Metagenome / Metatranscriptome Family F072680

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072680
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	52 residues
Representative Sequence	LTQSGKLTKAKGWNPLPNASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV
Number of Associated Samples	95
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.61 %
% of genes near scaffold ends (potentially truncated)	92.56 %
% of genes from short scaffolds (< 2000 bps)	87.60 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.562 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.008 % of family members)
Environment Ontology (ENVO)	Unclassified (36.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.678 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.93% Coil/Unstructured: 74.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00106	adh_short	5.79
PF01292	Ni_hydr_CYTB	1.65
PF13442	Cytochrome_CBB3	1.65
PF01872	RibD_C	1.65
PF00484	Pro_CA	1.65
PF00144	Beta-lactamase	1.65
PF08327	AHSA1	1.65
PF13302	Acetyltransf_3	1.65
PF13620	CarboxypepD_reg	1.65
PF14137	DUF4304	0.83
PF07366	SnoaL	0.83
PF09699	Paired_CXXCH_1	0.83
PF00076	RRM_1	0.83
PF01479	S4	0.83
PF00158	Sigma54_activat	0.83
PF10130	PIN_2	0.83
PF01757	Acyl_transf_3	0.83
PF13520	AA_permease_2	0.83
PF13936	HTH_38	0.83
PF11376	DUF3179	0.83
PF12704	MacB_PCD	0.83
PF01839	FG-GAP	0.83
PF13502	AsmA_2	0.83
PF02687	FtsX	0.83
PF12893	Lumazine_bd_2	0.83
PF01068	DNA_ligase_A_M	0.83
PF04185	Phosphoesterase	0.83
PF00107	ADH_zinc_N	0.83
PF00072	Response_reg	0.83
PF07617	DUF1579	0.83
PF04365	BrnT_toxin	0.83
PF13418	Kelch_4	0.83
PF13561	adh_short_C2	0.83
PF08028	Acyl-CoA_dh_2	0.83
PF03795	YCII	0.83
PF14464	Prok-JAB	0.83
PF13211	DUF4019	0.83
PF14384	BrnA_antitoxin	0.83
PF13493	DUF4118	0.83
PF00903	Glyoxalase	0.83
PF03050	DDE_Tnp_IS66	0.83
PF00027	cNMP_binding	0.83
PF00011	HSP20	0.83
PF03544	TonB_C	0.83
PF02371	Transposase_20	0.83
PF07238	PilZ	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.65
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	1.65
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	1.65
COG3038	Cytochrome b561	Energy production and conversion [C]	1.65
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	1.65
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.65
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	1.65
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.65
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.65
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.65
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.65
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.83
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.83
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.83
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.83
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.56 %
Unclassified	root	N/A	7.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.56 %
Unclassified	root	N/A	7.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.56 %
Unclassified	root	N/A	7.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.60 %
Unclassified	root	N/A	7.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.72 %
Unclassified	root	N/A	7.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.72 %
Unclassified	root	N/A	7.44 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.72 %
Unclassified	root	N/A	7.44 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.72 %
Unclassified	root	N/A	7.44 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001174\|JGI12679J13547_1006162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300002245\|JGIcombinedJ26739_100192683	All Organisms → cellular organisms → Bacteria → Acidobacteria	1928	Open in IMG/M
3300002245\|JGIcombinedJ26739_100434377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300004104\|Ga0058891_1459680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300004633\|Ga0066395_10226326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300005435\|Ga0070714_100106857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2473	Open in IMG/M
3300005557\|Ga0066704_10025418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3552	Open in IMG/M
3300005586\|Ga0066691_10011680	All Organisms → cellular organisms → Bacteria	4116	Open in IMG/M
3300005764\|Ga0066903_102776059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300005764\|Ga0066903_105714877	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300005844\|Ga0068862_101460227	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300006050\|Ga0075028_100660818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300006173\|Ga0070716_100268703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1171	Open in IMG/M
3300006173\|Ga0070716_100328745	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300006800\|Ga0066660_10040098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2970	Open in IMG/M
3300006806\|Ga0079220_10178367	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300006904\|Ga0075424_101953277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300007258\|Ga0099793_10234101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300007258\|Ga0099793_10519885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300007265\|Ga0099794_10123319	All Organisms → cellular organisms → Bacteria → Acidobacteria	1305	Open in IMG/M
3300009137\|Ga0066709_103411602	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300009143\|Ga0099792_10085605	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300009143\|Ga0099792_10914170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300010048\|Ga0126373_10102226	All Organisms → cellular organisms → Bacteria → Acidobacteria	2653	Open in IMG/M
3300010048\|Ga0126373_11576356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300010048\|Ga0126373_11871976	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010048\|Ga0126373_11990117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300010048\|Ga0126373_13139686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300010159\|Ga0099796_10022233	All Organisms → cellular organisms → Bacteria → Acidobacteria	1965	Open in IMG/M
3300010358\|Ga0126370_10001326	All Organisms → cellular organisms → Bacteria	11254	Open in IMG/M
3300010361\|Ga0126378_10360725	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300010361\|Ga0126378_11967195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300010366\|Ga0126379_10590852	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300010376\|Ga0126381_101951830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300010398\|Ga0126383_12485299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300010858\|Ga0126345_1153024	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300011120\|Ga0150983_11766028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1488	Open in IMG/M
3300011120\|Ga0150983_13955997	Not Available	605	Open in IMG/M
3300011269\|Ga0137392_10613453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300011269\|Ga0137392_11638094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012205\|Ga0137362_10416323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300012205\|Ga0137362_11247069	Not Available	628	Open in IMG/M
3300012205\|Ga0137362_11436118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300012207\|Ga0137381_11523181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012209\|Ga0137379_10416081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1253	Open in IMG/M
3300012351\|Ga0137386_10126127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1822	Open in IMG/M
3300012363\|Ga0137390_11309791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012917\|Ga0137395_10983568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300012925\|Ga0137419_10232001	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300012929\|Ga0137404_11102493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300012971\|Ga0126369_10641294	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300012971\|Ga0126369_12295083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300013296\|Ga0157374_11361397	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300016294\|Ga0182041_11432107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300016357\|Ga0182032_10647420	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300016422\|Ga0182039_10719540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300016445\|Ga0182038_11952044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300017823\|Ga0187818_10234142	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300017927\|Ga0187824_10339634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300017943\|Ga0187819_10054783	All Organisms → cellular organisms → Bacteria → Acidobacteria	2367	Open in IMG/M
3300017973\|Ga0187780_10157993	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300017995\|Ga0187816_10563585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300018012\|Ga0187810_10220311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300020140\|Ga0179590_1115872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300020579\|Ga0210407_10273140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1318	Open in IMG/M
3300021088\|Ga0210404_10434340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300021170\|Ga0210400_10320892	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300021170\|Ga0210400_10321872	Not Available	1271	Open in IMG/M
3300021181\|Ga0210388_11339150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300021401\|Ga0210393_10376653	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300021401\|Ga0210393_10881770	Not Available	727	Open in IMG/M
3300021432\|Ga0210384_10768012	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300021433\|Ga0210391_10989486	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300021477\|Ga0210398_11077749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300021479\|Ga0210410_10563729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300021559\|Ga0210409_10071919	All Organisms → cellular organisms → Bacteria → Acidobacteria	3216	Open in IMG/M
3300021559\|Ga0210409_11591704	Not Available	529	Open in IMG/M
3300021560\|Ga0126371_10033723	All Organisms → cellular organisms → Bacteria	4814	Open in IMG/M
3300022507\|Ga0222729_1052295	Not Available	568	Open in IMG/M
3300022509\|Ga0242649_1059683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300022531\|Ga0242660_1065536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300022531\|Ga0242660_1194100	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300022717\|Ga0242661_1013589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300022717\|Ga0242661_1067864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300022722\|Ga0242657_1027124	Not Available	1130	Open in IMG/M
3300022722\|Ga0242657_1085993	Not Available	754	Open in IMG/M
3300025544\|Ga0208078_1090604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300025918\|Ga0207662_10833646	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300025939\|Ga0207665_10278557	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300026333\|Ga0209158_1099682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300026542\|Ga0209805_1039106	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2403	Open in IMG/M
3300026557\|Ga0179587_10134358	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300027583\|Ga0209527_1092326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300027603\|Ga0209331_1010426	All Organisms → cellular organisms → Bacteria → Acidobacteria	2438	Open in IMG/M
3300027605\|Ga0209329_1072398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300027635\|Ga0209625_1000759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	8095	Open in IMG/M
3300027765\|Ga0209073_10230460	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300027842\|Ga0209580_10460250	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300027889\|Ga0209380_10212872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1135	Open in IMG/M
3300027903\|Ga0209488_11216583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300028536\|Ga0137415_11470941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300031231\|Ga0170824_115815823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300031715\|Ga0307476_10022392	All Organisms → cellular organisms → Bacteria → Acidobacteria	4118	Open in IMG/M
3300031718\|Ga0307474_10652685	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300031719\|Ga0306917_10764106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300031744\|Ga0306918_10775507	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300031753\|Ga0307477_10377424	Not Available	973	Open in IMG/M
3300031753\|Ga0307477_10460356	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031753\|Ga0307477_11146663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300031777\|Ga0318543_10487982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300031823\|Ga0307478_10030436	All Organisms → cellular organisms → Bacteria	3888	Open in IMG/M
3300031890\|Ga0306925_11226190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300031962\|Ga0307479_10054547	All Organisms → cellular organisms → Bacteria	3847	Open in IMG/M
3300031962\|Ga0307479_10378040	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300031962\|Ga0307479_11555922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300032076\|Ga0306924_12182515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300032261\|Ga0306920_102234378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300032261\|Ga0306920_104195053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300033158\|Ga0335077_12173460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300033289\|Ga0310914_11527038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300033806\|Ga0314865_072091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.52%
Host-Associated	Host-Associated	2.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.56%
Aquatic	Environmental → Aquatic	4.96%
Plants	Host-Associated → Plants	2.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.56%
Freshwater	Environmental → Aquatic → Freshwater	4.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.65%
Sediment	Environmental → Aquatic → Sediment	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.38%
Loam	Environmental → Terrestrial → Soil → Loam	15.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12679J13547_10061621	3300001174	Forest Soil	TKVKGWNAFPDASAKDGSTYRALFCDSCAKNYKDGNVRMAKEAVLV*
JGIcombinedJ26739_1001926832	3300002245	Forest Soil	TGKLTKAKGWNPVQNASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV*
JGIcombinedJ26739_1004343771	3300002245	Forest Soil	QSGKLTKTNGWNPFPDASAKDGTTYRALFCDSCEKNYNNGNVRMAKEPVLV*
Ga0058891_14596802	3300004104	Forest Soil	QSGKLTKARGWNPLPNASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV*
Ga0066395_102263262	3300004633	Tropical Forest Soil	MLATKIEHWNPFQKTTAKDVTTYRALFCDSCAKNDNDGHARMAKEPVLA*
Ga0070714_1001068571	3300005435	Agricultural Soil	GKLTNAKGWNLVPDASAKDGSTFKSLFCDNCAKNYSHGHIRMAKEPVLV*
Ga0066704_100254181	3300005557	Soil	LPNASAKDGTTYRALFCDSCGKNYNSGHVRMAKEPVLV*
Ga0066691_100116807	3300005586	Soil	LPNASAKDGTTYRALFCDSCGKNYTSGHVRMAKEPVLV*
Ga0066903_1027760591	3300005764	Tropical Forest Soil	GMEYICEHLFQALIQAGKLTKAKGWNLFQDASAKDGTKYRALFCDSCAKNYNNGNVRMAKEPVLV*
Ga0066903_1057148772	3300005764	Tropical Forest Soil	ADGMDYICEHLFQALTQIGKLTKAEGWNPFQNATAKDGTTYHALFCDSCAKNYNDGHVRMAKEPVLA*
Ga0068862_1014602272	3300005844	Switchgrass Rhizosphere	EHLFQGLTQAGKLTKAKGWNPLQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV*
Ga0075028_1006608182	3300006050	Watersheds	DYICQHLFQGLTQTGKLTNAKGWNPVEDASAKDGTTYRALFCDSCAKNHSNGNVRMAKEPVLV*
Ga0070716_1002687032	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LTQAGKLTKVKGWNPFGAASAKDGAPYCALLCDSCAKNYNDNNVRTAKEPVLV*
Ga0070716_1003287453	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	KLTKARGWNPLLDAAAKDGTTYRALFCDSCAKNYNNGNVRMAKEPVLV*
Ga0066660_100400981	3300006800	Soil	LFQALTQTGKLTKVKGWNPLQNASTKDGTTYRALFCDSCAKNYNNGHVRMAKEPVLV*
Ga0079220_101783672	3300006806	Agricultural Soil	LFQASTQTGKLTKIEGWNPFQNATAKDGTAYRALFCDSCAKNYNDGHVRMAKEPVLA*
Ga0075424_1019532771	3300006904	Populus Rhizosphere	MEYICEHLFQALTQAGKLTKAKGWNPFQNASAKDGTTYRALFCDSCAKNYNNANVRTAKEPVLV*
Ga0099793_102341011	3300007258	Vadose Zone Soil	SGKLTKLKGWNPTPDASAKDGATYRALFCDSCAKNHNNGNVRMAKEPVLV*
Ga0099793_105198851	3300007258	Vadose Zone Soil	KLTKAKGWNPLPNATAKDGTTYRALFCDSCGKNYNNGNVRMAKDPVLV*
Ga0099794_101233191	3300007265	Vadose Zone Soil	PFDTASSKDGSTYRALFCDSCAKNHNNGNIRMAKEPVLV*
Ga0066709_1034116022	3300009137	Grasslands Soil	NSLQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV*
Ga0099792_100856052	3300009143	Vadose Zone Soil	FDTASTKEGNSYRALFCDTCAKNYKDGNVRMAKEPVLV*
Ga0099792_109141702	3300009143	Vadose Zone Soil	SGKLTKVNGWNPFDTASSKDGSTYRALFCDSCAKNHNNGNIRMAKEPVLV*
Ga0126373_101022263	3300010048	Tropical Forest Soil	FQALTQTGKLTQVEGWNLFQNATAKDGTTYRALFCDSCAKNYNDGHVRMAKEPVLA*
Ga0126373_115763561	3300010048	Tropical Forest Soil	HAGKLTKGNGCNPFPNAIAKDGTTYRALLCDSCAKNYSKGNLRTAKEAVLA*
Ga0126373_118719762	3300010048	Tropical Forest Soil	NPFQNATAKDGTTYRALFCDSCAKNYNDGHVRMAKEPVLA*
Ga0126373_119901171	3300010048	Tropical Forest Soil	KEKGWNIFEDASAKDGTSYRALFCDSCGKNYNNGNIRMAKEPVLV*
Ga0126373_131396862	3300010048	Tropical Forest Soil	DYICQHLFQALTQTGKLTKEKGWNALENASAKDGTCYRALFCDSCGKNYNNGNVRMAKEPVLV*
Ga0099796_100222331	3300010159	Vadose Zone Soil	GLTQSGKLTNAKGWNPFDSANTKEGNSYRALFCDTCAKNYKDGNVRMAKEPVLV*
Ga0126370_1000132617	3300010358	Tropical Forest Soil	MLATKIEHWNPFQKTTAKDVTTYQALFCDSCAKNDNDGHVRMAKEPVLA*
Ga0126378_103607251	3300010361	Tropical Forest Soil	QEATPTGKLTKIKGGNPFQNATAKDGTTYRALFCDSCAKNYNDGHVRMAREPVLA*
Ga0126378_119671951	3300010361	Tropical Forest Soil	MDYICEHLFQALTQTGKLAKGEGWNPFQNASAKDGTTYRALFCDSCAKNYNDGHVRMAKEPVLA*
Ga0126379_105908522	3300010366	Tropical Forest Soil	GKLTKVKGWNPFESASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV*
Ga0126381_1019518301	3300010376	Tropical Forest Soil	EYICEHLFQALTQAGKLTKVNGWNPVPNATAKDGTGYRALFCDSCEKNYSKGNLRTAKEAVLV*
Ga0126383_124852992	3300010398	Tropical Forest Soil	RDADGMDYVCEHLFQEATPTGKLTKIKGWNPFQNATAKDGTTYRALFCDSCAKNYNDGHVRMAREPVLA*
Ga0126345_11530241	3300010858	Boreal Forest Soil	PLPDATAKDGSAYRALFCDACEKNYNNGNVRMAKEPVLV*
Ga0150983_117660282	3300011120	Forest Soil	QRREKGRGGCMDYICEHLFQALSQTGKLTKAKGWNPLPNASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV*
Ga0150983_139559971	3300011120	Forest Soil	EKGWNPVPNASSKDGANYRALFCDSCGKNYTHGHVRMAKEPVLV*
Ga0137392_106134531	3300011269	Vadose Zone Soil	AGKLTKAKGWNPLPNAGAKDGTTYRALFCDSCAKNHNNGNVRMAKEPVLV*
Ga0137392_116380941	3300011269	Vadose Zone Soil	YICEHLFQALTHGGKLTKAKGWNPLQNASAKDGTTYRALFCDSCSKNYNNGNVRMAKEPILV*
Ga0137362_104163232	3300012205	Vadose Zone Soil	SSKDGSTYRALFCDSCAKNHNNGNIRLAKEPVLV*
Ga0137362_112470692	3300012205	Vadose Zone Soil	QGLTQSGKLTNAKGWNPFDSASTKEGNAYRALFCDSCAKNYKDGNVRMAKEPVLV*
Ga0137362_114361181	3300012205	Vadose Zone Soil	DGMDYICEHLFQALTQSGKLTKAKGWNPLPNATAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV*
Ga0137381_115231811	3300012207	Vadose Zone Soil	EYICEHLFQALTQSGKLTKVKGWNPFENASTKDGATYRALFCDSCGKNYNNGNVRMAKEPVLV*
Ga0137379_104160813	3300012209	Vadose Zone Soil	VKGWNPLPNASAKDGTTYRALFCDSCGKNYNSGHVRMAKEPVLV*
Ga0137386_101261272	3300012351	Vadose Zone Soil	LTQSGKLTKVKGWNPFENASTKDGATYRALFCDSCGKNYNNGNVRMAKEPVLV*
Ga0137390_113097911	3300012363	Vadose Zone Soil	LTKGKGWNPLQNASSKDGTTYRALCCDSCGKNYNNGNVRMAKEPVLV*
Ga0137395_109835682	3300012917	Vadose Zone Soil	LFQGLTQSGKLTNAKGWNPFDSASTKEGNTYRALFCDTCAKNYKDGNVRMAKEPVLV*
Ga0137419_102320011	3300012925	Vadose Zone Soil	HLFQGLTQSGKLTNAKGWNPFDSASTREGNTYRALFCDTCAKNYKDGNVRMAKEPVLV*
Ga0137404_111024931	3300012929	Vadose Zone Soil	NPLQNASAKDGTTYRALFCDSCEKNYNNGNVRLAKEPVLV*
Ga0126369_106412941	3300012971	Tropical Forest Soil	EMEYICEHLFQALTRAGKLTKVNGWNPLPNATAKDGTTYRALFCDSCAKNYNKGNLRTAKEAVLV*
Ga0126369_122950832	3300012971	Tropical Forest Soil	GMDYVCEHLFQEATPTGKLTKIKGWNPFQNATAKDGTTYRALFCDSCAKNYNDGHVRMAREPVLA*
Ga0157374_113613972	3300013296	Miscanthus Rhizosphere	AKGWNPLQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV*
Ga0182041_114321071	3300016294	Soil	TKEKGWNIFEDASAKDGTSYRALFCDSCGKNYNNGNIRMAKEPVLV
Ga0182032_106474203	3300016357	Soil	LFQALTQSGKVTKDKGWNAFEDASAKDGSTYRALFCDSCGKNYKDGNVRMAKEPVLV
Ga0182039_107195401	3300016422	Soil	MAYICEHLFQALTQAGKLTKVNGWNPAPNATAKDGTTYPALLCDSCAKNHSKGNLRTAKE
Ga0182038_119520441	3300016445	Soil	TQAGKLTKVNGWNPAPNATAKDGTTYPALFCDSCAKNYSKGNLRTAKEAVLV
Ga0187818_102341421	3300017823	Freshwater Sediment	YICEHLFQALTQSGKLTKVNGWNPLQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV
Ga0187824_103396342	3300017927	Freshwater Sediment	GMQAGKLTKAKGWNPVPNASSKDGSTYRALFCDSCGKNYNNGNVRMAKEPVLA
Ga0187819_100547831	3300017943	Freshwater Sediment	LTKANGWNTFEGASARDGTSYRALFCDSCGKNYNNGNVRMAKEPVLV
Ga0187780_101579934	3300017973	Tropical Peatland	KAKGWNTFEGVTAKDGTSYRALFCDSCGKNYNNGNVRLAKEPVLV
Ga0187816_105635851	3300017995	Freshwater Sediment	DGMDYICEHLFQALTQSGKLTKVNGWNPLQNASAKDGTTYRALFWDSCGKNYNNGNVRLAKEPVLV
Ga0187810_102203111	3300018012	Freshwater Sediment	TQAEGMEYICEHLFQGLTQAGKLTRTKGWNPVPNASSKDGSTYRALFCDSCGKNYNNSNVRMAKEPVMA
Ga0179590_11158722	3300020140	Vadose Zone Soil	FDTASSKDGSTYRALFCDSCAKNHNNGNIRMAKEPVLV
Ga0210407_102731401	3300020579	Soil	LTQSGKLTKAKGWNPLPNASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV
Ga0210404_104343401	3300021088	Soil	DGMDYICEHLFQALTQSGKLTKVKGWNPLPNASAKDGTTYRALFCDSCAKNYNNGNVRMAKEPVLV
Ga0210400_103208922	3300021170	Soil	QALTQTGKLTKVKGWNPFENASAKDGTTYRALFCDSCGKNYNNGHVRMAKEPVLV
Ga0210400_103218723	3300021170	Soil	ALTDRGKLTKEKGWNPVPNASSKDGATYRALFCDSCGKNYTHGHVRMAKEPVLV
Ga0210388_113391501	3300021181	Soil	LQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKDPVLV
Ga0210393_103766531	3300021401	Soil	NPLQNASAKDGTTYRALFCDSCGKNYNNSNVRLAKEPVLV
Ga0210393_108817702	3300021401	Soil	AGGMEYICEHLFQALTDRGKLTKEKGWNPVPNASSKDGANYRALFCDSCGKNYTQGHVRMAKEPVLV
Ga0210384_107680121	3300021432	Soil	SGKLTKVKGWNPFPEASTKEGTTHRALFCDSCEKNYKDGNVRMAKEAVLV
Ga0210391_109894861	3300021433	Soil	NPIPDASAKDGTTYQALFCDSCEKNYNNGNVRMAKEPVLV
Ga0210398_110777492	3300021477	Soil	PNASAKDGSTYRALFCDSCGKNYNNGNVRMAKEPVLA
Ga0210410_105637291	3300021479	Soil	LPNATAKDGSTYRALFCDSCGKNYNNGNVRMAKEPVLV
Ga0210409_100719193	3300021559	Soil	MDYICEHLFQGLTQAGKLTKAKGWNPLQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV
Ga0210409_115917041	3300021559	Soil	ALTDRGKLTKEKGWNPVPNASSKDGATYRALFCDSCGKNYTQGHVRMAKEPVLV
Ga0126371_100337231	3300021560	Tropical Forest Soil	MLATKIEHWNPFQKTTAKDVTTYQALFCDSCAKNDNDGHVRMAKEPVLA
Ga0222729_10522952	3300022507	Soil	DGMEYICEHLFQALTDRGKLTKEKGWNPVPNASSKDGATYRALFCDSCGKNYTHGHVRMAKEPVLV
Ga0242649_10596832	3300022509	Soil	QAGKLTKTKGWNPVPNASSKDGSTYRALFCDSCGKNYNNSNVRMAKEPVLA
Ga0242660_10655363	3300022531	Soil	CEHLFQALSQAGKLTKAKGWNPSPNASAKDGTTYRALFCDSCAKNYNNGNVRMAKEPVLV
Ga0242660_11941002	3300022531	Soil	QAGKLTKAKGWNPSPNASAKDGTTYRALFCDSCAKNYNNGNVRMAKEPVLV
Ga0242661_10135892	3300022717	Soil	KAKGWNPLPNASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV
Ga0242661_10678642	3300022717	Soil	MEYICEHLFQALTDRGKLTKEKGWNPVPNASSKDGATYRALFCDSCGKNYTHGHVRMAKEPVLV
Ga0242657_10271241	3300022722	Soil	KEKGWNPVPNASSKDGANYRALFCDSCGKNYTQGHVRMAKEPVLV
Ga0242657_10859932	3300022722	Soil	MEYICEHLFQGVTQSGKLTKVKGWNPLPDASAKDGTKYRALFCDSCEKNYNGTNVRMAKEPVLV
Ga0208078_10906042	3300025544	Arctic Peat Soil	GYICEHLFQGLTQSGKLTKAKGWNPIPNASAKDGTSYQALFCDSCVKNYNNSNVRTAKEAVLV
Ga0207662_108336461	3300025918	Switchgrass Rhizosphere	NASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV
Ga0207665_102785572	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LTQAGKLTKVKGWNPFGAASAKDGAPYCALLCDSCAKNYNDNNVRTAKEPVLV
Ga0209158_10996822	3300026333	Soil	EYICEHLFQALAQTGKLTKVKGWNPLPNASAKDGTTYRALFCDSCGKNYTSGHVRMAKEPVLV
Ga0209805_10391063	3300026542	Soil	LFQALTQTGKLTQVKGWNPLQNATAKDGNTYRALFCDSCAKNYNNGHVRMAKDPVLV
Ga0179587_101343583	3300026557	Vadose Zone Soil	LTKAKGWNLAENANSKDGTTHRALFCDSCEKNYSNGNVRMAKEAVLV
Ga0209527_10923262	3300027583	Forest Soil	ASAKDGSTYRALFCDSCGKNYKDGNVRMAKEAVLV
Ga0209331_10104261	3300027603	Forest Soil	THSGKLTNAKGWNPFPNASAKDGATYGALFCDSCAKNYNNGNVRMAKEPVLV
Ga0209329_10723981	3300027605	Forest Soil	GMGYICEHLFQALTQSGQLTKAKGWNPFPNASAKDGTTYQALFCDSCEKNYNNGNVRMAKEPVLV
Ga0209625_10007598	3300027635	Forest Soil	EHLFQAFTQSGKLTRVKGWNPTPDASAKDGTTYQALFCDSCEKNYNNGNVRMAKEPVLV
Ga0209073_102304602	3300027765	Agricultural Soil	QNATAKDGTAYRALFCDSCAKNYNDGHVRMAKEPVLA
Ga0209580_104602502	3300027842	Surface Soil	QALTDRGKLTKEKGWNPVPNASSKDGATYRALFCDSCGKNYNNGNVRMAKEPVLV
Ga0209380_102128721	3300027889	Soil	HLFQGLTQAGKLTKTKGWNPLQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV
Ga0209488_112165831	3300027903	Vadose Zone Soil	GLTQAGKLTKAKGWNPLQNASAKDGTTYRALFCDSCGKNYNNGNVRLAKEPVLV
Ga0137415_114709411	3300028536	Vadose Zone Soil	TKAKGWNPLQNASAKDGTTYRALFCDSCGKNYNNGNVRMAKEPVLV
Ga0170824_1158158231	3300031231	Forest Soil	ADGMEYICEHLFQGMTQSGKLTKIKGWNPLPDASAKDGTKYRALFCDSCEKNYNGTNVRMAKEPVLV
Ga0307476_100223922	3300031715	Hardwood Forest Soil	MEYICEHLFQALTDRGKLTKEKGWNPVPNASSKDGANYRALFCDSCGKNYTHGHVRMAKEPVLV
Ga0307474_106526851	3300031718	Hardwood Forest Soil	TKTQGWNPFQNASAKDGTTYRALFCDLCGKNYNNGNVRMAKEPVLV
Ga0306917_107641061	3300031719	Soil	KEKGWNALEHASAKDGTCYRALFCDSCAKNYNNGNVRMAKEPVLV
Ga0306918_107755071	3300031744	Soil	FQNASAKDGTTYRALFCDSCAKNYNNGNVRMAKEPVLV
Ga0307477_103774241	3300031753	Hardwood Forest Soil	GWNPVPNASSKDGATYRALFCDSCGKNYTHGHVRMAKEPVLV
Ga0307477_104603563	3300031753	Hardwood Forest Soil	QAFTQTGKLSKTQGWNPLQNASAKDGTTYRALFCDLCGKNYNNGNVRMAKEPVLV
Ga0307477_111466632	3300031753	Hardwood Forest Soil	GKLTKVKGWNPLQNASAKDGTTYRALFCDSCAKNYNNGNVRMAKEHVLV
Ga0318543_104879821	3300031777	Soil	GKLTKGNGCNPFPNATAKDGTTYRALFCDSCAKNYSKGNLRTAKEAVLV
Ga0307478_100304361	3300031823	Hardwood Forest Soil	ALTDRGKLTKEKGWNPVPNASSKDGANYRALFCDSCGKNYTHGHVRMAKEPVLV
Ga0306925_112261903	3300031890	Soil	FEDASAKDGTSYRALFCDSCGKNYNNGNIRMAKEPLLV
Ga0307479_100545478	3300031962	Hardwood Forest Soil	FQALAQGGKLTKAKGWNPLQNASAKDGTTYRALFCDSCSKNYNNGNVRMAKEPVLV
Ga0307479_103780401	3300031962	Hardwood Forest Soil	FPEASTKEGTTYRALFCDSCEKNYKDGNVRMAKEAVLV
Ga0307479_115559221	3300031962	Hardwood Forest Soil	KLNKVKGWNPSPNASAKDGTTYRALFCDSCAKNYNNGNVRMAKEPVLV
Ga0306924_121825151	3300032076	Soil	LTNEKGWNIFEDAHAKDGTSYRALFCDSCGKNYNNGNIRMAKEPVLV
Ga0306920_1022343782	3300032261	Soil	QALTGTGKLTKEKGWNPFQNASAKDGTTYRALFCDSCAKNYNQGHVRMAKEPVMA
Ga0306920_1041950532	3300032261	Soil	TGKLTKEKGWNALEDASAKDGTCYRALFCDSCGKHYNNGNVRMAKEPVLV
Ga0335077_121734601	3300033158	Soil	MEYICEHLFQGLTQAGKLTKTKGWNPVPNASSKDGSTYRALFCDSCGKNYNNSNVRMAKEPVLA
Ga0310914_115270382	3300033289	Soil	YICEHLFQALTQAGKLTKVNGWNPAPNATAKDGTTYPALFCDSCAKNYSKGNLRTAKEAVLV
Ga0314865_072091_721_894	3300033806	Peatland	LLQALTQTGKLTKEKGWNILEDAIAKDGTSYRALFCDSCGKNYNNGNIRMVKEPVLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072680

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences