Metagenome / Metatranscriptome Family F072626

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072626
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	56 residues
Representative Sequence	SRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAGLEAE
Number of Associated Samples	109
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.83 %
% of genes near scaffold ends (potentially truncated)	94.21 %
% of genes from short scaffolds (< 2000 bps)	93.39 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.736 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (14.876 % of family members)
Environment Ontology (ENVO)	Unclassified (28.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.628 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.90% β-sheet: 27.38% Coil/Unstructured: 60.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF02190	LON_substr_bdg	38.84
PF01470	Peptidase_C15	23.14
PF13602	ADH_zinc_N_2	3.31
PF00756	Esterase	2.48
PF00107	ADH_zinc_N	2.48
PF13442	Cytochrome_CBB3	1.65
PF05362	Lon_C	1.65
PF09594	GT87	0.83
PF13487	HD_5	0.83
PF00291	PALP	0.83
PF03703	bPH_2	0.83
PF01547	SBP_bac_1	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2039	Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)	Posttranslational modification, protein turnover, chaperones [O]	23.14
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	1.65
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	1.65
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	1.65
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	1.65
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.83
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.74 %
Unclassified	root	N/A	8.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.74 %
Unclassified	root	N/A	8.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.74 %
Unclassified	root	N/A	8.26 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.06 %
Unclassified	root	N/A	8.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.23 %
Unclassified	root	N/A	8.26 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.31 %
Unclassified	root	N/A	8.26 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	22.31 %
Unclassified	root	N/A	8.26 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.31 %
Unclassified	root	N/A	8.26 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.83 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.31 %
Unclassified	root	N/A	8.26 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.83 %
Desulfobulbus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.31 %
Unclassified	root	N/A	8.26 %
Pseudomonas sp. 71_D	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. 71_D	0.83 %
Desulfobulbus elongatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus elongatus	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT01C2AD2	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300001305\|C688J14111_10208182	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300001535\|A3PFW1_10402240	Not Available	691	Open in IMG/M
3300003321\|soilH1_10051600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3185	Open in IMG/M
3300004081\|Ga0063454_101154386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300004153\|Ga0063455_100917961	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300004479\|Ga0062595_100193191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1249	Open in IMG/M
3300005345\|Ga0070692_10267916	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005366\|Ga0070659_100633768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300005434\|Ga0070709_11182743	Not Available	614	Open in IMG/M
3300005436\|Ga0070713_100485919	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300005439\|Ga0070711_100683449	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005439\|Ga0070711_100789062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300005445\|Ga0070708_101732036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. 71_D	581	Open in IMG/M
3300005466\|Ga0070685_10501564	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005468\|Ga0070707_100674904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300005471\|Ga0070698_100702246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300005529\|Ga0070741_10897869	Not Available	766	Open in IMG/M
3300005529\|Ga0070741_11737352	Not Available	506	Open in IMG/M
3300005530\|Ga0070679_100316662	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300005538\|Ga0070731_10802197	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005540\|Ga0066697_10355485	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300005547\|Ga0070693_101144853	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005549\|Ga0070704_102139472	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005559\|Ga0066700_10701705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300005563\|Ga0068855_100974333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300005563\|Ga0068855_101230053	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005563\|Ga0068855_101998287	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005563\|Ga0068855_102098428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300005897\|Ga0075281_1032338	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005903\|Ga0075279_10006560	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300006028\|Ga0070717_11726693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300006034\|Ga0066656_10907870	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300006174\|Ga0075014_100778756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300006755\|Ga0079222_11571019	Not Available	622	Open in IMG/M
3300006791\|Ga0066653_10448656	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006796\|Ga0066665_10382023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1158	Open in IMG/M
3300006854\|Ga0075425_102827525	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300007255\|Ga0099791_10632566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300009093\|Ga0105240_12252789	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300009174\|Ga0105241_11045559	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300009551\|Ga0105238_11365984	Not Available	735	Open in IMG/M
3300010044\|Ga0126310_10639592	Not Available	798	Open in IMG/M
3300010152\|Ga0126318_10386679	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300010154\|Ga0127503_11172925	All Organisms → cellular organisms → Bacteria	2531	Open in IMG/M
3300010375\|Ga0105239_13483763	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010396\|Ga0134126_10985257	Not Available	945	Open in IMG/M
3300010399\|Ga0134127_11111572	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300010880\|Ga0126350_11603092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1444	Open in IMG/M
3300012198\|Ga0137364_11000757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300012200\|Ga0137382_10506434	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012208\|Ga0137376_11605413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300012357\|Ga0137384_10731457	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300012361\|Ga0137360_10352076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1233	Open in IMG/M
3300012363\|Ga0137390_10355957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1445	Open in IMG/M
3300012948\|Ga0126375_10721433	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012957\|Ga0164303_11153427	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012971\|Ga0126369_10488272	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300012987\|Ga0164307_11713624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300012989\|Ga0164305_10513884	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300013100\|Ga0157373_10129755	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300013763\|Ga0120179_1087349	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300013766\|Ga0120181_1136789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300015242\|Ga0137412_11297276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300018089\|Ga0187774_10982376	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300018431\|Ga0066655_11016424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300018468\|Ga0066662_10844574	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300018482\|Ga0066669_10563775	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300020069\|Ga0197907_10479910	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300020070\|Ga0206356_11816018	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300021953\|Ga0213880_10098445	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300022467\|Ga0224712_10234942	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300024310\|Ga0247681_1021201	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300024347\|Ga0179591_1010113	Not Available	2013	Open in IMG/M
3300025906\|Ga0207699_10108430	All Organisms → cellular organisms → Bacteria	1776	Open in IMG/M
3300025909\|Ga0207705_11099512	Not Available	612	Open in IMG/M
3300025910\|Ga0207684_11613055	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300025915\|Ga0207693_10077037	All Organisms → cellular organisms → Bacteria	2611	Open in IMG/M
3300025915\|Ga0207693_11043468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300025921\|Ga0207652_10154009	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300025921\|Ga0207652_10647863	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300025921\|Ga0207652_11751163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300025922\|Ga0207646_10283418	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300025922\|Ga0207646_11426530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300025928\|Ga0207700_10451816	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300025931\|Ga0207644_11617873	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300025932\|Ga0207690_11227879	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300025949\|Ga0207667_11319026	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300025949\|Ga0207667_11714851	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300025949\|Ga0207667_12191478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300026008\|Ga0208529_1017881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300026300\|Ga0209027_1036452	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300026329\|Ga0209375_1329362	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300026527\|Ga0209059_1024273	All Organisms → cellular organisms → Bacteria	2755	Open in IMG/M
3300026550\|Ga0209474_10189647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1316	Open in IMG/M
3300027842\|Ga0209580_10572519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300027869\|Ga0209579_10405323	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300027874\|Ga0209465_10645407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300027882\|Ga0209590_10939693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300027968\|Ga0209061_1128358	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300027986\|Ga0209168_10397865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300028556\|Ga0265337_1182448	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300028784\|Ga0307282_10515067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300028799\|Ga0307284_10037383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1654	Open in IMG/M
3300031249\|Ga0265339_10188049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300031341\|Ga0307418_1109849	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300031572\|Ga0318515_10433285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300031713\|Ga0318496_10787996	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300031720\|Ga0307469_11130117	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031890\|Ga0306925_10643170	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300031910\|Ga0306923_11414401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300031938\|Ga0308175_102068553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	638	Open in IMG/M
3300032074\|Ga0308173_10993834	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300032180\|Ga0307471_100126576	All Organisms → cellular organisms → Bacteria	2396	Open in IMG/M
3300032180\|Ga0307471_103676345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300032770\|Ga0335085_10007604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16732	Open in IMG/M
3300032828\|Ga0335080_10693815	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300032829\|Ga0335070_10374663	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300032897\|Ga0335071_10657405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus elongatus	999	Open in IMG/M
3300033004\|Ga0335084_10318924	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300033808\|Ga0314867_173922	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.47%
Host-Associated	Host-Associated	15.70%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.17%
Plants	Host-Associated → Plants	15.70%
Aquatic	Environmental → Aquatic	3.31%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.79%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Marine	Environmental → Aquatic → Marine	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.83%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.76%
Loam	Environmental → Terrestrial → Soil → Loam	22.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.48%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.65%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005903	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026008	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202 (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031341	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_00690560	2170459014	Switchgrass, Maize And Mischanthus Litter	MRFSRIELDATDDRPLQSRRSFLVGRYAAVVTIADGHVTRVVEYPHLGEALAAVGMQDDN
C688J14111_102081822	3300001305	Soil	VSMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHXHLEXALEAAGLXAX*
A3PFW1_104022402	3300001535	Permafrost	DERPLQSRRMYHLGRYAAIVTTRDGRVIRVDEQPSLAAALEAAGVEEEAL*
soilH1_100516003	3300003321	Sugarcane Root And Bulk Soil	IEIDPSDERPLQSRRSYLLGRWAAVVHMHDGRVTRVDEHPHLEAALEAADLEPE*
Ga0063454_1011543861	3300004081	Soil	ELDETDERPLQSRRSYLVGRYAAIVTIRDGRVTRVVEHPHLAAALDAAGVEDA*
Ga0063455_1009179612	3300004153	Soil	DPSDERPLQTRRTYLVGRYAAIVTTRDGHVVRVEEHPHLASALEALGVEDEVA*
Ga0062595_1001931911	3300004479	Soil	DPSDERPLQSRRSYLLGRWAAVVHVRDGRVVRVEEHPHLAAALESAGLEDEVA*
Ga0070692_102679162	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAEIDAE*
Ga0070659_1006337681	3300005366	Corn Rhizosphere	MRFSRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAE*
Ga0070709_111827431	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SRIELDPTDDRPLQSRRSFLVGRYAAIVTTRSGRVARVVEYPHLTAALAAAGLEDENP*
Ga0070713_1004859191	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAGLEAE
Ga0070711_1006834491	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LDPSDERPLQSRRSYLLGRWAAVVFIRDGRVVRVEEHPHLEAALEAAGLEDEVA*
Ga0070711_1007890622	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RFSRIEPDETDERPLQSRRFYLVGRYAAVVTTHDGRVARVEEHPHLGSALEAVGLEDQ*
Ga0070708_1017320361	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHLHLEAALEAAGLEAE*
Ga0070685_105015642	3300005466	Switchgrass Rhizosphere	LDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLDAE*
Ga0070707_1006749041	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVSMRFSRVEADPTDERPLQSRRYYLVGRYAAVVTMRDGRVVRVEEHPHLASALEAVGVEDEVA*
Ga0070698_1007022462	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TDERPLQSRRTYLVGRYAAVVTMRDGRVTRVEEHPHLASALEAVGLEDE*
Ga0070741_108978692	3300005529	Surface Soil	VEMDETDERPLQTRRSFLVGRYAAIVTTQGERVQRVVEYPHLQAALAAAGLEDENP*
Ga0070741_117373521	3300005529	Surface Soil	RTEADPTDERPLQSRRTYHVGRYAAIVTTRDGRVVRVDEYPSLAAALDAAGVEDEVA*
Ga0070679_1003166623	3300005530	Corn Rhizosphere	MRFSRVETDPTDERPLQSRRSYLVGRYAAIVTMHDGRVARVVEYPHIAGALAAVGLDEEAT*
Ga0070731_108021971	3300005538	Surface Soil	RFSRMEVDPTDERPLQSRHSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALAAAGLEAE*
Ga0066697_103554852	3300005540	Soil	FSRIEIDPSDERPLQSRRSYLLGRWAAVVYMRRGRVVRVEEHPHLEAALEAAGVDGE*
Ga0070693_1011448531	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VELDPTDERPLQSRRSYHLGRYAAIVTLNDGRVRRVVEYPHLAGALAAVGMEDDNP*
Ga0070704_1021394722	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VSMRFSRIELDPSDVRPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLDAE*
Ga0066700_107017052	3300005559	Soil	ETDPTDERPLQSRRSYLVGRYAAIVTMHDGRVTRVVEYPHLAGALAAADLDEDAT*
Ga0068855_1009743332	3300005563	Corn Rhizosphere	DERPLQSRRSYLVGRYAAVVTMQEGRVTRVVEYPHIAGALAAVGLDEDAT*
Ga0068855_1012300532	3300005563	Corn Rhizosphere	SMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAE
Ga0068855_1019982872	3300005563	Corn Rhizosphere	SRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLESALEAAGLEAE*
Ga0068855_1020984282	3300005563	Corn Rhizosphere	DERPLQSRRSFLVGRYAAIVSMREGHVARVVEYPHLAGALAAVGLEDENP*
Ga0075281_10323383	3300005897	Rice Paddy Soil	SMRFSRIEPDETDERPLQSRRYYLVGRYAAVVTTREGRVARVEEHPHLDAALEAAGLEDQ
Ga0075279_100065601	3300005903	Rice Paddy Soil	DERPLQSRRSYLLGRYAAIVHTRQGRVVRVEEHPHLASALEAVGLEDEQA*
Ga0070717_117266932	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LDPTDERPLQSRRSFLVGRYAAVVTIAEGRVARVVEYPHLSAALEAVGVQDDNP*
Ga0066656_109078701	3300006034	Soil	SRIEIDPSDERPLQSRRSYLLGRWAAVVHTRDGRVVRVEEHPHLESALEAADLGTE*
Ga0075014_1007787561	3300006174	Watersheds	PFQSRRSYLLGRYAAIVTATDGRVLRVEEYPHLAAALEAAGLAEDEV*
Ga0079222_115710191	3300006755	Agricultural Soil	TELDPTDERPLQSRRSFLVGRYAAIVTTHDGRVSRVVEYPHLAGALEAAGLEDENP*
Ga0066653_104486561	3300006791	Soil	RIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLESALEAAGLEAE*
Ga0066665_103820232	3300006796	Soil	AADDRPLQSRRYYLVGRYAPIVTTRQGRVTRVEEHAHLAGALAAVGLEDENP*
Ga0075425_1028275251	3300006854	Populus Rhizosphere	SMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLESALQAAGLEAQ
Ga0099791_106325661	3300007255	Vadose Zone Soil	VEIDPTDDRPLQSRRSFLVGRYAAIVTTRDGRVARVVEYPHLAGALAAAGLEDENP*
Ga0105240_122527891	3300009093	Corn Rhizosphere	DPSDARPLQSRRSYILGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLDAE*
Ga0105241_110455591	3300009174	Corn Rhizosphere	IELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAGLEAP*
Ga0105238_113659841	3300009551	Corn Rhizosphere	ELDATDERPLQSRRSYLVGRYAAVVTVSDGRVARVVEYPHLAGALAAVGLDEEDA*
Ga0126310_106395922	3300010044	Serpentine Soil	TADERPLQSRRSYLVGRYAAIVTMRDGHVARVVEYPHLQGALAAAGLEDENP*
Ga0126318_103866792	3300010152	Soil	SRIEIDPSDERPLQSRRSYLLGRWAAVVHMHDGRVTRVDEHPHLEAALEAADLEPE*
Ga0127503_111729251	3300010154	Soil	DRVVVSMRFSRIALDPSDERPLQSRRSYLLGRCAAVVYMCDGRVVRVEEHPHLEAAL*
Ga0105239_134837632	3300010375	Corn Rhizosphere	SRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLDAE*
Ga0134126_109852573	3300010396	Terrestrial Soil	LQSRRSFLVGRYAAIVTMNDGRVARVVEYPHLAGALAAAGLEDENP*
Ga0134127_111115722	3300010399	Terrestrial Soil	DPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLDAE*
Ga0126350_116030923	3300010880	Boreal Forest Soil	RIEPDETDERPLQSRRFYLVGRYAAVVTTHEGRVARVEEHPHLVAALAAVGLEDEVA*
Ga0137364_110007571	3300012198	Vadose Zone Soil	MRFSRIETDPTDERPLQSRRSYLVGRYAAIVTMHDGRVTRVVEYPHLAGALAAAGLDEDAT*
Ga0137382_105064342	3300012200	Vadose Zone Soil	ELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAQ*
Ga0137376_116054132	3300012208	Vadose Zone Soil	TDERPLQSRRSYLVGRYAAIVTMHEGHVTRVVEYPHLAGALAAAGLDEDAT*
Ga0137384_107314571	3300012357	Vadose Zone Soil	SRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHLHLEAALEAAGLEAE*
Ga0137360_103520761	3300012361	Vadose Zone Soil	LARFSRIEPDETDERPLQSRRFYLVGRYAAVVTTHDGRVARVEEHPHLSSALEAVGIEDEVV*
Ga0137390_103559571	3300012363	Vadose Zone Soil	DPTDDRPLQSRRTYHVGRYAAIVTMRDGHVVRVDEHPTLAAALEAAGVEDEVA*
Ga0126375_107214332	3300012948	Tropical Forest Soil	FSRIEIDPSDERLLQSRRSFLLGRWAAVVFFRDGRVVRVEEHPHLEAALQAADLDAE*
Ga0164303_111534272	3300012957	Soil	SRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAGLEAE*
Ga0126369_104882722	3300012971	Tropical Forest Soil	RIEIDLTDERPLQSRRSYLLGRWAAVVYTRDGHVVRVEEHPHLEAALEAAGLEGE*
Ga0164307_117136241	3300012987	Soil	DRPLQSRRSYLVGRYAAIVTMHDGRVTRVVEYPHLAGALAAADLDEDAT*
Ga0164305_105138842	3300012989	Soil	FSRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAE*
Ga0157373_101297553	3300013100	Corn Rhizosphere	SMRFSRIELDATDERPLQSRRSYLVGRYAAVVTVSDGRVARVVEYPHLAGALAAVGLEEADA*
Ga0120179_10873491	3300013763	Permafrost	SEVYGPLQSRRSFLVGRYAAIVTTRDGRVARVVEYPHLAGALAAAGLEDENP*
Ga0120181_11367892	3300013766	Permafrost	TDERPLQSRRSYLVGRYAAIVTMHDGRVTRVVEYPHLAGALAAADLDEDAT*
Ga0137412_112972761	3300015242	Vadose Zone Soil	DSTDERPLQSRRSFLVGRYAAIVTMRDGRVTRVVEHPHLTSALAAVGLEDENL*
Ga0187774_109823761	3300018089	Tropical Peatland	VSMRFSRIEIDPTDERPLQSRRSYLLGRWAAVVHTRDGRVVRVEEHPHLEAALEAAGLEG
Ga0066655_110164242	3300018431	Grasslands Soil	PLQSRRSYLVGRYAAIVTMHEGRVTRVVEYPHLAGALAAAGLDEDAT
Ga0066662_108445741	3300018468	Grasslands Soil	RIKIDPSDERPLQSRRSYLLGRWAAVVHTRDGRVVRVEEHPHLESALEAADLGTE
Ga0066669_105637752	3300018482	Grasslands Soil	DPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLESALEAAGLDAE
Ga0197907_104799103	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	DATDERPLQSRRSYLVGRYAAVVTVSDGRVARVVEYPHLAGALAAVGLEEADA
Ga0206356_118160181	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	TDPTDERPLQSRRSYLLGRWAGLVFMRGGRVVRVEEYPHLDAALEAAGLEAE
Ga0213880_100984451	3300021953	Exposed Rock	FSRVEVDPTDERPLQSRRSYLLGRWAGLVFIRDGRVVRVEEYPHLEAALEAAGIEDDHH
Ga0224712_102349422	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VSMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAEIDA
Ga0247681_10212012	3300024310	Soil	EVDPADERPLQSRRSYLLGRWAAVVHVRDGRVVRVEEHPHLESALEAAGLEAE
Ga0179591_10101135	3300024347	Vadose Zone Soil	EADPTDERPLQSRRTYHVGRYAAIVTTRDGHVVRVDEQPSLAAALEAAGVEDEAF
Ga0207699_101084303	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	SRIEPDATDERPLQSRRFYLVGRYAAVVTTHEGRVARVEEHPHLGAALAAVGLEDEVA
Ga0207705_110995122	3300025909	Corn Rhizosphere	TDERPLQSRRSFLVGRYAAIVTTHDGRVSRVVEYPHLAGALAAVGLEEADA
Ga0207684_116130551	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VVVSMRFSRIELDPSDVRPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAE
Ga0207693_100770374	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DPTDDRPLQSRRTYLVGRYAAIVTTRDGRVVRVDEQPSLAAALEAAGVEEETL
Ga0207693_110434681	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ERPLQSRRSYLVGRYAAIVTMHDGRVARVVEYPHIAGALAAVGLDEEAT
Ga0207652_101540093	3300025921	Corn Rhizosphere	RPLQSRRSFLVGRYAAIVTTHDGRVSRVVEYPHLAGALAAAGLEDENP
Ga0207652_106478632	3300025921	Corn Rhizosphere	SRIEIDPSDERPLQSRRSYLLGRWAAVVHTRDGRVVRVEEHPHLESALEAADLETE
Ga0207652_117511632	3300025921	Corn Rhizosphere	DERPLQSRRSFLVGRYAAIVTMRDGRVVRVVEYPHLTGALAAVGLEDENP
Ga0207646_102834183	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RFSRVEADPTDDRPLQSRRTYLVGRYAAVVTMRDGHVTRVEEHPHLGAALAAVGLEDE
Ga0207646_114265302	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSMRFSRVEADPTDERPLQSRRYYLVGRYAAVVTMHDGRVVRVEEHPHLASALEAVGVEDEVA
Ga0207700_104518161	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VVVSMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAGLEAE
Ga0207644_116178731	3300025931	Switchgrass Rhizosphere	VVSMRFSRIELDPSDDRPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAGLEAP
Ga0207690_112278791	3300025932	Corn Rhizosphere	VVSMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHSHLEAALEAAEIDAE
Ga0207667_113190262	3300025949	Corn Rhizosphere	MRFSRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAE
Ga0207667_117148512	3300025949	Corn Rhizosphere	SMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLESALEAAGLEAE
Ga0207667_121914781	3300025949	Corn Rhizosphere	MRFSRTEVDPTDERPLQSRRSFLVGRYAAIVTTHDGRVSRVVEYPHLAGALEAAGLEDEN
Ga0208529_10178812	3300026008	Rice Paddy Soil	VEADPTDERPLQSRRSYLLGRWAAIVYARDGRVVRVEEHPHLESALEAVGIEDEHA
Ga0209027_10364522	3300026300	Grasslands Soil	LPFDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAQ
Ga0209375_13293622	3300026329	Soil	ELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAQ
Ga0209059_10242734	3300026527	Soil	PTDERPLQSRRSYLVGRYAAIVTMHEGRVTRVVEYPHLAGALAAAGLDEDAT
Ga0209474_101896471	3300026550	Soil	PLQSRRSFLVGRYAAIVTTHDGRVSRVVEYPHLAGALEAAGLEDENP
Ga0209580_105725192	3300027842	Surface Soil	FSRIEPDETDDRPLQSRRFYLVGRYAAVVTTHEGRVARVEEHPHLGAALAAVGLEDEVA
Ga0209579_104053232	3300027869	Surface Soil	RFSRMEVDPTDERPLQSRHSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALAAAGLEAE
Ga0209465_106454071	3300027874	Tropical Forest Soil	MRFSRVELDPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGLEAE
Ga0209590_109396932	3300027882	Vadose Zone Soil	VSMRFSRVEADPADERPLQSRRYYLVGRYAAIVTMHEGRVVRVEEHPHLAAALAAAGLEDEVV
Ga0209061_11283582	3300027968	Surface Soil	SRVEPDPTDERPLQSRRSYLLGRWAAIVHAREGRVVRVEEHPHLESALEAVGIQE
Ga0209168_103978651	3300027986	Surface Soil	SRIEPDETDERPLQSRRFYLVGRYAAVVTTHEGRVARVEEHPHLESALSAVGLEDQ
Ga0265337_11824481	3300028556	Rhizosphere	DPTDERPLQSRRMYLVGRYAAIVTMRDGRVVRVDEQPSLAAALEAAGVEDEVL
Ga0307282_105150671	3300028784	Soil	VETDPTDERPLQSRRSYLVGRYAAIVTMHEGRVTRVVEYPHLAGALAAADLDEDAT
Ga0307284_100373833	3300028799	Soil	DPTDERPLQSRRSFLVGRYAAIVTMRDGRVTRVVEYPHLASALAAVGLEDENP
Ga0265339_101880491	3300031249	Rhizosphere	PDETDERPLQSRRYYLVGRYAAVVTTRDGRVARVEEHPHLGAALAAVGLEDEVG
Ga0307418_11098491	3300031341	Salt Marsh	RFSRVEADPTDGRPLQSRRSYLLGRYAAVVHMRDGRVTRVEEHPHLQAALAAEGLEDDNP
Ga0318515_104332851	3300031572	Soil	MRFSRVEPDITDERPLQSRRRYLVGRYAAVVHTRDARVVRVEEHPHLASALDAVGLEDEV
Ga0318496_107879962	3300031713	Soil	VSMRFSRIELDSSDERPLQSRRSYLLGRWAAVVYMRDARVVRVEEHPHLEAALEAAELEV
Ga0307469_111301172	3300031720	Hardwood Forest Soil	ELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLESALQAAGLEAQ
Ga0306925_106431702	3300031890	Soil	DPSDERPLQSRRSYLLGRWAAVVYMRDGRVVRVEEHPHLEAALEAAGIEAE
Ga0306923_114144012	3300031910	Soil	QTDERPLQSRRFYLVGRYAAVVTTHEGRVARVEEHPHLGSALAAVGLEDEVV
Ga0308175_1020685531	3300031938	Soil	PLQSRRSFLVGRYAAVVTIADGRVARVVEYPHLAAALDAVGVQDDNP
Ga0308173_109938341	3300032074	Soil	FSRTEVDPSDERPLQSRRSYLLGRWAAVVHFRDGRVVRVEEHPHLESALEAAGLWVE
Ga0307471_1001265761	3300032180	Hardwood Forest Soil	VVSMRFSRIELDPSDERPLQSRRSYLLGRWAAVVYTRDGRVVRVEEHPHLEAALEAAGLEAP
Ga0307471_1036763451	3300032180	Hardwood Forest Soil	ETDPTDERPLQSRRSYLVGRYAAIVTMHDGRVTRVVEYPHLAGALAAADLDEDAT
Ga0335085_100076041	3300032770	Soil	RDERLLQSRRSYLLGRYSAIVHMLDGRVSRVEEHPHLASALAAVGLADDISL
Ga0335080_106938153	3300032828	Soil	DPTDDRPLQSRRAYLVGRYAAIVTMRDGRVVRVEEHPHLASALEAAGLEDEVA
Ga0335070_103746633	3300032829	Soil	VSMRFSRVEPDPTDDRPLQSRRTYLVGRYAAIVTMRDGRVVRVEEHPHLASALETVGLEDEVA
Ga0335071_106574052	3300032897	Soil	PTDDRPLQSRRTYLVGRYAAIVTARDGRVVRVEEHPHLAAALEAAGLEDDGG
Ga0335084_103189241	3300033004	Soil	RFSRVEADPTDERPLQSRRTYLVGRYAAIVTARDGRVVRVEEHPHLAAALEAAGLEDDGG
Ga0314867_173922_20_205	3300033808	Peatland	MRFSRSEADPTDERPLQSRRTYLVGRYAAIVTARDGRVARVEEYPHLAAALEAAGLEDEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072626

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences