Metagenome / Metatranscriptome Family F072666

Overview

Basic Information

• Family ID: F072666
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 121
• Average Sequence Length: 44 residues
• Representative Sequence: EDRWYSPGATYFRVLLANGERYVLRREEAQDVWTLEAFRSPR
• Number of Associated Samples: 105
• Number of Associated Scaffolds: 121

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 3.33 %
• % of genes near scaffold ends (potentially truncated): 94.21 %
• % of genes from short scaffolds (< 2000 bps): 83.47 %
• Associated GOLD sequencing projects: 100
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (91.736 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.967 % of family members)
• Environment Ontology (ENVO): Unclassified (30.579 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (54.545 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 32.86%
  Coil/Unstructured: 67.14%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08327	AHSA1	8.26
PF08281	Sigma70_r4_2	1.65
PF03631	Virul_fac_BrkB	1.65
PF02687	FtsX	1.65
PF07081	DUF1349	1.65
PF13495	Phage_int_SAM_4	0.83
PF08240	ADH_N	0.83
PF00881	Nitroreductase	0.83
PF12762	DDE_Tnp_IS1595	0.83
PF14534	DUF4440	0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.65
COG3506	Regulation of enolase protein 1 (function unknown), concanavalin A-like superfamily	Function unknown [S]	1.65
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.83
COG2315	Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR family	Transcription [K]	0.83
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.83
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.83
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.83
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.83
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.83

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.21 %
Unclassified	root	N/A	5.79 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.21 %
Unclassified	root	N/A	5.79 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.74 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.48 %
Unclassified	root	N/A	5.79 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
Unclassified	root	N/A	5.79 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.48 %

Level 5

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.44 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2.48 %
Unclassified	root	N/A	5.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.22 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.13 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.31 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	2.48 %
Unclassified	root	N/A	5.79 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.83 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.83 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.13 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.83 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2.48 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.48 %
Unclassified	root	N/A	5.79 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.48 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.48 %
Unclassified	root	N/A	5.79 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.65 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.83 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.48 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Unclassified	root	N/A	5.79 %

Level 10

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.48 %
Unclassified	root	N/A	5.79 %

Level 11

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.48 %
Unclassified	root	N/A	5.79 %

Level 12

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	2.48 %
Unclassified	root	N/A	5.79 %

Level 13

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	2.48 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Unclassified	root	N/A	5.79 %

Level 14

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	2.48 %
Unclassified	root	N/A	5.79 %

Level 15

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	2.48 %
Unclassified	root	N/A	5.79 %

Level 16

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	2.48 %
Unclassified	root	N/A	5.79 %

Level 17

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
malvids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids	2.48 %
Unclassified	root	N/A	5.79 %

Level 18

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Brassicales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales	2.48 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Unclassified	root	N/A	5.79 %

Level 19

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Brassicaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae	2.48 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Unclassified	root	N/A	5.79 %

Level 20

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Camelineae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae	2.48 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Unclassified	root	N/A	5.79 %

Level 21

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Arabidopsis	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis	2.48 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Unclassified	root	N/A	5.79 %

Level 22

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.44 %
Acidobacteria bacterium 13_2_20CM_57_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	5.79 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.83 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.83 %
Arabidopsis thaliana	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis → Arabidopsis thaliana	2.48 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Unclassified	root	N/A	5.79 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002917|JGI25616J43925_10068536	All Organisms → cellular organisms → Bacteria	1503
3300004133|Ga0058892_1320653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560
3300004140|Ga0058894_1479693	All Organisms → cellular organisms → Bacteria → Proteobacteria	529
3300005332|Ga0066388_101513145	All Organisms → cellular organisms → Bacteria	1175
3300005447|Ga0066689_10125642	All Organisms → cellular organisms → Bacteria	1502
3300005450|Ga0066682_10436973	All Organisms → cellular organisms → Bacteria	833
3300005556|Ga0066707_10064065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2172
3300005557|Ga0066704_10959728	All Organisms → cellular organisms → Bacteria	528
3300005602|Ga0070762_10280903	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044
3300005602|Ga0070762_11161570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7	533

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	7.44%
Plants	Host-Associated → Plants	0.83%
Terrestrial	Environmental → Terrestrial	91.74%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	5.79%
Peat	Environmental → Terrestrial → Peat	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%
Sediment	Environmental → Aquatic → Sediment	1.65%
Soil	Environmental → Terrestrial → Soil	90.08%

Type

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	15.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.79%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.65%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.65%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.65%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental
3300004133	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220 (Metagenome Metatranscriptome)	Environmental
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_100685362	3300002917	Grasslands Soil	VAIEDRWYSPGATYFRVRVDDGDRYLLRHQEAQDVWTLAGYRAAP*
Ga0058892_13206532	3300004133	Forest Soil	EVEDRWYSPGATYFRVLLANGERYVLRREDAQDVWTLQAFRSPA*
Ga0058894_14796932	3300004140	Forest Soil	DRWYSPGATYFRVLLANGERYVLRREDAQDLWTLQAFRAPV*
Ga0066388_1015131452	3300005332	Tropical Forest Soil	RWYSPGETYFRVRVEGGDRYVLRHEEAQDVWSLEGYRSGTN*
Ga0066689_101256421	3300005447	Soil	VAIEDRWYSPGATYFRVLLDDGDRCVLRHEEAQDVWSLAGYRAAGVS*
Ga0066682_104369731	3300005450	Soil	EDRWYSPGVTYFRVLVEDGDRYLLRHQEAQDVWTLTGYRAAI*
Ga0066707_100640652	3300005556	Soil	RWYSPGATYFRVLVDDGDRYVLRHEEAQDVWSLTGYRAAS*
Ga0066704_109597281	3300005557	Soil	EIEDRWYSPGATYFRVLLANGDRYVLRREEAQDVWTLEAFRSPM*
Ga0070762_102809033	3300005602	Soil	VEDRWYSPGETYFRVRVEGGDRYVLRYMEAQDIWSLEGYRSAARC*
Ga0070762_111615701	3300005602	Soil	NSPGATFFRVVVDGGDHYVLRHEDAQDVWCLTAFRAAQRPTYKD*
Ga0070766_112508033	3300005921	Soil	EDRWYSPGETYFRVRVEGGDRYVLRYVEAQDVWSLEGYRSAVR*
Ga0075028_1000524773	3300006050	Watersheds	EDRWYSPGATYFRVLMDDGDRYLLRHEEAQDVWSLTGYRAAVG*
Ga0070716_1008353112	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TYFRVLLANGERYVFRHQEAQDLWTIEAFRRPVAR*
Ga0075424_1021037792	3300006904	Populus Rhizosphere	EVEDRWYSPGETYFRVVVANGDHYVLRHMEAQDVWSIEGFRSNARRTDEKP*
Ga0079219_121934741	3300006954	Agricultural Soil	EQMVDVAEVEDRGYSPGATYFRVLLASGERYVLRREDAQDSWTLEAFRAPL*
Ga0099794_106924291	3300007265	Vadose Zone Soil	DRWYSPGATYFRVLLSNGERYVLRREDAQDVWTLEAFRAPV*
Ga0099795_103162652	3300007788	Vadose Zone Soil	EDRWYSPGATYFRVLVDDGDRYLLRHEEAQDVWTLVGYRAR*
Ga0066710_1041345121	3300009012	Grasslands Soil	YSPGATFFRVVVDGGDRYVLRHEEAQDVWSLIGYRAIA
Ga0116107_10140573	3300009548	Peatland	AEVEDRWYSPGETFFRVRLANGDRYVLRHVEAQDTWSLEGFRSGAN*
Ga0116217_101488392	3300009700	Peatlands Soil	WYSPGETFFRVRVANGDRYVLRHVEAQDTWSLEAFRSGSKLATRQSMR*
Ga0126384_115702381	3300010046	Tropical Forest Soil	AEIEDRWYSPGVTFFRVRLANGDRYVLRRIEAQEVWQLEAYRFSGRVTSH*
Ga0126382_106290332	3300010047	Tropical Forest Soil	VIEIEDRWYSPGETYFRVLASDGDRYVLRHVEAQHYWTLAAYRRSVSE*
Ga0099796_101849701	3300010159	Vadose Zone Soil	PGATYFRVLLVNGERYMLRRDDAQDVWTFEAFRSPG*
Ga0074045_103063581	3300010341	Bog Forest Soil	EVSEVEDRWYSPGETFFRVRVANGDRYVLRHVEAQDTWSLQGFRSGAN*
Ga0074045_103443812	3300010341	Bog Forest Soil	MENRRYSPGETFFRVRVANGDRYVLRRVDAQDTWTIEGFRRASS*
Ga0126372_110732551	3300010360	Tropical Forest Soil	AVEDRWYSPGETYFRVVTSDGDHYVLRHTEAQDLWTLTAYRQARD*
Ga0126372_129695132	3300010360	Tropical Forest Soil	AVEDRWYSPGETYFRVVTSDGDRYVLRHTEAQDLWTLTAYTAGRQLT*
Ga0126356_112834342	3300010877	Boreal Forest Soil	GATFFRVLLTNGERYVLRREDAQDMWTLEAFRSPG*
Ga0137392_112501402	3300011269	Vadose Zone Soil	WYSPGATYFRVLLATGERYVLRREDAQDLWTLQAFRSPG*
Ga0137392_116269111	3300011269	Vadose Zone Soil	PGATYFRVLVDDGDRYLLRHEEAQDVWSIAGYRAAVVA*
Ga0137391_113256763	3300011270	Vadose Zone Soil	ATYFRVLLSNGERYVLRREDAQDVWTLEAFRAPV*
Ga0137393_1000148220	3300011271	Vadose Zone Soil	VAIEDRWYSPGATYFRVVVDGGDRYLLRHEEAQDVWTLAGYRAAVVGQFPVSP*
Ga0137393_104009683	3300011271	Vadose Zone Soil	VEDRWYSPGATYFRVLLANGERYVLRREDAQDVWTLEAFRSPR*
Ga0137393_112202071	3300011271	Vadose Zone Soil	AQVEDRWYSPGETYFRVQTTDGDRYVLRHTEAQDVWSLIAFRAETG*
Ga0137393_115783611	3300011271	Vadose Zone Soil	DRWYSPGATYFRVRVEDGDRYVLRHEEAQDVWSLVGYRADA*
Ga0137389_109555062	3300012096	Vadose Zone Soil	VDVAEIEDRWYSPGATYFRVLLATGERYVLRREDAQDLWTLQAFRSPG*
Ga0137388_101069495	3300012189	Vadose Zone Soil	DVANVEDRWYSPGATYFRVLLANGERYVLRREDAQDVWTLEAFRSPR*
Ga0137388_104609011	3300012189	Vadose Zone Soil	IAEVEDRWYSPGATYFRVLLANGERYVLRREDAQDIWTLQAFRSPG*
Ga0137388_106425772	3300012189	Vadose Zone Soil	VAIEDRWYSPGATYFRVLVEDGDRYLLRHEEAQDVWSLAGYRAAVGCQFPVSP*
Ga0137383_102231433	3300012199	Vadose Zone Soil	AIEDRWYSPGATYFCVLLDDGDRYVLRHEEPQDVWSLAGYRAAAVGLFPVSQPLAN*
Ga0137382_106863981	3300012200	Vadose Zone Soil	GATYFRVLLANGERYVLRRQDAQDVWTLEAFRSPR*
Ga0137363_102072213	3300012202	Vadose Zone Soil	TEDRWYSPGATFFRVVVDGGDRYVLRHEEAQDVWSLIGYRAIA*
Ga0137363_104387242	3300012202	Vadose Zone Soil	MVEIAEVEDRWYSPGATYFRARLANGERYVLRREDAQDVWTLQAFRSPG*
Ga0137363_113380971	3300012202	Vadose Zone Soil	PGATYFRVLLSNGERYVLRREDAQDVWTLEAFRAPV*
Ga0137399_115838181	3300012203	Vadose Zone Soil	SPGATYFRVLLSNGERYVLRREDAQDVWTLEAFRAPV*
Ga0137362_115981471	3300012205	Vadose Zone Soil	DRWCSPGATYFRVLLANGERYVLRREDAQDVWTLEAFRSPR*
Ga0137390_120294001	3300012363	Vadose Zone Soil	EDRWYSPGATYFRVLVEDGDRYLLRHEEAQDVWTLAGFRAAVGCQFPVTP*
Ga0137358_100463833	3300012582	Vadose Zone Soil	DRWYSPGATFFRVVVDGGDRYVLRHEEAQDVWSLIGYRAIA*
Ga0137394_102491422	3300012922	Vadose Zone Soil	EDRWYGPGATFFRVVVDGGDRYVLRHEEAQDVWSLIGYRAAA*
Ga0137410_115147572	3300012944	Vadose Zone Soil	VEGRWYSPGATYFRVLLANGERYVLRREDAQDVWTLEAFRSPR*
Ga0164301_119182802	3300012960	Soil	RWYSPGETYFRVRVEGGDRYVLRYVEAQENWSLEGYRSGTK*
Ga0181532_100539915	3300014164	Bog	VEVEDRWYSPGETFFRVRVGGGDRYVVRHVVAQDIWSLEGYRTGAN*
Ga0137411_11946982	3300015052	Vadose Zone Soil	FRVIVRDGDRYLLRHEEAQDVWSLAGYRAGGCGSVSG*
Ga0182033_108853802	3300016319	Soil	PGETYFRVRVANGDRYVLKHMEAQDVWSLEGFRSGAN
Ga0182034_104655291	3300016371	Soil	DRWYSPGETYFRVRVANGDRYVLKHVEAQDTWSLEGFRSGAN
Ga0182034_114142881	3300016371	Soil	SPGETYFRVRVMNGDRYVLKHIEAQDTWSLEGFRSGAN
Ga0187802_104629521	3300017822	Freshwater Sediment	SPGETYFRVRLEGGDRYVLRHVDAQDLWYLEGYRSGAN
Ga0187818_100067335	3300017823	Freshwater Sediment	VGIDDRWYSPGATFFRVVVEGGDRYVLRHEEAQDAWHLTAYRAETR
Ga0187819_100161834	3300017943	Freshwater Sediment	VGIDDRWYSPGATFFRVVVEGGDRYVLRHEEAQDAWHLAAYRAETR
Ga0187817_102105751	3300017955	Freshwater Sediment	YSPGETYFRVRLEGGDRYVLRHVDAQDLWYLEGYRSGAN
Ga0187779_106810752	3300017959	Tropical Peatland	PGEEYFRVLTSDGDRYVLRHVEAQDVWSLTAYRAKEPSPR
Ga0187766_100675553	3300018058	Tropical Peatland	DRWYSPGEEYFRVLTSDGDRYVLRHVEAQDVWSLTAYRAKEPSPR
Ga0187766_102335921	3300018058	Tropical Peatland	VEDRWYSPGETYFRVRVEGGDRYVLKHVEAQDVWSLEGFRSRAN
Ga0187769_103725843	3300018086	Tropical Peatland	EDRWYSPGETYFRVLTSDGDRYVLCHVEAQDVWSLTAYRAGKTQAR
Ga0187771_101439242	3300018088	Tropical Peatland	WYSPGETYFRLRVEGGDRYVLRHIEAQDVWSLEGYRSGAN
Ga0187800_14303112	3300019278	Peatland	EDRWYSPGETYFRVKVEGGDRYVLRHVEAQDVWSLEGFRKSSETKGIEK
Ga0210407_103089363	3300020579	Soil	DVEDRWYSPGATYFRLRLANGERYVVRREDAQDAWTLEAFRSPG
Ga0210403_107631611	3300020580	Soil	WYSPGATYFRVLLANGERYVLRREDAQDVWTLQAFRAPV
Ga0210403_114835601	3300020580	Soil	VVAIEDRWHSPGATYFRVVVDGGDRYLLRHEEAQDVWSIAGYRAGGSGSVSG
Ga0210401_105639811	3300020583	Soil	SPGATYFRIAVEGGDRYVLRHEEAQDVWSLSAFRAETKQARTR
Ga0210406_103305181	3300021168	Soil	GATYFRVLLANGERYVLRREDAQDVWTLEAFRSPGHH
Ga0210400_107938361	3300021170	Soil	EIVSLEDRWYSPGATYFRIAVEGGDRYVLRCEEAQGVWSLSAFRAKTKRARTR
Ga0210400_110082482	3300021170	Soil	EDRWYSPGATYFRVLLANGERYVLRREEAQDVWTLEAFRSPR
Ga0210389_109432032	3300021404	Soil	WYAPGETVFRVRVFNGDRYILRHVEAQDVWTLEGYRAGAPHHSTD
Ga0210390_114926692	3300021474	Soil	AIEDRWYSPGYTYFRVLLSNGQRYVLGRQEAQEVWSLEAFRAKTTEGTVT
Ga0210402_103383872	3300021478	Soil	VEDRWYSPGATYFRVLAVSGDRYVLRRDEGQDVWSLTAYRRLSKGAPQTR
Ga0210410_101092171	3300021479	Soil	IAEVEDRWYSPGATYFRVLLPNGERYVLRREDAQDVWTLEAFRSPGHH
Ga0137417_13988375	3300024330	Vadose Zone Soil	AIEDRWYSPGATYFRVLLDDGDRYVLRHEEAQDVWTLAGYRAAVITRLAET
Ga0208192_10083711	3300025477	Peatland	AEVEDRWYSPGETFFRVRLANGDRYVLRHVEAQDTWSLEAFRSGAN
Ga0207665_105807552	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	APGFTYFRVLLANGERYVFRHQEAQDLWTIEAFRRPVAR
Ga0209235_10982883	3300026296	Grasslands Soil	RWYSPGATYFRVLVDDGDRYLLRHEEAQDIWSLAGYRAAVVGSVSG
Ga0209237_12483242	3300026297	Grasslands Soil	VEDRWYSPGETYFRVLTSDGDRYVLRHTEAQDVWSLFGYRAKVVSQFEG
Ga0209236_12080932	3300026298	Grasslands Soil	RWYSPGAIFFRVLASDGNRYVLRHEEAQDTWSLEAFRATR
Ga0209802_10021051	3300026328	Soil	VEDRWYSPGETYFRVLTSDGDRYVLRHTEAQDVWSLFGYRANA
Ga0257163_10315422	3300026359	Soil	VEDRWYSPGATYFRVLLVNGERYVLRREEAQDVWTLEAFRSPR
Ga0257181_10280943	3300026499	Soil	DIADVEDRWFSPGATYFRVLLSNGERYVLRREHAQDVWTLEAFRAPV
Ga0209648_102860882	3300026551	Grasslands Soil	WYSPGATYFRVLLGNGERYVLRREDAQDVWTLEAFRSPAVR
Ga0207821_10146071	3300026869	Tropical Forest Soil	VEDRWYSPGETYFRVKVEGGDRYLLKHVEAQDVWSLEGYRSGVNE
Ga0207805_10034963	3300026887	Tropical Forest Soil	LAVTDVEDRWYSPGETYFRVKVEGGDRYLLKHVEAQDVWSLEGYRSGVNE
Ga0207860_10029401	3300026921	Tropical Forest Soil	EDRWYSPGETYFRVKVEGGDRYLLKHVEAQDVWSLEGYRSGVNE
Ga0207741_10279741	3300026941	Tropical Forest Soil	AEVEDRWYSPGETYFRVRVANGDRYVLKHIEAQDVWSLEGFRSGAN
Ga0209730_10257102	3300027034	Forest Soil	DRWYSPGATYFRVLLANGERYVLRREDAQDVWTLQAFRAPE
Ga0209733_10335921	3300027591	Forest Soil	PGATYFRLLMDDGDRYLLRHEEAQDVWSLAGYRAAA
Ga0209528_10155011	3300027610	Forest Soil	TEVEDRWYSPGATYFRVLLVNGERYVLRREDAQDTWTLEAFRSPG
Ga0209076_10525763	3300027643	Vadose Zone Soil	EDRWYSPGATYFRVLLANGERYVLRREGAQDVWTLQAFRSPA
Ga0207862_11443861	3300027703	Tropical Forest Soil	EDRWYSPGETYFRVRVTNGDRYVLKHIEAQDIWSLEGFRSGAN
Ga0209580_100977121	3300027842	Surface Soil	RWYSPGATFFRVLLANGERYVLRREDAQDTWTLEAFRSPG
Ga0209693_100196463	3300027855	Soil	EDRWYSPGTTFFRVRLADGERYVLRRIEAQEVWLIEAYRSSARHTSD
Ga0209701_106106862	3300027862	Vadose Zone Soil	EDRWYSPGATYFRVLLGNGERYVLRREDAQDRWTLEAYRSPG
Ga0209380_108535881	3300027889	Soil	EDRWYSPGETYFRVRVEGGDRYVLRYVEAQDVWSLEGYRSAVR
Ga0209698_111637272	3300027911	Watersheds	IVAIEDRWYSPGATYFRVCVTGGDRYVLRHQEAQDVWSLIGYRAAVVGQISD
Ga0308309_113496281	3300028906	Soil	SPGETYFRVCVEGGDRYVLRYVEAQDVWSLEGYRRAARR
Ga0318542_106010011	3300031668	Soil	WYSPGETYFRVRVMNGDRYVLKHIEAQDTWSLEGFRSGAN
Ga0310686_1191791872	3300031708	Soil	YSPGETFFRVRVEGGDRYVLRYVEAQDIWSLEGYRSGARQ
Ga0307469_110946512	3300031720	Hardwood Forest Soil	SPGATFFRVLLANGERYVLRREDAQDTWTLEAFRSSG
Ga0307469_111116581	3300031720	Hardwood Forest Soil	ALEIVETEDRWYEPGATFFRVVVKGGDRYVLRHEEAQDVWSLVGYRATA
Ga0306918_100727344	3300031744	Soil	RWYSPGETYFRVRVTNGDRYVLKHIEAQDVWSLEGFRSGAN
Ga0307477_100708284	3300031753	Hardwood Forest Soil	EVEDRWYSPGATYFRVLLANGERYVLRREDAQDVWTLEAFRSPR
Ga0307475_115095211	3300031754	Hardwood Forest Soil	VEIAEVEDRWYSPGATYFRVRLANGERYVSRREDAQVVWTLEAFRSPG
Ga0307473_102128922	3300031820	Hardwood Forest Soil	AIEVVETEDRWYEPGATFFRIVVDGGDRYVLRHEEAQDTWSLCAYRGKTSNEALH
Ga0306919_112604912	3300031879	Soil	PGETYFRVRVMNGDRYVLKHIEAQDTWSLEGFRSGAN
Ga0306925_114226221	3300031890	Soil	WYSPGETYFRVRVEGGDRYVLRHEEAQDVWSLEGYRSGTN
Ga0310916_100591951	3300031942	Soil	WYSPGETYFRVRVTNGDRYVLKHIEAQDVWSLEGFRSGAN
Ga0310910_109885781	3300031946	Soil	YSPGETYFRVRVMNGDRYVLKHIEAQDTWSLEGFRSGAN
Ga0311301_103545291	3300032160	Peatlands Soil	TLAVAEVEDRWYSPGETFFRVRLANGDRYVLRHVEAQDTWSLEAFRSGAN
Ga0307472_1019437702	3300032205	Hardwood Forest Soil	VEDRWYSPGSTYFRVLLCSGERYVLCRQEAQDVWTVEAFRTTSD
Ga0335071_113717361	3300032897	Soil	RWYSPGETFFRVVTESGDRYLLRHVEAQDQWTLEGYRSAALTR
Ga0335072_111599051	3300032898	Soil	EVEDRWYSPGATFFKVRLENGNRFVLRHEEAQDTWSISAFRRA
Ga0335083_109709392	3300032954	Soil	PIAEIEDRWYSPGETFFRVVTESGDRYLLRHVEAQDQWTLEGYRSAALTR
Ga0326728_109154131	3300033402	Peat Soil	EVEDRWYSPGETFFRVRVANGDRYVLRHVEAQDTWSLEGFRRGTN
Ga0371490_10579092	3300033561	Peat Soil	YSPGETFFRVRVANGDRYVLRHVEAQDTWSLEGFRRGTN