
Ga0310813_100712091	3300031716	Soil	CDPAMYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTNPLLAYLAPDSHPTLRSNLIHALRPVRGPPLS
Ga0307469_100127365	3300031720	Hardwood Forest Soil	MYRLTARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTLEVRAVDSRNGNCCPPATTAHWAELESGIDSSVQLLLACLPPDLHSIRLTHQANALRPVRGPPLS
Ga0307468_1018497621	3300031740	Hardwood Forest Soil	MYRLTARLLLVFLLSGIFVPVGVAISAPLPHACCMRKAMHDHGSGVSEVQAVGGQNHNCCPPFATAHWAELGPGIDPGTHPLLAYLSPDAHPALRSNFVHSL
Ga0307479_101499732	3300031962	Hardwood Forest Soil	MYRLTARLLLVLLLAGTFVPVALAISAPLPHACCLRKPMHDHGSGSREIQAVAGQNGNCCPPVTTAHWADLGSGTNSSIHPLLASLPLDLYQVRPTHQPNALRPVRGPPLS
Ga0307471_1000719832	3300032180	Hardwood Forest Soil	MWYDTTPHQPCTGAACGLCLDDKFAGYEPAMHRLTARLLLVLTLVGTLAPVALALSAPVPHACCMRKPMHDYGSRSVEVQAVGGEHRNCCPPVTTGHWAQPGSGVRSDIHPLLAYLRPEPPHALRSRFENALRPVRGPPLS
Ga0307471_1000929041	3300032180	Hardwood Forest Soil	ARLLLVLLLAGTFVPVAMAISAPLPHTCCLRKPMHDHGSGTLEVRAVDSRNGNCCPPATTAHWAELESGIDSSVHLLLACLPPDLHSIRLTHQANALRPVRGPPLS
Ga0307471_1016584791	3300032180	Hardwood Forest Soil	YSKVTFPDLHPRPAVAYPLEELVMHRLTARLLLVLTLVGTLAPVALAVSVPPPHACCMRKPLHEHDSRGVQTQTVDTGHSNCCPPVTTAQWAELGSGINSNIHPALAYLPPQLHPALRTSFENLLRPVRGPPTT
Ga0307472_1003442532	3300032205	Hardwood Forest Soil	MHRLTARLLLVLTLVGTLAPVALAVSVPPPHACCMRKPLHEHGSRGVQTQTVDTGHSNCCPPVTTAQWAELGSGINSNIHPALAYLPPQLHPALRTSFENLLRPVRGPPTT
Ga0335069_102750672	3300032893	Soil	MYRLTARLLLVLLLASTFVPVAMAVSAPVPHACCMRKPMHRHGPGGRELRAVDTRNGSCCPPVTTAHWAELGSGIDSSVQPLLACLSPDLQPIGLTSQANALRPVRGPPLS
Ga0310810_114742731	3300033412	Soil	PAMYRLTARLMLVFLLAGVFVPVGMAISVPLPHACCMRKAMHDHGSGVSEVQAVGGRDHNCCPPFATAHWAELGPGIDSGTDPLLAYLAPDSHPTLRSNLIHVLRPVRGPPLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072694

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences