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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F072654 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 121 |
| Average Sequence Length | 134 residues |
| Representative Sequence | MSRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK |
| Number of Associated Samples | 97 |
| Number of Associated Scaffolds | 121 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 73.55 % |
| % of genes near scaffold ends (potentially truncated) | 41.32 % |
| % of genes from short scaffolds (< 2000 bps) | 86.78 % |
| Associated GOLD sequencing projects | 83 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.70 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (56.198 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere (10.744 % of family members) |
| Environment Ontology (ENVO) | Unclassified (54.545 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (68.595 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
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| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 1.80% β-sheet: 42.51% Coil/Unstructured: 55.69% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.70 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 121 Family Scaffolds |
|---|---|---|
| PF00072 | Response_reg | 27.27 |
| PF07586 | HXXSHH | 23.14 |
| PF00486 | Trans_reg_C | 5.79 |
| PF10518 | TAT_signal | 2.48 |
| PF12704 | MacB_PCD | 2.48 |
| PF08207 | EFP_N | 1.65 |
| PF09285 | Elong-fact-P_C | 0.83 |
| PF00856 | SET | 0.83 |
| PF01243 | Putative_PNPOx | 0.83 |
| PF02518 | HATPase_c | 0.83 |
| COG ID | Name | Functional Category | % Frequency in 121 Family Scaffolds |
|---|---|---|---|
| COG0231 | Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) | Translation, ribosomal structure and biogenesis [J] | 1.65 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 56.20 % |
| Unclassified | root | N/A | 43.80 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 10.74% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 9.09% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 4.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.13% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.13% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 4.13% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 4.13% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.31% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 3.31% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.31% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 3.31% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 2.48% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.48% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.48% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.48% |
| Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 2.48% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.48% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.48% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.48% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.48% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.48% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.65% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.65% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.65% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.65% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.65% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.65% |
| Watersheds | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds | 0.83% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.83% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.83% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.83% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.83% |
| Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 0.83% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.83% |
| Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 0.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.83% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2199352025 | Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001686 | Grasslands soil microbial communities from Hopland, California, USA | Environmental | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005168 | Soil and rhizosphere microbial communities from Laval, Canada - mgLPC | Environmental | Open in IMG/M |
| 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
| 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
| 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
| 3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Environmental | Open in IMG/M |
| 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009649 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059 | Environmental | Open in IMG/M |
| 3300009660 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 | Environmental | Open in IMG/M |
| 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014502 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020034 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2 | Environmental | Open in IMG/M |
| 3300021861 | Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300024288 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300024347 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026275 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes) | Environmental | Open in IMG/M |
| 3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028768 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119 | Environmental | Open in IMG/M |
| 3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Host-Associated | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031834 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0 | Environmental | Open in IMG/M |
| 3300032163 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0 | Environmental | Open in IMG/M |
| 3300034268 | Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| deepsgr_02104240 | 2199352025 | Soil | MTGKMTTMLAVLALTAGLSAQRETASGLTGTWNMGLEAGHVIPVALVLKQDGDLLTGTISMPTQRVGQTVDVPLKGTVSNGTFTLSGTVEGAKDPTTIEIKGKLNDEGIIEGRVAMSGTSGPHGDMAYTAERLKERK |
| INPhiseqgaiiFebDRAFT_1003457571 | 3300000364 | Soil | MSRTTTTMIAVVALAAGLSAQHGKTETPSLTGTWNMGXXGGXVIPVALVLKQDGXXLTGTISMPTXRAGNTVXVALKGXIXXGAXTXXGXVEGAKXPTTIDISGKLNDEGMLAGAVTMGGRG |
| C688J18823_101322962 | 3300001686 | Soil | MTKVVATMITMVALAAGVAAQTKKAEGLTGTWNMGLQGGHVIPVALVLKQDGDALTGVVSMPTQKIGTTVDVALKGGIASNAFTLSGEVEGAKEPATIEITGKLTDEGMLEGTVTMGGRDASHREMPYTAERLKERSK* |
| C688J18823_101633022 | 3300001686 | Soil | MNRTIATMVAVMALAGGLTAQHGKTGAASLTGTWNMGLEGGHVIPVALVLNQDGDALSGTISLPTQHIGQTVDVALKGEILNGAFTLSGAVESAKDPTTIDITGRLNEEGVLEGRVKMSGTQGPHGDMPYTAERLKERK* |
| C688J35102_1188808231 | 3300002568 | Soil | MTHTLTTVCTLLMLAAAPFAQHDGHAADTTNLTGTWNMGLQGGHVIPVALVLKQEGTTLSGTIAMPTQPPGQTVDVDLKGSLTSGAFTLAGNVEGAKEPTSIEIKGKLNDEGTIDGTLTMNGASAHPREMPYTAERLKERK* |
| C688J35102_1197182501 | 3300002568 | Soil | MTKVVATMITMVALAAGVAAQTKKAEGLTGTWNMGLQGGHVIPVALVLKQDGDALTGVVSMPTQKIGTTVDVALKGGIASNAFTLSGEVEGAKEPATIEITGKLTDEGMLEGTVTM |
| Ga0062593_1000252153 | 3300004114 | Soil | MNRTMTTMIAVLALAAGLSAQHGKTQAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK* |
| Ga0062589_1000461923 | 3300004156 | Soil | MNRTMTTMIAVLALAAGLSAQHGKTQAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTLEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK* |
| Ga0062590_1029868541 | 3300004157 | Soil | MSRTMTTMIAVLALAAGLSAQHGKTETPGVTGTWNMGLEGDHVIPVALVLKQDGEALTGTISMPTQRAGSTVDVALKGSIAKGTFTLSGAVEGAKEPTTIAISGTLNDEGMLAGTVSMGG |
| Ga0062594_1001182121 | 3300005093 | Soil | MNRTMTTMIAVLALAAGLSAQHGKTQVPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYT |
| Ga0066809_102172701 | 3300005168 | Soil | MTRNTTTMLAVLALTAGLSAQKKADSGLSGTWNMGLEAGHVIPVALVLKQDSDALTGTISMPTQRAGQTVDVPLKGTVSNGAFTLSGTVEGANDPTTIEIKGKLNDEGLIEGRVAMSGTSGPHGDMAYTAERLKERK* |
| Ga0065714_103736731 | 3300005288 | Miscanthus Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK* |
| Ga0065712_102614312 | 3300005290 | Miscanthus Rhizosphere | MNRTMTTMIAVLALAASLSAQHGKTEAPSLTGTWNMGLEGDHVIPVALVLKQDGEALTGTISLPTNRTGNTVDVALKGSIARGIFTLSGAVEGAKEPTTIEIGGKLNDEGMLAGKVTMGGRGDGHHDMPYTAERLKERK* |
| Ga0070690_1001250892 | 3300005330 | Switchgrass Rhizosphere | MPKMTTMIAVLALTASVFAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTVDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAAHGGMPYTAERLKERK* |
| Ga0070690_1005587551 | 3300005330 | Switchgrass Rhizosphere | MAKRVTTTIAVLALAAGLSAQHAKTDTPSLTGTWQMGLQGGHVIPVALVLKQDGEALTGTISMPTQRIGQTVDVALKGELSGGAFTLSGTVEGAKDPTTIEISGALNDEGMLEGRVVMSGASGPHGDMPYSAERLKERK* |
| Ga0068869_1005367221 | 3300005334 | Miscanthus Rhizosphere | QRMNRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK* |
| Ga0070666_102303632 | 3300005335 | Switchgrass Rhizosphere | MPKMTTMIAVLALTASVFAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTMDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAAHGGMPYTAERLKERK* |
| Ga0070666_105963512 | 3300005335 | Switchgrass Rhizosphere | MTKQLTTMMAVLALVGSISAQSKKAEGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK* |
| Ga0070682_1018663551 | 3300005337 | Corn Rhizosphere | MTKQLTTMIAVLALAGSVSAQTKKAEGLTGTWNMGLQGGHVIPVALVLTQEGETLTGVVSMPTQKIGQTVDVPLKGTLASGAFSLAGTVEGAKDPTTIEITGKLNDEGMLEGRVVMSGTSGPHGDMRYTAERLKERK* |
| Ga0068868_1006031171 | 3300005338 | Miscanthus Rhizosphere | MMKSVMTTIAVVALAVGLSAQHGKKEAPSLTGTWNMGLEGGHVIPVALVLKQDGSTLTGNIAMPTQRIGTTVDVALKGEIADAAFTLSGSVEGAKDPMTIEIKGKLNDEGMLEGRVVMKGATGPHGDMPYTAERLKERGK* |
| Ga0070669_1002952131 | 3300005353 | Switchgrass Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIDISGKLNDEGMLAGKVTMGGRGDGHHDMPYTAERLKERK* |
| Ga0070673_1009854241 | 3300005364 | Switchgrass Rhizosphere | MTKQLTTMMAVLALVGSISAQSKKAEGLTGTWNMGLQGGHVIPVALVLTQEGETLTGVVSMPTQKIGQTVDVPLKGTLASGAFSLSGTVEGAKDPTTIEITGKLNDEGMLEGRVVMSGTSGPHGDMPYTAERLKER |
| Ga0068867_1006468042 | 3300005459 | Miscanthus Rhizosphere | MSRTMTTMIAVLALAAGLSAQHKTEASLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK* |
| Ga0073909_106526402 | 3300005526 | Surface Soil | MTRNTTTMLAVLALTAGLSAQKKADSGLSGTWNMGLEAGHVIPVALVLKQDSDALTGTISMPTQRAGQTVDVPLKGTVSNGAFTLSGTVEGAKDPTTIEIKGKLNDEGIIEGRVAMSGTSGPHGDMAYTAERLKERK* |
| Ga0070684_1009677152 | 3300005535 | Corn Rhizosphere | MRTTMTTMIAVIALASGLAAQHGHSDAAASLTGTWNMGLQGGHVIPVALVLKQDGDAVTGTVSMPTQKIGQTVDVALTGTLAKGAFTLKGDVDGAKEPTTIEISGALNEEGMLEGRVLMTGAQGPHGAMPYTAERLKERGK* |
| Ga0070684_1011365781 | 3300005535 | Corn Rhizosphere | MSRTMTTMISVLALAAGLSAQHGKTETPSLTGTWNMGLEGGHVIPVALVLKQDGEVLTGTIAMPTSRAGNTVDVALKGTISKGSFTLSGTVEAAKEPTTIDISGKLNDEGMLAGSVTMGGRGDGHRDMPYTAERLKDRK* |
| Ga0070686_1004948782 | 3300005544 | Switchgrass Rhizosphere | MAKSVTTTIAVLALAAGLSAQHGKTDTPSLTGTWQMGLQGGHVIPVALVLEQNGESLTGTISMPTQRIGQTVDVALKGELAKGAFKLSGAVEGAKDPTTIEISGALNDEGMLEGRVVMSGASGPHGDMPYTAERLKERK* |
| Ga0070665_1000020513 | 3300005548 | Switchgrass Rhizosphere | MTKQLTTMIAVLALAGSVSAQTKKADGLTGTWNMGLQGGHVIPVALVLTQEGETLTGVVSMPTQKIGQTVDVPLKGTLASGAFSLSGTVEGAKDPTTIEITGKLNDEGMLEGRVVMSGTSGPHGDMPYTAERLKERK* |
| Ga0070664_1004791432 | 3300005564 | Corn Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLSGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVAMTGAQGPHGDMPYTAERLKERK* |
| Ga0068857_1020866422 | 3300005577 | Corn Rhizosphere | MNRTMTKTIAVLALAAGLSAQHGKTETPSLTGTWNMGLEGDHVIPVALVLKQDGEALSGTIAMPTSRAGNTVDVALKGAISKGSFTLSGTVEGAKEPTTIDISGQLNDEGMLAGK |
| Ga0070702_1008955781 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MMKSVMTTIAVVALAVGLSAQHGKKEAPSLTGTWNMGLEGGHVIPVALVLKQDGSTLTGTIAMPTQRIGTTVDIALKGEIADAAFTLSGSVEAAKDPMTIEIKGKLNDEGMLEGRVVIKGATGPHGDMPYTAERLKERGK* |
| Ga0068864_1003801721 | 3300005618 | Switchgrass Rhizosphere | SRTMTTMIAVLALAAGLAAQHGKTETPRLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK* |
| Ga0068866_111586941 | 3300005718 | Miscanthus Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGEGHHDMPYTAERLKERK* |
| Ga0066903_1018466872 | 3300005764 | Tropical Forest Soil | MPKMITMFAVLVLTAALAAQKRAEPELTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTVDVGLKGTVTGGALELTGTVEGAKEPTTIEITGKLNDEGVIEGRVVMSGASAPHGGMPYTAERLKERK* |
| Ga0068851_101948172 | 3300005834 | Corn Rhizosphere | VLALTGSVFAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTMDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAAHGGMPYTAERLKERK* |
| Ga0068858_1010505481 | 3300005842 | Switchgrass Rhizosphere | TTMIAVLALAAGLSAQHGKTDTPSLTGTWQMGLQGGHVIPVALVLEQNGESLTGTISMPTQRIGQTVDVALKGELAKGAFKLSGAVEGAKDPTTIEISGALNDEGMLEGRVVMSGTSGPHGDMPYTAERLKERK* |
| Ga0075023_1000942542 | 3300006041 | Watersheds | MTKCVSTMAVVLGLAAVLSAQTKKAEGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDVALKGTLASGAFALSGTVEGAKDPTTIEITGKLNDEGMLEGRVVMGGTSGPHGDMPYTAERLKERK* |
| Ga0075028_1003138071 | 3300006050 | Watersheds | VLALAGSVSAQTKKAEGLTGTWNMGLEGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDVALKGTLASGAFALSGTVEGAKDPTTIEITGKLNDEGMLEGRVVMGGTSGPHGDMPYTAERLKERK* |
| Ga0070716_1012946191 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MRRTMTTAMAMMALAAGLAAAESTSLTGTWNMGLQAGHVLPVALVLKQDGDAMTGVVSMPTQKIGVTVDVALKGTLAKGEFTVTGDVENAKEPTTIEIVGKLNDDGTLEGTVTMGGQGDSHRKMPYTAERLKERK* |
| Ga0097621_1009738561 | 3300006237 | Miscanthus Rhizosphere | MPKMTTMIAVLALTASVFAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTMDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAPHGGMPYTAERLKERK* |
| Ga0068865_1011581281 | 3300006881 | Miscanthus Rhizosphere | ALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGEGHHDMPYTAERLKERK* |
| Ga0074063_142955921 | 3300006953 | Soil | MTKSVTTVIAVLALAAGLAAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGATLTGTISMPTQRIGTTVDVALKGEVVDAAFTLSGSVEGAKDPTTIEIKGKLNDEGMLE |
| Ga0099795_102836471 | 3300007788 | Vadose Zone Soil | MMKRVTTMIAVGALVAGLSAQHGKTDAPSLTGTWNMGLQGGHVIPVALVLKQEGGTLSGTVSMPTQRIGQTVDVALKGDVANGTLTLTGTVEGVKEPTTIAITGTLNDEGILEGTVTMGGRDGHHDMPYTAERL |
| Ga0105251_100355243 | 3300009011 | Switchgrass Rhizosphere | MTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK* |
| Ga0105243_115802782 | 3300009148 | Miscanthus Rhizosphere | MTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGEGHH |
| Ga0105242_101092911 | 3300009176 | Miscanthus Rhizosphere | TAAEQAIHGRFNRRPVACGAEETGMTKQLTTMMAVLALVGSISAQSKKAEGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK* |
| Ga0105238_105425182 | 3300009551 | Corn Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMRLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK* |
| Ga0105249_121434952 | 3300009553 | Switchgrass Rhizosphere | MTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGEGHHDMPYTAERWKERK* |
| Ga0105855_12610631 | 3300009649 | Permafrost Soil | MTTLKTIVVMVALTAGLSAQHGKGTAETPSLTGTWNMGLEGGHVIPVALVLKQDGDVLGGTISMPTQKIGQTVDVALKGGLANGAFALSGTVEGAKDPTTIEIKGKLNDEGMLEGTVTMSGRGDGHHDMPYTAERLKER |
| Ga0105854_10078763 | 3300009660 | Permafrost Soil | MTTLKTIVVMVALTAGLSAQHGKGTAETPSLTGTWNMGLEGGHVIPVALVLKQDGDVLGGTISMPTQKIGQTVDVALKGGLANGAFALSGTVEGAKDPTTIEIKGKLNDEGMLEGTVTMSGRGDGHHDMPYTAERLKERK* |
| Ga0099796_102886671 | 3300010159 | Vadose Zone Soil | EETGMTKQLTTMMAVLALVGSVSAQTKKAEGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVISMPTQKIGQTVDVALKGTLAHSSFTLTGSMEGPKEPVTIEIKGTLNDDGMLEGTVTMGGRGEGHHDMPYTAERLKERK* |
| Ga0134124_101962342 | 3300010397 | Terrestrial Soil | MTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTATISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK* |
| Ga0134122_106942852 | 3300010400 | Terrestrial Soil | MTKQLMTMMAVLALVGSVSAQSKKAEGLTGTWNMGLQGGHVIPVALVLTQDGETLTGVISMPTQKIGQTVDVSLKGTYASAAFTLSGSVEGAKEPATIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK* |
| Ga0134121_100339837 | 3300010401 | Terrestrial Soil | MTKQLMTMMAVLALVGSVSAQSKKAEGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK* |
| Ga0105246_100380561 | 3300011119 | Miscanthus Rhizosphere | IGGQRMNRTMTTMIAVLALAAGLSAQHGTTEAPSLTGRWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK* |
| Ga0150985_1013803481 | 3300012212 | Avena Fatua Rhizosphere | TLMTKVVATMITMVALAAGVAAQTKKAEGLTGTWNMGLQGGHVIPVALVLKQDGDALTGVVSMPTQKIGTTVDVALKGGIASNAFTLSGEVEGAKEPATIEITGKLTDEGMLEGTVTMGGRDASHREMPYTAERLKERSK* |
| Ga0150985_1141078861 | 3300012212 | Avena Fatua Rhizosphere | MNRTIATMVAVMALAGGLTAQHGKTGAASLTGTWNMGLEGGHVIPVALVLKQDGDALSGTISLPTQHIGQTVDVALKGEILNGAFTLSGAVESAKDPTTIDITGRLNEEGVLEGRVKMSGTQGPHGDMPYTAERLKERK* |
| Ga0150985_1166799801 | 3300012212 | Avena Fatua Rhizosphere | TGSRRTQMMTKITTMIALLALTAGLSAQKKADASLTGTWNMGLEGGHVIPVALVLKQEGDILTGTISMPTQRVGQTVDVPLNGTVTNGALALSGTVEGAKDPTTLEIKGKLNDEGIIEGRVVMSGASGPHGDMPYTAERLKERK* |
| Ga0150985_1181986352 | 3300012212 | Avena Fatua Rhizosphere | MTTAIVIVMALAVGLAAQHGKAESAGLTGTWNMGLQGGHVIPVALVLKQDGEVLTRVVSMPTQKIGQTVDVNLKGTVADGAFTVAGSVEGAKDPTNIEIKGKLTEEGMLEGRVVMSGTQGPHGDMPYTTE |
| Ga0150985_1218726102 | 3300012212 | Avena Fatua Rhizosphere | YMSKMTTMFAVLALTAALSAQKKADPGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRSGQTVDVGLKGTAVGGTLALSGTVEGAKEPTTIEIKGRLNDDGIIEGHVVMAGASAPHGEMPYTAERLKERK* |
| Ga0150984_1001369191 | 3300012469 | Avena Fatua Rhizosphere | RTLTTMVAVLALAGSLAAQAKKPDEKGLTGTWNMGLQGGHVIPVALVLKQEGDILTGTISMPTQRVGQTVDVPLNGTVTNGALALSGTVEGAKDPTTLEIKGKLNDEGIIEGRVVMSGASGPHGDMPYTAERLKERK* |
| Ga0150984_1024607081 | 3300012469 | Avena Fatua Rhizosphere | LMTKVVATMITMVALAAGVAAQTKKAEGLTGTWNMGLQGGHVIPVALVLKQDGDALTGVVSMPTQKIGTTVDVALKGGIASNAFTLSGEVEGAKEPATIEITGKLTDEGMLEGTVTMGGRDASHREMPYTAERLKERSK* |
| Ga0150984_1063080992 | 3300012469 | Avena Fatua Rhizosphere | IAVVMVMALAAGLAAQHAKAEAASLTGTWNMGLQGGHVIPVALVLKQDGEALTGVVSMPTQKIGQTVDVALKGTIAKGVFSVKGDVDNAKEPTTIEIAGKLNDDGMLEGTVTMGGQGDSHRNMPYTAERLKERK* |
| Ga0150984_1184173751 | 3300012469 | Avena Fatua Rhizosphere | TVCTLLMLAAAPFAQHDGHAADTTNLTGTWNMGLQGGHVIPVALVLKQEGTTLSGTIAMPTQPPGQTVDVDLKGSLTSGAFTLAGNVEGAKEPTSIEIKGKLNDEGTIDGTLTMNGASAHPREMPYTAERLKERK* |
| Ga0126369_105643052 | 3300012971 | Tropical Forest Soil | MPKMITMFAVLVLTAALAAQKRAEPELTGTWNMGLEGGHVIPVALVLTQEGETLTGTISLPTQRNGQTVDVGLKGKAVGGALELSGTVEGAKEPTTIEIKGRLNDEGIIEGHVVMSGASAPHGEMPYTAERLKERK* |
| Ga0157374_105834462 | 3300013296 | Miscanthus Rhizosphere | LEANRMMKSVMTTIAVVALAVGLSAQHGKKEAPSLTGTWNMGLEGGHVIPVALVLKQDGSTLTGNIAMPTQRIGTTVDVALKGEIADAAFTLSGSVEGAKDPMTIEIKGKLNDEGMLEGRVVMKGATGPHGDMPYTAERLKERGK* |
| Ga0163162_107839351 | 3300013306 | Switchgrass Rhizosphere | MSRTMTTMIAVVALAAGLSAQHGKTETPSLTGTWNMGLEGGHVIPVALVLKQDGEALTGTISMPTQRAGSTVDVALKGSIAKGTFTLSGAVEGAKEPTTIAISGTLNDEGMLAGTVSMGGRGDGHHEMPYTAERLKERK* |
| Ga0157375_108416842 | 3300013308 | Miscanthus Rhizosphere | MTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIAISGTLNDEGMLAGTVSMGGRGDGHHEMPYTAERLKERK* |
| Ga0163163_117208072 | 3300014325 | Switchgrass Rhizosphere | MNRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTV |
| Ga0182021_107069592 | 3300014502 | Fen | MTKSLTTMMAVLALAAGLSAQTKKADAQSLTGTWNMGLQGGHVIPVALVLTQDGATLTGTISMPTQKIGQTVDVALKGDVINGALTLSGSVEGAKDPTTIEIKGTLNDEGMLEGRLVMSGAQGPHGDMPYTAERLKERK* |
| Ga0157377_115750552 | 3300014745 | Miscanthus Rhizosphere | GLSAQHGKTQAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTLAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK* |
| Ga0157379_100288738 | 3300014968 | Switchgrass Rhizosphere | MTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGR |
| Ga0157379_110582252 | 3300014968 | Switchgrass Rhizosphere | LSAQSRKTDARGLTGTWNMGLQGGHVIPVALALAQDGDALTGTISMPTQRAGNTVDVALKGEIASGAFMLSGTVEGAKEPTTIKITGKLNDEGMLEGRVLMGGAEGPHGDMPYTAERLKERK* |
| Ga0157376_100067074 | 3300014969 | Miscanthus Rhizosphere | MLAVLALTAGLSAQKKADSGLSGTWNMGLEAGHVIPVALVLKQDSDALTGTISMPTQRAGQTVDVPLKGTVSNGAFTLSGTVEGAKDPTTIEIKGKLNDEGILEGRVAMSGTSGPHGDMAYTAERLKERK* |
| Ga0157376_104089902 | 3300014969 | Miscanthus Rhizosphere | MPKMTTMIAVLALTASVLAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTVDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAAHGGMPYTAERLKERK* |
| Ga0137412_107538441 | 3300015242 | Vadose Zone Soil | MTKSVTMTIAVLALAAGLSAQKKTDTSLTGTWNMGLQGGHVIPVALVLKQDGAVLTGTVSMPTQRIGQTVDIALKGDMTHGGFTLAGSMEGPKEPVTIEIKGTLNDDGMLEGTVTMGGRGDGHHDMPYTAERLK |
| Ga0132258_116403712 | 3300015371 | Arabidopsis Rhizosphere | MSKMTTMIAVLALTASVLAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTVDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAPHGGMPYTAERLKERK* |
| Ga0132258_125015192 | 3300015371 | Arabidopsis Rhizosphere | MTTMIAVVALAAGLSAQHGKTETPSLTGTWNMGLEGGHVIPVALVLKQDGEALTGTISMPTQRAGNTVDVALKGAIGKGSFTLSGTVEGAKDPTTIEITGSMNDEGMLEGRVVMTGAQGPHGNMPYTAERLKERK* |
| Ga0193728_11573812 | 3300019890 | Soil | MTKSVTTMIAVVALAVGLSAQHGKTEAPSLTGTWNMGLEGDHVIPVALVLKQDGEAVAGTVSMPTSRAGATVDVTLKGNLAHGSFTLAGSMEGPKEPVTIEIKGKLNDEGMLEGTVTMGGRGEDHHNMPYTAERLKERSK |
| Ga0193753_101348592 | 3300020034 | Soil | MKSVTMMIAVLALAVGLSAQTKKPEAQGLTGTWNMGLQGGHVIPVALVLKQDGEALTGTISMPTQRIGQTVDVALKGEIANGALTLSGTVEGAKDPTTIAITGKMNDEGMLEGTVSMSGSSGPHGDMPYTAERLKERSK |
| Ga0213853_104439842 | 3300021861 | Watersheds | MMKSVTTTIAVVALVTGLSGQHGKTDAPSLTGTWNMGLQGGHVVPVALVLEQNGEALAGTVSMPTQRIGQTVDVALKGDTVHGSFTLSGQVEGAKDPTTIEIRGKLNAEGMLEGTVTMGGRGEGHRDLPYTAERLKERGK |
| Ga0179589_105904332 | 3300024288 | Vadose Zone Soil | MMKSVMTTIAVVALAAGLSAQHGKTEAPSLTGTWNMGLQGGHVIPVALVLKQDGEAVTGTVSMPTQRIGATVDVALKGDIAHGSFTLAGSMETPKEPVTIEIKGKLNDEGMLEGTVTMGGRGEGHREMPYTAE |
| Ga0179591_11703533 | 3300024347 | Vadose Zone Soil | MEKSVTTMIAVLALAAGLSAQHGKTDSASLTGTWNMGLQGGHVIPVALVLKQDGEAVTGTVSMPTSRSGQTVDVALKGDIAHGAFTLAGSMEGPKEPVTIEIKGKLNEEGMLEGTVTMGGRGDGHHDMPYTAERLKERSK |
| Ga0207642_100308273 | 3300025899 | Miscanthus Rhizosphere | MTKQLTTMMAVLALVGSISAQSKKAEGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK |
| Ga0207680_113789761 | 3300025903 | Switchgrass Rhizosphere | MPKMTTMIAVLALTASVFAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTMDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAAHGGCPTRPNV |
| Ga0207649_103700032 | 3300025920 | Corn Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK |
| Ga0207681_108211291 | 3300025923 | Switchgrass Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGDGHHDMPYTAERLKERK |
| Ga0207694_109986181 | 3300025924 | Corn Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMRLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK |
| Ga0207694_115542222 | 3300025924 | Corn Rhizosphere | MPKMTTMIAVLALTASVFAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTVDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSG |
| Ga0207650_108138731 | 3300025925 | Switchgrass Rhizosphere | MNRTMTKTIAVLALAAGLSAQHGKTETPSLTGTWNMGLEGDHVIPVALVLKQDGEALSGTIAMPTSRAGNTVDVALKGAISKGSFTLSGTVEGAKEPTTIDISGQLNDEGMLAGKLTMGGRGEGHHDMPYTAERLKERK |
| Ga0207650_114516181 | 3300025925 | Switchgrass Rhizosphere | AGLSAQHGKTQAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTLEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK |
| Ga0207687_111392171 | 3300025927 | Miscanthus Rhizosphere | MMKSVMTTIAVVALAVGLSAQHGKKEAPSLTGTWNMGLEGGHVIPVALVLKQDGSTLTGNIAMPTQRIGTTVDVALKGEIADAAFTLSGSVEGAKDPMTIEIKGKLNDEGMLEGRVVMKGATGPHGDMPYTAERLKERGK |
| Ga0207669_108334401 | 3300025937 | Miscanthus Rhizosphere | RPSTMMAVLALVGSISAQSKKAEGLTGTWNMGLQGGHVNPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK |
| Ga0207704_105875122 | 3300025938 | Miscanthus Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGEGHHDMPYTAERLKERK |
| Ga0207704_108118601 | 3300025938 | Miscanthus Rhizosphere | MTKQLTTMIAVLALAGSVSAQTKKADGLTGTWNMGLQGGHVIPVALVLTQEGETLTGVVSMPTQKIGQTVDVPLKGTLASGAFSLSGTVEGAKDPTTIEITGKLNDEGMLEGRVV |
| Ga0207665_106745542 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MRRTMTTAMAMMALAAGLAAAESTSLTGTWNMGLQAGHVLPVALVLKQDGDAMTGVVSMPTQKIGVTVDVALKGTIAKVEFTVTGAVENAKEPTTIEIVGKLNDDGTLEGTVTMGGQGDSHRKMPYTAERLKERK |
| Ga0207689_102837642 | 3300025942 | Miscanthus Rhizosphere | MNRTMTTMIAVLALAAGLSAQHGKTQAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTVSMPTSRAGDTVDVPLKGTIAKGSFTLSGTVEGAKEPTTIAISGKLNDEGMLAGTVTMGGRGDGHRDMPYTAERLKERK |
| Ga0207689_111694301 | 3300025942 | Miscanthus Rhizosphere | MTKQLTTMIAVLALAGSVSAQTKKADGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTS |
| Ga0207679_109474412 | 3300025945 | Corn Rhizosphere | MSRTMTTMIAVLALAAGLSAQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLSGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVM |
| Ga0207658_104674682 | 3300025986 | Switchgrass Rhizosphere | MPKMTTMIAVLALTASVFAQKKADAGLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISLPTQRNGQTMDVGLKGTVTSGALELSGTVEGAKEPTTIEISGRLNDDGIIEGRVVMSGASAAHGGMPYTAERLKERK |
| Ga0207658_108743651 | 3300025986 | Switchgrass Rhizosphere | MMKSVMTTIAVVALAVGLSAQHGKKEAPSLTGTWNMGLEGGHVIPVALVLKQDGSTLTGNIAMPTQRIGTTVDVALKGEIADAAFTLSGSVEGAKDPMTIEIKGKLNDEGMLEGRVV |
| Ga0207677_102220772 | 3300026023 | Miscanthus Rhizosphere | VGLSAQHGKKEAPSLTGTWNMGLEGGHVIPVALVLKQDGSTLTGNIAMPTQRIGTTVDVALKGEIADAAFTLSGSVEGAKDPMTIEIKGKLNDEGMLEGRVVMKGATGPHGDMPYTAERLKERGK |
| Ga0207703_100443912 | 3300026035 | Switchgrass Rhizosphere | MTKQLTTMIAVLALAGSVSAQTKKADGLTGTWNMGLQGGHVIPVALVLTQEGETLTGVVSMPTQKIGQTVDVPLKGTLASGAFSLSGTVEGAKDPTTIEITGKLNDEGMLEGRVVMSGTSGPHGDMPYTAERLKERK |
| Ga0207648_100599122 | 3300026089 | Miscanthus Rhizosphere | MTKQLTTMMAVLALVGSISAQSKKAEGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGEGHHDMPYTAERLKERK |
| Ga0207648_107748071 | 3300026089 | Miscanthus Rhizosphere | MSRTMTTMIAVLALAAGLSAQHKTEASLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDISLKGTYASAAFTLSGSVEGAKEPTTIEITGKLNEEGMLEGRVVMGGTSGPHGNMPYTAERLKERK |
| Ga0207675_1026442181 | 3300026118 | Switchgrass Rhizosphere | MNRTMTTMIAVLALAAGLSAQHGKTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKEPTTIEISGKLNDEGMLAGKVTMGGRGE |
| Ga0207683_118550492 | 3300026121 | Miscanthus Rhizosphere | MSKTMTTMIAVLALAAGLSAQHGKTDTPSLTGTWNMGLEGGHVIPVALVLKQDGDVLTGTISMPTQRAGNTVDVALKGGIAKGAFTLSGTVEGAKDPTNIEIQGKLNEEGMLEGRVVMSGSQGPHGDMPYTAERLKERK |
| Ga0209901_10077012 | 3300026275 | Permafrost Soil | MTTLKTIVVMVALTAGLSAQHGKGTAETPSLTGTWNMGLEGGHVIPVALVLKQDGDVLGGTISMPTQKIGQTVDVALKGGLANGAFALSGTVEGAKDPTTIEIKGKLNDEGMLEGTVTMSGRGDGHHDMPYTAERLKERK |
| Ga0209583_100550892 | 3300027910 | Watersheds | MTKCVSTMAVVLGLAAVLSAQTKKAEGLTGTWNMGLQGGHVIPVALVLTQDGEALTGVVSMPTQKIGQTVDVALKGTLASGAFALSGTVEGAKDPTTIEITGKLNDEGMLEGRVVMGGTSGPHGDMPYTAERLKERK |
| Ga0268264_102584922 | 3300028381 | Switchgrass Rhizosphere | MSRTTTTMIAVLALAGGLSAQHGRTETPGLTGTWNMGLEGDHVIPVALVLKQDGEALQGTISMPTNRTGNTVDVALKGSIAKGTFTLSGAVEGAKETTTIEISGKLNDEGMLAGKVTMGGRGEGHHDMPYTAERLKERK |
| Ga0268264_105364242 | 3300028381 | Switchgrass Rhizosphere | MIKAMTTAIGVLALAGVLAAQSGKTDAKSLTGTWNMGLQGGHVIPVALVLKQDGESLTGTISMPTQRIGNTVDVALKGEIAHGAFTLTGAVENAKEPTTLEIAGKLNDEGMLEGTLTMVGGDASHRGMPYTAERLKERK |
| Ga0307280_101755182 | 3300028768 | Soil | MKSVTTMIAVLALVGSAATQTKKAEGLTGTWNMGLQGGHVIPVALVLKQDGDAVTGTISMPTQRIGQTVDVALKGEIAKGAFTLSGTVEGAKDPATIAITGKMNDEGMLEGMVSMSGSSGPHGDMPYTAERLKERSK |
| Ga0307503_101873412 | 3300028802 | Soil | MTKQLTTMIAVLALAGSVSAQTKKAEGLTGTWNMGLQGGHVIPVALVLKQDGEALTGVVSMPTQKIGQTIDVALKGTIADGMFTVAGSVEGAKDPTNIEIKGKLNEDGMLEGRVVMSGTSGPHGDMPYTAERLKERK |
| Ga0170824_1094608322 | 3300031231 | Forest Soil | MTGKMTTMLAVLALTAGLSAQKETASGLTGTWNMGLEVGHVIPVALVLKQDSDSLTGTISMPTQRVGQTVDVPLKGTVSNGTFTLSGTVEGAKDPTTIEIKGKLNDEGILEGRVAMSGTSGPHGDMRYTA |
| Ga0307513_109252202 | 3300031456 | Ectomycorrhiza | VTTMIAVAALAVGLSAQHGKTEAPSLTGTWNMGLQGDHVIPVALVLKQDGETVAGTVSMPTSRTGATVDVALKGNLAHGSFTLAGSMETPKEPVTIEIKGKLNDEGMLEGTVTMGGRGEGHRGMPYTAERLKERSK |
| Ga0310813_106012341 | 3300031716 | Soil | AQHGKTEAPSLTGTWNMGLEGGHVIPVALVLKQDGETLTGTISMPTQRAGNTVDVALKGGIASGAFTLTGTVEGAKDPTTIEIKGKLNDEGMLEGRVVMTGAQGPHGDMPYTAERLKERK |
| Ga0315290_117384641 | 3300031834 | Sediment | TMIAVLALAGSLSAQTKTTEAPSLTGTWNMGVQGGHVIPVALVLTQDGTMLSGTLAMPTQHPGQPVDVPLKGDVAHGTLTLSGTVENAKEPTTIEIKGNLNDDGIIEGTVAMQGHTMPYTAERL |
| Ga0315281_100132319 | 3300032163 | Sediment | MTTMMKATIATTILAVLTVATSVSAQHGGTDAPSLTGTWNMGLQGGHVVPVALVLKQNGDILTGTISMPTQRVGQPVDVSLKGDISHGTLTLTGTVESAKEPTTIGITGRLNDEGIIEGTLAMQGHDMPYTAERLKERK |
| Ga0315281_105404063 | 3300032163 | Sediment | MTMTVKTMIAVLALAGSLSAQTKTTEAPSLTGTWNMGVQGGHVIPVALVLTQDGTMLSGTIAMPTQRSGQTVDVPLKGNVTNGALTMSGTVENAKEPTTIAISGKLNDEGIIEGTLAMQGHDMPYTA |
| Ga0372943_0363595_441_860 | 3300034268 | Soil | MNKTMTTMVLVMALATGLAAQHGTTDAASLTGTWNMGLEGGHVIPVALVLEQKGDALSGTISMPTQRIGQTADVALKGELLNGTFTLSGAVEGAKDPTTIDITGRLNEDGGLEGRVKISGAQGPHGDLPYTAERLKERK |
| Ga0372943_0377817_119_538 | 3300034268 | Soil | MNKAMTTMAAILALIAGLGAQHGKSDTASLTGTWNMGLEGGHVIPVALVLKQDGDALSGTISMPTQRIGQTVDVALTGQIVEGALTLSGAVEGAKDPTTIDITGRVNEEGVLEGRVKMSGAQGPHGDLPYTAERLKERK |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |